CmoCh05G011370 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G011370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Cmo_Chr05: 9050966 .. 9055990 (+)
RNA-Seq Expression	CmoCh05G011370
Synteny	CmoCh05G011370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGTCTCTGAAAACTCGAGAAGAAGCTAAAATCCTAGAAAATGGCCACCGGGATGAAGCTCCCCATGGCTGTTAGCTTGCAGAAACCCATGGCTATGGCGGTTCCATCTTCCTCATCACGTCTCCCTAGAGGGATCAATTTCAGGACTTGTTGCAGCATGAACGCTACAAGCAAAGCGAAAATCCCTTTACCTCCGATAAACCCAAAGGATCCATTTCTTTCGAAGCTCGCTTCAGTAGCTTCAACCTCACCTGAAACGTTGCTAAGCCGCCCTGGAAATTCCGATTCTCTTCCATATTTGGATATTTTTGATTCTCCTCAGCTCATGGCTGCGCCTGCCCAAGTAAGTAAGCTGTCCCTTGCTTAATTTCATATGCGTTTTTTGTTCTTGCTGGTGTTTATATGATTTTCTGTTTGGAAACGGAGTTTTATTTAAATTAAGCTTTGTTTTGTAGCTAATGTTGTGAATTTGGTGATTTTCTTATTGGATAAGGTCGAAAGATCAGTTTCCTACAACGAGCATAGGTCGAGGAGGCCTCCGCCTGACTTGCCGTCTCTGTTACTTCATGGAAGAATTGTTTACATCGGAATGCCTGTAAGTGATTGAATTAGTGTTACTGCTGTGCTATACGTTTTAACTTGTTTTTTCGAGGAACTATTCAACTAATATTAAGGGGGAATTTACCACGATTTTTTCAATATCTTATAGTCGAGTAGTTACATTGAATGAAAAAAATGAAGCATGTTCTTTAAAATTGTATAAAATTTAAACGTTTTAACTAATGCACGCTGTAAAGGTGCCTCTCATAATTGCATATCGTATATCTTTAGAGGCCTACAGAGTGTAGGAAATTGTAGTTCAAGAATGAGTGATGTTAAGTTTTTTTCACGAACCTTGTTGATTGAACTGAAAGTGTTAATTAAGTTGTGTTGGGGTACTTTGGTATCGTGATCCTATTAAAACAGATTTTATGACCTCATTCAGCTACTGATTTTGAAGCTTAGCAAATTTTTTTTTCAAGTGCTCTATACACTGTAGAATGATTTTCGTTTCTTTCCTCTCGAGTTGCATAAGCCCCTATGAAATAGCCATTCACAATATAAGTGTAACATGGTTTTTTTTCTAAGGCATAATTGATTCTAAATGGTTTAAAACTATTGTGTCAACGTTCTGAGCAGTTTTTAACTGTCTTTTAAAAGAAGCTTTCAGCTACTTGTGTAGAGAATACCATAGTATCTGATCCCTCTTCATTCAATCATTTCTACTCTCAGTTGGTTCCAGCTGTCACGGAGCTAGTTATTGCTCAACTGATGTACTTGCAATGGATGGATCCAAAAGAACCAATATATATTTATATAAACTCCTCAGGAACAACTCGTGATGATGGTGAAACTGTAAGCTTTGAAATTATTCAGCTACATGAAACGAGTCAAATTCAGCTGTTAAAAGCATGCATATCTTCTTCTTGCTTTATAAAATCTTCTGCCTGCCGTTAGAAATTTCAGGGTATTACCTTGACATCAAAGAAGATTTCGATCCGATGCTTTATTTTTGTCCTAGTTGATTCTGATTTGACACTAGAAGTATGTTCTTTTTTTTTTCCCAATATCCAAATAATTGTCTGTAGATACGAATATTTGATATGATTCCATCATTAAATTTTCTTCCCTATCAACTTAAGTTTTTGGGTTCTGTGGTAACTTAACATAGTATGAGAGGTGGAAGTCTCTCGTTCAAATCCCTATATTGTCATTTCCTCCCCATCTCATTTTGATTTCTGCTTGTTGGGTCTTTTAAAAAATTTTCAGGTCCACAAGTGAGGGAAGTATTAAAGCATTCATTTTGTTCTCAATCCAAAATCAAGAAAAACAATCTTTTAAACTTTATATTATTCCTCTCTCCAAATGAGATTGTAGCGCTCTTCTTTAGCTTGGCCAAAAGTTTGCTTGCTTGATTGGAGCCATATTTTGTAGCTTGGCTCCTTTTGGGCTGGTTTTTTTGAATTCCCTTTATAATCTTTCATTTTTTTTTTTTTTTTTTTGTCAATGACGGCTCAATCTTTATATGAAAACAATAAAAAATGTGATTGTAGTTTCTAGATTTTGCATTTCCAAAAATATGTTTAATTGTAATTCTTAGGATAGCTTCTTGATCCTAAATATGTGTAATTGGGCGTGGGTTAGTATTCCGAGAACAGTAATACCTGAATCAGGTAGTTTACTTCAATTAGTACCTAACACAAAAATTACTGTAATAATAAAAAAAAGAAAGGTTCATCGACCTCAGTAGATCAATGGTAGAACAATTTTTTCTTCCTGACAAAGTACTCTCCATCAACAATAGCATGGAGATGGAACTGTGTCTTTCGCAAGCTCTGCTGATGATGTTACAGAGGTGATGAGTCTTTCACAATGTTATGAGATCTGTTCATGAAAAGATATAGATTTTTCACGACATTATCCGAGTATGGAACAGAGAGGGTATGGTTTCCACTTGCTAGCCCACTATTTAAATTTAGGAAAGTGGGTTTGTACAAATACGGATGGTTTAGATGAATATTGCAAAATATGGTAATGGAGGGATGATGGGTCTTTCTGTTTCACGAGCTAGCTTATTAATTTGATTGTGGAAATGGGTTTTATGATGCTGCATTATATCTTGTTCGGTTTGGAATGGCATTTATTCGTTTGTCATCCTTTTGTCAACATATTAAATTATTTGGCATTCAGGTCGCGATGGAGACAGAGGGTTTTGCTATCTATGATGCTATGATGCAGTTAAAAAACGAGGTGTGTTTTCTTGTGAAACCATTCCGTTCATTCCTACTATTCTTTTGCTGGCAAGATGACAACTAGATGCATTGTGGAGTCCGGAATTACTGGTTAATCTCATTGATTGGTATCTTAGTGTAAGTTATCACTGCACCTAGGGTATGGACTCTCTGGTCATGTCCACATATGGTAGGCACTTAAAATTTCTAGTGTTGTAGGTGCAACAACTGGCCTGAGAAATGACATGCTGATTGACCTCTTTTGCTCCAGACTAATAATTTTAATTTTGTAAAAAAGATTGAAAGAAAATATTTCTGTAATGTAGGTAGTGTCCTTGGAAATAATTATGCTTTTGTTGTTTGAATCTCTTGCTGGTTTTGTGAAAATTTTATCATCTTTCCATTTGTAAAACATGATACCAAATATCTCATACAGATACACACATTGACTGTCGGAGCTGCCATAGGTCAAGCTTGTCTATTGCTTGCTGCAGGAACTAAAGGCAGACGTTTTATGATGCCACATTCCAAAGGTTTGATGCTTTTGGCACGTTACTTTCTGTTTTTGAATTGGTAACTATACTTTCTCGTATAGAATAATCAAATTTTCCCTCGAATTCATTCCAGCCATGATACAGCAGCCTCGTGTCCCTTCATCTGGTTTGATGCCTGCTAGTGACGTTCTGATTCGCGCAAAAGAGGTCCAGATCCTTCTATTGCTTGATAATTTATTTGAAGTAGAACTCAGTTTCTATGACACTGATTTTTGATGGAGCTCTTAGCACTTCGATTCAAGTATTCGAAAAGGAACTATTCAAAGTCTCAATCAAGTAACCACAGTTATTTATTTTATTTTTTTGCAATGACGATTTGCACATCGTCATATATCGAGTGAATTGGAATTAACTGGTAGATTTGTATCTTATTCCCAAAAAGTTTCAAGGGAATTTCCCCCTTACAAGGATATAAGTTGAGCTGTGTATTTCATCTCGTCTTTCAGGTGATAACAAACAGGGACACACTAGTGGAACTCCTAGCAAAGCACACTGGAAATGTAAGCCTAGACAACATTTGTTTCTACTTTTTTCTATGAACTCCAGACACGACATTCCATATAATTCCTTATACAATCTTAATATTGTCAGTCACTAGAGACAGTAGCTAATGCGATGAAAAGACCATTCTACATGGACGCAATAAAAGCAAAAGAATTTGGAGTTATCGACAAGGTAAATTAACGCACAGATTTTTTTTTTTTGGGTTGTAACACGATGCGCTTGCCTCGTTGCTTATGCCTGTAGATTATAAATCTAAGTTGGCAATATGTCTCCAGATTCTTTGGCGAGGTCAGGAGAAGATTATGGCTGAAGTGGCTTCCCCGGAGGATTGGGACAAAGGAGCTGGCATCAAAGCTGTTGATGAACTCTAAATCCCCTCTCAGATCTACTCTTCATTCATAGCAAGTAAGCCTATTGTTTCTCCTTTTTGCAAACTCAAATGCCTTGTTCTTTTTTTCAGTATTCAACGTGCAGATGTGTTGTAAAGCCAATAGAATTTAATCATTCCTTTTGAAAGCATGGTTTCATTGGAATTGAAATTTGTGGTAGAATGAGAAGCATAATTTTGTTTGTACAAGGTGTCTCCCATCTCCCTCGGGCATAGATGCGTAATATCATTTAGTTCTTAAAGTGAGGAAATATTTGCTTAGCTCAGTTGAAATCTTTAACAATAATACCATCCCAATTATGTAAAATATGAAGCCTCCTGCAAGTTTTTTGACCCAAGGGTTCTCTTATTTTCTCTTATGGATGATAGAGACGATATTGATGATAGTGATATTGATGATAGTGGCGATACTGATGATAGCGACGATATCGAACGTGGCCGTGAAATGGAGCTGGAGTTTCTAACTATGACGAATGTGTCACTAACTATGGATAGTCTGCTGGAAACAGACTGATTTTATATCATCCTTCGATTCAGGTAAGCTAAAGCAATGTCTCTGGCACAATATTGATTTCAAATATACGGTGGAAATTATGGAGACATGTATTTAGACAGTTTTCTAGGTGTTAAATTAGAATTTCTCATTTTCTCTAAAGCGTTAAAAAAATTCCTATTTAACTTTCGAAGTGATACAAAAAGAAAAAAGAAAAAGGAATAAAGATATGATCAAACTTTTCTTTAGATGCAACAACAAACCATCTTTTAATGCATTTCTCCATTGGTAATATTGATTAAGATTGGACATAG

mRNA sequence

CACGTCTCTGAAAACTCGAGAAGAAGCTAAAATCCTAGAAAATGGCCACCGGGATGAAGCTCCCCATGGCTGTTAGCTTGCAGAAACCCATGGCTATGGCGGTTCCATCTTCCTCATCACGTCTCCCTAGAGGGATCAATTTCAGGACTTGTTGCAGCATGAACGCTACAAGCAAAGCGAAAATCCCTTTACCTCCGATAAACCCAAAGGATCCATTTCTTTCGAAGCTCGCTTCAGTAGCTTCAACCTCACCTGAAACGTTGCTAAGCCGCCCTGGAAATTCCGATTCTCTTCCATATTTGGATATTTTTGATTCTCCTCAGCTCATGGCTGCGCCTGCCCAAGTCGAAAGATCAGTTTCCTACAACGAGCATAGGTCGAGGAGGCCTCCGCCTGACTTGCCGTCTCTGTTACTTCATGGAAGAATTGTTTACATCGGAATGCCTTTGGTTCCAGCTGTCACGGAGCTAGTTATTGCTCAACTGATGTACTTGCAATGGATGGATCCAAAAGAACCAATATATATTTATATAAACTCCTCAGGAACAACTCGTGATGATGGTGAAACTGTCGCGATGGAGACAGAGGGTTTTGCTATCTATGATGCTATGATGCAGTTAAAAAACGAGATACACACATTGACTGTCGGAGCTGCCATAGGTCAAGCTTGTCTATTGCTTGCTGCAGGAACTAAAGGCAGACGTTTTATGATGCCACATTCCAAAGCCATGATACAGCAGCCTCGTGTCCCTTCATCTGGTTTGATGCCTGCTAGTGACGTTCTGATTCGCGCAAAAGAGGTGATAACAAACAGGGACACACTAGTGGAACTCCTAGCAAAGCACACTGGAAATTCACTAGAGACAGTAGCTAATGCGATGAAAAGACCATTCTACATGGACGCAATAAAAGCAAAAGAATTTGGAGTTATCGACAAGATTCTTTGGCGAGGTCAGGAGAAGATTATGGCTGAAGTGGCTTCCCCGGAGGATTGGGACAAAGGAGCTGGCATCAAAGCTGTTGATGAACTCTAAATCCCCTCTCAGATCTACTCTTCATTCATAGCAAAGACGATATTGATGATAGTGATATTGATGATAGTGGCGATACTGATGATAGCGACGATATCGAACGTGGCCGTGAAATGGAGCTGGAGTTTCTAACTATGACGAATGTGTCACTAACTATGGATAGTCTGCTGGAAACAGACTGATTTTATATCATCCTTCGATTCAGGTAAGCTAAAGCAATGTCTCTGGCACAATATTGATTTCAAATATACGGTGGAAATTATGGAGACATGTATTTAGACAGTTTTCTAGGTGTTAAATTAGAATTTCTCATTTTCTCTAAAGCGTTAAAAAAATTCCTATTTAACTTTCGAAGTGATACAAAAAGAAAAAAGAAAAAGGAATAAAGATATGATCAAACTTTTCTTTAGATGCAACAACAAACCATCTTTTAATGCATTTCTCCATTGGTAATATTGATTAAGATTGGACATAG

Coding sequence (CDS)

ATGGCCACCGGGATGAAGCTCCCCATGGCTGTTAGCTTGCAGAAACCCATGGCTATGGCGGTTCCATCTTCCTCATCACGTCTCCCTAGAGGGATCAATTTCAGGACTTGTTGCAGCATGAACGCTACAAGCAAAGCGAAAATCCCTTTACCTCCGATAAACCCAAAGGATCCATTTCTTTCGAAGCTCGCTTCAGTAGCTTCAACCTCACCTGAAACGTTGCTAAGCCGCCCTGGAAATTCCGATTCTCTTCCATATTTGGATATTTTTGATTCTCCTCAGCTCATGGCTGCGCCTGCCCAAGTCGAAAGATCAGTTTCCTACAACGAGCATAGGTCGAGGAGGCCTCCGCCTGACTTGCCGTCTCTGTTACTTCATGGAAGAATTGTTTACATCGGAATGCCTTTGGTTCCAGCTGTCACGGAGCTAGTTATTGCTCAACTGATGTACTTGCAATGGATGGATCCAAAAGAACCAATATATATTTATATAAACTCCTCAGGAACAACTCGTGATGATGGTGAAACTGTCGCGATGGAGACAGAGGGTTTTGCTATCTATGATGCTATGATGCAGTTAAAAAACGAGATACACACATTGACTGTCGGAGCTGCCATAGGTCAAGCTTGTCTATTGCTTGCTGCAGGAACTAAAGGCAGACGTTTTATGATGCCACATTCCAAAGCCATGATACAGCAGCCTCGTGTCCCTTCATCTGGTTTGATGCCTGCTAGTGACGTTCTGATTCGCGCAAAAGAGGTGATAACAAACAGGGACACACTAGTGGAACTCCTAGCAAAGCACACTGGAAATTCACTAGAGACAGTAGCTAATGCGATGAAAAGACCATTCTACATGGACGCAATAAAAGCAAAAGAATTTGGAGTTATCGACAAGATTCTTTGGCGAGGTCAGGAGAAGATTATGGCTGAAGTGGCTTCCCCGGAGGATTGGGACAAAGGAGCTGGCATCAAAGCTGTTGATGAACTCTAA

Protein sequence

MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAMETEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKAVDEL

Homology

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BLAST of CmoCh05G011370 vs. ExPASy Swiss-Prot
Match: Q8L770 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 7.7e-135
Identity = 246/329 (74.77%), Postives = 281/329 (85.41%), Query Frame = 0


Query: 9   MAVSLQKPMAMAVPSSSSRLPR---------GINFRTC-CSMNATSKAKIPLPPINPKDP 68
           MA  LQ  M   +P SSS  P            N +T   +  A + AKIP+PPINPKDP
Sbjct: 1   MASCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPPINPKDP 60

Query: 69  FLSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPP 128
           FLS LAS+A+ SPE LL+RP N+D  PYLDIFDSPQLM++PAQVERSV+YNEHR R PPP
Sbjct: 61  FLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPP 120

Query: 129 DLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVA 188
           DLPS+LL GRIVYIGMPLVPAVTELV+A+LMYLQW+DPKEPIYIYINS+GTTRDDGETV 
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180

Query: 189 METEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPS 248
           ME+EGFAIYD++MQLKNE+HT+ VGAAIGQACLLL+AGTKG+RFMMPH+KAMIQQPRVPS
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 240

Query: 249 SGLMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVID 308
           SGLMPASDVLIRAKEVITNRD LVELL+KHTGNS+ETVAN M+RP+YMDA KAKEFGVID
Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300

Query: 309 KILWRGQEKIMAEVASPEDWDKGAGIKAV 328
           +ILWRGQEKI+A+V   E++DK AGIK+V
Sbjct: 301 RILWRGQEKIIADVVPSEEFDKNAGIKSV 329

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BLAST of CmoCh05G011370 vs. ExPASy Swiss-Prot
Match: P74466 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpR PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.3e-45
Identity = 95/208 (45.67%), Postives = 140/208 (67.31%), Query Frame = 0


Query: 104 RSVSYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVIAQLMYLQW 163
           +S  Y +   + PPPDL SLLL  RIVY+GMPL  +          VT+L+IAQL+YLQ+
Sbjct: 7   QSSYYGDMAFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQF 66

Query: 164 MDPKEPIYIYINSSGTTRDDGETVAMETEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLL 223
            DP +PIY YINS+GT+   G+ V  ETE FAI D +  +K  +HT+ +G A+G A ++L
Sbjct: 67  DDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMIL 126

Query: 224 AAGTKGRRFMMPHSKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDTLVELLAKHTGNSL 283
           ++GTKG R  +PH+  ++ Q R  + G   A+D+ IRAKEVI+N+ T++E+L+ +TG + 
Sbjct: 127 SSGTKGYRASLPHATIVLNQNRTGAQG--QATDIQIRAKEVISNKQTMLEILSLNTGQTQ 186

Query: 284 ETVANAMKRPFYMDAIKAKEFGVIDKIL 302
           E +A  M R FY+   +AKE+G+ID++L
Sbjct: 187 EKLAKDMDRTFYLTPAQAKEYGLIDRVL 212

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BLAST of CmoCh05G011370 vs. ExPASy Swiss-Prot
Match: Q9L4P4 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpR PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.8e-44
Identity = 93/216 (43.06%), Postives = 138/216 (63.89%), Query Frame = 0


Query: 96  MAAPAQVERSVSYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVI 155
           M    Q  ++  Y +   R PPPDLPSLLL  RI+Y+GMPL  +          VTEL+I
Sbjct: 1   MLESIQAVQAPYYGDVSYRTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELII 60

Query: 156 AQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAMETEGFAIYDAMMQLKNEIHTLTVGAA 215
           AQL+YL++ +P++PIY YINS+GT+   G+ +  ETE FAI D M  +K  +HT+ +G A
Sbjct: 61  AQLLYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQA 120

Query: 216 IGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDTLVELL 275
           +G A ++L+ GT G R  +PH+  ++ QPR  + G   ASD+ IRAKEV+ N+ T++E+ 
Sbjct: 121 MGTAAMILSGGTPGNRASLPHATIVLNQPRTGAQG--QASDIQIRAKEVLANKRTMLEIF 180

Query: 276 AKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKIL 302
           A++TG   + +A    R  YM   +A E+G+ID++L
Sbjct: 181 ARNTGQDPDRLARDTDRMLYMTPAQAVEYGLIDRVL 214

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BLAST of CmoCh05G011370 vs. ExPASy Swiss-Prot
Match: Q9XJ35 (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR1 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.9e-43
Identity = 94/190 (49.47%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 112 RSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTR 171
           R R  PPDLPSLLL  RI Y+GMP+VPAVTEL++AQ M+L + +P +PIY+YINS GT  
Sbjct: 164 RPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQN 223

Query: 172 DDGETVAMETEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMI 231
           +  ETV  ETE +AI D +   K++++T+  G A GQA +LL+ G KG R + PHS   +
Sbjct: 224 EKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKL 283

Query: 232 QQPRV-PSSGLMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIK 291
             P+V  SSG   A D+ I+AKE+  N +  +ELLAK TG S E +   +KRP Y+ A  
Sbjct: 284 YLPKVNRSSG--AAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQA 343

Query: 292 AKEFGVIDKI 301
           A ++G+ DKI
Sbjct: 344 AIDYGIADKI 351

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BLAST of CmoCh05G011370 vs. ExPASy Swiss-Prot
Match: Q8LB10 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.6e-42
Identity = 93/188 (49.47%), Postives = 126/188 (67.02%), Query Frame = 0


Query: 115 RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDG 174
           +PPPDL S L   RIVY+GM LVP+VTEL++A+ +YLQ+ D ++PIY+YINS+GTT+ +G
Sbjct: 101 QPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-NG 160

Query: 175 ETVAMETEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQP 234
           E +  +TE FAIYD M  +K  I TL VG A G+A LLL AG KG R  +P S  MI+QP
Sbjct: 161 EKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQP 220

Query: 235 RVPSSGLMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEF 294
                G   A+DV I  KE+   +  +V+L +KH G S E +   MKRP Y    +A E+
Sbjct: 221 IARFQG--QATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEY 280

Query: 295 GVIDKILW 303
           G+IDK+++
Sbjct: 281 GIIDKVVY 285

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BLAST of CmoCh05G011370 vs. ExPASy TrEMBL
Match: A0A6J1G379 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111450387 PE=3 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 2.3e-182
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL
Sbjct: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL
Sbjct: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180
           PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME
Sbjct: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180

Query: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240
           TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG
Sbjct: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240

Query: 241 LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 300
           LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI
Sbjct: 241 LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 300

Query: 301 LWRGQEKIMAEVASPEDWDKGAGIKAVDEL 331
           LWRGQEKIMAEVASPEDWDKGAGIKAVDEL
Sbjct: 301 LWRGQEKIMAEVASPEDWDKGAGIKAVDEL 330

[Close]

BLAST of CmoCh05G011370 vs. ExPASy TrEMBL
Match: A0A6J1KFX9 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111493541 PE=3 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 2.4e-179
Identity = 324/330 (98.18%), Postives = 328/330 (99.39%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPMAVSLQKPMAMAVPSSSSRLPR INF TCCSM+ATSKAKIPLPPINPKDPFL
Sbjct: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRRINFSTCCSMSATSKAKIPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           +KLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL
Sbjct: 61  AKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180
           PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME
Sbjct: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180

Query: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240
           TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG
Sbjct: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240

Query: 241 LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 300
           LMPASD+LIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAK+FGVIDKI
Sbjct: 241 LMPASDILIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKQFGVIDKI 300

Query: 301 LWRGQEKIMAEVASPEDWDKGAGIKAVDEL 331
           LWRGQEKIMAEVASPEDWDKGAGIKAVDEL
Sbjct: 301 LWRGQEKIMAEVASPEDWDKGAGIKAVDEL 330

[Close]

BLAST of CmoCh05G011370 vs. ExPASy TrEMBL
Match: A0A6J1D9I5 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111018868 PE=3 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.2e-162
Identity = 291/329 (88.45%), Postives = 312/329 (94.83%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPMA+SLQKPMAMA  SSSS L RG NFRT C  NATSKAKIPLPPINPKDPFL
Sbjct: 1   MATGMKLPMAISLQKPMAMASQSSSSSLARGTNFRTVCCTNATSKAKIPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           SKLASVASTSPETLL+RP NSDS PYLD+FD+PQLMAAPAQVERSVSYNEHR RRPPPDL
Sbjct: 61  SKLASVASTSPETLLNRPSNSDSPPYLDLFDAPQLMAAPAQVERSVSYNEHRPRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180
           PSLLL+GRIVYIGMPLVPAVTELVIA+LMYLQWMDPKEPIY+YINS+GTTRDDGETV ME
Sbjct: 121 PSLLLNGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGETVGME 180

Query: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240
           TEGFAIYDAMMQLKNEIHT+ VGAAIGQACLLLAAG++G+RFMMPH+KAMIQQPRVPSSG
Sbjct: 181 TEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSQGKRFMMPHAKAMIQQPRVPSSG 240

Query: 241 LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 300
           LMPASDVLIRAKEVITNRDTLV+LLAKHTGNSLETV+N M+RPFYMD+ +AKEFGVIDKI
Sbjct: 241 LMPASDVLIRAKEVITNRDTLVKLLAKHTGNSLETVSNVMRRPFYMDSTRAKEFGVIDKI 300

Query: 301 LWRGQEKIMAEVASPEDWDKGAGIKAVDE 330
           LWRGQEKIMA+VA+PE+WDKGAGIK  DE
Sbjct: 301 LWRGQEKIMADVAAPEEWDKGAGIKVADE 329

[Close]

BLAST of CmoCh05G011370 vs. ExPASy TrEMBL
Match: A0A1S3BXZ3 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103494643 PE=3 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.2e-159
Identity = 288/331 (87.01%), Postives = 310/331 (93.66%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAV--PSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDP 60
           MA GMKLPMAV+LQKPMAMA+  PSSSS L R INFRT    NATSKAKIP+PPINPKDP
Sbjct: 1   MAIGMKLPMAVTLQKPMAMAMAAPSSSSSLHRAINFRTVSCSNATSKAKIPMPPINPKDP 60

Query: 61  FLSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPP 120
           FLSKLASVASTSPETLL+RP NSDS PYLDIFD+P+LMAAPAQVERSVSYNEHR RRPPP
Sbjct: 61  FLSKLASVASTSPETLLNRPENSDSPPYLDIFDAPRLMAAPAQVERSVSYNEHRPRRPPP 120

Query: 121 DLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVA 180
           DLPSLLLHGRIVYIGMPLVPAVTEL++A+LMYLQWMDPKEPIYIYINS+GTTRDDGET+ 
Sbjct: 121 DLPSLLLHGRIVYIGMPLVPAVTELIVAELMYLQWMDPKEPIYIYINSTGTTRDDGETIG 180

Query: 181 METEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPS 240
           METEGFAIYDAMMQLKNEIHT+ VGAAIGQACLLLAAG++GRR+MMPH+KAMIQQPRVPS
Sbjct: 181 METEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSEGRRYMMPHAKAMIQQPRVPS 240

Query: 241 SGLMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVID 300
           SGLMPASDVLIRAKEVITNRDTLV+LLAKHTGNS+ETV+N MKRPFYMDA  AKEFGV+D
Sbjct: 241 SGLMPASDVLIRAKEVITNRDTLVKLLAKHTGNSVETVSNVMKRPFYMDATLAKEFGVVD 300

Query: 301 KILWRGQEKIMAEVASPEDWDKGAGIKAVDE 330
           KILWRGQEKIM+ V +PEDWDKGAGIK VDE
Sbjct: 301 KILWRGQEKIMSAVVAPEDWDKGAGIKVVDE 331

[Close]

BLAST of CmoCh05G011370 vs. ExPASy TrEMBL
Match: A0A5A7U3K5 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00970 PE=3 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.2e-159
Identity = 288/331 (87.01%), Postives = 310/331 (93.66%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAV--PSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDP 60
           MA GMKLPMAV+LQKPMAMA+  PSSSS L R INFRT    NATSKAKIP+PPINPKDP
Sbjct: 1   MAIGMKLPMAVTLQKPMAMAMAAPSSSSSLHRAINFRTVSCSNATSKAKIPMPPINPKDP 60

Query: 61  FLSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPP 120
           FLSKLASVASTSPETLL+RP NSDS PYLDIFD+P+LMAAPAQVERSVSYNEHR RRPPP
Sbjct: 61  FLSKLASVASTSPETLLNRPENSDSPPYLDIFDAPRLMAAPAQVERSVSYNEHRPRRPPP 120

Query: 121 DLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVA 180
           DLPSLLLHGRIVYIGMPLVPAVTEL++A+LMYLQWMDPKEPIYIYINS+GTTRDDGET+ 
Sbjct: 121 DLPSLLLHGRIVYIGMPLVPAVTELIVAELMYLQWMDPKEPIYIYINSTGTTRDDGETIG 180

Query: 181 METEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPS 240
           METEGFAIYDAMMQLKNEIHT+ VGAAIGQACLLLAAG++GRR+MMPH+KAMIQQPRVPS
Sbjct: 181 METEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSEGRRYMMPHAKAMIQQPRVPS 240

Query: 241 SGLMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVID 300
           SGLMPASDVLIRAKEVITNRDTLV+LLAKHTGNS+ETV+N MKRPFYMDA  AKEFGV+D
Sbjct: 241 SGLMPASDVLIRAKEVITNRDTLVKLLAKHTGNSVETVSNVMKRPFYMDATLAKEFGVVD 300

Query: 301 KILWRGQEKIMAEVASPEDWDKGAGIKAVDE 330
           KILWRGQEKIM+ V +PEDWDKGAGIK VDE
Sbjct: 301 KILWRGQEKIMSAVVAPEDWDKGAGIKVVDE 331

[Close]

BLAST of CmoCh05G011370 vs. NCBI nr
Match: XP_022946246.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita moschata] >XP_022946247.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita moschata])

HSP 1 Score: 647.9 bits (1670), Expect = 4.7e-182
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL
Sbjct: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL
Sbjct: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180
           PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME
Sbjct: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180

Query: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240
           TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG
Sbjct: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240

Query: 241 LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 300
           LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI
Sbjct: 241 LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 300

Query: 301 LWRGQEKIMAEVASPEDWDKGAGIKAVDEL 331
           LWRGQEKIMAEVASPEDWDKGAGIKAVDEL
Sbjct: 301 LWRGQEKIMAEVASPEDWDKGAGIKAVDEL 330

[Close]

BLAST of CmoCh05G011370 vs. NCBI nr
Match: XP_023545293.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023545294.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023545295.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 646.4 bits (1666), Expect = 1.4e-181
Identity = 328/330 (99.39%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL
Sbjct: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL
Sbjct: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180
           PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME
Sbjct: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180

Query: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240
           TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKG+RFMMPHSKAMIQQPRVPSSG
Sbjct: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSG 240

Query: 241 LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 300
           LMPASD+LIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI
Sbjct: 241 LMPASDILIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 300

Query: 301 LWRGQEKIMAEVASPEDWDKGAGIKAVDEL 331
           LWRGQEKIMAEVASPEDWDKGAGIKAVDEL
Sbjct: 301 LWRGQEKIMAEVASPEDWDKGAGIKAVDEL 330

[Close]

BLAST of CmoCh05G011370 vs. NCBI nr
Match: XP_022999027.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like [Cucurbita maxima] >XP_022999028.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like [Cucurbita maxima] >XP_022999029.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like [Cucurbita maxima] >XP_022999030.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 637.9 bits (1644), Expect = 4.9e-179
Identity = 324/330 (98.18%), Postives = 328/330 (99.39%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPMAVSLQKPMAMAVPSSSSRLPR INF TCCSM+ATSKAKIPLPPINPKDPFL
Sbjct: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRRINFSTCCSMSATSKAKIPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           +KLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL
Sbjct: 61  AKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180
           PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME
Sbjct: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180

Query: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240
           TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG
Sbjct: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240

Query: 241 LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 300
           LMPASD+LIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAK+FGVIDKI
Sbjct: 241 LMPASDILIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKQFGVIDKI 300

Query: 301 LWRGQEKIMAEVASPEDWDKGAGIKAVDEL 331
           LWRGQEKIMAEVASPEDWDKGAGIKAVDEL
Sbjct: 301 LWRGQEKIMAEVASPEDWDKGAGIKAVDEL 330

[Close]

BLAST of CmoCh05G011370 vs. NCBI nr
Match: KAG6599231.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 593.2 bits (1528), Expect = 1.4e-165
Identity = 302/303 (99.67%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL
Sbjct: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL
Sbjct: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180
           PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME
Sbjct: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180

Query: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240
           TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKG+RFMMPHSKAMIQQPRVPSSG
Sbjct: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSG 240

Query: 241 LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 300
           LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI
Sbjct: 241 LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 300

Query: 301 LWR 304
           LWR
Sbjct: 301 LWR 303

[Close]

BLAST of CmoCh05G011370 vs. NCBI nr
Match: XP_038890491.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Benincasa hispida] >XP_038890492.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 588.6 bits (1516), Expect = 3.4e-164
Identity = 295/329 (89.67%), Postives = 313/329 (95.14%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPMAV+LQKPMAMA PSSSS LPRGINFRT    N TSKAKIPLPPINPKDPFL
Sbjct: 1   MATGMKLPMAVTLQKPMAMAAPSSSSSLPRGINFRTISCTNGTSKAKIPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           SKLASVASTSPETLL+RP NSDS PYLDIFD+PQLMAAPAQVERSVSYNEHR RRPPPDL
Sbjct: 61  SKLASVASTSPETLLNRPKNSDSPPYLDIFDAPQLMAAPAQVERSVSYNEHRPRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180
           PSLLLHGRIVYIGMPLVPAVTELVIA+LMYLQWMDPKEPIY+YINS+GTTRDDGETV ME
Sbjct: 121 PSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGETVGME 180

Query: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240
           TEGFAIYDAMMQLKNEIHT+ VGAAIGQACLLLAAG++G+RFMMPH+KAMIQQPRVPSSG
Sbjct: 181 TEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSG 240

Query: 241 LMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 300
           LMPASDVLIRAKEVITNRDTLV+LLAKHTGN +ETV+N M+RPFYMDA KAKEFGVIDKI
Sbjct: 241 LMPASDVLIRAKEVITNRDTLVKLLAKHTGNPIETVSNVMQRPFYMDATKAKEFGVIDKI 300

Query: 301 LWRGQEKIMAEVASPEDWDKGAGIKAVDE 330
           LWRGQEKIMA+VA+PE+WDKGAGIK VDE
Sbjct: 301 LWRGQEKIMADVAAPEEWDKGAGIKVVDE 329

[Close]

BLAST of CmoCh05G011370 vs. TAIR 10
Match: AT1G09130.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 481.5 bits (1238), Expect = 5.5e-136
Identity = 246/329 (74.77%), Postives = 281/329 (85.41%), Query Frame = 0


Query: 9   MAVSLQKPMAMAVPSSSSRLPR---------GINFRTC-CSMNATSKAKIPLPPINPKDP 68
           MA  LQ  M   +P SSS  P            N +T   +  A + AKIP+PPINPKDP
Sbjct: 1   MASCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPPINPKDP 60

Query: 69  FLSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPP 128
           FLS LAS+A+ SPE LL+RP N+D  PYLDIFDSPQLM++PAQVERSV+YNEHR R PPP
Sbjct: 61  FLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPP 120

Query: 129 DLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVA 188
           DLPS+LL GRIVYIGMPLVPAVTELV+A+LMYLQW+DPKEPIYIYINS+GTTRDDGETV 
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180

Query: 189 METEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPS 248
           ME+EGFAIYD++MQLKNE+HT+ VGAAIGQACLLL+AGTKG+RFMMPH+KAMIQQPRVPS
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 240

Query: 249 SGLMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVID 308
           SGLMPASDVLIRAKEVITNRD LVELL+KHTGNS+ETVAN M+RP+YMDA KAKEFGVID
Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300

Query: 309 KILWRGQEKIMAEVASPEDWDKGAGIKAV 328
           +ILWRGQEKI+A+V   E++DK AGIK+V
Sbjct: 301 RILWRGQEKIIADVVPSEEFDKNAGIKSV 329

[Close]

BLAST of CmoCh05G011370 vs. TAIR 10
Match: AT1G09130.2 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 481.5 bits (1238), Expect = 5.5e-136
Identity = 246/329 (74.77%), Postives = 281/329 (85.41%), Query Frame = 0


Query: 9   MAVSLQKPMAMAVPSSSSRLPR---------GINFRTC-CSMNATSKAKIPLPPINPKDP 68
           MA  LQ  M   +P SSS  P            N +T   +  A + AKIP+PPINPKDP
Sbjct: 1   MASCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPPINPKDP 60

Query: 69  FLSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPP 128
           FLS LAS+A+ SPE LL+RP N+D  PYLDIFDSPQLM++PAQVERSV+YNEHR R PPP
Sbjct: 61  FLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPP 120

Query: 129 DLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVA 188
           DLPS+LL GRIVYIGMPLVPAVTELV+A+LMYLQW+DPKEPIYIYINS+GTTRDDGETV 
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180

Query: 189 METEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPS 248
           ME+EGFAIYD++MQLKNE+HT+ VGAAIGQACLLL+AGTKG+RFMMPH+KAMIQQPRVPS
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 240

Query: 249 SGLMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVID 308
           SGLMPASDVLIRAKEVITNRD LVELL+KHTGNS+ETVAN M+RP+YMDA KAKEFGVID
Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300

Query: 309 KILWRGQEKIMAEVASPEDWDKGAGIKAV 328
           +ILWRGQEKI+A+V   E++DK AGIK+V
Sbjct: 301 RILWRGQEKIIADVVPSEEFDKNAGIKSV 329

[Close]

BLAST of CmoCh05G011370 vs. TAIR 10
Match: AT1G09130.3 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 479.9 bits (1234), Expect = 1.6e-135
Identity = 245/328 (74.70%), Postives = 280/328 (85.37%), Query Frame = 0


Query: 9   MAVSLQKPMAMAVPSSSSRLPR---------GINFRTC-CSMNATSKAKIPLPPINPKDP 68
           MA  LQ  M   +P SSS  P            N +T   +  A + AKIP+PPINPKDP
Sbjct: 1   MASCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPPINPKDP 60

Query: 69  FLSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPP 128
           FLS LAS+A+ SPE LL+RP N+D  PYLDIFDSPQLM++PAQVERSV+YNEHR R PPP
Sbjct: 61  FLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPP 120

Query: 129 DLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVA 188
           DLPS+LL GRIVYIGMPLVPAVTELV+A+LMYLQW+DPKEPIYIYINS+GTTRDDGETV 
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180

Query: 189 METEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPS 248
           ME+EGFAIYD++MQLKNE+HT+ VGAAIGQACLLL+AGTKG+RFMMPH+KAMIQQPRVPS
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 240

Query: 249 SGLMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVID 308
           SGLMPASDVLIRAKEVITNRD LVELL+KHTGNS+ETVAN M+RP+YMDA KAKEFGVID
Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300

Query: 309 KILWRGQEKIMAEVASPEDWDKGAGIKA 327
           +ILWRGQEKI+A+V   E++DK AGIK+
Sbjct: 301 RILWRGQEKIIADVVPSEEFDKNAGIKS 328

[Close]

BLAST of CmoCh05G011370 vs. TAIR 10
Match: AT1G49970.1 (CLP protease proteolytic subunit 1 )

HSP 1 Score: 176.0 bits (445), Expect = 4.9e-44
Identity = 94/190 (49.47%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 112 RSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTR 171
           R R  PPDLPSLLL  RI Y+GMP+VPAVTEL++AQ M+L + +P +PIY+YINS GT  
Sbjct: 164 RPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQN 223

Query: 172 DDGETVAMETEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMI 231
           +  ETV  ETE +AI D +   K++++T+  G A GQA +LL+ G KG R + PHS   +
Sbjct: 224 EKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKL 283

Query: 232 QQPRV-PSSGLMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIK 291
             P+V  SSG   A D+ I+AKE+  N +  +ELLAK TG S E +   +KRP Y+ A  
Sbjct: 284 YLPKVNRSSG--AAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQA 343

Query: 292 AKEFGVIDKI 301
           A ++G+ DKI
Sbjct: 344 AIDYGIADKI 351

[Close]

BLAST of CmoCh05G011370 vs. TAIR 10
Match: AT4G17040.1 (CLP protease R subunit 4 )

HSP 1 Score: 172.6 bits (436), Expect = 5.4e-43
Identity = 93/188 (49.47%), Postives = 126/188 (67.02%), Query Frame = 0


Query: 115 RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDG 174
           +PPPDL S L   RIVY+GM LVP+VTEL++A+ +YLQ+ D ++PIY+YINS+GTT+ +G
Sbjct: 101 QPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-NG 160

Query: 175 ETVAMETEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQP 234
           E +  +TE FAIYD M  +K  I TL VG A G+A LLL AG KG R  +P S  MI+QP
Sbjct: 161 EKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQP 220

Query: 235 RVPSSGLMPASDVLIRAKEVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEF 294
                G   A+DV I  KE+   +  +V+L +KH G S E +   MKRP Y    +A E+
Sbjct: 221 IARFQG--QATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEY 280

Query: 295 GVIDKILW 303
           G+IDK+++
Sbjct: 281 GIIDKVVY 285

The following BLAST results are available for this feature:

BLAST of CmoCh05G011370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L770	7.7e-135	74.77	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]
P74466	3.3e-45	45.67	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp...	[more]
Q9L4P4	2.8e-44	43.06	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus el...	[more]
Q9XJ35	6.9e-43	49.47	ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ...	[more]
Q8LB10	7.6e-42	49.47	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]

BLAST of CmoCh05G011370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G379	2.3e-182	100.00	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KFX9	2.4e-179	98.18	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1D9I5	1.2e-162	88.45	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A1S3BXZ3	1.2e-159	87.01	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7U3K5	1.2e-159	87.01	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of CmoCh05G011370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946246.1	4.7e-182	100.00	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]
XP_023545293.1	1.4e-181	99.39	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]
XP_022999027.1	4.9e-179	98.18	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-...	[more]
KAG6599231.1	1.4e-165	99.67	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic,...	[more]
XP_038890491.1	3.4e-164	89.67	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]

BLAST of CmoCh05G011370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09130.1	5.5e-136	74.77	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.2	5.5e-136	74.77	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.3	1.6e-135	74.70	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G49970.1	4.9e-44	49.47	CLP protease proteolytic subunit 1	[more]
AT4G17040.1	5.4e-43	49.47	CLP protease R subunit 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 119..134 score: 36.25 coord: 220..239 score: 33.75 coord: 279..298 score: 38.0 coord: 159..179 score: 33.69 coord: 199..216 score: 40.97
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 128..300 e-value: 1.24276E-75 score: 228.095
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 122..301 e-value: 1.5E-43 score: 148.8
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 27..329
None	No IPR available	GENE3D	3.90.226.10		coord: 93..305 e-value: 2.2E-56 score: 192.6
None	No IPR available	PANTHER	PTHR10381:SF6	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 3, CHLOROPLASTIC	coord: 27..329
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 114..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G011370.1	CmoCh05G011370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity