CmoCh05G011030 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G011030
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pre-mRNA-splicing factor 38
Location	Cmo_Chr05: 8792161 .. 8796044 (+)
RNA-Seq Expression	CmoCh05G011030
Synteny	CmoCh05G011030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTATCCATTTTTTCCGCTCGTAATTCGGATGACATATTTCGCCATCCTCTCCCGTCCGGCGGCAGAATTAGGGTTTCGATTATTCTCCTCTGTCGATTAACGTGCACTGATACCGGTACGGATTTTGCTGTTCTGGTTGTAATGGCAAATCGTACGGACCCAGCTGCGAAAAGCATAAGGGGGACGAATCCGCAGAACCTGGTGGAGAAGATTCTTCGCTCCAAGATCTATCAGAACAATTACTGGAAGGAGCAATGTTTTGGTTTGACGGCGGAGACATTGGTCGACAAAGCCATGGAGCTCGACCATCTCGGTGGTACATATGGTGGCAACCGCAAGCCCACGCCGTTCATGTGTCTCGTCATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATCGTTATCGAGTTCATTAAGAACGAAGACTACAAGTAACTGTCATTGTCATTATAGTTTTCAATGAATATAACTTTGCATTTTTGTTACCTAGAAGCGTTTAGGAGTAGGGTTAATTAGAGGGAATGTTTCAATTGTTTGTTTTATGGAGTTTAAAGAAACCATTATTTTGGGAACTTACTGTGAAAATTAAATACTAGTAGGTCTGAGTTTTTGGAGTTGATCAGTGAATTGGAAATTAAGATTAGGATTGTGAATAAGTTTAGAACTTCTGCATGAACCCTATATTTGTTTATTGTGATTTGATAAGCATTGGAAATTCAGATTAGGCTTGTGGTTGAGCTAATTGAAGTACATTGGAAATGCTTTCTGTACCTCATGGTGTCCTGTAGTTCTTAAAGCTGTTGCTCACTCGCCTTAGTTTGCAATGATTGATTTTATACTGTATAGTCTTGAAAATGCGTTGTCTGCTTGGATTTAAAATTTTCTTCTGTCAATTAATAACTATGTTGTGTTAGTGTAAACTTTCTCTTGTAATTTCCTGTGGATGTTATGTTTTTTTTTTTCTAGTCTCTTTCAAGCATTATTTTGAATTTTTTTTTTTTTTTTTTGGGACATAGATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGACTCACTGGGACTGATGTTGATGTGTATCGTTACCTGGAGCCTCTGTACAACGATTATCGGAAATTGAGGAGAAAATTAGCTGATGGATGTAAGATTCTGGGGCCTCTTTTTGAATTTTATCTAATTAGTTATTGTGAAAACGACTTGATTTTACTTTCTTGTCACGTTAATGTATTTCTAATTATGATCTCCTCTGTAAAAAAAGTCATGAACTTGTCTTATTTTTATCAGGTTTTTCTTTAACGCACGTGGATGAAGTCATTGATGAACTTCTTACAAAAGATTATTCATGTGACATTGCTCTGCCACGTGTCAAAAAGAGGTATCGTACTGATTACTCATGTGACTATTTCCGAGTCAGTTTATTTTTCAAGTGGAAGTTGATAATGTCTTACTAAAATCAGGGCCTCAATAGAAATATGCATTATTCATTCTTTGACAAACAGAAGTACATGGGTCACAAATTCTAAATGTTGCTGTTCTGTTTCTCTCTCTCTCTCTCTTATGTGTCTCTAGTGTTCAGTTTTGAATGCGATGCTTCTTCTTGAAGTAACCTAAGTAAGATACACTTTGTAATGGCAGATGGACCCTTGAATCTACTGGTTCACTGCCTGCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAAGAGGATGTTGAGCCAATCAATGATTCTTTGGAAGATGATATTCATGAAAAGGTACAAACGCATTCTCTGTTTATATTTGTAAAAACATCTAATTTTCATTTTCTCGTCCTTACTAACCCTTTTGAGATCTTGCATCTGCAGAATTATTATCGAGGGAGAAGTCCTGTGCGGGAGAGAGACAGAGACAGAAGGCGTGATAGTCACAGACACAGGTCCGATCCCCCGTCTGTTTTTTGGTTTCTTCTCCTTCCCTGTTCTCTCATTTTTTATGTTTGCAACTGTGATGCTCTTTCTGAATTTGTGAATATTTCCTCCTGTGGAGGGTTCCATTGATTGATATCTCCAGTCTATTAGCTGCCTTCATTTCGTGAATCACATAAATTTTTCGTTGAATGGGAAGTATAAGGTCCAAGGCCAAATTCAAAAATTTTGAGCTCAATTTGTCTTTTGCTCGAGTCTTTTGTTGCCAATGCTATTCTCTTAGTAGAGTTGGTGCTGGCGAAAGTTGAAAAATTAGATCAAACAAAAATTAGGAGATGAATAGGAGAATGGATGTTGTGGCTCAGCATGGGAGTTATCTACCTGTGTCTGGAAATCCATGCTATTGCCTATCTTAGGACTGGATTGGGTTTATTAGTTGCTTCTAAGCTCGTGCCCTTTCGACCACCGCACGTAGATAAAGCTGATTGCTAAGTTGGTTTTGGTTTTGGTTTTTGACCATGCGATTTCTTTGAGTGCTAATTTAACTAAAACGGATCCTTACTTGATCTGGTTCTTTTTAAAATTACGGAGCTGGAAGCAGTCTGAATCTGTAATTCTTGGATTGTTATCCATACTGCATTAACATTCATATGTTTTCTGTCACAACCATGGCATTTCAAGCCGTTGGTTGCTCGCTGCTTCCTACAGTGAATTCGCAAGGTCCTGCCAGGTTTCTCTGTACTGACAGTGTGCAGCTGAGAAGTATGATGGATCGTACATATATTTTTCCTAGTGATTTTTTTTCTCAACTTTATTTTTGTATTGCCTTCAATGATATCTTGGTGACCATACAGGCTACAGCTGAGAACTACTCATATGCTTTTCCTTTTTCATTTTCATCTATTATTTTGATTATTTTTCGGGCAACATCGAGTTTGTATTTGGTGTTCTACCCGAATGTTAAACCTTTCTGTATCTTATGCTTTTCCTGTGAAATTACCTGTTCATGCATCCAGGATAGGATATTTTATTCTCCATATTTTGATCCTAAAATCCATGTTCATAATGCATTGCTTACTTGCATTTATGAGCTGTCTTACTACATCGTTCCATTGAGTGGGAAGAATTTGATCTTTTGATACACCACATTGTTCCTTTGTTTTATCACAGGGACCGAGATTATGAAAGAGACCGGGATAATGATAGAGACTATGATAGAGATCGGGGTCGTGGAAGGGAAAGAGATAGAGATCGAGAAAGGGATCGAGATCGGGATCGGGATAGGGACAGGGATAGAGACAGAGATAGGGATAGGGATCGCTATCACCTTAGGGATGAGAAGGAATATGGCAGAGATCGAGATAGGGAAAGAGAAGGCAGGGAGAGGGAGAGGGAGAGGGAGAGGCGAGACAGAGATCGTGGTCGGAGAAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAAGATCGAGAGGATGGGGAGTACCGGAAGAGACACACCCGTAGCAGCATTAGTCCTAGAAGAAGGAACGGGGCAGAGGATAGAGAGGAGCCGAAGAGGAAGAAGGAAAAGAAAGAGAAGAAGGGAGACGGGGCAGGCGAGGAAGACCCCGAAATCGCAGAATGGAACAGAATTCGTGCTTCTCTTGGAATGGCACCTCTGAAGTAGATGTTTGTTGTTCTTCTTCTTCAGTTTGAATGAAGTGCGAGTGAATCATGTTGCATAACTGAAGGTTAGAGGTTGTTGTTATCCATATGAGGAGAGGCTTAAGGTTCTCTGTTTTGTGTATAATATTTGTTTAGTGCTATTACTGTGTTTGTCGAATGATAATATAAATTACATTTGGAAATAGAATAATGTTGGAAGGGTTTGGGTATTTATTTGTTTAATCGAGTGTAAGTGGTTGTGTTAGCCAGTGAGTCGTCCACCACCAAAGTTGGTATTGTTAATTACAAAGAATCCATATGTGCT

mRNA sequence

CAATTATCCATTTTTTCCGCTCGTAATTCGGATGACATATTTCGCCATCCTCTCCCGTCCGGCGGCAGAATTAGGGTTTCGATTATTCTCCTCTGTCGATTAACGTGCACTGATACCGGTACGGATTTTGCTGTTCTGGTTGTAATGGCAAATCGTACGGACCCAGCTGCGAAAAGCATAAGGGGGACGAATCCGCAGAACCTGGTGGAGAAGATTCTTCGCTCCAAGATCTATCAGAACAATTACTGGAAGGAGCAATGTTTTGGTTTGACGGCGGAGACATTGGTCGACAAAGCCATGGAGCTCGACCATCTCGGTGGTACATATGGTGGCAACCGCAAGCCCACGCCGTTCATGTGTCTCGTCATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATCGTTATCGAGTTCATTAAGAACGAAGACTACAAATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGACTCACTGGGACTGATGTTGATGTGTATCGTTACCTGGAGCCTCTGTACAACGATTATCGGAAATTGAGGAGAAAATTAGCTGATGGATGTTTTTCTTTAACGCACGTGGATGAAGTCATTGATGAACTTCTTACAAAAGATTATTCATGTGACATTGCTCTGCCACGTGTCAAAAAGAGATGGACCCTTGAATCTACTGGTTCACTGCCTGCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAAGAGGATGTTGAGCCAATCAATGATTCTTTGGAAGATGATATTCATGAAAAGAATTATTATCGAGGGAGAAGTCCTGTGCGGGAGAGAGACAGAGACAGAAGGCGTGATAGTCACAGACACAGGGACCGAGATTATGAAAGAGACCGGGATAATGATAGAGACTATGATAGAGATCGGGGTCGTGGAAGGGAAAGAGATAGAGATCGAGAAAGGGATCGAGATCGGGATCGGGATAGGGACAGGGATAGAGACAGAGATAGGGATAGGGATCGCTATCACCTTAGGGATGAGAAGGAATATGGCAGAGATCGAGATAGGGAAAGAGAAGGCAGGGAGAGGGAGAGGGAGAGGGAGAGGCGAGACAGAGATCGTGGTCGGAGAAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAAGATCGAGAGGATGGGGAGTACCGGAAGAGACACACCCGTAGCAGCATTAGTCCTAGAAGAAGGAACGGGGCAGAGGATAGAGAGGAGCCGAAGAGGAAGAAGGAAAAGAAAGAGAAGAAGGGAGACGGGGCAGGCGAGGAAGACCCCGAAATCGCAGAATGGAACAGAATTCGTGCTTCTCTTGGAATGGCACCTCTGAAGTAGATGTTTGTTGTTCTTCTTCTTCAGTTTGAATGAAGTGCGAGTGAATCATGTTGCATAACTGAAGGTTAGAGGTTGTTGTTATCCATATGAGGAGAGGCTTAAGGTTCTCTGTTTTGTGTATAATATTTGTTTAGTGCTATTACTGTGTTTGTCGAATGATAATATAAATTACATTTGGAAATAGAATAATGTTGGAAGGGTTTGGGTATTTATTTGTTTAATCGAGTGTAAGTGGTTGTGTTAGCCAGTGAGTCGTCCACCACCAAAGTTGGTATTGTTAATTACAAAGAATCCATATGTGCT

Coding sequence (CDS)

ATGGCAAATCGTACGGACCCAGCTGCGAAAAGCATAAGGGGGACGAATCCGCAGAACCTGGTGGAGAAGATTCTTCGCTCCAAGATCTATCAGAACAATTACTGGAAGGAGCAATGTTTTGGTTTGACGGCGGAGACATTGGTCGACAAAGCCATGGAGCTCGACCATCTCGGTGGTACATATGGTGGCAACCGCAAGCCCACGCCGTTCATGTGTCTCGTCATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATCGTTATCGAGTTCATTAAGAACGAAGACTACAAATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGACTCACTGGGACTGATGTTGATGTGTATCGTTACCTGGAGCCTCTGTACAACGATTATCGGAAATTGAGGAGAAAATTAGCTGATGGATGTTTTTCTTTAACGCACGTGGATGAAGTCATTGATGAACTTCTTACAAAAGATTATTCATGTGACATTGCTCTGCCACGTGTCAAAAAGAGATGGACCCTTGAATCTACTGGTTCACTGCCTGCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAAGAGGATGTTGAGCCAATCAATGATTCTTTGGAAGATGATATTCATGAAAAGAATTATTATCGAGGGAGAAGTCCTGTGCGGGAGAGAGACAGAGACAGAAGGCGTGATAGTCACAGACACAGGGACCGAGATTATGAAAGAGACCGGGATAATGATAGAGACTATGATAGAGATCGGGGTCGTGGAAGGGAAAGAGATAGAGATCGAGAAAGGGATCGAGATCGGGATCGGGATAGGGACAGGGATAGAGACAGAGATAGGGATAGGGATCGCTATCACCTTAGGGATGAGAAGGAATATGGCAGAGATCGAGATAGGGAAAGAGAAGGCAGGGAGAGGGAGAGGGAGAGGGAGAGGCGAGACAGAGATCGTGGTCGGAGAAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAAGATCGAGAGGATGGGGAGTACCGGAAGAGACACACCCGTAGCAGCATTAGTCCTAGAAGAAGGAACGGGGCAGAGGATAGAGAGGAGCCGAAGAGGAAGAAGGAAAAGAAAGAGAAGAAGGGAGACGGGGCAGGCGAGGAAGACCCCGAAATCGCAGAATGGAACAGAATTCGTGCTTCTCTTGGAATGGCACCTCTGAAGTAG

Protein sequence

MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGTYGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPARKSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYERDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAEDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK

Homology

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BLAST of CmoCh05G011030 vs. ExPASy Swiss-Prot
Match: Q8LB54 (Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana OX=3702 GN=PRP38 PE=1 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.9e-127
Identity = 272/406 (67.00%), Postives = 311/406 (76.60%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+ +WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK+R+KL+DG FSLTHVDEVI+ELLTKDYSCDIA+PR+KKRWTLE  G L  R
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSP--VRERDRDRRRDSHRHRDRD 240
           KS LEDDFEEEEEKE+ E I D  ED++ +    R +SP   RERDRDRRRDSHRHRDRD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQ----RRKSPERERERDRDRRRDSHRHRDRD 240

Query: 241 YER----DRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEY 300
           Y+R    DRD+DRDY+R+RG GR+RDR+R+RD  R+RDRDR+R RDR+RDR         
Sbjct: 241 YDRDYDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRERGRDRERDR--------- 300

Query: 301 GRDRDREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRN 360
                                RDR RRRS SRSR           RKRH    +      
Sbjct: 301 ---------------------RDRARRRSRSRSRD----------RKRHETDDV------ 354

Query: 361 GAEDREEPKRKKEKKEK-KGDGAGEEDPEIAEWNRIRASLGMAPLK 400
              DREEPK+KKEKKEK K DG    +PEIAE NR+RASLGM PL+
Sbjct: 361 --RDREEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLR 354

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BLAST of CmoCh05G011030 vs. ExPASy Swiss-Prot
Match: Q7JVL3 (Pre-mRNA-splicing factor 38 OS=Drosophila melanogaster OX=7227 GN=Prp38 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.7e-64
Identity = 177/340 (52.06%), Postives = 223/340 (65.59%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   AK++ GTNPQ L+EKI+RS+IY + YWKEQCF LTAE LVDKAMEL  +GG 
Sbjct: 1   MANRTVKEAKNVHGTNPQYLIEKIIRSRIYDSKYWKEQCFALTAELLVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPT F+CL +KMLQIQPEK+IV+EFIKNE++KYVR LGAFYLRLTG  +D Y+YL
Sbjct: 61  YGGNIKPTQFLCLTLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYLRLTGAALDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLY D RKLRR+   G F + ++DE IDELL  D  CDI LPR++KR  LE    +  +
Sbjct: 121 EPLYIDNRKLRRQNRAGQFEIVYMDEYIDELLRNDRVCDIILPRIQKRSILEENNEIEPK 180

Query: 181 KSALEDDFEEE--EEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDS---HRHR 240
            S L++D ++E   ++E  +  N   E+    +   R RS  R R R+R R S   +  R
Sbjct: 181 VSVLDEDLDDELPSDEEKADETNRPKENSTAVRRPRRVRSKSRSRSRERERRSGQGNSAR 240

Query: 241 DRDYERDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDR-DRDRDRDRDRYHLRDEKEY 300
            RDY    D   DYDR R R R RD   E D DR ++  R DR+R+R +DR  +R+    
Sbjct: 241 SRDY---YDELEDYDRQRNRVRNRDTHNE-DYDRRQNNGRHDRERER-QDRDSIRE---- 300

Query: 301 GRDRDREREGRERERERERRDRDRGRRRSHSRSRSRSKDR 335
            R+RD +R+ R+RERERE   RDRGR     R     +DR
Sbjct: 301 -RERDGDRDRRDRERERE---RDRGRHDQRERDSRGERDR 327

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BLAST of CmoCh05G011030 vs. ExPASy Swiss-Prot
Match: Q28H87 (Pre-mRNA-splicing factor 38A OS=Xenopus tropicalis OX=8364 GN=prpf38a PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-61
Identity = 161/324 (49.69%), Postives = 204/324 (62.96%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A S+ GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL ++GG 
Sbjct: 1   MANRTVKDAHSVHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR LGA Y+RLTGT  D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRTLGALYMRLTGTATDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK++ +  +G F L HVDE ID+LL ++  CD+ LPR++KR+ LE T  L  R
Sbjct: 121 EPLYNDYRKVKVQNRNGEFELMHVDEFIDQLLHEERVCDVILPRLQKRFVLEETEQLDPR 180

Query: 181 KSALE---DDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDR 240
            SALE   DD E  EE+ED +        + H +NY       R+ DR RR  S R+R  
Sbjct: 181 VSALEEDMDDVESSEEEEDEDEKGRDPSPEHHRRNY-------RDLDRPRRSPSPRYR-- 240

Query: 241 DYERDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRD 300
                R   R   R R R  +R       R+R R +   R R R R+R H    K  G  
Sbjct: 241 -----RSRSRS-PRRRSRSPKRRSPSPPRRERHRSKSPRRHRSRSRERRHRSKSKSPGHH 300

Query: 301 RDREREGRERERERERRDRDRGRR 322
           R        +  ER ++   + RR
Sbjct: 301 RSHRHRSHSKSPERSKKSHKKSRR 309

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BLAST of CmoCh05G011030 vs. ExPASy Swiss-Prot
Match: Q0P5I6 (Pre-mRNA-splicing factor 38A OS=Bos taurus OX=9913 GN=PRPF38A PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.0e-61
Identity = 164/327 (50.15%), Postives = 205/327 (62.69%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CDI LPR++KR+ LE    L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
            SALE+D ++ E  E+ E  ++ LE         R  SP      D RR S+R  D+   
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLE---------RVPSP------DHRRRSYRDLDKP-- 240

Query: 241 RDRDNDRDYDRDRGRG-RERDRDRER-----DRDRDRDRDRDRDRDRDRDRYHLRDEKEY 300
             R     Y R R R  R R R  +R      R+R R +   R R R RDR H    K  
Sbjct: 241 -RRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSP 300

Query: 301 GRDRDREREGRERERERERRDRDRGRR 322
           G  R        +  ER ++   + RR
Sbjct: 301 GHHRSHRHRSHSKSPERSKKSHKKSRR 309

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BLAST of CmoCh05G011030 vs. ExPASy Swiss-Prot
Match: Q8NAV1 (Pre-mRNA-splicing factor 38A OS=Homo sapiens OX=9606 GN=PRPF38A PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.0e-61
Identity = 164/327 (50.15%), Postives = 205/327 (62.69%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CDI LPR++KR+ LE    L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
            SALE+D ++ E  E+ E  ++ LE         R  SP      D RR S+R  D+   
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLE---------RVPSP------DHRRRSYRDLDKP-- 240

Query: 241 RDRDNDRDYDRDRGRG-RERDRDRER-----DRDRDRDRDRDRDRDRDRDRYHLRDEKEY 300
             R     Y R R R  R R R  +R      R+R R +   R R R RDR H    K  
Sbjct: 241 -RRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSP 300

Query: 301 GRDRDREREGRERERERERRDRDRGRR 322
           G  R        +  ER ++   + RR
Sbjct: 301 GHHRSHRHRSHSKSPERSKKSHKKSRR 309

[Close]

BLAST of CmoCh05G011030 vs. ExPASy TrEMBL
Match: A0A6J1G4M6 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111450740 PE=3 SV=1)

HSP 1 Score: 732.6 bits (1890), Expect = 8.6e-208
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300
           RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR
Sbjct: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300

Query: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAEDRE 360
           EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAEDRE
Sbjct: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAEDRE 360

Query: 361 EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK
Sbjct: 361 EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 399

[Close]

BLAST of CmoCh05G011030 vs. ExPASy TrEMBL
Match: A0A6J1KGY3 (Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111493773 PE=3 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 1.8e-197
Identity = 384/399 (96.24%), Postives = 388/399 (97.24%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAK+IRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKNIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKLADGCFSLTH+DEVIDELLTKDYSCDIALPRVKKRWTLES+GSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHMDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           KSALEDDFEEEEEKEDVEPINDSLE DIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEGDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300
           R    DRD DRDRGRGRERDRDRE    RDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR
Sbjct: 241 R----DRDIDRDRGRGRERDRDRE----RDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300

Query: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAEDRE 360
           EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSS+SPRRRNG EDRE
Sbjct: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSVSPRRRNGVEDRE 360

Query: 361 EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK
Sbjct: 361 EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 391

[Close]

BLAST of CmoCh05G011030 vs. ExPASy TrEMBL
Match: A0A1S3BXB0 (Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103494470 PE=3 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.7e-192
Identity = 375/401 (93.52%), Postives = 387/401 (96.51%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKL+DGCFSL+HVDEVIDELLTKDYSCDIALPRVKKRWTLES+GSLP R
Sbjct: 121 EPLYNDYRKLRRKLSDGCFSLSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           KSALEDDFEEEEEKE+ EPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRD--RDRDRDRDRDRDRDRDRYHLRDEKEYGRDR 300
           RDRD DRDYDRDRGRGRERDRDRERDRD  RDRDRDR+R+RDRDRDRY LRDEKEYGRDR
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRERDRDRDRERERDRDRDRYRLRDEKEYGRDR 300

Query: 301 DREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAED 360
           DREREG    RERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRH+RSS+SPRRR+G ED
Sbjct: 301 DREREG----RERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGVED 360

Query: 361 REEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           REEPK+KKEKKEKK  GAGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 REEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 397

[Close]

BLAST of CmoCh05G011030 vs. ExPASy TrEMBL
Match: A0A6J1FBK8 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111443943 PE=3 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 4.0e-189
Identity = 373/404 (92.33%), Postives = 384/404 (95.05%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRR+LADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRW LESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           KSALEDDFEEEEEKEDVEPIND+LED+IHEKNYYRGRSPVRERD+DRR DSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRHDSHRHRDRDYD 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRD----RDRDRDRDRDRYHLRDEKEYGR 300
           RDRD DRDYDRDRGRGRERDRDR+RDRDRDRDRD    RDRDRDRDRDRY LRD+KEY R
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300

