CmoCh05G011710 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G011710
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
Location	Cmo_Chr05: 9241107 .. 9247353 (-)
RNA-Seq Expression	CmoCh05G011710
Synteny	CmoCh05G011710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGATATGAAAGCTATCCTAATTTCCCTATGGCCCTTCTTCTTTCTTTATGCCTCCACCCTCCAAACCTTCAGCAAAACCCCACCGCCGCCGTCCCCCACCCGACCACCGTCGGATTTCACGAGCCTACAACGCTGAATTCCAATTCCAAGAGACATTTCATCCTCAAAACGGCTTCACTCTGTCTAATTTCATTGATTCCAAAATGCCCAGTTGCCCAATCTTCCCAAATTTCGCCTACTTCGAAACAAGGCCTTCCTGGCCTTGCAAATACAAAGTCTTGGTTTCAGTTTTATGGTGATGGGTTCTCCATCCGTGTGCCGCCTCAGTTTGAAGACCTCACGGAGCCTGAGGTATGAACAAAATACCTCACTGGTTTCTGTTTGTTTAATCGTAGTGTTGTGTGTGTTACCTCTGCTTCCACCAATAGTTTAAGGTTATTTACGCTTCATATTTGTTTGGAAACACACATGTTTAGTTGCTGTTAATGTCAATGGCATTAAGCAGAAGGCTCCAGCTTCAGGGCTTTGAGAATACCCCTTAATGTTTTGATGGGGAATTCTAACTTCAGGCTTTAGAATTATTAATTGGCGTTGCTAGGTGGGGTTGAGAAACAGAGTCAGATTTCGTTCGGTATCAGGTTCTGGCCATTTCGGGGTTCTTGGACTGTGAGATCCCACATCGGTGGGAGAGGAGAACGAAGCATTCCTTGTAAGGGTGTGGAAACCTTTCCCTAACAAACGTGTTCTAAAACCTTGAGGGGAAACCCGGAAGGAAAGCCTAAACAGAACAATATCTGCCAGTGGTGGGCTTGGCACAGGGCGGTGTGCCAACGAGGACGTTGGGTCCCCAAGGAGGTGGATTGTGAGATCCCACAACGGTTGGAGAGGAAAACGAAGCATTCCTTATAAAGGTGTGGAAACCTCTACCTAGCATACGCGTTTTTTGAGGGGAAACCTAAAGGGAAAGCCTAAAGAGGAAAATATCTGCTAGCGGTGGGCTTGGTACTGGGTGGTGTGCCAATGAGGACGTTGGTTCCCAAGGGGGGTGTATTGTGAAATTCCACATCGGTTGGAGAGGAGAACGAAGCATTTCTTACAAGCGTGTGAAAACCTCTCTCTAGCAGACGCGTTTTAAAACCTTAAGAGGAAACCTGAAGGGAAAGCCCAAAGAGGACAATACTGGTACATGGACAACTGTGTGGACCAATGGGCTTAATCTACTAGCGGTGTGCCAACGGGGATGTTGGGCCCCAAGGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGGAGAATGAAGCAATACTTATAAGAGTGTAGAAACCTCACCCTAGCAAACGCGTTATAAACCTCGAGGGGAAACCTAAAGGGAAAACCCAAATAGGACAATATCTGCTAGTGGTGGGTTTGGGACCGGGCGGTGTGCCAGCGAGGACCTTGGGCCCTTAAGGGAGGTGGATTGTGAGATCCCAAATCAGTTAGAGAGGAGAATGAAGCATTCCTTATAAGGGCGTAGAAACCTCTCCCTAGCAGACATGTCTTAAAACCTCGAGGGAAAACTCGAAGGGAAGTCCAAAAAGAACAATATCTCCGCAGTGGGCATGCGTTGAATTTTTTCTTGATTTTATTAGTGTATTCCACACAAGAGCTTGATGTGATCTTCATGTAAAGAAACAACAGCTACTAATTAGACTATATCTTTGTTCAACTCCTCTCCTACCTTTAGGCATTCTTATAACTATTCCCTTATGCTCGGTAGCTGTGGCCTTTCCTTGTACTTGTAAAAGGCTTATCATTTGCAGCTCGCTAAGTTATGTGCTTGGGGCTTGTAGGATTTCAATGCTGGACTCTCTCTTTATGGAGATAAGGTAAAAACGAAAACGTTCGCAGCTCGGTTTGGATCTCCTGATGGGTAATGATATTTCTTAGTTCATATTGTTTGCTTTATGTATTTGGCTTATATTCATTCTGCTTTGTTCGTTAACACAGCTCTGAAGTTCTAAGCGTTGTCACTCGTCCAACGAATCAGCTTAAGATCACCTTTCTAGAGGTAGCACAATGATGGCTGTGAAGTTTTCATTTGGTAATTCTAAAGAGCATCAATTTCTTACTAAATAGTTCATATCTAGCAAACCGTTTCTAAGCTCGGTGGCTCTTTCGTACTAAGAAGCTCTACCTAGAGAAAATCCCCATCAAATCTTAAACTGTTAAGTCATGTTTTGGAGCTTTTAAGCCCAAGATTGTTTGCTTACTGTTAACTCTGAGCTTCCCAAAGAGGTTTTTGAAGTTTCTAGTCACAAACTTTGATAAAAAGATTCTGTTTTAGTTCTACGTACGTGCTTATTGAGTTATGTTCGTGTTTTATGGATAACGGTTTTAGGAGCTTTTCGTTTTTTCTTGCGAAAAACAGGCGAAAGATATAACTGATATAGGTTCCTTGAGGGAGGCTGCAAAAATCTTTGTTCCAGGTACACATTTTGTGTTCAATATGCTAAGTAACTTTTTTGTGGTCATTTGGCTACACATCTCATTCTAGCTATTGGTTTTGGTGTTCTGACAATGATAGGTGGTGCAACGTTATTTTCGGCCCGAACGTTTAAAATTAAGGACGATGAAGGTTTCAGGTAACTATGCTACCAAGGCGTCCTTTGCTAGTTCGATTTATTTGTATCTTTTCGAGCTTTGATTCAGATCAATGAAACAATGGAATTGGATAAACAAAATGAAGAAAAGCCCACTTTAGAAAGAGCTTGTAGAAAGAAAGTCGACTTGAGATTACGAAAATGGCTGTGGTTGTTGAGAAGAAGAGGCAAAGGCTAGTTATAGAAATCCTTAGAAATCAAAACTCTAGAAAGGAAGAAACCTAACCATAGAACACGCCTCTCAAAGGGCTCACAAGCTATCTAAAGGGCGGATCGATTGTTCCACAAAATAGGAAGTGTCGGTACACCAAAGAGTCCATCATTGAGCGATAGATTGAATGAGTTCAAGCTATGGTAGCCATGTACCGGAGGTTTATTGTAACAACCCAGATCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTGCCCTCAAGGCTTTAAAACGCGTCTAATAGGGGAAGGTTTCCACAGCCTTATAAATGGTGGTTTGTTCTCCTCCTCAACCAATGTGGGACATCACAATCCACCCCCCTTCGGGGCCCAGCATCCTCGCTGGCACTCTTTCCTTCCTCCAATCGATGTGGAACCGCCCCCAAATCCACCCCCCTTGGGGCCCAGCGTCCTTACTAGCACACCGCCTTGTGTCTACCCCCCTTCGAGGAACAGCAAGAAGGTTGGCACATCGTCCGGTGTCTGGCTCTGATACCATTTGTAATGACCTAGATCCACCGCTAGCAAATATTGTTCTCTTTGGGTTTTCCCTTTCGGGCTCGCCCTCAAGGCTTTAAAACGCGTCTGCTTGGGGAAGGTTTCCACACCTTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACATTTATATTTTACGAGTTTTCTTGGCAACCAAGTATGATAGGGTTAGACAACCGTCTTAAGGTTTAGATGGAATGAGTTCAAGCTATTGTAGCCATGAACCTGCGGTTTATATTCTACGAGTTTTCTTGGCAACCAAGTATGATAGGGTTAGACAGTTGTTGAAGTTAGTGGATCCTAACTCACACTCAAGAACATAAACAATGCTATGAAATAATAATCTAGATCTAGTCTTCTTTGCCTATATAAGCTTTCATATTTCCATTTGATTACCTCTGTTTCGTTAAATTCAGGACGTATTACTTCTACGAGTTTGGGAAGAACGAAGAACACGTCGCGTTAGTAGCAACTGTTAATAGTGGACAGGTTTGTGATATACAATTTACCTTACATACTAAACTTCTTACTCTGATGAAGACCTGAGTTTGAGCCATTTCACTTGCTTTATGACATTTGGATGAAATTATAAAATGGTAGAACTTGTATGAATAAGAGTTGATTCAAAGTTAAATTGTTCATGCCAAAGGTCTTACTCATTGATATGTGTAGAGTTTTATATCCACCTCAGTTGAAGAGAGAAACGAAGCATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGAAGATGCGTTTTAAAACCTTGAGGGAAGCCCAGAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTAGGCTTGGGCTGTTACAAATGGTATCAGAACCAGACACCGAACGGTGTGCCAGCGAGGACACTGGGCTCCCAAAGGGGATGGATTGTGAGATCCCACATCGATTTGAGAGAGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCGCCCTAGAAAACGCATTTTAAAACTTTGAGGGGAAACCCAGAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGTGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACGTCGAGCGGTGTGCCAGCGAGAATGCTGCGCTCCCAAGGGGGGTGGATTGTGAGATCCCATATCGGTTGGAGAAGAGAACAAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCATAGAAAATGCATTTTAAAACCTTGAGGGAAATCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTAGGCTATTACAAATGGTATCAGAACCAGATACCGAACGGTGTGCCAACGAGGACGTTGGGCTCCCAAAGGGTGTGAATTGTGAGATCCCACATCGATTGGAGAGAGAAACGAAGCATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTAAACGCGTTTTAAAACTTTGAGGGGAAGCCTAGAAGGGAAAGTCCAAAGAGGTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGAGCGGTGTGCCAGCGAGAACGTTGGGCTCCCAAGGGGATGAGATTGTGAAATCCCATATCGGTTGGAGAGGAGAACGAAGCACTTCTTATAAGGGTGTGGAAACCTCTCCCTAGGAAATGCATTTTAAAACCTTGAGAGGAAGTCCATAAGGAAAAACCCAAAGAGGACAATATCTGCTAGCGGTAGGCTTGGGCAGTTACAAACTCGTCCAATTTATCTTGACATATCGTCTTCTTTGTCGTAGGCGTTTGTTGCCGGAGCAACCGCACCATTGTCCAAATGGGATGAAGATGGCATAAAACTCCGTTCTGCTGCTATATCTCTAACCGTGCTATAATCAATTGCTGATCAAGTTATTTTCATTAGCTTGTGAGTACTCCCCAAAACTTTACACTCATGAATTGAATATCATATAAAATCTCGAATAAATTATAAATTTATATCGTGAACTTTGAATATTGTGCCTATTTAATCCGTAAACTTCAAAAAAAATATGATTTATGTTCCTTAACTCTTGATGATGCTCGTATTTAGCTGCTAAATTAATACCGTTAACGACATGCTCGTAACATTAATATTGATTGAGTTGACATGATATGCTGAACTAAATTATCGTAGTGTTCAATATCTAGAGAATATAATCGAACCTAAAATCTTCGTTACGATGAGCATGAAGTAAACTATTCTACGACCACTAGGCCTTAATGAACTTCATTTTAACATCACTCGACCTTTTGTAACTATGATCTTAGTTTGATTAGGTTGGATTGGAACACTTTCTTCGTTCATTTCTTTCCATGAAAACTCGGTTTCTTGCGAAACAAACGGACGTTTAAGATCCTATTGCTGTTTCTACAGATTGTTTAAACTTAATTTGTGAGAATTGTTTGATTGTGAGTGACCCTTCAATCTCTTGAACGGACAGGAGGAAGCTTTTGGTAAGTCCCCCAGTTGGCAGAGAGACAGCTAGATTTGTGTATACATTTTTGTAAGAATTGTACTTTGAAATGGGTATGCTGAGTGATGAGTGGTGCTTGATTAATGTGGTACCCTTTGTTCTTATATGATTGTTGTCAAACTTGAACTCGTTTTTTCTCTTTTGATAAGGTATATAGAGATGTCCACGGGATGGAGAGTGGAGACCGGGAAGCTTTCCTTGTCTCTGTCTACATCTCTTGTTTATGTAACAGTTTAAGTTCACCGCTAATGGATATTGTCTACTTTGGTCTATTACGTATCGCTATCAGCCTTATGGTTTTAAAACGTGTCTACTAAGGAGAGGTTTCCATACCCTTGTAAGGAATGTCTCATTCCCCTCTCCAATCCACCCCCTTCGGGCCCAGCGCCCTTGCTGGC

mRNA sequence

GGATATGAAAGCTATCCTAATTTCCCTATGGCCCTTCTTCTTTCTTTATGCCTCCACCCTCCAAACCTTCAGCAAAACCCCACCGCCGCCGTCCCCCACCCGACCACCGTCGGATTTCACGAGCCTACAACGCTGAATTCCAATTCCAAGAGACATTTCATCCTCAAAACGGCTTCACTCTGTCTAATTTCATTGATTCCAAAATGCCCAGTTGCCCAATCTTCCCAAATTTCGCCTACTTCGAAACAAGGCCTTCCTGGCCTTGCAAATACAAAGTCTTGGTTTCAGTTTTATGGTGATGGGTTCTCCATCCGTGTGCCGCCTCAGTTTGAAGACCTCACGGAGCCTGAGGATTTCAATGCTGGACTCTCTCTTTATGGAGATAAGGTAAAAACGAAAACGTTCGCAGCTCGGTTTGGATCTCCTGATGGCTCTGAAGTTCTAAGCGTTGTCACTCGTCCAACGAATCAGCTTAAGATCACCTTTCTAGAGGCGAAAGATATAACTGATATAGGTTCCTTGAGGGAGGCTGCAAAAATCTTTGTTCCAGGTGGTGCAACGTTATTTTCGGCCCGAACGTTTAAAATTAAGGACGATGAAGGTTTCAGGACGTATTACTTCTACGAGTTTGGGAAGAACGAAGAACACGTCGCGTTAGTAGCAACTGTTAATAGTGGACAGGCGTTTGTTGCCGGAGCAACCGCACCATTGTCCAAATGGGATGAAGATGGCATAAAACTCCGTTCTGCTGCTATATCTCTAACCGTGCTATAATCAATTGCTGATCAAGTTATTTTCATTAGCTTGAGGAAGCTTTTGGTAAGTCCCCCAGTTGGCAGAGAGACAGCTAGATTTGTGTATACATTTTTGTAAGAATTGTACTTTGAAATGGGTATGCTGAGTGATGAGTGGTGCTTGATTAATGTGGTACCCTTTGTTCTTATATGATTGTTGTCAAACTTGAACTCGTTTTTTCTCTTTTGATAAGGTATATAGAGATGTCCACGGGATGGAGAGTGGAGACCGGGAAGCTTTCCTTGTCTCTGTCTACATCTCTTGTTTATGTAACAGTTTAAGTTCACCGCTAATGGATATTGTCTACTTTGGTCTATTACGTATCGCTATCAGCCTTATGGTTTTAAAACGTGTCTACTAAGGAGAGGTTTCCATACCCTTGTAAGGAATGTCTCATTCCCCTCTCCAATCCACCCCCTTCGGGCCCAGCGCCCTTGCTGGC

Coding sequence (CDS)

ATGGCCCTTCTTCTTTCTTTATGCCTCCACCCTCCAAACCTTCAGCAAAACCCCACCGCCGCCGTCCCCCACCCGACCACCGTCGGATTTCACGAGCCTACAACGCTGAATTCCAATTCCAAGAGACATTTCATCCTCAAAACGGCTTCACTCTGTCTAATTTCATTGATTCCAAAATGCCCAGTTGCCCAATCTTCCCAAATTTCGCCTACTTCGAAACAAGGCCTTCCTGGCCTTGCAAATACAAAGTCTTGGTTTCAGTTTTATGGTGATGGGTTCTCCATCCGTGTGCCGCCTCAGTTTGAAGACCTCACGGAGCCTGAGGATTTCAATGCTGGACTCTCTCTTTATGGAGATAAGGTAAAAACGAAAACGTTCGCAGCTCGGTTTGGATCTCCTGATGGCTCTGAAGTTCTAAGCGTTGTCACTCGTCCAACGAATCAGCTTAAGATCACCTTTCTAGAGGCGAAAGATATAACTGATATAGGTTCCTTGAGGGAGGCTGCAAAAATCTTTGTTCCAGGTGGTGCAACGTTATTTTCGGCCCGAACGTTTAAAATTAAGGACGATGAAGGTTTCAGGACGTATTACTTCTACGAGTTTGGGAAGAACGAAGAACACGTCGCGTTAGTAGCAACTGTTAATAGTGGACAGGCGTTTGTTGCCGGAGCAACCGCACCATTGTCCAAATGGGATGAAGATGGCATAAAACTCCGTTCTGCTGCTATATCTCTAACCGTGCTATAA

Protein sequence

MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRSAAISLTVL

Homology

[Close]

BLAST of CmoCh05G011710 vs. ExPASy TrEMBL
Match: A0A6J1G382 (uncharacterized protein LOC111450417 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450417 PE=4 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 1.7e-137
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC 60
           MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC
Sbjct: 1   MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC 60

Query: 61  PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK 120
           PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK
Sbjct: 61  PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK 120

Query: 121 VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLF 180
           VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLF
Sbjct: 121 VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLF 180

Query: 181 SARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRS 240
           SARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRS
Sbjct: 181 SARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRS 240

Query: 241 AAISLTVL 249
           AAISLTVL
Sbjct: 241 AAISLTVL 248

[Close]

BLAST of CmoCh05G011710 vs. ExPASy TrEMBL
Match: A0A6J1KC82 (uncharacterized protein LOC111493605 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493605 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.2e-135
Identity = 244/245 (99.59%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 4   LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVA 63
           LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILK+ASLCLISLIPKCPVA
Sbjct: 3   LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKSASLCLISLIPKCPVA 62

Query: 64  QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT 123
           QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT
Sbjct: 63  QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT 122

Query: 124 KTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSAR 183
           KTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSAR
Sbjct: 123 KTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSAR 182

Query: 184 TFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRSAAI 243
           TFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRSAAI
Sbjct: 183 TFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRSAAI 242

Query: 244 SLTVL 249
           SLTVL
Sbjct: 243 SLTVL 247

[Close]

BLAST of CmoCh05G011710 vs. ExPASy TrEMBL
Match: A0A6J1G3F8 (uncharacterized protein LOC111450417 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450417 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 4.6e-135
Identity = 248/258 (96.12%), Postives = 248/258 (96.12%), Query Frame = 0


Query: 1   MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC 60
           MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC
Sbjct: 1   MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC 60

Query: 61  PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK 120
           PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK
Sbjct: 61  PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK 120

Query: 121 VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE----------AKDITDIGSLREAAK 180
           VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE          AKDITDIGSLREAAK
Sbjct: 121 VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEELFVFSCEKQAKDITDIGSLREAAK 180

Query: 181 IFVPGGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSK 240
           IFVPGGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSK
Sbjct: 181 IFVPGGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSK 240

Query: 241 WDEDGIKLRSAAISLTVL 249
           WDEDGIKLRSAAISLTVL
Sbjct: 241 WDEDGIKLRSAAISLTVL 258

[Close]

BLAST of CmoCh05G011710 vs. ExPASy TrEMBL
Match: A0A6J1KIQ9 (uncharacterized protein LOC111493605 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493605 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.5e-133
Identity = 244/254 (96.06%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 4   LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVA 63
           LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILK+ASLCLISLIPKCPVA
Sbjct: 3   LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKSASLCLISLIPKCPVA 62

Query: 64  QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT 123
           QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT
Sbjct: 63  QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT 122

Query: 124 KTFAARFGSPDGSEVLSVVTRPTNQLKITFLE---------AKDITDIGSLREAAKIFVP 183
           KTFAARFGSPDGSEVLSVVTRPTNQLKITFLE         AKDITDIGSLREAAKIFVP
Sbjct: 123 KTFAARFGSPDGSEVLSVVTRPTNQLKITFLEELPFSCEKQAKDITDIGSLREAAKIFVP 182

Query: 184 GGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDED 243
           GGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDED
Sbjct: 183 GGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDED 242

Query: 244 GIKLRSAAISLTVL 249
           GIKLRSAAISLTVL
Sbjct: 243 GIKLRSAAISLTVL 256

[Close]

BLAST of CmoCh05G011710 vs. ExPASy TrEMBL
Match: A0A0A0LJH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020900 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.2e-120
Identity = 220/249 (88.35%), Postives = 232/249 (93.17%), Query Frame = 0


Query: 1   MALLLSLCL-HPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPK 60
           MA+ LSLC+ HPPN  QNPT+ VP PTT+ F  PT+LNS SKRHFILKTASLCLIS IPK
Sbjct: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60

Query: 61  CPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGD 120
           CPV QSS+ SPTSK GLP +ANTKSWFQFYGDGFSIRVPPQFEDLTEPED++AGLSLYGD
Sbjct: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120

Query: 121 KVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATL 180
           K KTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGG+TL
Sbjct: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180

Query: 181 FSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIK+DEGFRTYYFYEFGKNE+HVALVATVNSGQ FVAGATAPLSKWDEDGIKLR
Sbjct: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240

Query: 241 SAAISLTVL 249
           SAAISLTVL
Sbjct: 241 SAAISLTVL 249

[Close]

BLAST of CmoCh05G011710 vs. NCBI nr
Match: XP_022946291.1 (uncharacterized protein LOC111450417 isoform X2 [Cucurbita moschata])

HSP 1 Score: 498.4 bits (1282), Expect = 3.5e-137
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC 60
           MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC
Sbjct: 1   MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC 60

Query: 61  PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK 120
           PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK
Sbjct: 61  PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK 120

Query: 121 VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLF 180
           VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLF
Sbjct: 121 VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLF 180

Query: 181 SARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRS 240
           SARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRS
Sbjct: 181 SARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRS 240

Query: 241 AAISLTVL 249
           AAISLTVL
Sbjct: 241 AAISLTVL 248

[Close]

BLAST of CmoCh05G011710 vs. NCBI nr
Match: XP_023521934.1 (uncharacterized protein LOC111785779 [Cucurbita pepo subsp. pepo] >XP_023521935.1 uncharacterized protein LOC111785779 [Cucurbita pepo subsp. pepo] >XP_023545472.1 uncharacterized protein LOC111804892 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545473.1 uncharacterized protein LOC111804892 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545474.1 uncharacterized protein LOC111804892 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545475.1 uncharacterized protein LOC111804892 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6599268.1 hypothetical protein SDJN03_09046, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 496.9 bits (1278), Expect = 1.0e-136
Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC 60
           MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPT+LNSNSKRHFILKTASLCLISLIPKC
Sbjct: 1   MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTSLNSNSKRHFILKTASLCLISLIPKC 60

Query: 61  PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK 120
           PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK
Sbjct: 61  PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK 120

Query: 121 VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLF 180
           VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLF
Sbjct: 121 VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLF 180

Query: 181 SARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRS 240
           SARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRS
Sbjct: 181 SARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRS 240

Query: 241 AAISLTVL 249
           AAISLTVL
Sbjct: 241 AAISLTVL 248

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BLAST of CmoCh05G011710 vs. NCBI nr
Match: XP_022999130.1 (uncharacterized protein LOC111493605 isoform X2 [Cucurbita maxima] >XP_022999131.1 uncharacterized protein LOC111493605 isoform X2 [Cucurbita maxima])

HSP 1 Score: 492.3 bits (1266), Expect = 2.5e-135
Identity = 244/245 (99.59%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 4   LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVA 63
           LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILK+ASLCLISLIPKCPVA
Sbjct: 3   LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKSASLCLISLIPKCPVA 62

Query: 64  QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT 123
           QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT
Sbjct: 63  QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT 122

Query: 124 KTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSAR 183
           KTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSAR
Sbjct: 123 KTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSAR 182

Query: 184 TFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRSAAI 243
           TFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRSAAI
Sbjct: 183 TFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRSAAI 242

Query: 244 SLTVL 249
           SLTVL
Sbjct: 243 SLTVL 247

[Close]

BLAST of CmoCh05G011710 vs. NCBI nr
Match: XP_022946289.1 (uncharacterized protein LOC111450417 isoform X1 [Cucurbita moschata] >XP_022946290.1 uncharacterized protein LOC111450417 isoform X1 [Cucurbita moschata])

HSP 1 Score: 490.3 bits (1261), Expect = 9.5e-135
Identity = 248/258 (96.12%), Postives = 248/258 (96.12%), Query Frame = 0


Query: 1   MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC 60
           MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC
Sbjct: 1   MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC 60

Query: 61  PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK 120
           PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK
Sbjct: 61  PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK 120

Query: 121 VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE----------AKDITDIGSLREAAK 180
           VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE          AKDITDIGSLREAAK
Sbjct: 121 VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEELFVFSCEKQAKDITDIGSLREAAK 180

Query: 181 IFVPGGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSK 240
           IFVPGGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSK
Sbjct: 181 IFVPGGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSK 240

Query: 241 WDEDGIKLRSAAISLTVL 249
           WDEDGIKLRSAAISLTVL
Sbjct: 241 WDEDGIKLRSAAISLTVL 258

[Close]

BLAST of CmoCh05G011710 vs. NCBI nr
Match: XP_022999127.1 (uncharacterized protein LOC111493605 isoform X1 [Cucurbita maxima] >XP_022999128.1 uncharacterized protein LOC111493605 isoform X1 [Cucurbita maxima] >XP_022999129.1 uncharacterized protein LOC111493605 isoform X1 [Cucurbita maxima])

HSP 1 Score: 484.6 bits (1246), Expect = 5.2e-133
Identity = 244/254 (96.06%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 4   LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVA 63
           LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILK+ASLCLISLIPKCPVA
Sbjct: 3   LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKSASLCLISLIPKCPVA 62

Query: 64  QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT 123
           QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT
Sbjct: 63  QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT 122

Query: 124 KTFAARFGSPDGSEVLSVVTRPTNQLKITFLE---------AKDITDIGSLREAAKIFVP 183
           KTFAARFGSPDGSEVLSVVTRPTNQLKITFLE         AKDITDIGSLREAAKIFVP
Sbjct: 123 KTFAARFGSPDGSEVLSVVTRPTNQLKITFLEELPFSCEKQAKDITDIGSLREAAKIFVP 182

Query: 184 GGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDED 243
           GGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDED
Sbjct: 183 GGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDED 242

Query: 244 GIKLRSAAISLTVL 249
           GIKLRSAAISLTVL
Sbjct: 243 GIKLRSAAISLTVL 256

[Close]

BLAST of CmoCh05G011710 vs. TAIR 10
Match: AT5G27390.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 289.3 bits (739), Expect = 3.0e-78
Identity = 150/254 (59.06%), Postives = 195/254 (76.77%), Query Frame = 0


Query: 1   MALLL-SLCLHPPNLQ-QNPTAAVPHPTTVGFHEPTTLNSNS--KRHFILKTASLCLISL 60
           MA+LL SL LHPPN + QNP            ++P  L+S++  +R  +L+TASLC +S 
Sbjct: 1   MAILLHSLSLHPPNPKPQNP------------YKPKILSSSATFRRDVVLRTASLCFVSF 60

Query: 61  I--PKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGL 120
           I   + P + +  +  T    L G+ANTKSWFQ++G GF+IRVPP FED+ EPED++AGL
Sbjct: 61  IFQNQIPESLADPLKSTKPLRL-GIANTKSWFQYFGSGFAIRVPPDFEDVNEPEDYSAGL 120

Query: 121 SLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVP 180
           SLYGDK K +TFAARF +PDGSEVLSVV RP+NQLKITFLEAKDI+D+GSL+ AA++FVP
Sbjct: 121 SLYGDKAKPQTFAARFQTPDGSEVLSVVIRPSNQLKITFLEAKDISDLGSLKAAARLFVP 180

Query: 181 GGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDED 240
           G AT++SART K+K++EG R YYFYEFG++EE +ALVA+VN G+ ++AGA AP SKW +D
Sbjct: 181 GAATIYSARTIKVKEEEGLRNYYFYEFGRDEERIALVASVNRGKVYIAGAAAPESKWKDD 240

Query: 241 GIKLRSAAISLTVL 249
            +KLRSAAIS T+L
Sbjct: 241 ELKLRSAAISFTIL 241

The following BLAST results are available for this feature:

BLAST of CmoCh05G011710 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh05G011710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G382	1.7e-137	100.00	uncharacterized protein LOC111450417 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KC82	1.2e-135	99.59	uncharacterized protein LOC111493605 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G3F8	4.6e-135	96.12	uncharacterized protein LOC111450417 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KIQ9	2.5e-133	96.06	uncharacterized protein LOC111493605 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0LJH6	3.2e-120	88.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020900 PE=4 SV=1	[more]

BLAST of CmoCh05G011710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946291.1	3.5e-137	100.00	uncharacterized protein LOC111450417 isoform X2 [Cucurbita moschata]	[more]
XP_023521934.1	1.0e-136	99.60	uncharacterized protein LOC111785779 [Cucurbita pepo subsp. pepo] >XP_023521935....	[more]
XP_022999130.1	2.5e-135	99.59	uncharacterized protein LOC111493605 isoform X2 [Cucurbita maxima] >XP_022999131...	[more]
XP_022946289.1	9.5e-135	96.12	uncharacterized protein LOC111450417 isoform X1 [Cucurbita moschata] >XP_0229462...	[more]
XP_022999127.1	5.2e-133	96.06	uncharacterized protein LOC111493605 isoform X1 [Cucurbita maxima] >XP_022999128...	[more]

BLAST of CmoCh05G011710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27390.1	3.0e-78	59.06	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 76..247 e-value: 1.9E-14 score: 55.8
None	No IPR available	PANTHER	PTHR37764	KETOSE/ALDOSE ISOMERASE, PUTATIVE (MOG1/PSBP/DUF1795-LIKE PHOTOSYSTEM II REACTION CENTER PSBP FAMILY PROTEIN)-RELATED	coord: 2..248
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 84..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G011710.1	CmoCh05G011710.1	mRNA