CmoCh05G010460 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G010460
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr05: 8448931 .. 8452688 (+)
RNA-Seq ExpressionCmoCh05G010460
SyntenyCmoCh05G010460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGGAATCAATCATACAGGTCTCTTGCAGGATTACGCAGAGCTGCACAATGTAATATGTTCTTTTATGCATTTTTTCCCCTGTTTTGATCTCTTCTTTTCATATGTTTCATCTTTACCACTTCTTGTTCTTCGATTATTGTTGTTTTTTTCTTGTTGATTCGCTGCTGAATTTGGTCTGAGATATTAGGAATTGTTTGTCTCTGGTTTTAGAAACGATGAAGATTTGAATAGAGCGCAAGAGGCTTTGAGATTTTATTTGGCTGCTGAGAAAATTGTGAATTACTGAAATATTGCTTTTGATTGCTTTTGATGTTTGTGTTAATTTTTTGTGTCTTTGAATGCTAAAACAACCTTAGAATTGGACAAATTTGTATGTATCCTGGCCCTGGCCCGAGCACCTCAACTGATGCATATATCCTCGACCAAAAGGTTAAACATTCGAACCATTCCATGTGTTTTGTTTTGTGTTTAGTGTTCAAATCATGGTGGCTTCTTGAGATAATTTGCCTTCTGTAATTGCCTACAAGTTGTAAGTTCATACGACTTTGTGATCACGTGTTCATATCGTGATGGCAAGTTACATGGGAGAATAAACATGTTATAGGGTTAGTTTTTTTGATTTCATCGGGTGAGATTAGTCGAGATACGAGGAACTATGAATGTTTTAAATGTTCATAAGTTATAAATTCAATTTTAGACTAGGCCTCTCTAGCGGGGCCTAGTCTAAATTAGTCGAGGTAAGAGTTATAGGGTTAGTTTTCTTATCTGTCGAGCGAGATTAGTCGAGGTACAAGTCAAACTATGAATGTTTCAAACTACCATCTAACTTCAAATTTAGACTAGGCCTCTCACGGGCCTTAGTCTAAATTAGTCGAGGTACGAGTTATAGGGTTGGTTAGTTTTTTAATCTCGTCAAGAGTCGAGGTAGGAGTAAGTATTTTAGAGAGGCCTAGTCTAAATTAGTTGAAGTACGAGTTATAGGGTTGGTTAGTTTTTTAATCTCGTCAAGAGTCGAGGTAGGAGTAAGTATTTTAGAGAGGCCTAGTCTAAATTAGTTGAAGTACTAGTTATAGGGTTACTTTTTTGATCTCGATTGAGATTAGTTGAGGTATGAGTATACAAATGTTTCCATCTCGACTAAATTAGTTGAGGTACAAGTTATAGGGTTACTTTTTTGATCTCGTCGGGTGAGATTAGTCGAGGTACGAGTAACTACAAATGTTTCCATCTAGACTAAATTTGTTGAGGTACAAGTTGTAGGGTTACTTTTTTGATCTCGTCGGGTGAGATTAGTCGAGGTACGAGTATTTCCATCTAGACTAAATTTGTTGAGGTACAAGTTATAGGGTTACTTTTTTGATCTCGTCGGGTGAGATTAGTCAAGGTACGAGTAACTACAAATGTTTCCATTTAGACTAAATTTGTTGAGGTACAAGTTATAGGGTTACTCTTTTGATCTCGTCGGGTGAGATTAGTCGAGGTACGAGTTACTACAAACGTTTCAATCTACCGTCTATAATTTATAACTTCAAATTTAGACTAGGCCTCTCTAGCGGGGCCTAGTCTAAACTAGTCTAGGTACGAGTTATAGGGTTATTTTTTGATCTCGTCGAGTGAGTGAGATTAGTCGAGGTACGAATAACTACAAATGTTTCAATCTACCGTCTATAAGTTATAACTTCAAATTTAGACTAGGCCTTTCTAGCAAACTTAGTCTACGTTATAACTTCAAATCAAGACTAGGCCTAGGCCTTTCTAGCAAACTTAGTCTACGTTATAACTTCAAATCAAGACTAGGCCTCTCTAGCAAGCCTTCTAGCAAGCCTAGTCACGTTATAACTTCAAATTTAGCCTAGTCACGTTATAACTTCAAATTTAGACTAGTCACGTTATAACTTCAAATTTAGACTAGTCACGTTATAACTTCAAATTTAGACTAGTCACGTTATAACTCCAAATTTAGACTAGTCACGTTATAACTCCAAATTTAGACTAGGCCCCTCTCTAACAAGGCCTAGTCTAAATAGTCTAGGTACGAGTTAGGTTACTTTCTTGATCTCGTCGAGTGAGATTAATCAAGATACACCTAATTACAAAGGTTTCAATCTACCTAACTTCAAATTTAGACTAGGCCTCTCTAGCAAGGCCTAGTCTAAATAGTCTAGGTGATCTCGTCGAGTGAGATTAATCAAGATACAAGTAACTATAACTACAAATGTTTCAATCTATCGTTTATAAGTTATTACTTCAAATTTAGACTAGGTCTCTCTAGCAAGGCCTAGTCTAAATTAGTTGAGGTACGAGTAAGTAGGAATGTTTCGTCTATAAGTTATAACTTCAAATTTAAACTAGCCTCTCTTGTGGGGCGGGCCTAGTCTAAATTAGTCGAGGTACAAGTTATAGGGTTACTTGATCTCGTCGAGTGAGATTAGTCGAGTTACGAATAACTACAAATGTTACAATCTACCGTCCATAAGTTATAACTTCAAATTTAGAACTAGGCCTCTTTAGCAGGGCGCTCGGGCACTTAGCATAACTCGGAGAAACTTCATATAGAACTTGACCAATTGAATCATTTTCATTTCAGGAAACAGAAGCCACGAAGGAGAAACTGTTGATCTTGAAGCAGAAAAAGTTGACCCTTTTGGCTGAAGTTCGGTATAGTTTAGAACCATTCTTCTCCTTTGATGTTGAATTTCTGTGAGGAATCTGTTAATGTTGTGAATTGAGCCATGTTTATTTCCATTCTCCTTTAGCTTTTTGAGGCATAAATATGAACTCTTGAAGAACCACCCTGAAACTCAACCAAAGCTTGGTTTCAAGCTGCCACAGAACCTTAAAATCCGACCTCCCGTCTCAAAGAAAGAAAATCGTTCTCAAAAAAGAGAAGCTCGTAACTTAAACCGAAGGGGAGGAATCTCCGATGGGACGGAAGCCACCACTCGAAAAGCTCGGTTGGTTTGCGACGTAAACCAGAAGTCAAGGATGTGCAGCAAGAAGGAAATGAATGTACTCCATTATTTTCCTGTTGTTAGCCAGAAAGAGAGAGTATACAGAGCACATGAAGTTGCTACCAATACGAACATGACCCCGGTGTTCGATCTTAACCAGATCTCGGTACCTATGATGACTCCGAATCTTGCTTCTTATAGTTTAATACATTTGCTATCAGTTCTTTAACATATGTTTCTTGCTTCAGAGGGAGGAAGAAGAATTGCAGGCGGGTTTCGAACCACTAAGAACGGCGGACGACGACGAGCTGAAGAATATCTGTTCGAGAAGCGAAGTCGATGCGAAGAACAGTGACTTGATGGTGTCGTCGATGTGTAGGAATGTTGGCAATGGATCAAACAGAGCAGGAAAAAGGAAGATCTCATGGCAAGACCGAGTGGCATTAAGAGCTTGAAATTCTCTCATCATTTGCCTATGTGGGCAAACTGGGCTTCCTTAAAATTCCATTGTTATTATTATTTTATATAGTTCTCTCACTCGGCTCGAGAAAATTATGACCCTATAACGTTTGTCAATAGAAAGTTCGATAAGGTTCTTAGGAACGACTTTCTAAGTGCTTAAGAAGAGTTTTTAAGTATTAGAAAGAAACTCTTAAGCACGTGGAAAGTCATTCCGAATGTACCTTATTTTTGAAGTATATCTAACGTCGCAAGTTTGGGTTATCATCAAAATTGTGATCTTAATGATGTGTAAATTACGATTTTTTTCATCTTAGGAACTTGGAACGTTGATAGCGGTGGG

mRNA sequence

ATGATCGGAATCAATCATACAGGTCTCTTGCAGGATTACGCAGAGCTGCACAATGAAACAGAAGCCACGAAGGAGAAACTGTTGATCTTGAAGCAGAAAAAGTTGACCCTTTTGGCTGAAGTTCGGTATAGTTTAGAACCATTCTTCTCCTTTGATGTTGAATTTCTCTTTTTGAGGCATAAATATGAACTCTTGAAGAACCACCCTGAAACTCAACCAAAGCTTGGTTTCAAGCTGCCACAGAACCTTAAAATCCGACCTCCCGTCTCAAAGAAAGAAAATCGTTCTCAAAAAAGAGAAGCTCGTAACTTAAACCGAAGGGGAGGAATCTCCGATGGGACGGAAGCCACCACTCGAAAAGCTCGGTTGGTTTGCGACGTAAACCAGAAGTCAAGGATGTGCAGCAAGAAGGAAATGAATGTACTCCATTATTTTCCTGTTGTTAGCCAGAAAGAGAGAGTATACAGAGCACATGAAGTTGCTACCAATACGAACATGACCCCGGTGTTCGATCTTAACCAGATCTCGGTACCTATGATGACTCCGAATCTTGCTTCTTATAGTTTAATACATTTGCTATCAAGGGAGGAAGAAGAATTGCAGGCGGGTTTCGAACCACTAAGAACGGCGGACGACGACGAGCTGAAGAATATCTGTTCGAGAAGCGAAGTCGATGCGAAGAACAGTGACTTGATGGTGTCGTCGATGTGTAGGAATGTTGGCAATGGATCAAACAGAGCAGGAAAAAGGAAGATCTCATGGCAAGACCGAGTGGCATTAAGAGCTTGAAATTCTCTCATCATTTGCCTATGTGGGCAAACTGGGCTTCCTTAAAATTCCATTGTTATTATTATTTTATATAGTTCTCTCACTCGGCTCGAGAAAATTATGACCCTATAACGTTTGTCAATAGAAAGTTCGATAAGGTTCTTAGGAACGACTTTCTAAGTGCTTAAGAAGAGTTTTTAAGTATTAGAAAGAAACTCTTAAGCACGTGGAAAGTCATTCCGAATGTACCTTATTTTTGAAGTATATCTAACGTCGCAAGTTTGGGTTATCATCAAAATTGTGATCTTAATGATGTGTAAATTACGATTTTTTTCATCTTAGGAACTTGGAACGTTGATAGCGGTGGG

Coding sequence (CDS)

ATGATCGGAATCAATCATACAGGTCTCTTGCAGGATTACGCAGAGCTGCACAATGAAACAGAAGCCACGAAGGAGAAACTGTTGATCTTGAAGCAGAAAAAGTTGACCCTTTTGGCTGAAGTTCGGTATAGTTTAGAACCATTCTTCTCCTTTGATGTTGAATTTCTCTTTTTGAGGCATAAATATGAACTCTTGAAGAACCACCCTGAAACTCAACCAAAGCTTGGTTTCAAGCTGCCACAGAACCTTAAAATCCGACCTCCCGTCTCAAAGAAAGAAAATCGTTCTCAAAAAAGAGAAGCTCGTAACTTAAACCGAAGGGGAGGAATCTCCGATGGGACGGAAGCCACCACTCGAAAAGCTCGGTTGGTTTGCGACGTAAACCAGAAGTCAAGGATGTGCAGCAAGAAGGAAATGAATGTACTCCATTATTTTCCTGTTGTTAGCCAGAAAGAGAGAGTATACAGAGCACATGAAGTTGCTACCAATACGAACATGACCCCGGTGTTCGATCTTAACCAGATCTCGGTACCTATGATGACTCCGAATCTTGCTTCTTATAGTTTAATACATTTGCTATCAAGGGAGGAAGAAGAATTGCAGGCGGGTTTCGAACCACTAAGAACGGCGGACGACGACGAGCTGAAGAATATCTGTTCGAGAAGCGAAGTCGATGCGAAGAACAGTGACTTGATGGTGTCGTCGATGTGTAGGAATGTTGGCAATGGATCAAACAGAGCAGGAAAAAGGAAGATCTCATGGCAAGACCGAGTGGCATTAAGAGCTTGA

Protein sequence

MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRHKYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRKARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISVPMMTPNLASYSLIHLLSREEEELQAGFEPLRTADDDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Homology
BLAST of CmoCh05G010460 vs. ExPASy TrEMBL
Match: A0A6J1G446 (uncharacterized protein LOC111450577 OS=Cucurbita moschata OX=3662 GN=LOC111450577 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.0e-116
Identity = 230/262 (87.79%), Postives = 230/262 (87.79%), Query Frame = 0

Query: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRH 60
           MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVR              FLRH
Sbjct: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVR--------------FLRH 60

Query: 61  KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRK 120
           KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRK
Sbjct: 61  KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRK 120

Query: 121 ARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISVPMM 180
           ARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQI     
Sbjct: 121 ARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQI----- 180

Query: 181 TPNLASYSLIHLLSREEEELQAGFEPLRTADDDELKNICSRSEVDAKNSDLMVSSMCRNV 240
                        SREEEELQAGFEPLRTADDDELKNICSRSEVDAKNSDLMVSSMCRNV
Sbjct: 181 -------------SREEEELQAGFEPLRTADDDELKNICSRSEVDAKNSDLMVSSMCRNV 230

Query: 241 GNGSNRAGKRKISWQDRVALRA 263
           GNGSNRAGKRKISWQDRVALRA
Sbjct: 241 GNGSNRAGKRKISWQDRVALRA 230

BLAST of CmoCh05G010460 vs. ExPASy TrEMBL
Match: A0A6J1KKM1 (uncharacterized protein LOC111494012 OS=Cucurbita maxima OX=3661 GN=LOC111494012 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.4e-104
Identity = 210/263 (79.85%), Postives = 220/263 (83.65%), Query Frame = 0

Query: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRH 60
           MI INH  LLQDYAEL NETEA KEKLLILKQKK TLLAEVR              FLRH
Sbjct: 1   MIRINHPPLLQDYAELQNETEAMKEKLLILKQKKSTLLAEVR--------------FLRH 60

Query: 61  KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRK 120
           KYELLKNHPETQPK+GFKLPQNLKIRPPVSKKENRS+KREARNLN+RGGISDG EATTRK
Sbjct: 61  KYELLKNHPETQPKVGFKLPQNLKIRPPVSKKENRSRKREARNLNQRGGISDGMEATTRK 120

Query: 121 ARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISVPMM 180
           AR VC+VNQKSRMCSKKEM++LHYFP++SQKERVYRAHEVATNTNMTPVFDLNQI     
Sbjct: 121 ARSVCNVNQKSRMCSKKEMSILHYFPIISQKERVYRAHEVATNTNMTPVFDLNQI----- 180

Query: 181 TPNLASYSLIHLLSREEEELQAGFEPLRTADD-DELKNICSRSEVDAKNSDLMVSSMCRN 240
                        SREEEELQ GFEP+RT D+ DELKNICSRSEVDAKNSDLMVSSMCRN
Sbjct: 181 -------------SREEEELQVGFEPIRTEDENDELKNICSRSEVDAKNSDLMVSSMCRN 231

Query: 241 VGNGSNRAGKRKISWQDRVALRA 263
           VGNGSNRAGKRKISWQDRVALRA
Sbjct: 241 VGNGSNRAGKRKISWQDRVALRA 231

BLAST of CmoCh05G010460 vs. ExPASy TrEMBL
Match: A0A5A7URJ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00350 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.9e-71
Identity = 163/271 (60.15%), Postives = 189/271 (69.74%), Query Frame = 0

Query: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRH 60
           M+GI H  LLQDY ELHNETEA K+KLLI K+KK TLL EVR              FLRH
Sbjct: 22  MVGIKHQSLLQDYQELHNETEAVKKKLLIAKRKKATLLDEVR--------------FLRH 81

Query: 61  KYELLKNHP-ETQPKLGFKLPQNLKIRPPVSKKENRSQKRE--------ARNLNRRGGIS 120
           +YELLKN P   QPK+GFKL +NL++RPP+ KKE  S+KRE        A +LN+RGGI 
Sbjct: 82  RYELLKNQPANIQPKVGFKLSRNLELRPPIVKKEKSSRKREASLKPLAQAHDLNQRGGIY 141

Query: 121 DGTEATTRKARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFD 180
           +G EA++RK++   D+NQKS  CSKKE+ + + FP   QKERVYRAHE A N NMTPVFD
Sbjct: 142 NGIEASSRKSQSFFDLNQKSNTCSKKEVIMNNSFPTFDQKERVYRAHEAAANRNMTPVFD 201

Query: 181 LNQISVPMMTPNLASYSLIHLLSREEEELQAGFEPLRTADDDELKNICSRSEVDAKNSDL 240
           LNQI                  SREEEE+QAGFEPLR   +DE KNI  RSE DAKNSDL
Sbjct: 202 LNQI------------------SREEEEMQAGFEPLRQL-EDESKNIFPRSEHDAKNSDL 259

Query: 241 MVSSMCRNVGNGSNRAGKRKISWQDRVALRA 263
           ++SSMCRN  NGSNRAGKRKISWQD+VALRA
Sbjct: 262 VLSSMCRNDDNGSNRAGKRKISWQDQVALRA 259

BLAST of CmoCh05G010460 vs. ExPASy TrEMBL
Match: A0A1S3BVT4 (uncharacterized protein LOC103493683 OS=Cucumis melo OX=3656 GN=LOC103493683 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.9e-71
Identity = 163/271 (60.15%), Postives = 189/271 (69.74%), Query Frame = 0

Query: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRH 60
           M+GI H  LLQDY ELHNETEA K+KLLI K+KK TLL EVR              FLRH
Sbjct: 22  MVGIKHQSLLQDYQELHNETEAVKKKLLIAKRKKATLLDEVR--------------FLRH 81

Query: 61  KYELLKNHP-ETQPKLGFKLPQNLKIRPPVSKKENRSQKRE--------ARNLNRRGGIS 120
           +YELLKN P   QPK+GFKL +NL++RPP+ KKE  S+KRE        A +LN+RGGI 
Sbjct: 82  RYELLKNQPANIQPKVGFKLSRNLELRPPIVKKEKSSRKREASLKPLAQAHDLNQRGGIY 141

Query: 121 DGTEATTRKARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFD 180
           +G EA++RK++   D+NQKS  CSKKE+ + + FP   QKERVYRAHE A N NMTPVFD
Sbjct: 142 NGIEASSRKSQSFFDLNQKSNTCSKKEVIMNNSFPTFDQKERVYRAHEAAANRNMTPVFD 201

Query: 181 LNQISVPMMTPNLASYSLIHLLSREEEELQAGFEPLRTADDDELKNICSRSEVDAKNSDL 240
           LNQI                  SREEEE+QAGFEPLR   +DE KNI  RSE DAKNSDL
Sbjct: 202 LNQI------------------SREEEEMQAGFEPLRQL-EDESKNIFPRSEHDAKNSDL 259

Query: 241 MVSSMCRNVGNGSNRAGKRKISWQDRVALRA 263
           ++SSMCRN  NGSNRAGKRKISWQD+VALRA
Sbjct: 262 VLSSMCRNDDNGSNRAGKRKISWQDQVALRA 259

BLAST of CmoCh05G010460 vs. ExPASy TrEMBL
Match: A0A0A0LH29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035530 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.8e-68
Identity = 159/271 (58.67%), Postives = 186/271 (68.63%), Query Frame = 0

Query: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRH 60
           M+GI H  LLQDY ELHNETEA K+KLLI K+KK TLL EVR              FLRH
Sbjct: 22  MVGIKHQSLLQDYEELHNETEAMKKKLLIAKRKKETLLDEVR--------------FLRH 81

Query: 61  KYELLKNHP-ETQPKLGFKLPQNLKIRPPVSKKENRSQKRE--------ARNLNRRGGIS 120
           +YELLK  P   QPK+GFK P+NL+++PP  KKE  S+KRE        A ++N+RGGI 
Sbjct: 82  RYELLKKQPANIQPKVGFKRPRNLELKPPTVKKEKSSRKREASLKPLAQAHDVNQRGGIY 141

Query: 121 DGTEATTRKARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFD 180
           +G EA++RK++   D+NQKS  CSKKE+ V   FP   QKERVYRAHE A N NMTPVFD
Sbjct: 142 NGVEASSRKSQSFFDLNQKSNTCSKKEVIVNSSFPTFDQKERVYRAHEAAANRNMTPVFD 201

Query: 181 LNQISVPMMTPNLASYSLIHLLSREEEELQAGFEPLRTADDDELKNICSRSEVDAKNSDL 240
           LNQI                  SREEEELQAGF+P+R   +DE KNI  RSE DAKNS+L
Sbjct: 202 LNQI------------------SREEEELQAGFKPVRL--EDEPKNIFPRSEHDAKNSEL 258

Query: 241 MVSSMCRNVGNGSNRAGKRKISWQDRVALRA 263
           ++SSMCRN  NGSNRAGKRKISWQD+VALRA
Sbjct: 262 VLSSMCRNDDNGSNRAGKRKISWQDQVALRA 258

BLAST of CmoCh05G010460 vs. NCBI nr
Match: XP_022946544.1 (uncharacterized protein LOC111450577 [Cucurbita moschata])

HSP 1 Score: 427.9 bits (1099), Expect = 6.1e-116
Identity = 230/262 (87.79%), Postives = 230/262 (87.79%), Query Frame = 0

Query: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRH 60
           MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVR              FLRH
Sbjct: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVR--------------FLRH 60

Query: 61  KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRK 120
           KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRK
Sbjct: 61  KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRK 120

Query: 121 ARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISVPMM 180
           ARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQI     
Sbjct: 121 ARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQI----- 180

Query: 181 TPNLASYSLIHLLSREEEELQAGFEPLRTADDDELKNICSRSEVDAKNSDLMVSSMCRNV 240
                        SREEEELQAGFEPLRTADDDELKNICSRSEVDAKNSDLMVSSMCRNV
Sbjct: 181 -------------SREEEELQAGFEPLRTADDDELKNICSRSEVDAKNSDLMVSSMCRNV 230

Query: 241 GNGSNRAGKRKISWQDRVALRA 263
           GNGSNRAGKRKISWQDRVALRA
Sbjct: 241 GNGSNRAGKRKISWQDRVALRA 230

BLAST of CmoCh05G010460 vs. NCBI nr
Match: KAG7030088.1 (hypothetical protein SDJN02_08435 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401.4 bits (1030), Expect = 6.1e-108
Identity = 218/265 (82.26%), Postives = 224/265 (84.53%), Query Frame = 0

Query: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRH 60
           MIGINH GLLQDYA+LHNETEA KEKLLIL QKK TLLAEVR              FLRH
Sbjct: 1   MIGINHPGLLQDYAQLHNETEAMKEKLLILNQKKSTLLAEVR--------------FLRH 60

Query: 61  KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRK 120
           KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRS+KREARNLN+RGGISDGTEATTRK
Sbjct: 61  KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSRKREARNLNQRGGISDGTEATTRK 120

Query: 121 ARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISVPMM 180
           AR VCDVNQKSRMCSKKEM+VLHYFP+VSQKERVYRAHEVATNTNMTPVFDLNQI     
Sbjct: 121 ARSVCDVNQKSRMCSKKEMSVLHYFPIVSQKERVYRAHEVATNTNMTPVFDLNQI----- 180

Query: 181 TPNLASYSLIHLLSREEEELQAGFEPLRTADD---DELKNICSRSEVDAKNSDLMVSSMC 240
                        SREEEELQAGFEPLRT +D   DELKNICSRSEVDAKNSDLMVSSMC
Sbjct: 181 -------------SREEEELQAGFEPLRTEEDDDNDELKNICSRSEVDAKNSDLMVSSMC 233

Query: 241 RNVGNGSNRAGKRKISWQDRVALRA 263
           RNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 241 RNVGNGSNRAGKRKISWQDRVALRA 233

BLAST of CmoCh05G010460 vs. NCBI nr
Match: XP_023546781.1 (uncharacterized protein LOC111805783 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400.2 bits (1027), Expect = 1.4e-107
Identity = 217/263 (82.51%), Postives = 221/263 (84.03%), Query Frame = 0

Query: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRH 60
           MIGINH GLLQDYAELHNETEA KEKLLILKQKK TLLAEVR              FLRH
Sbjct: 1   MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVR--------------FLRH 60

Query: 61  KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRK 120
           KYELLKNHPETQPK GFKLPQNLKIRPPVSKKENRS+KREARNLNRRGGISDGTEATTRK
Sbjct: 61  KYELLKNHPETQPKAGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRK 120

Query: 121 ARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISVPMM 180
           AR VCDVNQKSRMCSKKEM++LHYFP+VSQKERVYRAHEVA NTNMTPVFDLNQI     
Sbjct: 121 ARSVCDVNQKSRMCSKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQI----- 180