Query: 301 DRDREREGRERERERERRDRD-RGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNG 360
           DRDREREG    RERERRDRD  GRRRSHSRSRSRSKDREDGEYRKRH RSS SPRRR+G
Sbjct: 301 DRDREREG----RERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDG 360

Query: 361 AEDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           AEDR+EPKRKKEKKEKK  GAGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 AEDRDEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 400

[Close]

BLAST of CmoCh05G011030 vs. ExPASy TrEMBL
Match: A0A6J1HPQ9 (Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111465574 PE=3 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 6.8e-189
Identity = 370/400 (92.50%), Postives = 382/400 (95.50%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRR+LADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRW LESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           KSALEDDFEEEEEKEDVEPIND+LED+IHEKNYYRGRSPVRERD+DRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300
           RDRD DRDYDRDRGRGRERDRDR+RDRDRDRDRDR RDRDRDRDRY LRD+KEY RDRD 
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSRDRDG 300

Query: 301 EREGRERERERERRDRD-RGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAEDR 360
           EREG    RERERRDRD  GRRRSHSR+RSRSKDREDGEYRKRH R S SPRRR+GAEDR
Sbjct: 301 EREG----RERERRDRDHHGRRRSHSRNRSRSKDREDGEYRKRHARCSASPRRRDGAEDR 360

Query: 361 EEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           +EPKRKKEKKEKK  GAGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 DEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 396

[Close]

BLAST of CmoCh05G011030 vs. NCBI nr
Match: XP_022946772.1 (pre-mRNA-splicing factor 38-like [Cucurbita moschata])

HSP 1 Score: 732.6 bits (1890), Expect = 1.8e-207
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300
           RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR
Sbjct: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300

Query: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAEDRE 360
           EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAEDRE
Sbjct: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAEDRE 360

Query: 361 EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK
Sbjct: 361 EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 399

[Close]

BLAST of CmoCh05G011030 vs. NCBI nr
Match: XP_023545282.1 (pre-mRNA-splicing factor 38-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 727.6 bits (1877), Expect = 5.7e-206
Identity = 399/401 (99.50%), Postives = 399/401 (99.50%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRE--RDRDRRRDSHRHRDRD 240
           KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRE  RDRDRRRDSHRHRDRD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRDRRRDSHRHRDRD 240

Query: 241 YERDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDR 300
           YERDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDR
Sbjct: 241 YERDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDR 300

Query: 301 DREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAED 360
           DREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAED
Sbjct: 301 DREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAED 360

Query: 361 REEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           REEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK
Sbjct: 361 REEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 401

[Close]

BLAST of CmoCh05G011030 vs. NCBI nr
Match: KAG7030134.1 (Pre-mRNA-splicing factor 38 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 722.6 bits (1864), Expect = 1.8e-204
Identity = 399/403 (99.01%), Postives = 399/403 (99.01%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRE--RDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDR 300
           RDRDNDRDYDRDRGRGRERDRDRE  RDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDR
Sbjct: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDR 300

Query: 301 DREREG--RERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGA 360
           DREREG  RERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGA
Sbjct: 301 DREREGRERERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGA 360

Query: 361 EDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           EDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK
Sbjct: 361 EDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 403

[Close]

BLAST of CmoCh05G011030 vs. NCBI nr
Match: KAG6599199.1 (Pre-mRNA-splicing factor 38, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 720.3 bits (1858), Expect = 9.1e-204
Identity = 398/405 (98.27%), Postives = 399/405 (98.52%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRE--RDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDR 300
           RDRDNDRDYDRDRGRGRERDRDRE  RDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDR
Sbjct: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDR 300

Query: 301 DREREG----RERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRN 360
           DREREG    RERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRH+RSSISPRRRN
Sbjct: 301 DREREGRERERERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSISPRRRN 360

Query: 361 GAEDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           GAEDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK
Sbjct: 361 GAEDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 405

[Close]

BLAST of CmoCh05G011030 vs. NCBI nr
Match: XP_022999384.1 (pre-mRNA-splicing factor 38-like [Cucurbita maxima])

HSP 1 Score: 698.4 bits (1801), Expect = 3.7e-197
Identity = 384/399 (96.24%), Postives = 388/399 (97.24%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAK+IRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKNIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKLADGCFSLTH+DEVIDELLTKDYSCDIALPRVKKRWTLES+GSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHMDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           KSALEDDFEEEEEKEDVEPINDSLE DIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEGDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300
           R    DRD DRDRGRGRERDRDRE    RDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR
Sbjct: 241 R----DRDIDRDRGRGRERDRDRE----RDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300

Query: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAEDRE 360
           EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSS+SPRRRNG EDRE
Sbjct: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSVSPRRRNGVEDRE 360

Query: 361 EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK
Sbjct: 361 EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 391

[Close]

BLAST of CmoCh05G011030 vs. TAIR 10
Match: AT2G40650.1 (PRP38 family protein )

HSP 1 Score: 457.2 bits (1175), Expect = 1.3e-128
Identity = 272/406 (67.00%), Postives = 311/406 (76.60%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+ +WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK+R+KL+DG FSLTHVDEVI+ELLTKDYSCDIA+PR+KKRWTLE  G L  R
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSP--VRERDRDRRRDSHRHRDRD 240
           KS LEDDFEEEEEKE+ E I D  ED++ +    R +SP   RERDRDRRRDSHRHRDRD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQ----RRKSPERERERDRDRRRDSHRHRDRD 240

Query: 241 YER----DRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEY 300
           Y+R    DRD+DRDY+R+RG GR+RDR+R+RD  R+RDRDR+R RDR+RDR         
Sbjct: 241 YDRDYDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRERGRDRERDR--------- 300

Query: 301 GRDRDREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRN 360
                                RDR RRRS SRSR           RKRH    +      
Sbjct: 301 ---------------------RDRARRRSRSRSRD----------RKRHETDDV------ 354

Query: 361 GAEDREEPKRKKEKKEK-KGDGAGEEDPEIAEWNRIRASLGMAPLK 400
              DREEPK+KKEKKEK K DG    +PEIAE NR+RASLGM PL+
Sbjct: 361 --RDREEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLR 354

[Close]

BLAST of CmoCh05G011030 vs. TAIR 10
Match: AT5G37370.1 (PRP38 family protein )

HSP 1 Score: 50.4 bits (119), Expect = 3.8e-06
Identity = 100/340 (29.41%), Postives = 158/340 (46.47%), Query Frame = 0


Query: 18  QNLVEKILRSKIYQNNYWKEQCFGL-TAETLVDKAM-ELDHLGGTYGGN-RKPTPFMCLV 77
           ++L+EK+L   I  ++Y+KE  +GL T   ++D+   +++H+    GGN R P+   CL+
Sbjct: 12  ESLLEKVLSMNILSSDYFKE-LYGLKTYHEVIDEIYNQVNHVEPWMGGNCRGPSTAYCLL 71

Query: 78  MKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRKL 137
            K   ++   + +   +K+ D  Y+R +G  YLR       ++ + EP   D  +     
Sbjct: 72  YKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKDDEEFSPG- 131

Query: 138 ADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTG-----SLPARKSALEDDFE 197
           ++G   +T +   + +LL   Y  D   PR+      +        +LP + S    D  
Sbjct: 132 SNG--RMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKMNLPTKPSGSTGDMT 191

Query: 198 EEEEKEDVEP--INDSLEDDIHEKNYY----RGRSPVRE----------RDRDRRRDSHR 257
              E     P  +  SL     ++  +    RG SPVR            D  ++R   R
Sbjct: 192 RGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRR 251

Query: 258 HRDRDYERDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKE 317
            + RDY  DRD+D          R+R+R+RE+DR+R+R RDR R+R+RD           
Sbjct: 252 SQSRDYYSDRDSD----------RQREREREKDRERERGRDRYRERERD----------- 311

Query: 318 YGRDRDREREGRERERERE-RRDRDRGRRRSHSRSRSRSK 333
           YG DR   R+   R R  +   DR R  RRS SRSRSRS+
Sbjct: 312 YGNDRRSRRDYDSRSRRNDYEDDRSRHDRRSRSRSRSRSR 326

[Close]

BLAST of CmoCh05G011030 vs. TAIR 10
Match: AT5G37370.2 (PRP38 family protein )

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-05
Identity = 98/335 (29.25%), Postives = 157/335 (46.87%), Query Frame = 0


Query: 18  QNLVEKILRSKIYQNNYWKEQCFGL-TAETLVDKAM-ELDHLGGTYGGN-RKPTPFMCLV 77
           ++L+EK+L   I  ++Y+KE  +GL T   ++D+   +++H+    GGN R P+   CL+
Sbjct: 12  ESLLEKVLSMNILSSDYFKE-LYGLKTYHEVIDEIYNQVNHVEPWMGGNCRGPSTAYCLL 71

Query: 78  MKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRKL 137
            K   ++   + +   +K+ D  Y+R +G  YLR       ++ + EP   D  +     
Sbjct: 72  YKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKDDEEFSPG- 131

Query: 138 ADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPARKSALEDDFEEEEEK 197
           ++G  +   V    D L  +     I +P +++  +     +LP + S    D     E 
Sbjct: 132 SNGRMTTMGVYYYFDTLFPR-----IPVPVMRQIVSNLEKMNLPTKPSGSTGDMTRGSED 191

Query: 198 EDVEP--INDSLEDDIHEKNYY----RGRSPVRE----------RDRDRRRDSHRHRDRD 257
               P  +  SL     ++  +    RG SPVR            D  ++R   R + RD
Sbjct: 192 TARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRD 251

Query: 258 YERDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDR 317
           Y  DRD+D          R+R+R+RE+DR+R+R RDR R+R+RD           YG DR
Sbjct: 252 YYSDRDSD----------RQREREREKDRERERGRDRYRERERD-----------YGNDR 311

Query: 318 DREREGRERERERE-RRDRDRGRRRSHSRSRSRSK 333
              R+   R R  +   DR R  RRS SRSRSRS+
Sbjct: 312 RSRRDYDSRSRRNDYEDDRSRHDRRSRSRSRSRSR 318

[Close]

BLAST of CmoCh05G011030 vs. TAIR 10
Match: AT1G60900.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 43.1 bits (100), Expect = 6.0e-04
Identity = 74/161 (45.96%), Postives = 100/161 (62.11%), Query Frame = 0


Query: 202 DSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYERDRDNDRDYDRDRGRGRERDR 261
           DS   + H+    +  S + E+D +  RD   ++DRD E+DRD ++  DRDR + R+RDR
Sbjct: 33  DSKSRESHDLK--KDSSKISEKDNENGRDKDGNKDRDREKDRDREKSRDRDREKSRDRDR 92

Query: 262 DRERDRDRDRDR-DRDRDRDRDRDRYHLRDEKE---YGRDRDREREGRERERERERRDRD 321
           DRER +DR RDR  RDR RDR R+R   RD+ +   + R RDR+R  R R+R+RE R R 
Sbjct: 93  DRERSKDRQRDRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDRDRR-RSRDRDREVRHRR 152

Query: 322 RGRRRSHSRS--RSRSKDREDGEYRKR-HTRSSISPRRRNG 356
           R R RS SRS  RSRS+ R   E+R R  +RS    +RR+G
Sbjct: 153 RSRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKRRSG 190

The following BLAST results are available for this feature:

BLAST of CmoCh05G011030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB54	1.9e-127	67.00	Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana OX=3702 GN=PRP38 PE=1 SV=1	[more]
Q7JVL3	1.7e-64	52.06	Pre-mRNA-splicing factor 38 OS=Drosophila melanogaster OX=7227 GN=Prp38 PE=1 SV=...	[more]
Q28H87	1.4e-61	49.69	Pre-mRNA-splicing factor 38A OS=Xenopus tropicalis OX=8364 GN=prpf38a PE=2 SV=1	[more]
Q0P5I6	4.0e-61	50.15	Pre-mRNA-splicing factor 38A OS=Bos taurus OX=9913 GN=PRPF38A PE=2 SV=1	[more]
Q8NAV1	4.0e-61	50.15	Pre-mRNA-splicing factor 38A OS=Homo sapiens OX=9606 GN=PRPF38A PE=1 SV=1	[more]

BLAST of CmoCh05G011030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4M6	8.6e-208	100.00	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111450740 PE=3 S...	[more]
A0A6J1KGY3	1.8e-197	96.24	Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111493773 PE=3 SV=...	[more]
A0A1S3BXB0	1.7e-192	93.52	Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103494470 PE=3 SV=1	[more]
A0A6J1FBK8	4.0e-189	92.33	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111443943 PE=3 S...	[more]
A0A6J1HPQ9	6.8e-189	92.50	Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111465574 PE=3 SV=...	[more]

BLAST of CmoCh05G011030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946772.1	1.8e-207	100.00	pre-mRNA-splicing factor 38-like [Cucurbita moschata]	[more]
XP_023545282.1	5.7e-206	99.50	pre-mRNA-splicing factor 38-like [Cucurbita pepo subsp. pepo]	[more]
KAG7030134.1	1.8e-204	99.01	Pre-mRNA-splicing factor 38 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6599199.1	9.1e-204	98.27	Pre-mRNA-splicing factor 38, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022999384.1	3.7e-197	96.24	pre-mRNA-splicing factor 38-like [Cucurbita maxima]	[more]

BLAST of CmoCh05G011030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40650.1	1.3e-128	67.00	PRP38 family protein	[more]
AT5G37370.1	3.8e-06	29.41	PRP38 family protein	[more]
AT5G37370.2	1.1e-05	29.25	PRP38 family protein	[more]
AT1G60900.1	6.0e-04	45.96	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 10..173 e-value: 1.5E-61 score: 207.3
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 1..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..399
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..386
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..317
None	No IPR available	PANTHER	PTHR23142:SF1	PRE-MRNA-SPLICING FACTOR 38A	coord: 1..392

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G011030.1	CmoCh05G011030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome