Homology
BLAST of CmoCh05G012720 vs. ExPASy Swiss-Prot
Match:
Q9LNC5 (110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Arabidopsis thaliana OX=3702 GN=CLO PE=1 SV=1)
HSP 1 Score: 1752.3 bits (4537), Expect = 0.0e+00
Identity = 864/988 (87.45%), Postives = 929/988 (94.03%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
M+ SLYDEFGNY+GPEI+SD+DSD E EDEDL +K ++ G SDGE G SNGWITT N
Sbjct: 1 MESSLYDEFGNYVGPEIESDRDSDDEVEDEDLQDKHLEENG-SDGEQGPGGSNGWITTIN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 278
DV+M+NQIVL EDKKYYPTAEEVYG+DVETLVMDEDE PLEQPIIKPVR+I+FEVGVKD
Sbjct: 61 DVEMENQIVLPEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRDIRFEVGVKDQ 120
Query: 279 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 338
+TYVS QFL+GLMSNP LVRNVALVGHL HGKTVFMDMLVEQTHHMSTF+ K EKH++YT
Sbjct: 121 ATYVSTQFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYT 180
Query: 339 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 398
DTR+DEQER ISIKAVPMSLVLED SKSYLCNIMDTPGH NFSDEMTA+LRLADGAVLI
Sbjct: 181 DTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLI 240
Query: 399 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 458
VDAAEGVMVNTERA+RHAIQ+ LPIVVVINKVD+LITELKLPPRDAYYKLRHT+EVINN+
Sbjct: 241 VDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNH 300
Query: 459 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 518
ISAAS+TAG++ +IDPAAGNVCFAS TAGWSFTLQSFAK+Y KLHG+ D DKFASRLWG
Sbjct: 301 ISAASTTAGDLPLIDPAAGNVCFASGTAGWSFTLQSFAKMYAKLHGVAMDVDKFASRLWG 360
Query: 519 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 578
D Y+HSDTR FK+ PP GGER+FVQF+LEPLYKIYSQVIGEH+KSVETTL+ELGVTLSN
Sbjct: 361 DVYYHSDTRVFKRSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTLSN 420
Query: 579 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 638
+AYKLNVRPLLRLACSSVFG ASGFTDMLV+HIPSPR++++RKVDH YTG KDS IY++M
Sbjct: 421 SAYKLNVRPLLRLACSSVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYESM 480
Query: 639 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 698
ECDPSGPLMVNVTKLYPKSD SVFD FGRVYSG++QTGQ+VRVLGEGYSPEDEEDMT+K
Sbjct: 481 VECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIK 540
Query: 699 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 758
EVTKLW+YQAR RIP++ APPGSWVLIEGVDASIMKTATL N YDEDVYIFR LQFNTL
Sbjct: 541 EVTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALQFNTL 600
Query: 759 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 818
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660
Query: 819 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 878
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPL+RGLAEDIEN VV
Sbjct: 661 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVV 720
Query: 879 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 938
S+DW+RK+LGDFF+TKY+WDLLAARSIWAFGPDKQGPNILLDDTL +EVD+NL+ AVKDS
Sbjct: 721 SIDWNRKQLGDFFRTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDS 780
Query: 939 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 998
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQ+IPTARRVAYS+FLMATP
Sbjct: 781 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMATP 840
Query: 999 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1058
RLMEPVYYVEIQTPIDCV+AIYTVLSRRRGHVT+DV QPGTPAYIVKAFLPVIESFGFET
Sbjct: 841 RLMEPVYYVEIQTPIDCVTAIYTVLSRRRGHVTSDVPQPGTPAYIVKAFLPVIESFGFET 900
Query: 1059 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1118
DLRYHTQGQAFCLSVFDHWAIVPGDPLDK+I LRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGMSE 960
Query: 1119 DVSINKFFDEAMMVELAQQAADLHQQMI 1147
DVS NKFFDEAMMVELAQQ DLH QMI
Sbjct: 961 DVSGNKFFDEAMMVELAQQTGDLHLQMI 987
BLAST of CmoCh05G012720 vs. ExPASy Swiss-Prot
Match:
F4JWP9 (109 kDa U5 small nuclear ribonucleoprotein component GFL OS=Arabidopsis thaliana OX=3702 GN=GFL PE=2 SV=1)
HSP 1 Score: 1665.2 bits (4311), Expect = 0.0e+00
Identity = 830/990 (83.84%), Postives = 901/990 (91.01%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
MD SLY E GNYIGPEI+SD+DSD EDEDL E G SNGWITT N
Sbjct: 1 MDGSLYGECGNYIGPEIESDRDSDDSVEDEDLQEP--------------GGSNGWITTIN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGV-KD 278
+ + IVL EDKKYYP A+EVYG+DVETLVMDEDE LEQPIIKPVR+I+FEVGV KD
Sbjct: 61 E---NQNIVLPEDKKYYPIAKEVYGEDVETLVMDEDEQSLEQPIIKPVRDIRFEVGVIKD 120
Query: 279 -SSTYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLR 338
++TYVS FL+GLMSNP LVRNVALVGHL HGKTVFMDMLVEQTH MSTF+ + +KH+R
Sbjct: 121 QTTTYVSTLFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMR 180
Query: 339 YTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAV 398
YTDTR+DEQER ISIKAVPMSLVLED SKSYLCNIMDTPG+ NFSDEMTA+LRLADGAV
Sbjct: 181 YTDTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAV 240
Query: 399 LIVDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVIN 458
IVDAA+GVMVNTERA+RHAIQ+ LPIVVVINKVD+LITELKLPPRDAYYKLR+T+EVIN
Sbjct: 241 FIVDAAQGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRYTIEVIN 300
Query: 459 NYISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRL 518
N+ISAAS+ A ++ +IDPAAGNVCFAS TAGWSFTLQSFA++Y KLHG+ D DKFASRL
Sbjct: 301 NHISAASTNAADLPLIDPAAGNVCFASGTAGWSFTLQSFARMYAKLHGVAMDVDKFASRL 360
Query: 519 WGDYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTL 578
WGD Y+H DTR F PP GGER+FVQF+LEPLYKIYSQVIGEH+KSVETTL+ELGVTL
Sbjct: 361 WGDVYYHPDTRVFNTSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTL 420
Query: 579 SNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYK 638
SN+AYKLNVRPLLRLACSSVFG ASGFTDMLV+HIPSPR++++RKVDH YTG KDS IY+
Sbjct: 421 SNSAYKLNVRPLLRLACSSVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYE 480
Query: 639 AMKECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMT 698
+M ECDPSGPLMVNVTKLYPKSD SVFD FGRVYSG++QTGQ+VRVLGEGYSPEDEEDMT
Sbjct: 481 SMVECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMT 540
Query: 699 VKEVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFN 758
+KEVTKLW+YQAR RIP++ APPGSWVLIEGVDASIMKTATL N YDEDVYIFR L+FN
Sbjct: 541 IKEVTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALKFN 600
Query: 759 TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKD 818
TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSI+KD
Sbjct: 601 TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIIKD 660
Query: 819 LRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENS 878
LRELYSEV+VKVADPVVSFCETVVESSSMKCFAETPNKKNK+TMIAEPL+RGLAEDIEN
Sbjct: 661 LRELYSEVQVKVADPVVSFCETVVESSSMKCFAETPNKKNKLTMIAEPLDRGLAEDIENG 720
Query: 879 VVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVK 938
VVS+DW+R +LGDFF+TKY+WDLLAARSIWAFGPDKQG NILLDDTL +EVD+NL+ VK
Sbjct: 721 VVSIDWNRVQLGDFFRTKYDWDLLAARSIWAFGPDKQGTNILLDDTLPTEVDRNLMMGVK 780
Query: 939 DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMA 998
DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQ+IPTARRVAYS+FLMA
Sbjct: 781 DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMA 840
Query: 999 TPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGF 1058
TPRLMEPVYYVEIQTPIDCV+AIYTVLSRRRG+VT+DV QPGTPAYIVKAFLPVIESFGF
Sbjct: 841 TPRLMEPVYYVEIQTPIDCVTAIYTVLSRRRGYVTSDVPQPGTPAYIVKAFLPVIESFGF 900
Query: 1059 ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGM 1118
ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDK+I LRPLEPAPIQHLAREFMVKTRRRKGM
Sbjct: 901 ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGM 960
Query: 1119 SEDVSINKFFDEAMMVELAQQAADLHQQMI 1147
SEDVS NKFFDEAMMVELAQQ DLH QMI
Sbjct: 961 SEDVSGNKFFDEAMMVELAQQTGDLHLQMI 973
BLAST of CmoCh05G012720 vs. ExPASy Swiss-Prot
Match:
Q15029 (116 kDa U5 small nuclear ribonucleoprotein component OS=Homo sapiens OX=9606 GN=EFTUD2 PE=1 SV=1)
HSP 1 Score: 1222.2 bits (3161), Expect = 0.0e+00
Identity = 617/991 (62.26%), Postives = 741/991 (74.77%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSD---IEDEDEDLMEKPDDDEGVSDGEDAGGASNGWIT 218
MD LYDEFGNYIGPE+DSD+D D E +D D M+ DDD+ V D +D
Sbjct: 1 MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDDDHPGM----- 60
Query: 219 TSNDVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGV 278
++VL EDKKYYPTAEEVYG +VET+V +ED PL +PIIKPV+ KF +
Sbjct: 61 ---------EVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLME 120
Query: 279 KD-SSTYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKH 338
+ T FL LM N L+RNV L GHLHHGKT F+D L+EQTH + ++
Sbjct: 121 QTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTH--PEIRKRYDQD 180
Query: 339 LRYTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADG 398
L YTD EQERG+ IK+ P+++VL D KSYL NIMDTPGH NFSDE+TA LR++DG
Sbjct: 181 LCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDG 240
Query: 399 AVLIVDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEV 458
VL +DAAEGVM+NTER ++HA+QERL + V INK+D+LI ELKLPP DAYYKLRH ++
Sbjct: 241 VVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDE 300
Query: 459 INNYISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFAS 518
+N IS S+ ++ P GNVCF+S+ FTL SFAK+Y G + +FA
Sbjct: 301 VNGLISMYSTDEN--LILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFG-DINYQEFAK 360
Query: 519 RLWGDYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGV 578
RLWGD YF+ TR F KK P S +RSFV+F+LEPLYKI +QV+G+ S+ TL ELG+
Sbjct: 361 RLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGI 420
Query: 579 TLSNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVI 638
L+ KLN+RPLLRL C FG +GF DM VQHIPSP+ + K++H YTG DS +
Sbjct: 421 HLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDL 480
Query: 639 YKAMKECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEED 698
+AM +CDP GPLM + TK+Y D F AFGRV SG I GQ V+VLGE Y+ EDEED
Sbjct: 481 GEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEED 540
Query: 699 MTVKEVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQ 758
+ V +LW+ AR I + P G+WVLIEGVD I+KTAT++ +E+ IFRPL+
Sbjct: 541 SQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLK 600
Query: 759 FNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIM 818
FNT V+K A EP+NPSELPKM++GLRK++KSYP TKVEESGEH ILGTGELYLD +M
Sbjct: 601 FNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVM 660
Query: 819 KDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIE 878
DLR++YSE+++KVADPVV+FCETVVE+SS+KCFAETPNKKNKITMIAEPLE+GLAEDIE
Sbjct: 661 HDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIE 720
Query: 879 NSVVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNA 938
N VV + W+RKKLG+FFQTKY+WDLLAARSIWAFGPD GPNIL+DDTL SEVDK LL +
Sbjct: 721 NEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGS 780
Query: 939 VKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFL 998
VKDSIVQGFQWG REGPLCDE IRNVKFKI+DA +A EPLHRG GQIIPTARRV YS+FL
Sbjct: 781 VKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFL 840
Query: 999 MATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESF 1058
MATPRLMEP Y+VE+Q P DCVSA+YTVL+RRRGHVT D PG+P Y +KAF+P I+SF
Sbjct: 841 MATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSF 900
Query: 1059 GFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRK 1118
GFETDLR HTQGQAF LSVF HW IVPGDPLDKSIV+RPLEP P HLAREFM+KTRRRK
Sbjct: 901 GFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRK 960
Query: 1119 GMSEDVSINKFFDEAMMVELAQQAADLHQQM 1146
G+SEDVSI+KFFD+ M++ELA+Q L+ M
Sbjct: 961 GLSEDVSISKFFDDPMLLELAKQDVVLNYPM 972
BLAST of CmoCh05G012720 vs. ExPASy Swiss-Prot
Match:
O08810 (116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1)
HSP 1 Score: 1219.9 bits (3155), Expect = 0.0e+00
Identity = 617/989 (62.39%), Postives = 742/989 (75.03%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSD-IEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTS 218
MD LYDEFGNYIGPE+DSD+D D + E +DL E D+DE +D G
Sbjct: 1 MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEDEDEDE-----DDVG--------EH 60
Query: 219 NDVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKD 278
D ++VL EDKKYYPTAEEVYG +VET+V +ED PL +PIIKPV+ KF + +
Sbjct: 61 EDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQT 120
Query: 279 -SSTYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLR 338
T FL LM N L+RNV L GHLHHGKT F+D L+EQTH + ++ L
Sbjct: 121 LPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTH--PEIRKRYDQDLC 180
Query: 339 YTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAV 398
YTD EQERG+ IK+ P+++VL D KSYL NIMDTPGH NFSDE+TA LR++DG V
Sbjct: 181 YTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVV 240
Query: 399 LIVDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVIN 458
L +DAAEGVM+NTER ++HA+QERL + V INK+D+LI ELKLPP DAYYKLRH ++ +N
Sbjct: 241 LFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVN 300
Query: 459 NYISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRL 518
IS S+ ++ P GNVCF+S+ FTL SFAK+Y G + +FA RL
Sbjct: 301 GLISMYSTDEN--LILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFG-DINYQEFAKRL 360
Query: 519 WGDYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTL 578
WGD YF+ TR F KK P+S +RSFV+F+LEPLYKI +QV+G+ S+ TL ELG+ L
Sbjct: 361 WGDIYFNPKTRKFTKKAPSSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHL 420
Query: 579 SNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYK 638
+ KLN+RPLLRL C FG +GF DM VQHIPSP+ + K++H YTG DS + +
Sbjct: 421 TKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGE 480
Query: 639 AMKECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMT 698
AM +CDP GPLM + TK+Y D F AFGRV SG I GQ V+VLGE Y+ EDEED
Sbjct: 481 AMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQ 540
Query: 699 VKEVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFN 758
+ V +LW+ AR I + P G+WVLIEGVD I+KTAT++ +E+ IFRPL+FN
Sbjct: 541 ICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFN 600
Query: 759 TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKD 818
T V+K A EP+NPSELPKM++GLRK++KSYP TKVEESGEH ILGTGELYLD +M D
Sbjct: 601 TTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHD 660
Query: 819 LRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENS 878
LR++YSE+++KVADPVV+FCETVVE+SS+KCFAETPNKKNKITMIAEPLE+GLAEDIEN
Sbjct: 661 LRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENE 720
Query: 879 VVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVK 938
VV + W+RKKLG+FFQTKY+WDLLAARSIWAFGPD GPNIL+DDTL SEVDK LL +VK
Sbjct: 721 VVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVK 780
Query: 939 DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMA 998
DSIVQGFQWG REGPLCDE IRNVKFKI+DA +A EPLHRG GQIIPTARRV YS+FLMA
Sbjct: 781 DSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMA 840
Query: 999 TPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGF 1058
TPRLMEP Y+VE+Q P DCVSA+YTVL+RRRGHVT D PG+P Y +KAF+P I+SFGF
Sbjct: 841 TPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGF 900
Query: 1059 ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGM 1118
ETDLR HTQGQAF LSVF HW IVPGDPLDKSIV+RPLEP P HLAREFM+KTRRRKG+
Sbjct: 901 ETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGL 960
Query: 1119 SEDVSINKFFDEAMMVELAQQAADLHQQM 1146
SEDVSI+KFFD+ M++ELA+Q L+ M
Sbjct: 961 SEDVSISKFFDDPMLLELAKQDVVLNYPM 971
BLAST of CmoCh05G012720 vs. ExPASy Swiss-Prot
Match:
Q5R6E0 (116 kDa U5 small nuclear ribonucleoprotein component OS=Pongo abelii OX=9601 GN=EFTUD2 PE=2 SV=1)
HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 615/991 (62.06%), Postives = 740/991 (74.67%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSD---IEDEDEDLMEKPDDDEGVSDGEDAGGASNGWIT 218
MD LYDEFGNYIGPE+DSD+D D E +D D M+ DDD+ + D +D
Sbjct: 1 MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDIGDHDDDHPGM----- 60
Query: 219 TSNDVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGV 278
++VL EDKKYYPTAEEVYG +VET+V +ED PL +PIIKPV+ KF +
Sbjct: 61 ---------EVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLME 120
Query: 279 KD-SSTYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKH 338
+ T FL LM N L+RNV L GHLHHGKT F+D L+EQTH + ++
Sbjct: 121 QTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTH--PEIRKRYDQD 180
Query: 339 LRYTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADG 398
L YTD EQERG+ IK+ P+++VL D KSYL NIMDTPGH NFSDE+TA LR++DG
Sbjct: 181 LCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDG 240
Query: 399 AVLIVDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEV 458
VL +DAAEGVM+NTER ++HA+QERL + V INK+D+LI ELKLPP DAYYKLRH ++
Sbjct: 241 VVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDE 300
Query: 459 INNYISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFAS 518
+N IS S+ ++ P GNVCF+S+ FTL SFAK+Y G + +FA
Sbjct: 301 VNGLISMYSTDEN--LILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFG-DINYQEFAK 360
Query: 519 RLWGDYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGV 578
RLWGD YF+ TR F KK P S +RSFV+F+LEPLYKI +QV+G+ S+ TL ELG+
Sbjct: 361 RLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGI 420
Query: 579 TLSNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVI 638
L+ KLN+RPLLRL C FG +GF DM VQHIPSP+ + K++H YTG DS +
Sbjct: 421 HLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDL 480
Query: 639 YKAMKECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEED 698
+AM +CDP GPLM + TK+Y D F AFGRV SG I GQ V+VLGE Y+ EDEED
Sbjct: 481 GEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEED 540
Query: 699 MTVKEVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQ 758
+ V +LW+ AR I + P G+WVLIEGVD I+KTAT++ +E+ IFRPL+
Sbjct: 541 SQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLK 600
Query: 759 FNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIM 818
FNT V+K A EP+NPSELPKM++GLRK++KSYP TKVEESGEH ILGTGELYLD +M
Sbjct: 601 FNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVM 660
Query: 819 KDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIE 878
DL ++YSE+++KVADPVV+FCETVVE+SS+KCFAETPNKKNKITMIAEPLE+GLAEDIE
Sbjct: 661 HDLPKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIE 720
Query: 879 NSVVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNA 938
N VV + W+RKKLG+FFQTKY+WDLLAARSIWAFGPD GPNIL+DDTL SEVDK LL +
Sbjct: 721 NEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGS 780
Query: 939 VKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFL 998
VKDSIVQGFQWG REGPLCDE IRNVKFKI+DA +A EPLHRG GQIIPTARRV YS+FL
Sbjct: 781 VKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFL 840
Query: 999 MATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESF 1058
MATPRLMEP Y+VE+Q P DCVSA+YTVL+RRRGHVT D PG+P Y +KAF+P I+SF
Sbjct: 841 MATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSF 900
Query: 1059 GFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRK 1118
GFETDLR HTQGQAF LSVF HW IVPGDPLDKSIV+RPLEP P HLAREFM+KTRRRK
Sbjct: 901 GFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRK 960
Query: 1119 GMSEDVSINKFFDEAMMVELAQQAADLHQQM 1146
G+SEDVSI+KFFD+ M++ELA+Q L+ M
Sbjct: 961 GLSEDVSISKFFDDPMLLELAKQDVVLNYPM 972
BLAST of CmoCh05G012720 vs. ExPASy TrEMBL
Match:
A0A6J1G489 (110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Cucurbita moschata OX=3662 GN=LOC111450655 PE=3 SV=1)
HSP 1 Score: 1968.7 bits (5099), Expect = 0.0e+00
Identity = 988/988 (100.00%), Postives = 988/988 (100.00%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN
Sbjct: 1 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 278
DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS
Sbjct: 61 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120
Query: 279 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 338
STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT
Sbjct: 121 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 180
Query: 339 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 398
DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240
Query: 399 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 458
VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY
Sbjct: 241 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 300
Query: 459 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 518
ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG
Sbjct: 301 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 360
Query: 519 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 578
DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN
Sbjct: 361 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 420
Query: 579 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 638
AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM
Sbjct: 421 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 480
Query: 639 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 698
KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK
Sbjct: 481 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540
Query: 699 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 758
EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600
Query: 759 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 818
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660
Query: 819 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 878
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV
Sbjct: 661 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 720
Query: 879 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 938
SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780
Query: 939 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 998
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840
Query: 999 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1058
RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900
Query: 1059 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1118
DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960
Query: 1119 DVSINKFFDEAMMVELAQQAADLHQQMI 1147
DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961 DVSINKFFDEAMMVELAQQAADLHQQMI 988
BLAST of CmoCh05G012720 vs. ExPASy TrEMBL
Match:
A0A6J1KJ78 (110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Cucurbita maxima OX=3661 GN=LOC111493710 PE=3 SV=1)
HSP 1 Score: 1964.5 bits (5088), Expect = 0.0e+00
Identity = 986/988 (99.80%), Postives = 986/988 (99.80%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEG SD EDAGGASNGWITTSN
Sbjct: 1 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGASDDEDAGGASNGWITTSN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 278
DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS
Sbjct: 61 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120
Query: 279 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 338
STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT
Sbjct: 121 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 180
Query: 339 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 398
DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240
Query: 399 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 458
VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY
Sbjct: 241 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 300
Query: 459 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 518
ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG
Sbjct: 301 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 360
Query: 519 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 578
DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN
Sbjct: 361 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 420
Query: 579 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 638
AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM
Sbjct: 421 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 480
Query: 639 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 698
KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK
Sbjct: 481 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540
Query: 699 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 758
EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600
Query: 759 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 818
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660
Query: 819 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 878
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV
Sbjct: 661 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 720
Query: 879 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 938
SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780
Query: 939 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 998
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840
Query: 999 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1058
RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900
Query: 1059 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1118
DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960
Query: 1119 DVSINKFFDEAMMVELAQQAADLHQQMI 1147
DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961 DVSINKFFDEAMMVELAQQAADLHQQMI 988
BLAST of CmoCh05G012720 vs. ExPASy TrEMBL
Match:
A0A0A0LI82 (Tr-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009370 PE=3 SV=1)
HSP 1 Score: 1947.9 bits (5045), Expect = 0.0e+00
Identity = 970/995 (97.49%), Postives = 990/995 (99.50%), Query Frame = 0
Query: 152 AALRILSMDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASN 211
A+LRILSMDDSLYDEFGNYIGPEIDSDKDSDIEDEDE+LMEKP++DEGVSDGEDAGGASN
Sbjct: 96 ASLRILSMDDSLYDEFGNYIGPEIDSDKDSDIEDEDENLMEKPEEDEGVSDGEDAGGASN 155
Query: 212 GWITTSNDVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKF 271
GWITTSNDVDMDNQIVLAEDKKYYPTAEEVYG+DVETLVMDEDELPLEQPIIKPVRN+KF
Sbjct: 156 GWITTSNDVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKF 215
Query: 272 EVGVKDSSTYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKG 331
EVGVKDS TYVSNQFLVGLMSNPTLVRNVALVGH+HHGKTVFMDML+EQTHHMSTFDIKG
Sbjct: 216 EVGVKDSRTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKG 275
Query: 332 EKHLRYTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRL 391
EKHLRYTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRL
Sbjct: 276 EKHLRYTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRL 335
Query: 392 ADGAVLIVDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHT 451
ADGAVLIVDAAEGVMVNTERA+RHAIQERLPIVVVINKVD+LITELKLPPRDAYYKLRHT
Sbjct: 336 ADGAVLIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHT 395
Query: 452 LEVINNYISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADK 511
LE+INN+ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADK
Sbjct: 396 LEIINNHISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADK 455
Query: 512 FASRLWGDYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSE 571
FA+RLWGDYY+H DTRGFKKK PASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL+E
Sbjct: 456 FATRLWGDYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAE 515
Query: 572 LGVTLSNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKD 631
LGVTLSNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRD+SSRKVDHIYTGPKD
Sbjct: 516 LGVTLSNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKD 575
Query: 632 SVIYKAMKECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPED 691
S+IYKAMKECDPSGPLMVN+TKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSP+D
Sbjct: 576 SMIYKAMKECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDD 635
Query: 692 EEDMTVKEVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFR 751
EEDM VKEVTKLWLYQARDR+PIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFR
Sbjct: 636 EEDMVVKEVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFR 695
Query: 752 PLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLD 811
PLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLD
Sbjct: 696 PLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLD 755
Query: 812 SIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAE 871
SIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAE
Sbjct: 756 SIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAE 815
Query: 872 DIENSVVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNL 931
DIEN VVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNL
Sbjct: 816 DIENGVVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNL 875
Query: 932 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYS 991
LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYS
Sbjct: 876 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYS 935
Query: 992 SFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVI 1051
SFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVI
Sbjct: 936 SFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVI 995
Query: 1052 ESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTR 1111
ESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTR
Sbjct: 996 ESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTR 1055
Query: 1112 RRKGMSEDVSINKFFDEAMMVELAQQAADLHQQMI 1147
RRKGMSEDVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 1056 RRKGMSEDVSINKFFDEAMMVELAQQAADLHQQMI 1090
BLAST of CmoCh05G012720 vs. ExPASy TrEMBL
Match:
A0A5D3BGV4 (116 kDa U5 small nuclear ribonucleoprotein component-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00950 PE=3 SV=1)
HSP 1 Score: 1942.9 bits (5032), Expect = 0.0e+00
Identity = 969/988 (98.08%), Postives = 984/988 (99.60%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPD+DEGVSDGEDAGGASNGWITTSN
Sbjct: 1 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 278
DVDMDNQIVLAEDKKYYPTAEEVYG+DVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS
Sbjct: 61 DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120
Query: 279 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 338
TYVSNQFLVGLMSNPTLVRNVALVGH+HHGKTVFMDML+EQTHHMSTFDIKGEKHLRYT
Sbjct: 121 RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 180
Query: 339 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 398
DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240
Query: 399 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 458
VDAAEGVMVNTERA+RHAIQERLPIVVVINKVD+LITELKLPPRDAYYKLRHTLE+INN+
Sbjct: 241 VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 300
Query: 459 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 518
ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFA+RLWG
Sbjct: 301 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 360
Query: 519 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 578
DYY+H DTRGFKKK PASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL+ELGVTLSN
Sbjct: 361 DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSN 420
Query: 579 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 638
AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRD+SSRKVDHIYTGPKDS+IYKAM
Sbjct: 421 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 480
Query: 639 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 698
+ECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK
Sbjct: 481 EECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540
Query: 699 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 758
EVTKLWLYQARDR+PIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541 EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600
Query: 759 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 818
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660
Query: 819 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 878
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN VV
Sbjct: 661 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 720
Query: 879 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 938
SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780
Query: 939 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 998
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840
Query: 999 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1058
RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900
Query: 1059 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1118
DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960
Query: 1119 DVSINKFFDEAMMVELAQQAADLHQQMI 1147
DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961 DVSINKFFDEAMMVELAQQAADLHQQMI 988
BLAST of CmoCh05G012720 vs. ExPASy TrEMBL
Match:
A0A1S3C4I3 (116 kDa U5 small nuclear ribonucleoprotein component-like OS=Cucumis melo OX=3656 GN=LOC103496558 PE=3 SV=1)
HSP 1 Score: 1938.3 bits (5020), Expect = 0.0e+00
Identity = 968/988 (97.98%), Postives = 982/988 (99.39%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPD+DEGVSDGEDAGGASNGWITTSN
Sbjct: 1 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 278
DVDMDNQIVLAEDKKYYPTAEEVYG+DVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS
Sbjct: 61 DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120
Query: 279 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 338
TYVSNQFLVGLMSNPTLVRNVALVGH+HHGKTVFMDML+EQTHHMSTFDIKGEKHLRYT
Sbjct: 121 RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 180
Query: 339 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 398
DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240
Query: 399 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 458
VDAAEGVMVNTERA+RHAIQERLPIVVVINKVD+LITELKLPPRDAYYKLRHTLE+INN+
Sbjct: 241 VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 300
Query: 459 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 518
ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGI FDADKFA+RLWG
Sbjct: 301 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGISFDADKFATRLWG 360
Query: 519 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 578
DYY+H DTRGFKKK PASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL+ELGVTLSN
Sbjct: 361 DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSN 420
Query: 579 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 638
AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRD+SSRKVDHIYTGPKDS+IY AM
Sbjct: 421 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYIAM 480
Query: 639 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 698
KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK
Sbjct: 481 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540
Query: 699 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 758
EVTKLWLYQARDR+PIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541 EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600
Query: 759 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 818
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660
Query: 819 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 878
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN VV
Sbjct: 661 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 720
Query: 879 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 938
SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780
Query: 939 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 998
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840
Query: 999 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1058
RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900
Query: 1059 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1118
DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960
Query: 1119 DVSINKFFDEAMMVELAQQAADLHQQMI 1147
DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961 DVSINKFFDEAMMVELAQQAADLHQQMI 988
BLAST of CmoCh05G012720 vs. NCBI nr
Match:
XP_022946650.1 (110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucurbita moschata] >XP_022946651.1 110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucurbita moschata])
HSP 1 Score: 1968.7 bits (5099), Expect = 0.0e+00
Identity = 988/988 (100.00%), Postives = 988/988 (100.00%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN
Sbjct: 1 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 278
DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS
Sbjct: 61 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120
Query: 279 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 338
STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT
Sbjct: 121 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 180
Query: 339 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 398
DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240
Query: 399 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 458
VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY
Sbjct: 241 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 300
Query: 459 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 518
ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG
Sbjct: 301 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 360
Query: 519 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 578
DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN
Sbjct: 361 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 420
Query: 579 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 638
AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM
Sbjct: 421 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 480
Query: 639 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 698
KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK
Sbjct: 481 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540
Query: 699 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 758
EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600
Query: 759 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 818
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660
Query: 819 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 878
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV
Sbjct: 661 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 720
Query: 879 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 938
SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780
Query: 939 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 998
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840
Query: 999 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1058
RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900
Query: 1059 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1118
DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960
Query: 1119 DVSINKFFDEAMMVELAQQAADLHQQMI 1147
DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961 DVSINKFFDEAMMVELAQQAADLHQQMI 988
BLAST of CmoCh05G012720 vs. NCBI nr
Match:
XP_023546089.1 (110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucurbita pepo subsp. pepo] >KAG7030342.1 U5 small nuclear ribonucleoprotein component CLO [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1966.0 bits (5092), Expect = 0.0e+00
Identity = 986/988 (99.80%), Postives = 987/988 (99.90%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEG SDGEDAGGA+NGWITTSN
Sbjct: 1 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGASDGEDAGGATNGWITTSN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 278
DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS
Sbjct: 61 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120
Query: 279 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 338
STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT
Sbjct: 121 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 180
Query: 339 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 398
DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240
Query: 399 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 458
VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY
Sbjct: 241 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 300
Query: 459 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 518
ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG
Sbjct: 301 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 360
Query: 519 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 578
DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN
Sbjct: 361 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 420
Query: 579 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 638
AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM
Sbjct: 421 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 480
Query: 639 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 698
KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK
Sbjct: 481 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540
Query: 699 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 758
EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600
Query: 759 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 818
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660
Query: 819 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 878
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV
Sbjct: 661 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 720
Query: 879 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 938
SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780
Query: 939 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 998
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840
Query: 999 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1058
RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900
Query: 1059 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1118
DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960
Query: 1119 DVSINKFFDEAMMVELAQQAADLHQQMI 1147
DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961 DVSINKFFDEAMMVELAQQAADLHQQMI 988
BLAST of CmoCh05G012720 vs. NCBI nr
Match:
XP_022999292.1 (110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucurbita maxima] >XP_022999293.1 110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucurbita maxima])
HSP 1 Score: 1964.5 bits (5088), Expect = 0.0e+00
Identity = 986/988 (99.80%), Postives = 986/988 (99.80%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEG SD EDAGGASNGWITTSN
Sbjct: 1 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGASDDEDAGGASNGWITTSN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 278
DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS
Sbjct: 61 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120
Query: 279 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 338
STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT
Sbjct: 121 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 180
Query: 339 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 398
DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240
Query: 399 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 458
VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY
Sbjct: 241 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 300
Query: 459 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 518
ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG
Sbjct: 301 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 360
Query: 519 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 578
DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN
Sbjct: 361 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 420
Query: 579 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 638
AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM
Sbjct: 421 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 480
Query: 639 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 698
KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK
Sbjct: 481 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540
Query: 699 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 758
EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600
Query: 759 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 818
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660
Query: 819 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 878
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV
Sbjct: 661 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 720
Query: 879 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 938
SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780
Query: 939 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 998
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840
Query: 999 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1058
RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900
Query: 1059 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1118
DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960
Query: 1119 DVSINKFFDEAMMVELAQQAADLHQQMI 1147
DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961 DVSINKFFDEAMMVELAQQAADLHQQMI 988
BLAST of CmoCh05G012720 vs. NCBI nr
Match:
KAA0063554.1 (116 kDa U5 small nuclear ribonucleoprotein component-like protein [Cucumis melo var. makuwa] >TYJ97881.1 116 kDa U5 small nuclear ribonucleoprotein component-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 1942.9 bits (5032), Expect = 0.0e+00
Identity = 969/988 (98.08%), Postives = 984/988 (99.60%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPD+DEGVSDGEDAGGASNGWITTSN
Sbjct: 1 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 278
DVDMDNQIVLAEDKKYYPTAEEVYG+DVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS
Sbjct: 61 DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120
Query: 279 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 338
TYVSNQFLVGLMSNPTLVRNVALVGH+HHGKTVFMDML+EQTHHMSTFDIKGEKHLRYT
Sbjct: 121 RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 180
Query: 339 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 398
DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240
Query: 399 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 458
VDAAEGVMVNTERA+RHAIQERLPIVVVINKVD+LITELKLPPRDAYYKLRHTLE+INN+
Sbjct: 241 VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 300
Query: 459 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 518
ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFA+RLWG
Sbjct: 301 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATRLWG 360
Query: 519 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 578
DYY+H DTRGFKKK PASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL+ELGVTLSN
Sbjct: 361 DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSN 420
Query: 579 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 638
AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRD+SSRKVDHIYTGPKDS+IYKAM
Sbjct: 421 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYKAM 480
Query: 639 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 698
+ECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK
Sbjct: 481 EECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540
Query: 699 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 758
EVTKLWLYQARDR+PIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541 EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600
Query: 759 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 818
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660
Query: 819 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 878
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN VV
Sbjct: 661 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 720
Query: 879 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 938
SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780
Query: 939 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 998
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840
Query: 999 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1058
RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900
Query: 1059 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1118
DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960
Query: 1119 DVSINKFFDEAMMVELAQQAADLHQQMI 1147
DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961 DVSINKFFDEAMMVELAQQAADLHQQMI 988
BLAST of CmoCh05G012720 vs. NCBI nr
Match:
XP_008456689.1 (PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component-like [Cucumis melo])
HSP 1 Score: 1938.3 bits (5020), Expect = 0.0e+00
Identity = 968/988 (97.98%), Postives = 982/988 (99.39%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPD+DEGVSDGEDAGGASNGWITTSN
Sbjct: 1 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDEDEGVSDGEDAGGASNGWITTSN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 278
DVDMDNQIVLAEDKKYYPTAEEVYG+DVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS
Sbjct: 61 DVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 120
Query: 279 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 338
TYVSNQFLVGLMSNPTLVRNVALVGH+HHGKTVFMDML+EQTHHMSTFDIKGEKHLRYT
Sbjct: 121 RTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHLRYT 180
Query: 339 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 398
DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI
Sbjct: 181 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 240
Query: 399 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 458
VDAAEGVMVNTERA+RHAIQERLPIVVVINKVD+LITELKLPPRDAYYKLRHTLE+INN+
Sbjct: 241 VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEIINNH 300
Query: 459 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 518
ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGI FDADKFA+RLWG
Sbjct: 301 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGISFDADKFATRLWG 360
Query: 519 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 578
DYY+H DTRGFKKK PASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTL+ELGVTLSN
Sbjct: 361 DYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVTLSN 420
Query: 579 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 638
AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRD+SSRKVDHIYTGPKDS+IY AM
Sbjct: 421 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIYIAM 480
Query: 639 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 698
KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK
Sbjct: 481 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 540
Query: 699 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 758
EVTKLWLYQARDR+PIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL
Sbjct: 541 EVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 600
Query: 759 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 818
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660
Query: 819 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 878
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN VV
Sbjct: 661 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV 720
Query: 879 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 938
SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS
Sbjct: 721 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 780
Query: 939 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 998
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
Sbjct: 781 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 840
Query: 999 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1058
RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET
Sbjct: 841 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 900
Query: 1059 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1118
DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 960
Query: 1119 DVSINKFFDEAMMVELAQQAADLHQQMI 1147
DVSINKFFDEAMMVELAQQAADLHQQMI
Sbjct: 961 DVSINKFFDEAMMVELAQQAADLHQQMI 988
BLAST of CmoCh05G012720 vs. TAIR 10
Match:
AT1G06220.2 (Ribosomal protein S5/Elongation factor G/III/V family protein )
HSP 1 Score: 1752.3 bits (4537), Expect = 0.0e+00
Identity = 864/988 (87.45%), Postives = 929/988 (94.03%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
M+ SLYDEFGNY+GPEI+SD+DSD E EDEDL +K ++ G SDGE G SNGWITT N
Sbjct: 1 MESSLYDEFGNYVGPEIESDRDSDDEVEDEDLQDKHLEENG-SDGEQGPGGSNGWITTIN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 278
DV+M+NQIVL EDKKYYPTAEEVYG+DVETLVMDEDE PLEQPIIKPVR+I+FEVGVKD
Sbjct: 61 DVEMENQIVLPEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRDIRFEVGVKDQ 120
Query: 279 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 338
+TYVS QFL+GLMSNP LVRNVALVGHL HGKTVFMDMLVEQTHHMSTF+ K EKH++YT
Sbjct: 121 ATYVSTQFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYT 180
Query: 339 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 398
DTR+DEQER ISIKAVPMSLVLED SKSYLCNIMDTPGH NFSDEMTA+LRLADGAVLI
Sbjct: 181 DTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLI 240
Query: 399 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 458
VDAAEGVMVNTERA+RHAIQ+ LPIVVVINKVD+LITELKLPPRDAYYKLRHT+EVINN+
Sbjct: 241 VDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNH 300
Query: 459 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 518
ISAAS+TAG++ +IDPAAGNVCFAS TAGWSFTLQSFAK+Y KLHG+ D DKFASRLWG
Sbjct: 301 ISAASTTAGDLPLIDPAAGNVCFASGTAGWSFTLQSFAKMYAKLHGVAMDVDKFASRLWG 360
Query: 519 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 578
D Y+HSDTR FK+ PP GGER+FVQF+LEPLYKIYSQVIGEH+KSVETTL+ELGVTLSN
Sbjct: 361 DVYYHSDTRVFKRSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTLSN 420
Query: 579 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 638
+AYKLNVRPLLRLACSSVFG ASGFTDMLV+HIPSPR++++RKVDH YTG KDS IY++M
Sbjct: 421 SAYKLNVRPLLRLACSSVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYESM 480
Query: 639 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 698
ECDPSGPLMVNVTKLYPKSD SVFD FGRVYSG++QTGQ+VRVLGEGYSPEDEEDMT+K
Sbjct: 481 VECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIK 540
Query: 699 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 758
EVTKLW+YQAR RIP++ APPGSWVLIEGVDASIMKTATL N YDEDVYIFR LQFNTL
Sbjct: 541 EVTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALQFNTL 600
Query: 759 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 818
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660
Query: 819 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 878
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPL+RGLAEDIEN VV
Sbjct: 661 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVV 720
Query: 879 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 938
S+DW+RK+LGDFF+TKY+WDLLAARSIWAFGPDKQGPNILLDDTL +EVD+NL+ AVKDS
Sbjct: 721 SIDWNRKQLGDFFRTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDS 780
Query: 939 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 998
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQ+IPTARRVAYS+FLMATP
Sbjct: 781 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMATP 840
Query: 999 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1058
RLMEPVYYVEIQTPIDCV+AIYTVLSRRRGHVT+DV QPGTPAYIVKAFLPVIESFGFET
Sbjct: 841 RLMEPVYYVEIQTPIDCVTAIYTVLSRRRGHVTSDVPQPGTPAYIVKAFLPVIESFGFET 900
Query: 1059 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1118
DLRYHTQGQAFCLSVFDHWAIVPGDPLDK+I LRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGMSE 960
Query: 1119 DVSINKFFDEAMMVELAQQAADLHQQMI 1147
DVS NKFFDEAMMVELAQQ DLH QMI
Sbjct: 961 DVSGNKFFDEAMMVELAQQTGDLHLQMI 987
BLAST of CmoCh05G012720 vs. TAIR 10
Match:
AT1G06220.1 (Ribosomal protein S5/Elongation factor G/III/V family protein )
HSP 1 Score: 1752.3 bits (4537), Expect = 0.0e+00
Identity = 864/988 (87.45%), Postives = 929/988 (94.03%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
M+ SLYDEFGNY+GPEI+SD+DSD E EDEDL +K ++ G SDGE G SNGWITT N
Sbjct: 1 MESSLYDEFGNYVGPEIESDRDSDDEVEDEDLQDKHLEENG-SDGEQGPGGSNGWITTIN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGVKDS 278
DV+M+NQIVL EDKKYYPTAEEVYG+DVETLVMDEDE PLEQPIIKPVR+I+FEVGVKD
Sbjct: 61 DVEMENQIVLPEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRDIRFEVGVKDQ 120
Query: 279 STYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYT 338
+TYVS QFL+GLMSNP LVRNVALVGHL HGKTVFMDMLVEQTHHMSTF+ K EKH++YT
Sbjct: 121 ATYVSTQFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYT 180
Query: 339 DTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLI 398
DTR+DEQER ISIKAVPMSLVLED SKSYLCNIMDTPGH NFSDEMTA+LRLADGAVLI
Sbjct: 181 DTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLI 240
Query: 399 VDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNY 458
VDAAEGVMVNTERA+RHAIQ+ LPIVVVINKVD+LITELKLPPRDAYYKLRHT+EVINN+
Sbjct: 241 VDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNH 300
Query: 459 ISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWG 518
ISAAS+TAG++ +IDPAAGNVCFAS TAGWSFTLQSFAK+Y KLHG+ D DKFASRLWG
Sbjct: 301 ISAASTTAGDLPLIDPAAGNVCFASGTAGWSFTLQSFAKMYAKLHGVAMDVDKFASRLWG 360
Query: 519 DYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSN 578
D Y+HSDTR FK+ PP GGER+FVQF+LEPLYKIYSQVIGEH+KSVETTL+ELGVTLSN
Sbjct: 361 DVYYHSDTRVFKRSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTLSN 420
Query: 579 AAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAM 638
+AYKLNVRPLLRLACSSVFG ASGFTDMLV+HIPSPR++++RKVDH YTG KDS IY++M
Sbjct: 421 SAYKLNVRPLLRLACSSVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYESM 480
Query: 639 KECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVK 698
ECDPSGPLMVNVTKLYPKSD SVFD FGRVYSG++QTGQ+VRVLGEGYSPEDEEDMT+K
Sbjct: 481 VECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIK 540
Query: 699 EVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTL 758
EVTKLW+YQAR RIP++ APPGSWVLIEGVDASIMKTATL N YDEDVYIFR LQFNTL
Sbjct: 541 EVTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALQFNTL 600
Query: 759 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 818
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
Sbjct: 601 PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR 660
Query: 819 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVV 878
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPL+RGLAEDIEN VV
Sbjct: 661 ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVV 720
Query: 879 SLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDS 938
S+DW+RK+LGDFF+TKY+WDLLAARSIWAFGPDKQGPNILLDDTL +EVD+NL+ AVKDS
Sbjct: 721 SIDWNRKQLGDFFRTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDS 780
Query: 939 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP 998
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQ+IPTARRVAYS+FLMATP
Sbjct: 781 IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMATP 840
Query: 999 RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFET 1058
RLMEPVYYVEIQTPIDCV+AIYTVLSRRRGHVT+DV QPGTPAYIVKAFLPVIESFGFET
Sbjct: 841 RLMEPVYYVEIQTPIDCVTAIYTVLSRRRGHVTSDVPQPGTPAYIVKAFLPVIESFGFET 900
Query: 1059 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 1118
DLRYHTQGQAFCLSVFDHWAIVPGDPLDK+I LRPLEPAPIQHLAREFMVKTRRRKGMSE
Sbjct: 901 DLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGMSE 960
Query: 1119 DVSINKFFDEAMMVELAQQAADLHQQMI 1147
DVS NKFFDEAMMVELAQQ DLH QMI
Sbjct: 961 DVSGNKFFDEAMMVELAQQTGDLHLQMI 987
BLAST of CmoCh05G012720 vs. TAIR 10
Match:
AT5G25230.1 (Ribosomal protein S5/Elongation factor G/III/V family protein )
HSP 1 Score: 1665.2 bits (4311), Expect = 0.0e+00
Identity = 830/990 (83.84%), Postives = 901/990 (91.01%), Query Frame = 0
Query: 159 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDEDLMEKPDDDEGVSDGEDAGGASNGWITTSN 218
MD SLY E GNYIGPEI+SD+DSD EDEDL E G SNGWITT N
Sbjct: 1 MDGSLYGECGNYIGPEIESDRDSDDSVEDEDLQEP--------------GGSNGWITTIN 60
Query: 219 DVDMDNQIVLAEDKKYYPTAEEVYGDDVETLVMDEDELPLEQPIIKPVRNIKFEVGV-KD 278
+ + IVL EDKKYYP A+EVYG+DVETLVMDEDE LEQPIIKPVR+I+FEVGV KD
Sbjct: 61 E---NQNIVLPEDKKYYPIAKEVYGEDVETLVMDEDEQSLEQPIIKPVRDIRFEVGVIKD 120
Query: 279 -SSTYVSNQFLVGLMSNPTLVRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLR 338
++TYVS FL+GLMSNP LVRNVALVGHL HGKTVFMDMLVEQTH MSTF+ + +KH+R
Sbjct: 121 QTTTYVSTLFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMR 180
Query: 339 YTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAV 398
YTDTR+DEQER ISIKAVPMSLVLED SKSYLCNIMDTPG+ NFSDEMTA+LRLADGAV
Sbjct: 181 YTDTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAV 240
Query: 399 LIVDAAEGVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVIN 458
IVDAA+GVMVNTERA+RHAIQ+ LPIVVVINKVD+LITELKLPPRDAYYKLR+T+EVIN
Sbjct: 241 FIVDAAQGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRYTIEVIN 300
Query: 459 NYISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRL 518
N+ISAAS+ A ++ +IDPAAGNVCFAS TAGWSFTLQSFA++Y KLHG+ D DKFASRL
Sbjct: 301 NHISAASTNAADLPLIDPAAGNVCFASGTAGWSFTLQSFARMYAKLHGVAMDVDKFASRL 360
Query: 519 WGDYYFHSDTRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTL 578
WGD Y+H DTR F PP GGER+FVQF+LEPLYKIYSQVIGEH+KSVETTL+ELGVTL
Sbjct: 361 WGDVYYHPDTRVFNTSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTL 420
Query: 579 SNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYK 638
SN+AYKLNVRPLLRLACSSVFG ASGFTDMLV+HIPSPR++++RKVDH YTG KDS IY+
Sbjct: 421 SNSAYKLNVRPLLRLACSSVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYE 480
Query: 639 AMKECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMT 698
+M ECDPSGPLMVNVTKLYPKSD SVFD FGRVYSG++QTGQ+VRVLGEGYSPEDEEDMT
Sbjct: 481 SMVECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMT 540
Query: 699 VKEVTKLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFN 758
+KEVTKLW+YQAR RIP++ APPGSWVLIEGVDASIMKTATL N YDEDVYIFR L+FN
Sbjct: 541 IKEVTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALKFN 600
Query: 759 TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKD 818
TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSI+KD
Sbjct: 601 TLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIIKD 660
Query: 819 LRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENS 878
LRELYSEV+VKVADPVVSFCETVVESSSMKCFAETPNKKNK+TMIAEPL+RGLAEDIEN
Sbjct: 661 LRELYSEVQVKVADPVVSFCETVVESSSMKCFAETPNKKNKLTMIAEPLDRGLAEDIENG 720
Query: 879 VVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVK 938
VVS+DW+R +LGDFF+TKY+WDLLAARSIWAFGPDKQG NILLDDTL +EVD+NL+ VK
Sbjct: 721 VVSIDWNRVQLGDFFRTKYDWDLLAARSIWAFGPDKQGTNILLDDTLPTEVDRNLMMGVK 780
Query: 939 DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMA 998
DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQ+IPTARRVAYS+FLMA
Sbjct: 781 DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMA 840
Query: 999 TPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGF 1058
TPRLMEPVYYVEIQTPIDCV+AIYTVLSRRRG+VT+DV QPGTPAYIVKAFLPVIESFGF
Sbjct: 841 TPRLMEPVYYVEIQTPIDCVTAIYTVLSRRRGYVTSDVPQPGTPAYIVKAFLPVIESFGF 900
Query: 1059 ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGM 1118
ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDK+I LRPLEPAPIQHLAREFMVKTRRRKGM
Sbjct: 901 ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGM 960
Query: 1119 SEDVSINKFFDEAMMVELAQQAADLHQQMI 1147
SEDVS NKFFDEAMMVELAQQ DLH QMI
Sbjct: 961 SEDVSGNKFFDEAMMVELAQQTGDLHLQMI 973
BLAST of CmoCh05G012720 vs. TAIR 10
Match:
AT1G56070.1 (Ribosomal protein S5/Elongation factor G/III/V family protein )
HSP 1 Score: 610.9 bits (1574), Expect = 2.1e-174
Identity = 328/849 (38.63%), Postives = 513/849 (60.42%), Query Frame = 0
Query: 297 VRNVALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYTDTRIDEQERGISIKAVPM 356
+RN++++ H+ HGK+ D LV ++ ++ G+ +R TDTR DE ERGI+IK+ +
Sbjct: 19 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQ-EVAGD--VRMTDTRADEAERGITIKSTGI 78
Query: 357 SLVLE-------------DGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLIVDAAE 416
SL E DGN YL N++D+PGH +FS E+TAALR+ DGA+++VD E
Sbjct: 79 SLYYEMTDESLKSFTGARDGN--EYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIE 138
Query: 417 GVMVNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNYISA-A 476
GV V TE +R A+ ER+ V+ +NK+D+ EL++ +AY +E N ++
Sbjct: 139 GVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYE 198
Query: 477 SSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWGDYYF 536
G+VQV P G V F++ GW+FTL +FAK+Y G+ K RLWG+ +F
Sbjct: 199 DPLLGDVQVY-PEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVV--ESKMMERLWGENFF 258
Query: 537 HSDTRGFKKKPPASGG-ERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSNAAY 596
TR + K S +R FVQF EP+ +I + + + + + L++LGV++ N
Sbjct: 259 DPATRKWSGKNTGSPTCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLAKLGVSMKNDEK 318
Query: 597 KLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAMKEC 656
+L +PL++ + ++ +M++ H+PSP + +V+++Y GP D A++ C
Sbjct: 319 ELMGKPLMKRVMQTWLPASTALLEMMIFHLPSPHTAQRYRVENLYEGPLDDQYANAIRNC 378
Query: 657 DPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVKEVT 716
DP+GPLM+ V+K+ P SD F AFGRV++GK+ TG VR++G Y P +++D+ K V
Sbjct: 379 DPNGPLMLYVSKMIPASDKGRFFAFGRVFAGKVSTGMKVRIMGPNYIPGEKKDLYTKSVQ 438
Query: 717 KLWLYQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTLPVV 776
+ ++ + + + + P G+ V + G+D I K ATL+N + + D + R ++F+ PVV
Sbjct: 439 RTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTN-EKEVDAHPIRAMKFSVSPVV 498
Query: 777 KTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR-EL 836
+ A + S+LPK+VEGL++++KS P+ + +EESGEH + G GEL+L+ +KDL+ +
Sbjct: 499 RVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQDDF 558
Query: 837 YSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVVSL 896
E+ +DPVVSF ETV + S+ +++PNK N++ M A P+E GLAE I++ +
Sbjct: 559 MGGAEIIKSDPVVSFRETVCDRSTRTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGRIGP 618
Query: 897 DWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIV 956
K ++ WD A+ IWAFGP+ GPN+++D + LN +KDS+V
Sbjct: 619 RDDPKIRSKILAEEFGWDKDLAKKIWAFGPETTGPNMVVDMCKGVQ----YLNEIKDSVV 678
Query: 957 QGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATPRL 1016
GFQW ++EGPL +E +R + F++ D + + +HRG GQ+IPTARRV Y+S + A PRL
Sbjct: 679 AGFQWASKEGPLAEENMRGICFEVCDVVLHSDAIHRGGGQVIPTARRVIYASQITAKPRL 738
Query: 1017 MEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFETDL 1076
+EPVY VEIQ P + IY+VL+++RGHV ++ +PGTP Y +KA+LPV+ESFGF + L
Sbjct: 739 LEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSQL 798
Query: 1077 RYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSEDV 1129
R T GQAF VFDHW ++ D PLEP A + R+RKG+ E +
Sbjct: 799 RAATSGQAFPQCVFDHWEMMSSD---------PLEPGT---QASVLVADIRKRKGLKEAM 842
BLAST of CmoCh05G012720 vs. TAIR 10
Match:
AT3G12915.1 (Ribosomal protein S5/Elongation factor G/III/V family protein )
HSP 1 Score: 595.5 bits (1534), Expect = 9.0e-170
Identity = 312/801 (38.95%), Postives = 482/801 (60.17%), Query Frame = 0
Query: 300 VALVGHLHHGKTVFMDMLVEQTHHMSTFDIKGEKHLRYTDTRIDEQERGISIKAVPMSLV 359
++++ H+ HGK+ D LV ++ + G+ +R TDTR DE ERGI+IK+ +SL
Sbjct: 1 MSVIAHVDHGKSTLTDSLVAAAGIIAQ-ETAGD--VRMTDTRADEAERGITIKSTGISLY 60
Query: 360 LE-------------DGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGAVLIVDAAEGVM 419
E DGN YL N++D+PGH +FS E+TAALR+ DGA+++VD EGV
Sbjct: 61 YEMTDASLKSFTGARDGN--EYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVC 120
Query: 420 VNTERAMRHAIQERLPIVVVINKVDKLITELKLPPRDAYYKLRHTLEVINNYISA-ASST 479
V TE +R ++ ER+ V+ +NK+D+ ELK+ +AY + +E N ++
Sbjct: 121 VQTETVLRQSLGERIRPVLTVNKMDRCFLELKVDGEEAYQNFQRVIENANVIMATHEDPL 180
Query: 480 AGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASRLWGDYYFHSD 539
G+VQV P G V F++ GW+FTL +FAK+Y G+ K RLWG+ +F S
Sbjct: 181 LGDVQVY-PEKGTVAFSAGLHGWAFTLTNFAKMYASKFGV--SESKMMERLWGENFFDSA 240
Query: 540 TRGFKKKPPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLSELGVTLSNAAYKLNV 599
TR + K + +R FVQF EP+ + + + + + + L +LG+ + +L
Sbjct: 241 TRKWTTKTGSPTCKRGFVQFCYEPIKIMINTCMNDQKDKLWPMLEKLGIQMKPDEKELMG 300
Query: 600 RPLLRLACSSVFGGASGFTDMLVQHIPSPRDSSSRKVDHIYTGPKDSVIYKAMKECDPSG 659
+PL++ + ++ +M++ H+PSP + +V+++Y GP D A++ CDP G
Sbjct: 301 KPLMKRVMQAWLPASTALLEMMIFHLPSPYTAQRYRVENLYEGPLDDKYAAAIRNCDPDG 360
Query: 660 PLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPEDEEDMTVKEVTKLWL 719
PLM+ V+K+ P SD F AFGRV+SG + TG VR++G Y P +++D+ VK V + +
Sbjct: 361 PLMLYVSKMIPASDKGRFFAFGRVFSGTVSTGMKVRIMGPNYVPGEKKDLYVKSVQRTVI 420
Query: 720 YQARDRIPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQFNTLPVVKTAT 779
+ + + + + P G+ V + G+D I K TL+N + + D + R ++F+ PVV+ A
Sbjct: 421 WMGKKQETVEDVPCGNTVAMVGLDQFITKNGTLTN-EKEVDAHPLRAMKFSVSPVVRVAV 480
Query: 780 EPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVE 839
+ S+LPK+VEGL++++KS P+ + +EESGEH + G GEL+++ +KDL++ +
Sbjct: 481 KCKLASDLPKLVEGLKRLAKSDPMVLCTMEESGEHIVAGAGELHIEICVKDLQDFMGGAD 540
Query: 840 VKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENSVVSLDWSRK 899
+ V+DPVVS ETV E S +++PNK N++ M A P+E GLAE I+ + K
Sbjct: 541 IIVSDPVVSLRETVFERSCRTVMSKSPNKHNRLYMEARPMEDGLAEAIDEGRIGPSDDPK 600
Query: 900 KLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQW 959
++ WD A+ IWAFGPD GPN+++D + LN +KDS+V GFQW
Sbjct: 601 IRSKILAEEFGWDKDLAKKIWAFGPDTTGPNMVVDMCKGVQ----YLNEIKDSVVAGFQW 660
Query: 960 GAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATPRLMEPVY 1019
++EGPL +E +R V +++ D + + +HRG GQ+I TARR Y+S L A PRL+EPVY
Sbjct: 661 ASKEGPLAEENMRGVCYEVCDVVLHADAIHRGCGQMISTARRAIYASQLTAKPRLLEPVY 720
Query: 1020 YVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFGFETDLRYHTQ 1079
VEIQ P + IY+VL+++RGHV ++ +PGTP Y +KA+LPV+ESFGF LR T
Sbjct: 721 MVEIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSGQLRAATS 780
Query: 1080 GQAFCLSVFDHWAIVPGDPLD 1087
GQAF VFDHW ++ DPL+
Sbjct: 781 GQAFPQCVFDHWDMMSSDPLE 788
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LNC5 | 0.0e+00 | 87.45 | 110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Arabidopsis thaliana... | [more] |
F4JWP9 | 0.0e+00 | 83.84 | 109 kDa U5 small nuclear ribonucleoprotein component GFL OS=Arabidopsis thaliana... | [more] |
Q15029 | 0.0e+00 | 62.26 | 116 kDa U5 small nuclear ribonucleoprotein component OS=Homo sapiens OX=9606 GN=... | [more] |
O08810 | 0.0e+00 | 62.39 | 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN... | [more] |
Q5R6E0 | 0.0e+00 | 62.06 | 116 kDa U5 small nuclear ribonucleoprotein component OS=Pongo abelii OX=9601 GN=... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G489 | 0.0e+00 | 100.00 | 110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Cucurbita moschata O... | [more] |
A0A6J1KJ78 | 0.0e+00 | 99.80 | 110 kDa U5 small nuclear ribonucleoprotein component CLO OS=Cucurbita maxima OX=... | [more] |
A0A0A0LI82 | 0.0e+00 | 97.49 | Tr-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009370 P... | [more] |
A0A5D3BGV4 | 0.0e+00 | 98.08 | 116 kDa U5 small nuclear ribonucleoprotein component-like protein OS=Cucumis mel... | [more] |
A0A1S3C4I3 | 0.0e+00 | 97.98 | 116 kDa U5 small nuclear ribonucleoprotein component-like OS=Cucumis melo OX=365... | [more] |
Match Name | E-value | Identity | Description | |
XP_022946650.1 | 0.0e+00 | 100.00 | 110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucurbita moschata] >X... | [more] |
XP_023546089.1 | 0.0e+00 | 99.80 | 110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucurbita pepo subsp. ... | [more] |
XP_022999292.1 | 0.0e+00 | 99.80 | 110 kDa U5 small nuclear ribonucleoprotein component CLO [Cucurbita maxima] >XP_... | [more] |
KAA0063554.1 | 0.0e+00 | 98.08 | 116 kDa U5 small nuclear ribonucleoprotein component-like protein [Cucumis melo ... | [more] |
XP_008456689.1 | 0.0e+00 | 97.98 | PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component-like [Cucumis me... | [more] |
Match Name | E-value | Identity | Description | |
AT1G06220.2 | 0.0e+00 | 87.45 | Ribosomal protein S5/Elongation factor G/III/V family protein | [more] |
AT1G06220.1 | 0.0e+00 | 87.45 | Ribosomal protein S5/Elongation factor G/III/V family protein | [more] |
AT5G25230.1 | 0.0e+00 | 83.84 | Ribosomal protein S5/Elongation factor G/III/V family protein | [more] |
AT1G56070.1 | 2.1e-174 | 38.63 | Ribosomal protein S5/Elongation factor G/III/V family protein | [more] |
AT3G12915.1 | 9.0e-170 | 38.95 | Ribosomal protein S5/Elongation factor G/III/V family protein | [more] |