CmoCh05G013020 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCCCCCCCCCCTCTCTCTCCAAACCCAGCATAAACTGTCCCATTGCTAATTGGGGAACCCAGATGGAGGATTAAAACACATCGAGCCAATGCAAATCATCCAAACCCATCTCCCGTAGCACTGATTTTTTGGAGCTGAGCGTTTCGAATCTTTTGTTGATTTCTTTTTCTCTTCGTCAAAGATTTTGTGTAGCCACGGGGGAACGAAGATGCCGCGGCCAGGCCCGAGACCGTACGAGTGCGTGCGGAGAGCTTGGCACAGCGATAGGCACCAACCCATGAGAGGTTCCATTATTCAGCAAATTTTCAGGTTCTGGGTCTTGTTTAATTTTACTGATTCTCTTCGACTTTGATTCTGTATTTTTCACATTTTGATGAATTTGCACACCATGTGTTTGATCAGGGTTGTCAATGAGAATCATACTCCTGCTACTAAGAAGAACAAGGAATGGCAGGAGAAATTGCCGATTGTTGTTTTGAAAGCTGAAGAAATCATGTATTCTAAAGCTAATTCCGAGGTATTTTTTCCCCCCTTAACCCTTGCGTCTTGTTCATAATTCGGATCTTGTCATGTTTCATCCCCGTGATTTGCTTAGGCTGAGTACATGAATCTTGAAACGCTTTGGGATCGTTTAAATGATGCTGTTAACACCATAATTCGTAGAGATGAAACCACTGAAAGTGGTGACCGTTTGCCTCCATGTGTTGAAGGTAAAAACATTCTTGCATTTCAAGTTCTTGACTCTTATAGGAAATGCATTAGGTTTAGTTTGTTCTTTGTCATCTGTTTGTATGAACACAAGCCATTAGTCATACCTGTTTTGTCTTTCTTTGCTGCTTCTCTGTGGAATTCAGCTGCACTTAACCTCGGTTGCGTCCCGGTACGAGCATCTAGAAGCCAACGGCATAGTAACCCAAGGACTTATCTTACTCCAAGGGGACAAGAACCCACATTGGATAAAGCTACCGACGAAAGACGCCTACCGACATCGTCGCTACACCCTGCCAACCAGTTGAACTTTGCAAGAGCCAAGACTATGAACCCCAAACAACATAACAACCCCACCATTCCAAGTAACCCTGCCTTCTTGCTTGAGAATGTCCCAGTTGTTCATAACAGTTATTCAATGACTGAGACCAATACCCCACTTAACTTGGGATCTGTTTATCCATTGTATTATGGATTTCGTTGTCCAACTGAAGAGCGCAACTTAGGCTCCCAGATTTCTGCGGATGCCAACCAACAGACTATATTTTTGGGTAGACCGATCGTATCAAGTACCGAGCTGCCTGCTGAGCACTGCCTTCGTTCGTGCAAAACGAGCAATGCTATGAGCAGATTTCCACCAGAAGTTATCACAGCCAGAGAAGAAAAGCTACCAGACACAGAATGTGATTTATCTTTGAGGTTGGGTTTACCTTCCCAGCCATGTGTGAGCAGTAGGAAAGCTTGGGCTCTTGAAACTGGGGACATTGCTCCAAGCATTTCCCACGAGACGCACAAATTTCACGATCAAACCATTTACGCGAATAAAGAGTTCAGTTTTTTCCCAAGCAGAACTGCATTTGACTCCTTCGGTTCCTGTTCAAATATGTGGAGTTCAGATGGCAGGGGTCGGAATCCAGAATCTTCCACAAAAAAACGCAAAGATCCCTTTAGTAGCAATGAGGAGGACGAACCTTTTTGTTTGCCACCCGAGGTTCCATCTTACTGGTTTAACAGTCAAACTAAAGGGTCAGGTTTGTAGACAGTTTTTTCCATATCGTGGCATATAAGATCGGAAATTTTAACGTTTCCCATGATGTCGTATTGTCACCAATGAGAACTATTCCTTTTGTAGCTTTAGTTGAAATTTTATAATATTTGAGTCTCAACTACCCAACTGTATAATTAGAGTTCAGGCCCTCCAAACATGTGAGGTGTGACATTGAGCTGAGTGAATCATTAACCAACATGGTTAGAATGGAAATCCGAATAGTTAACTACGAACGGTTAGGCACATAACTAATACAACAATAGAAATGAATTCAACCTTGAGTTGCAAGTTCTTTTGTGCTACATGAGAATTACTTTTCATGAACTGTGATACCGTGCTGTTTATGCTCGTTGAGAATAAGATCATCTTCTCTGCCTTCTCTGAGACCCAATGTATTGAATTCCTTGGTGTTCATCTTTTTTGGTATTCGTGACATGCTTCCATTACTTACAATAGTAAACCGGACACTTCCAGCATTGTAACTCGGGGAGCAGGGTAGGGAAGTTATCGCTTCAACGCCTTTTCTGTTTAGTCATATGCTAAGAATACTAGGAATTTCTACAGCTGTTCGTTCATCAATCTGGTAAAATGCCTACGTTATATGAATAAATTTGAATATTCGTGTGGTTACGAGGTCGAACTTTAGTACCATTTATCTAATATATGAAATATCTTATACATTAGACTATTTTTCCCATGTTTTTTTGGCAGGTTCCTTTATCCTAATACATACTCATTTCAATATATCACACGACAGGGCACACACTGATATACGTACACGTATGTGTATATTCGTGAAACGAGAGCTTAGGGTCACCTTGCTTGAATCCATATTTATTCTTTTCCCAGTTACATGGCTTAACTTGTTGTAATGTATATTGAGAGCCAATATCACAACTTCCAAACTGGGATGCGTTTTCGATATTTTGTTGATTCATGTACTTAAATTTGCTTGCCTCGTGTGGTTCAAATACTTTGATTAACTATTTTTGTCATAGGATTAGGATTGTTCTTATCAATAGAATATTAAAATAATTGCTTTCTTTCATAGAGGATGTCCTGTATCTCACTCTGGGCTGCTGA CCCCCCCCCCCTCTCTCTCCAAACCCAGCATAAACTGTCCCATTGCTAATTGGGGAACCCAGATGGAGGATTAAAACACATCGAGCCAATGCAAATCATCCAAACCCATCTCCCGTAGCACTGATTTTTTGGAGCTGAGCGTTTCGAATCTTTTGTTGATTTCTTTTTCTCTTCGTCAAAGATTTTGTGTAGCCACGGGGGAACGAAGATGCCGCGGCCAGGCCCGAGACCGTACGAGTGCGTGCGGAGAGCTTGGCACAGCGATAGGCACCAACCCATGAGAGGTTCCATTATTCAGCAAATTTTCAGGGTTGTCAATGAGAATCATACTCCTGCTACTAAGAAGAACAAGGAATGGCAGGAGAAATTGCCGATTGTTGTTTTGAAAGCTGAAGAAATCATGTATTCTAAAGCTAATTCCGAGGCTGAGTACATGAATCTTGAAACGCTTTGGGATCGTTTAAATGATGCTGTTAACACCATAATTCGTAGAGATGAAACCACTGAAAGTGGTGACCGTTTGCCTCCATGTGTTGAAGCTGCACTTAACCTCGGTTGCGTCCCGGTACGAGCATCTAGAAGCCAACGGCATAGTAACCCAAGGACTTATCTTACTCCAAGGGGACAAGAACCCACATTGGATAAAGCTACCGACGAAAGACGCCTACCGACATCGTCGCTACACCCTGCCAACCAGTTGAACTTTGCAAGAGCCAAGACTATGAACCCCAAACAACATAACAACCCCACCATTCCAAGTAACCCTGCCTTCTTGCTTGAGAATGTCCCAGTTGTTCATAACAGTTATTCAATGACTGAGACCAATACCCCACTTAACTTGGGATCTGTTTATCCATTGTATTATGGATTTCGTTGTCCAACTGAAGAGCGCAACTTAGGCTCCCAGATTTCTGCGGATGCCAACCAACAGACTATATTTTTGGGTAGACCGATCGTATCAAGTACCGAGCTGCCTGCTGAGCACTGCCTTCGTTCGTGCAAAACGAGCAATGCTATGAGCAGATTTCCACCAGAAGTTATCACAGCCAGAGAAGAAAAGCTACCAGACACAGAATGTGATTTATCTTTGAGGTTGGGTTTACCTTCCCAGCCATGTGTGAGCAGTAGGAAAGCTTGGGCTCTTGAAACTGGGGACATTGCTCCAAGCATTTCCCACGAGACGCACAAATTTCACGATCAAACCATTTACGCGAATAAAGAGTTCAGTTTTTTCCCAAGCAGAACTGCATTTGACTCCTTCGGTTCCTGTTCAAATATGTGGAGTTCAGATGGCAGGGGTCGGAATCCAGAATCTTCCACAAAAAAACGCAAAGATCCCTTTAGTAGCAATGAGGAGGACGAACCTTTTTGTTTGCCACCCGAGGTTCCATCTTACTGGTTTAACAGTCAAACTAAAGGGTCAGAGGATGTCCTGTATCTCACTCTGGGCTGCTGA ATGCCGCGGCCAGGCCCGAGACCGTACGAGTGCGTGCGGAGAGCTTGGCACAGCGATAGGCACCAACCCATGAGAGGTTCCATTATTCAGCAAATTTTCAGGGTTGTCAATGAGAATCATACTCCTGCTACTAAGAAGAACAAGGAATGGCAGGAGAAATTGCCGATTGTTGTTTTGAAAGCTGAAGAAATCATGTATTCTAAAGCTAATTCCGAGGCTGAGTACATGAATCTTGAAACGCTTTGGGATCGTTTAAATGATGCTGTTAACACCATAATTCGTAGAGATGAAACCACTGAAAGTGGTGACCGTTTGCCTCCATGTGTTGAAGCTGCACTTAACCTCGGTTGCGTCCCGGTACGAGCATCTAGAAGCCAACGGCATAGTAACCCAAGGACTTATCTTACTCCAAGGGGACAAGAACCCACATTGGATAAAGCTACCGACGAAAGACGCCTACCGACATCGTCGCTACACCCTGCCAACCAGTTGAACTTTGCAAGAGCCAAGACTATGAACCCCAAACAACATAACAACCCCACCATTCCAAGTAACCCTGCCTTCTTGCTTGAGAATGTCCCAGTTGTTCATAACAGTTATTCAATGACTGAGACCAATACCCCACTTAACTTGGGATCTGTTTATCCATTGTATTATGGATTTCGTTGTCCAACTGAAGAGCGCAACTTAGGCTCCCAGATTTCTGCGGATGCCAACCAACAGACTATATTTTTGGGTAGACCGATCGTATCAAGTACCGAGCTGCCTGCTGAGCACTGCCTTCGTTCGTGCAAAACGAGCAATGCTATGAGCAGATTTCCACCAGAAGTTATCACAGCCAGAGAAGAAAAGCTACCAGACACAGAATGTGATTTATCTTTGAGGTTGGGTTTACCTTCCCAGCCATGTGTGAGCAGTAGGAAAGCTTGGGCTCTTGAAACTGGGGACATTGCTCCAAGCATTTCCCACGAGACGCACAAATTTCACGATCAAACCATTTACGCGAATAAAGAGTTCAGTTTTTTCCCAAGCAGAACTGCATTTGACTCCTTCGGTTCCTGTTCAAATATGTGGAGTTCAGATGGCAGGGGTCGGAATCCAGAATCTTCCACAAAAAAACGCAAAGATCCCTTTAGTAGCAATGAGGAGGACGAACCTTTTTGTTTGCCACCCGAGGTTCCATCTTACTGGTTTAACAGTCAAACTAAAGGGTCAGAGGATGTCCTGTATCTCACTCTGGGCTGCTGA MPRPGPRPYECVRRAWHSDRHQPMRGSIIQQIFRVVNENHTPATKKNKEWQEKLPIVVLKAEEIMYSKANSEAEYMNLETLWDRLNDAVNTIIRRDETTESGDRLPPCVEAALNLGCVPVRASRSQRHSNPRTYLTPRGQEPTLDKATDERRLPTSSLHPANQLNFARAKTMNPKQHNNPTIPSNPAFLLENVPVVHNSYSMTETNTPLNLGSVYPLYYGFRCPTEERNLGSQISADANQQTIFLGRPIVSSTELPAEHCLRSCKTSNAMSRFPPEVITAREEKLPDTECDLSLRLGLPSQPCVSSRKAWALETGDIAPSISHETHKFHDQTIYANKEFSFFPSRTAFDSFGSCSNMWSSDGRGRNPESSTKKRKDPFSSNEEDEPFCLPPEVPSYWFNSQTKGSEDVLYLTLGC Homology
BLAST of CmoCh05G013020 vs. ExPASy TrEMBL
Match: A0A6J1G4U7 (uncharacterized protein LOC111450801 OS=Cucurbita moschata OX=3662 GN=LOC111450801 PE=4 SV=1) HSP 1 Score: 834.3 bits (2154), Expect = 2.2e-238 Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0
BLAST of CmoCh05G013020 vs. ExPASy TrEMBL
Match: A0A6J1KCA9 (uncharacterized protein LOC111493626 OS=Cucurbita maxima OX=3661 GN=LOC111493626 PE=4 SV=1) HSP 1 Score: 805.1 bits (2078), Expect = 1.4e-229 Identity = 392/405 (96.79%), Postives = 394/405 (97.28%), Query Frame = 0
BLAST of CmoCh05G013020 vs. ExPASy TrEMBL
Match: A0A0A0LF84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G007390 PE=4 SV=1) HSP 1 Score: 713.8 bits (1841), Expect = 4.3e-202 Identity = 354/422 (83.89%), Postives = 374/422 (88.63%), Query Frame = 0
BLAST of CmoCh05G013020 vs. ExPASy TrEMBL
Match: A0A5A7V7I5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00770 PE=4 SV=1) HSP 1 Score: 702.6 bits (1812), Expect = 9.9e-199 Identity = 350/422 (82.94%), Postives = 373/422 (88.39%), Query Frame = 0
BLAST of CmoCh05G013020 vs. ExPASy TrEMBL
Match: A0A1S3C5I4 (uncharacterized protein LOC103496707 OS=Cucumis melo OX=3656 GN=LOC103496707 PE=4 SV=1) HSP 1 Score: 702.6 bits (1812), Expect = 9.9e-199 Identity = 350/422 (82.94%), Postives = 373/422 (88.39%), Query Frame = 0
BLAST of CmoCh05G013020 vs. NCBI nr
Match: XP_022946867.1 (uncharacterized protein LOC111450801 [Cucurbita moschata]) HSP 1 Score: 834.3 bits (2154), Expect = 4.5e-238 Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0
BLAST of CmoCh05G013020 vs. NCBI nr
Match: KAG6599389.1 (hypothetical protein SDJN03_09167, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 820.5 bits (2118), Expect = 6.7e-234 Identity = 399/405 (98.52%), Postives = 400/405 (98.77%), Query Frame = 0
BLAST of CmoCh05G013020 vs. NCBI nr
Match: XP_023545836.1 (uncharacterized protein LOC111805152 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 808.9 bits (2088), Expect = 2.0e-230 Identity = 394/405 (97.28%), Postives = 396/405 (97.78%), Query Frame = 0
BLAST of CmoCh05G013020 vs. NCBI nr
Match: XP_022999161.1 (uncharacterized protein LOC111493626 [Cucurbita maxima]) HSP 1 Score: 805.1 bits (2078), Expect = 2.9e-229 Identity = 392/405 (96.79%), Postives = 394/405 (97.28%), Query Frame = 0
BLAST of CmoCh05G013020 vs. NCBI nr
Match: KAG7030375.1 (hypothetical protein SDJN02_08722 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 790.4 bits (2040), Expect = 7.4e-225 Identity = 395/453 (87.20%), Postives = 397/453 (87.64%), Query Frame = 0
BLAST of CmoCh05G013020 vs. TAIR 10
Match: AT3G24150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32295.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 261.9 bits (668), Expect = 8.6e-70 Identity = 149/318 (46.86%), Postives = 196/318 (61.64%), Query Frame = 0
BLAST of CmoCh05G013020 vs. TAIR 10
Match: AT4G32295.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 220.7 bits (561), Expect = 2.2e-57 Identity = 126/251 (50.20%), Postives = 166/251 (66.14%), Query Frame = 0
BLAST of CmoCh05G013020 vs. TAIR 10
Match: AT4G32295.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 34 Blast hits to 34 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 110.5 bits (275), Expect = 3.2e-24 Identity = 77/187 (41.18%), Postives = 107/187 (57.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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