Query: 181 TPNLASYSLIHLLSREEEELQAGFEPLRTA-DDDELKNICSRSEVDAKNSDLMVSSMCRN 240
                        SREEEELQ GFEPLR   DDDELKNICSRSEVDAKNSDLMVSSMCRN
Sbjct: 181 -------------SREEEELQVGFEPLRKEDDDDELKNICSRSEVDAKNSDLMVSSMCRN 231

Query: 241 VGNGSNRAGKRKISWQDRVALRA 263
           VGNGSNRAGKRKISWQDRVALRA
Sbjct: 241 VGNGSNRAGKRKISWQDRVALRA 231

BLAST of CmoCh05G010460 vs. NCBI nr
Match: XP_022999758.1 (uncharacterized protein LOC111494012 [Cucurbita maxima])

HSP 1 Score: 387.5 bits (994), Expect = 9.2e-104
Identity = 210/263 (79.85%), Postives = 220/263 (83.65%), Query Frame = 0

Query: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRH 60
           MI INH  LLQDYAEL NETEA KEKLLILKQKK TLLAEVR              FLRH
Sbjct: 1   MIRINHPPLLQDYAELQNETEAMKEKLLILKQKKSTLLAEVR--------------FLRH 60

Query: 61  KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRK 120
           KYELLKNHPETQPK+GFKLPQNLKIRPPVSKKENRS+KREARNLN+RGGISDG EATTRK
Sbjct: 61  KYELLKNHPETQPKVGFKLPQNLKIRPPVSKKENRSRKREARNLNQRGGISDGMEATTRK 120

Query: 121 ARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISVPMM 180
           AR VC+VNQKSRMCSKKEM++LHYFP++SQKERVYRAHEVATNTNMTPVFDLNQI     
Sbjct: 121 ARSVCNVNQKSRMCSKKEMSILHYFPIISQKERVYRAHEVATNTNMTPVFDLNQI----- 180

Query: 181 TPNLASYSLIHLLSREEEELQAGFEPLRTADD-DELKNICSRSEVDAKNSDLMVSSMCRN 240
                        SREEEELQ GFEP+RT D+ DELKNICSRSEVDAKNSDLMVSSMCRN
Sbjct: 181 -------------SREEEELQVGFEPIRTEDENDELKNICSRSEVDAKNSDLMVSSMCRN 231

Query: 241 VGNGSNRAGKRKISWQDRVALRA 263
           VGNGSNRAGKRKISWQDRVALRA
Sbjct: 241 VGNGSNRAGKRKISWQDRVALRA 231

BLAST of CmoCh05G010460 vs. NCBI nr
Match: KAG6599145.1 (Signal recognition particle receptor subunit alpha-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 356.7 bits (914), Expect = 1.7e-94
Identity = 195/243 (80.25%), Postives = 202/243 (83.13%), Query Frame = 0

Query: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRH 60
           MI INH GLLQDYA+LHNETEA KEKLLILKQKK TLLAEVR              FLRH
Sbjct: 1   MIEINHPGLLQDYAQLHNETEAMKEKLLILKQKKSTLLAEVR--------------FLRH 60

Query: 61  KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRK 120
           KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRS+KREARNLN+RGGISDGTEATTRK
Sbjct: 61  KYELLKNHPETQPKLGFKLPQNLKIRPPVSKKENRSRKREARNLNQRGGISDGTEATTRK 120

Query: 121 ARLVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISVPMM 180
           AR VCDVNQKSRMCSKKEM+VLHYFP+VSQKERVYRAHEVATNTNMTPVFDLNQI     
Sbjct: 121 ARSVCDVNQKSRMCSKKEMSVLHYFPIVSQKERVYRAHEVATNTNMTPVFDLNQI----- 180

Query: 181 TPNLASYSLIHLLSREEEELQAGFEPLRTADD---DELKNICSRSEVDAKNSDLMVSSMC 240
                        SREEEELQAGFEPLRT +D   DELKNICSRSEVDAKNSDLMVSSMC
Sbjct: 181 -------------SREEEELQAGFEPLRTEEDDDNDELKNICSRSEVDAKNSDLMVSSMC 211

BLAST of CmoCh05G010460 vs. TAIR 10
Match: AT4G30630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-07
Identity = 76/261 (29.12%), Postives = 115/261 (44.06%), Query Frame = 0

Query: 15  ELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRHKYELLKNHP--ETQ 74
           EL  E E  +++L ++KQK+LTL +EVR              FLR +YE LK     ET 
Sbjct: 26  ELEKELEIKRKRLEMIKQKRLTLKSEVR--------------FLRRRYEHLKQDQTLETS 85

Query: 75  PKL-------GFKLPQNLKIRPPVSKKENRSQKREA---RNLNRRGGISDGTEATTRKAR 134
           P++       G ++P     R P  +++ +S  R +    +L  +  I +  EA      
Sbjct: 86  PEMLRLSESGGLEVP-----RKPSGERKKQSGVRASVPCFDLKLKNTICNEKEALANNV- 145

Query: 135 LVCDVNQKSRMCSKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISVPMMTP 194
             CD+++K +     ++     FPV              + T+  P FDLNQI       
Sbjct: 146 ASCDLDKKRKRSRGSDVLT---FPVSLPD---LNGEGNTSGTDKVPGFDLNQI------- 205

Query: 195 NLASYSLIHLLSREEEELQAGFEPLRTADDDELKNICSRSEVDAKNSDLMVS---SMCRN 254
                      SREEEE +   E +     + +KN    + +D + SDL V     +C +
Sbjct: 206 -----------SREEEEPEVNGEHMVA---EAMKN----AMLDNRISDLHVERKLPICGD 235

Query: 255 VGNGSNRAGKRKISWQDRVAL 261
           V    NRA KRK++WQD VAL
Sbjct: 266 VEKELNRAVKRKVTWQDPVAL 235

BLAST of CmoCh05G010460 vs. TAIR 10
Match: AT5G57910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 7.2e-06
Identity = 40/133 (30.08%), Postives = 64/133 (48.12%), Query Frame = 0

Query: 2   IGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRYSLEPFFSFDVEFLFLRHK 61
           +   H  L+QDY ELH ETEA +++L  ++++K TL+AEVR              FLR +
Sbjct: 21  VRFRHHSLMQDYGELHMETEAMRKRLQAVRERKATLMAEVR--------------FLRRR 80

Query: 62  YELLKNHPETQPKLGFKLPQNLKIR---PPVSKKENRSQKREARNLNRRGGISDGTEATT 121
           Y  L+     + K   +     KIR    P +K E  ++     +LN      D T+ + 
Sbjct: 81  YRHLRQDQPQEIKKVRRSNGGKKIRVEVSPSNKSEAETKHVSLPDLNHSEKAHDETKTSP 139

Query: 122 RKARLVCDVNQKS 132
           ++   + D+NQ S
Sbjct: 141 KRRVPLFDLNQIS 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1G4463.0e-11687.79uncharacterized protein LOC111450577 OS=Cucurbita moschata OX=3662 GN=LOC1114505... [more]
A0A6J1KKM14.4e-10479.85uncharacterized protein LOC111494012 OS=Cucurbita maxima OX=3661 GN=LOC111494012... [more]
A0A5A7URJ02.9e-7160.15Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BVT42.9e-7160.15uncharacterized protein LOC103493683 OS=Cucumis melo OX=3656 GN=LOC103493683 PE=... [more]
A0A0A0LH291.8e-6858.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035530 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022946544.16.1e-11687.79uncharacterized protein LOC111450577 [Cucurbita moschata][more]
KAG7030088.16.1e-10882.26hypothetical protein SDJN02_08435 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023546781.11.4e-10782.51uncharacterized protein LOC111805783 [Cucurbita pepo subsp. pepo][more]
XP_022999758.19.2e-10479.85uncharacterized protein LOC111494012 [Cucurbita maxima][more]
KAG6599145.11.7e-9480.25Signal recognition particle receptor subunit alpha-like protein, partial [Cucurb... [more]
Match NameE-valueIdentityDescription
AT4G30630.11.3e-0729.12unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G57910.17.2e-0630.08unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..115
NoneNo IPR availablePANTHERPTHR34807OS08G0270800 PROTEINcoord: 55..262
coord: 5..43
NoneNo IPR availablePANTHERPTHR34807:SF3OS08G0270800 PROTEINcoord: 5..43
NoneNo IPR availablePANTHERPTHR34807:SF3OS08G0270800 PROTEINcoord: 55..262

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G010460.1CmoCh05G010460.1mRNA