CmoCh05G012070 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G012070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Rubredoxin
Location	Cmo_Chr05: 9469797 .. 9470393 (-)
RNA-Seq Expression	CmoCh05G012070
Synteny	CmoCh05G012070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTGCTGCTTATGCCTCTGCAAGACCCACTCTCTCCTTCCATCTCTCTCAACCCTCCGTTCCCAGTCCCAGATTCAACTTCAAACCCCCCCTCGTCGCCTTTCCGCCGTTGCAGAGATCGGCGGCGGCGAGACCCATCCCCATTTTCACCCTCAACTCCATCGACGTCTCCAAAGAGGACAAACCCACTTCGGACGACCCGGATTTCGCCGCGGTAGTTGGGGAAGAGGCGGCGGCGGCGGAGGAGAAGTTGGACAGGCGGCGAATGGAGGAGAAATTTGCAGTGCTGAACACGGGGATATATGAGTGCAGGTCGTGTGGGCATAAGTTCGACGAGGCGGTTGGGGATCCGACGTATCCGATAGCGCCGGGGCTGCCGTTCGAGCAGCTGCCGGAGGACTGGCGGTGCCCGACGTGTGGGGCGGCGAAGAGCTTCTTCGAGAGTAAGAGTGTGGAGATAGCGGGGTTTGCTCAGAATCAGCAGTACGGACTTGGAGGGAACACTCTGACTTCAGGTCAGAAGGCAGTGCTCATCTATGGAACCTTGTTCTTCTTCTTTGCTTTGTTCCTCTCTGGCTATTTCTTGCAATGA

mRNA sequence

ATGGCTGCTGCTGCTTATGCCTCTGCAAGACCCACTCTCTCCTTCCATCTCTCTCAACCCTCCGTTCCCAGTCCCAGATTCAACTTCAAACCCCCCCTCGTCGCCTTTCCGCCGTTGCAGAGATCGGCGGCGGCGAGACCCATCCCCATTTTCACCCTCAACTCCATCGACGTCTCCAAAGAGGACAAACCCACTTCGGACGACCCGGATTTCGCCGCGGTAGTTGGGGAAGAGGCGGCGGCGGCGGAGGAGAAGTTGGACAGGCGGCGAATGGAGGAGAAATTTGCAGTGCTGAACACGGGGATATATGAGTGCAGGTCGTGTGGGCATAAGTTCGACGAGGCGGTTGGGGATCCGACGTATCCGATAGCGCCGGGGCTGCCGTTCGAGCAGCTGCCGGAGGACTGGCGGTGCCCGACGTGTGGGGCGGCGAAGAGCTTCTTCGAGAGTAAGAGTGTGGAGATAGCGGGGTTTGCTCAGAATCAGCAGTACGGACTTGGAGGGAACACTCTGACTTCAGGTCAGAAGGCAGTGCTCATCTATGGAACCTTGTTCTTCTTCTTTGCTTTGTTCCTCTCTGGCTATTTCTTGCAATGA

Coding sequence (CDS)

ATGGCTGCTGCTGCTTATGCCTCTGCAAGACCCACTCTCTCCTTCCATCTCTCTCAACCCTCCGTTCCCAGTCCCAGATTCAACTTCAAACCCCCCCTCGTCGCCTTTCCGCCGTTGCAGAGATCGGCGGCGGCGAGACCCATCCCCATTTTCACCCTCAACTCCATCGACGTCTCCAAAGAGGACAAACCCACTTCGGACGACCCGGATTTCGCCGCGGTAGTTGGGGAAGAGGCGGCGGCGGCGGAGGAGAAGTTGGACAGGCGGCGAATGGAGGAGAAATTTGCAGTGCTGAACACGGGGATATATGAGTGCAGGTCGTGTGGGCATAAGTTCGACGAGGCGGTTGGGGATCCGACGTATCCGATAGCGCCGGGGCTGCCGTTCGAGCAGCTGCCGGAGGACTGGCGGTGCCCGACGTGTGGGGCGGCGAAGAGCTTCTTCGAGAGTAAGAGTGTGGAGATAGCGGGGTTTGCTCAGAATCAGCAGTACGGACTTGGAGGGAACACTCTGACTTCAGGTCAGAAGGCAGTGCTCATCTATGGAACCTTGTTCTTCTTCTTTGCTTTGTTCCTCTCTGGCTATTTCTTGCAATGA

Protein sequence

MAAAAYASARPTLSFHLSQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSKEDKPTSDDPDFAAVVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIYGTLFFFFALFLSGYFLQ

Homology

[Close]

BLAST of CmoCh05G012070 vs. ExPASy Swiss-Prot
Match: P73068 (Rubredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rub PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.5e-19
Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 86  LDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAK 145
           +  R  E+  A L +  +ECR+CG+ +  + GD    ++PG PFE LP +W+CP CGA +
Sbjct: 1   MSERPPEKTLAELASPNHECRACGYVYIPSQGDQKTSVSPGTPFEALPLNWKCPVCGAPR 60

Query: 146 SFFESKSVEIA--GFAQNQQYGLGGNTLTSGQKAVLIYGTLFFFFALFLSGY 196
           ++F S     A  GFA+N  YG G N ++ G+K +LI+G+LF  F  FLS Y
Sbjct: 61  NYFISTGETDAPSGFAENLNYGFGFNRMSGGKKNLLIFGSLFVIFLFFLSLY 112

[Close]

BLAST of CmoCh05G012070 vs. ExPASy Swiss-Prot
Match: Q9XBL8 (Rubredoxin OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rub PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17
Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 0


Query: 96  AVLNTGI--YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--K 155
           AV NT +  +ECRSCG+ ++   GD  + IAP  PF +LP +WRCP C A K+ F +   
Sbjct: 5   AVENTVLDRFECRSCGYVYEPEKGDSKHDIAPETPFAELPINWRCPVCTAKKAAFSNIGP 64

Query: 156 SVEIAGFAQNQQYGLGGNTLTSGQKAVLIYGTLFFFFALFLSGYFLQ 199
           +   +GF +N  YGLG N LT  QK +LI+G L   F  F+S Y LQ
Sbjct: 65  AGTASGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111

[Close]

BLAST of CmoCh05G012070 vs. ExPASy Swiss-Prot
Match: Q9WWN1 (Rubredoxin OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rub PE=3 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-17
Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 0


Query: 96  AVLNTGI--YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--K 155
           AV NT +  +ECRSCG+ ++   GD  + IAP  PF +LP +WRCP C A K+ F +   
Sbjct: 5   AVENTVLDRFECRSCGYVYEPEKGDNKHDIAPETPFAELPINWRCPVCTAKKAAFTNIGP 64

Query: 156 SVEIAGFAQNQQYGLGGNTLTSGQKAVLIYGTLFFFFALFLSGYFLQ 199
           +   +GF +N  YGLG N LT  QK +LI+G L   F  F+S Y LQ
Sbjct: 65  AGTASGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111

[Close]

BLAST of CmoCh05G012070 vs. ExPASy Swiss-Prot
Match: P00270 (Rubredoxin OS=Desulfovibrio gigas OX=879 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.3e-11
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 102 IYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESK 152
           IY C  CG+++D A GDP   I PG  FE LP+DW CP CGA+K  FE +
Sbjct: 3   IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAFEKQ 52

[Close]

BLAST of CmoCh05G012070 vs. ExPASy Swiss-Prot
Match: Q9FDN6 (High molecular weight rubredoxin OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=hrb PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.1e-10
Identity = 26/47 (55.32%), Postives = 30/47 (63.83%), Query Frame = 0


Query: 103 YECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFE 150
           Y+C  C + +D   GDP + IAPG PF  LPEDW CP CGA K  FE
Sbjct: 181 YQCTICNYVYDPVQGDPEHGIAPGTPFADLPEDWTCPICGAGKDAFE 227

[Close]

BLAST of CmoCh05G012070 vs. ExPASy TrEMBL
Match: A0A6J1G4B1 (uncharacterized protein LOC111450624 OS=Cucurbita moschata OX=3662 GN=LOC111450624 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 7.2e-107
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MAAAAYASARPTLSFHLSQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSK 60
           MAAAAYASARPTLSFHLSQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSK
Sbjct: 1   MAAAAYASARPTLSFHLSQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSK 60

Query: 61  EDKPTSDDPDFAAVVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDPT 120
           EDKPTSDDPDFAAVVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDPT
Sbjct: 61  EDKPTSDDPDFAAVVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDPT 120

Query: 121 YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI 180
           YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI
Sbjct: 121 YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI 180

Query: 181 YGTLFFFFALFLSGYFLQ 199
           YGTLFFFFALFLSGYFLQ
Sbjct: 181 YGTLFFFFALFLSGYFLQ 198

[Close]

BLAST of CmoCh05G012070 vs. ExPASy TrEMBL
Match: A0A6J1KAE6 (uncharacterized protein LOC111493686 OS=Cucurbita maxima OX=3661 GN=LOC111493686 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 7.7e-101
Identity = 189/196 (96.43%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 3   AAAYASARPTLSFHLSQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSKED 62
           A +YASARPTLSFHL QPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSKED
Sbjct: 2   ATSYASARPTLSFHLYQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSKED 61

Query: 63  KPTSDDPDFAAVVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDPTYP 122
           KPTSDDPD AAVVGEE  AAEEKLDRRR+EEKFAVLNTGIYECRSCGHKFDEAVGDPTYP
Sbjct: 62  KPTSDDPDLAAVVGEE-EAAEEKLDRRRIEEKFAVLNTGIYECRSCGHKFDEAVGDPTYP 121

Query: 123 IAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIYG 182
           IAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIYG
Sbjct: 122 IAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIYG 181

Query: 183 TLFFFFALFLSGYFLQ 199
           TLFFFFALFLSGYFLQ
Sbjct: 182 TLFFFFALFLSGYFLQ 196

[Close]

BLAST of CmoCh05G012070 vs. ExPASy TrEMBL
Match: A0A1S4E0U3 (uncharacterized protein LOC103499548 OS=Cucumis melo OX=3656 GN=LOC103499548 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.9e-87
Identity = 169/199 (84.92%), Postives = 179/199 (89.95%), Query Frame = 0


Query: 4   AAYASARPTLSFHLSQPSVPSPRFNFKPPLVA-FPPLQRSAAARPIPIFTLNSIDVSKED 63
           A Y+SARPTLSFHLSQPS+P PRFNFKPP+ A  PPLQR +AARPI IFTLNSIDVSKED
Sbjct: 80  AVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKED 139

Query: 64  KPTSDDPDFAA---VVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDP 123
           KPTSDDP+  +   VV  E    EEK D+RR+EE+FAVLNTGIYECRSCGHKFDEAVGDP
Sbjct: 140 KPTSDDPNTPSPPPVVAVE--KEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDP 199

Query: 124 TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL 183
           TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL
Sbjct: 200 TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL 259

Query: 184 IYGTLFFFFALFLSGYFLQ 199
           IYG+L FFFALFLSGYFLQ
Sbjct: 260 IYGSLLFFFALFLSGYFLQ 276

[Close]

BLAST of CmoCh05G012070 vs. ExPASy TrEMBL
Match: A0A5A7VDM5 (Rubredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001210 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.9e-87
Identity = 169/199 (84.92%), Postives = 179/199 (89.95%), Query Frame = 0


Query: 4   AAYASARPTLSFHLSQPSVPSPRFNFKPPLVA-FPPLQRSAAARPIPIFTLNSIDVSKED 63
           A Y+SARPTLSFHLSQPS+P PRFNFKPP+ A  PPLQR +AARPI IFTLNSIDVSKED
Sbjct: 2   AVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKED 61

Query: 64  KPTSDDPDFAA---VVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDP 123
           KPTSDDP+  +   VV  E    EEK D+RR+EE+FAVLNTGIYECRSCGHKFDEAVGDP
Sbjct: 62  KPTSDDPNTPSPPPVVAVE--KEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDP 121

Query: 124 TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL 183
           TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL
Sbjct: 122 TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL 181

Query: 184 IYGTLFFFFALFLSGYFLQ 199
           IYG+L FFFALFLSGYFLQ
Sbjct: 182 IYGSLLFFFALFLSGYFLQ 198

[Close]

BLAST of CmoCh05G012070 vs. ExPASy TrEMBL
Match: E5GBR8 (Rubredoxin OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.9e-87
Identity = 169/199 (84.92%), Postives = 179/199 (89.95%), Query Frame = 0


Query: 4   AAYASARPTLSFHLSQPSVPSPRFNFKPPLVA-FPPLQRSAAARPIPIFTLNSIDVSKED 63
           A Y+SARPTLSFHLSQPS+P PRFNFKPP+ A  PPLQR +AARPI IFTLNSIDVSKED
Sbjct: 2   AVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKED 61

Query: 64  KPTSDDPDFAA---VVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDP 123
           KPTSDDP+  +   VV  E    EEK D+RR+EE+FAVLNTGIYECRSCGHKFDEAVGDP
Sbjct: 62  KPTSDDPNTPSPPPVVAVE--KEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDP 121

Query: 124 TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL 183
           TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL
Sbjct: 122 TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL 181

Query: 184 IYGTLFFFFALFLSGYFLQ 199
           IYG+L FFFALFLSGYFLQ
Sbjct: 182 IYGSLLFFFALFLSGYFLQ 198

[Close]

BLAST of CmoCh05G012070 vs. NCBI nr
Match: XP_022946609.1 (uncharacterized protein LOC111450624 [Cucurbita moschata] >KAG7030288.1 rub, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396.4 bits (1017), Expect = 1.5e-106
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MAAAAYASARPTLSFHLSQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSK 60
           MAAAAYASARPTLSFHLSQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSK
Sbjct: 1   MAAAAYASARPTLSFHLSQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSK 60

Query: 61  EDKPTSDDPDFAAVVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDPT 120
           EDKPTSDDPDFAAVVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDPT
Sbjct: 61  EDKPTSDDPDFAAVVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDPT 120

Query: 121 YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI 180
           YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI
Sbjct: 121 YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLI 180

Query: 181 YGTLFFFFALFLSGYFLQ 199
           YGTLFFFFALFLSGYFLQ
Sbjct: 181 YGTLFFFFALFLSGYFLQ 198

[Close]

BLAST of CmoCh05G012070 vs. NCBI nr
Match: XP_023545844.1 (uncharacterized protein LOC111805157 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.9 bits (995), Expect = 5.3e-104
Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MAAAAYASARPTLSFHLSQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSK 60
           MAAAAYASARPTLSFHLSQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSK
Sbjct: 1   MAAAAYASARPTLSFHLSQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSK 60

Query: 61  EDKPTSDDPDFAAVVGEEAA-AAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDP 120
           EDKPTS+DPD AAVVGEEAA AAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDP
Sbjct: 61  EDKPTSEDPDLAAVVGEEAAEAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDP 120

Query: 121 TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL 180
           TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL
Sbjct: 121 TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL 180

Query: 181 IYGTLFFFFALFLSGYFLQ 199
           IYGTLFFFFALFLSGYFLQ
Sbjct: 181 IYGTLFFFFALFLSGYFLQ 199

[Close]

BLAST of CmoCh05G012070 vs. NCBI nr
Match: XP_022999262.1 (uncharacterized protein LOC111493686 [Cucurbita maxima])

HSP 1 Score: 376.3 bits (965), Expect = 1.6e-100
Identity = 189/196 (96.43%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 3   AAAYASARPTLSFHLSQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSKED 62
           A +YASARPTLSFHL QPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSKED
Sbjct: 2   ATSYASARPTLSFHLYQPSVPSPRFNFKPPLVAFPPLQRSAAARPIPIFTLNSIDVSKED 61

Query: 63  KPTSDDPDFAAVVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDPTYP 122
           KPTSDDPD AAVVGEE  AAEEKLDRRR+EEKFAVLNTGIYECRSCGHKFDEAVGDPTYP
Sbjct: 62  KPTSDDPDLAAVVGEE-EAAEEKLDRRRIEEKFAVLNTGIYECRSCGHKFDEAVGDPTYP 121

Query: 123 IAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIYG 182
           IAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIYG
Sbjct: 122 IAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIYG 181

Query: 183 TLFFFFALFLSGYFLQ 199
           TLFFFFALFLSGYFLQ
Sbjct: 182 TLFFFFALFLSGYFLQ 196

[Close]

BLAST of CmoCh05G012070 vs. NCBI nr
Match: XP_038891199.1 (rubredoxin [Benincasa hispida])

HSP 1 Score: 335.5 bits (859), Expect = 3.1e-88
Identity = 171/204 (83.82%), Postives = 179/204 (87.75%), Query Frame = 0


Query: 4   AAYASARPTLSFHLSQPSVPSPRFNFKPP---------LVAFPPLQRSAAARPIPIFTLN 63
           AAY+SARPTLSFHLSQPS+P PRFNFKPP         + A PPLQRSAAARP  IFTLN
Sbjct: 2   AAYSSARPTLSFHLSQPSLPIPRFNFKPPASASAAAATVPAVPPLQRSAAARPNSIFTLN 61

Query: 64  SIDVSKEDKPTSDDPDFAAVVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDE 123
           SIDVSKEDKPTSDDP+  +     A   EEK D+RR+EEKFAVLNTGIYECRSCGHKFDE
Sbjct: 62  SIDVSKEDKPTSDDPNTPSPPPVVAVDEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDE 121

Query: 124 AVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSG 183
           AVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSG
Sbjct: 122 AVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSG 181

Query: 184 QKAVLIYGTLFFFFALFLSGYFLQ 199
           QKAVLIYG+LFFFFALFLSGYFLQ
Sbjct: 182 QKAVLIYGSLFFFFALFLSGYFLQ 205

[Close]

BLAST of CmoCh05G012070 vs. NCBI nr
Match: ADN33910.1 (rubredoxin [Cucumis melo subsp. melo] >KAA0063629.1 rubredoxin [Cucumis melo var. makuwa] >TYK18397.1 rubredoxin [Cucumis melo var. makuwa])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 169/199 (84.92%), Postives = 179/199 (89.95%), Query Frame = 0


Query: 4   AAYASARPTLSFHLSQPSVPSPRFNFKPPLVA-FPPLQRSAAARPIPIFTLNSIDVSKED 63
           A Y+SARPTLSFHLSQPS+P PRFNFKPP+ A  PPLQR +AARPI IFTLNSIDVSKED
Sbjct: 2   AVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIPPLQRLSAARPISIFTLNSIDVSKED 61

Query: 64  KPTSDDPDFAA---VVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDP 123
           KPTSDDP+  +   VV  E    EEK D+RR+EE+FAVLNTGIYECRSCGHKFDEAVGDP
Sbjct: 62  KPTSDDPNTPSPPPVVAVE--KEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVGDP 121

Query: 124 TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL 183
           TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL
Sbjct: 122 TYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVL 181

Query: 184 IYGTLFFFFALFLSGYFLQ 199
           IYG+L FFFALFLSGYFLQ
Sbjct: 182 IYGSLLFFFALFLSGYFLQ 198

[Close]

BLAST of CmoCh05G012070 vs. TAIR 10
Match: AT1G54500.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 201.4 bits (511), Expect = 6.6e-52
Identity = 92/121 (76.03%), Postives = 106/121 (87.60%), Query Frame = 0


Query: 78  EAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWR 137
           E    E+ +++RRMEEKFAVLNTGIYECRSCG+K+DE+ GDP+YPI PG  F++LPEDWR
Sbjct: 75  ETKEVEDTIEKRRMEEKFAVLNTGIYECRSCGYKYDESAGDPSYPIPPGFQFDKLPEDWR 134

Query: 138 CPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAVLIYGTLFFFFALFLSGYFL 197
           CPTCGAA+SFFESK VEIAGFAQNQQYGLGGN LTSGQK  LI+G+L  FFALFLSGYF+
Sbjct: 135 CPTCGAAQSFFESKMVEIAGFAQNQQYGLGGNALTSGQKTGLIFGSLLLFFALFLSGYFI 194

Query: 198 Q 199
           Q
Sbjct: 195 Q 195

The following BLAST results are available for this feature:

BLAST of CmoCh05G012070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P73068	2.5e-19	41.96	Rubredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rub PE=...	[more]
Q9XBL8	2.3e-17	45.79	Rubredoxin OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=...	[more]
Q9WWN1	3.9e-17	45.79	Rubredoxin OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=...	[more]
P00270	9.3e-11	54.00	Rubredoxin OS=Desulfovibrio gigas OX=879 PE=1 SV=1	[more]
Q9FDN6	2.1e-10	55.32	High molecular weight rubredoxin OS=Moorella thermoacetica (strain ATCC 39073 / ...	[more]

BLAST of CmoCh05G012070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4B1	7.2e-107	100.00	uncharacterized protein LOC111450624 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]
A0A6J1KAE6	7.7e-101	96.43	uncharacterized protein LOC111493686 OS=Cucurbita maxima OX=3661 GN=LOC111493686...	[more]
A0A1S4E0U3	4.9e-87	84.92	uncharacterized protein LOC103499548 OS=Cucumis melo OX=3656 GN=LOC103499548 PE=...	[more]
A0A5A7VDM5	4.9e-87	84.92	Rubredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001210 PE...	[more]
E5GBR8	4.9e-87	84.92	Rubredoxin OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of CmoCh05G012070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946609.1	1.5e-106	100.00	uncharacterized protein LOC111450624 [Cucurbita moschata] >KAG7030288.1 rub, par...	[more]
XP_023545844.1	5.3e-104	98.49	uncharacterized protein LOC111805157 [Cucurbita pepo subsp. pepo]	[more]
XP_022999262.1	1.6e-100	96.43	uncharacterized protein LOC111493686 [Cucurbita maxima]	[more]
XP_038891199.1	3.1e-88	83.82	rubredoxin [Benincasa hispida]	[more]
ADN33910.1	1.0e-86	84.92	rubredoxin [Cucumis melo subsp. melo] >KAA0063629.1 rubredoxin [Cucumis melo var...	[more]

BLAST of CmoCh05G012070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54500.1	6.6e-52	76.03	Rubredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024935	Rubredoxin domain	PRINTS	PR00163	RUBREDOXIN	coord: 132..148 score: 57.12 coord: 102..118 score: 44.12
IPR024935	Rubredoxin domain	PFAM	PF00301	Rubredoxin	coord: 103..148 e-value: 1.9E-17 score: 63.0
IPR024935	Rubredoxin domain	CDD	cd00730	rubredoxin	coord: 103..149 e-value: 9.43209E-22 score: 81.9686
None	No IPR available	GENE3D	2.20.28.10		coord: 95..150 e-value: 1.1E-21 score: 78.3
None	No IPR available	PIRSR	PIRSR000071-1	PIRSR000071-1	coord: 103..150 e-value: 8.8E-19 score: 65.0
None	No IPR available	PANTHER	PTHR47627	RUBREDOXIN	coord: 3..198
None	No IPR available	SUPERFAMILY	57802	Rubredoxin-like	coord: 99..165
IPR018527	Rubredoxin, iron-binding site	PROSITE	PS00202	RUBREDOXIN	coord: 132..142
IPR024934	Rubredoxin-like domain	PROSITE	PS50903	RUBREDOXIN_LIKE	coord: 100..151 score: 13.153681

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G012070.1	CmoCh05G012070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043448	alkane catabolic process
biological_process	GO:0022900	electron transport chain
biological_process	GO:0010207	photosystem II assembly
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0046872	metal ion binding