CmoCh05G009830 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G009830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	increased DNA methylation 3-like
Location	Cmo_Chr05: 7919735 .. 7920554 (+)
RNA-Seq Expression	CmoCh05G009830
Synteny	CmoCh05G009830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATGGAAGGCCATGGCGATCAGACGAGGCTCAAACCATCAGTTATTTTAACTGGAACAGCCAATGAAGGTAGCTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAGTGAAGGTGCATACCTCTTCCGCGTTGCAATGCCTGGTGTACGAAAGGATCCAAGTAAGCTCCTTGTTTTGCCTTTATTTTTCTATCATTCTAACATTTGCATAGATCCCATCCTGATTATACCTCAGAAACGTTAATCCCGGACCGATCCATTTAGAGCAATAACTCGTTGGTCAAATCTCTAGGTAAGGTAAAATTTGAGATCAAAAGGGATGGTAAGGTTCAGATTGAAGGAGTGATGGCAGGTCCAGGCCTCTTAAAAGAATCATCAGCTATGTACGAGATGAAAGTCCAGCAACTGTGTCCTCCGGGACCTCTCACGGTTTCTTTTAAGCTGCCTGGACCAGTCGATCCACGGTTGTCGTCTCCTAGTTTCCGGGCTGATGGTATTCTGGAAGTGGTGGTTATGAAGTCTAAAGCACCTCCAACAGTGTCTGATTCCTACCCACCATTGTGATGAGTATGATGGAGAGAGGTATCTGGTTTTGCTGTCTCCTTTTGTTCTTCATTACTAGGCACTTGAATTACCCAAAGACACAAAAATGATGATGAAAAAGTTTCACTAAGAATAGTGTATTTAGAGTTTTCTATGTTAACTATTTCTTTTCATATGAAGTAGGGTTTTTAAATCACTTGCAATGTAATTTAATCCATAGTTTTGCCCATTTAAAGTCTACTCTTTTTTACTTGATAGTAGCTTTTATC

mRNA sequence

ATGGACATGGAAGGCCATGGCGATCAGACGAGGCTCAAACCATCAGTTATTTTAACTGGAACAGCCAATGAAGGTAGCTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAGTGAAGGTGCATACCTCTTCCGCGTTGCAATGCCTGGTGTACGAAAGGATCCAAGTAAGGTAAAATTTGAGATCAAAAGGGATGGTAAGGTTCAGATTGAAGGAGTGATGGCAGGTCCAGGCCTCTTAAAAGAATCATCAGCTATGTACGAGATGAAAGTCCAGCAACTGTGTCCTCCGGGACCTCTCACGGTTTCTTTTAAGCTGCCTGGACCAGTCGATCCACGGTTGTCGTCTCCTAGTTTCCGGGCTGATGGTATTCTGGAAGTGGTGGTTATGAAGTCTAAAGCACCTCCAACAGTGTCTGATTCCTACCCACCATTGTGATGAGTATGATGGAGAGAGGTATCTGGTTTTGCTGTCTCCTTTTGTTCTTCATTACTAGGCACTTGAATTACCCAAAGACACAAAAATGATGATGAAAAAGTTTCACTAAGAATAGTGTATTTAGAGTTTTCTATGTTAACTATTTCTTTTCATATGAAGTAGGGTTTTTAAATCACTTGCAATGTAATTTAATCCATAGTTTTGCCCATTTAAAGTCTACTCTTTTTTACTTGATAGTAGCTTTTATC

Coding sequence (CDS)

ATGGACATGGAAGGCCATGGCGATCAGACGAGGCTCAAACCATCAGTTATTTTAACTGGAACAGCCAATGAAGGTAGCTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAGTGAAGGTGCATACCTCTTCCGCGTTGCAATGCCTGGTGTACGAAAGGATCCAAGTAAGGTAAAATTTGAGATCAAAAGGGATGGTAAGGTTCAGATTGAAGGAGTGATGGCAGGTCCAGGCCTCTTAAAAGAATCATCAGCTATGTACGAGATGAAAGTCCAGCAACTGTGTCCTCCGGGACCTCTCACGGTTTCTTTTAAGCTGCCTGGACCAGTCGATCCACGGTTGTCGTCTCCTAGTTTCCGGGCTGATGGTATTCTGGAAGTGGTGGTTATGAAGTCTAAAGCACCTCCAACAGTGTCTGATTCCTACCCACCATTGTGA

Protein sequence

MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL

Homology

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BLAST of CmoCh05G009830 vs. ExPASy Swiss-Prot
Match: Q9SYQ0 (Increased DNA methylation 3 OS=Arabidopsis thaliana OX=3702 GN=IDM3 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-30
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 0


Query: 13  KPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIE 72
           +PSV+ TGTA++ + G  +G+VDIGV++ AY F+VA+PGVRKD  +   EI+ DGKV +E
Sbjct: 339 EPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILE 398

Query: 73  G-VMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRADGILEVVVM 132
           G    G   +K  S ++EM +++LCPPGP  + F LPGPVDPRL SP+FR+DGI E V++
Sbjct: 399 GSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVII 458

Query: 133 KSK 135
           + K
Sbjct: 459 RHK 461

[Close]

BLAST of CmoCh05G009830 vs. ExPASy Swiss-Prot
Match: Q84K79 (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana OX=3702 GN=ACD22.3 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.7e-22
Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 10  TRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKV 69
           ++ K  V LTG+A  G  G  IGLVDI  SE +Y FRVA+PGV +D  +   EI+ DGK+
Sbjct: 78  SQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKEFSCEIEPDGKI 137

Query: 70  QIEG-VMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRADGILEV 129
            I+G    G   + + + +++M  Q LCPPG  T++F+LPGPV     + +F +DG+LE 
Sbjct: 138 MIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEFNGNFGSDGVLEG 197

Query: 130 VVMK 133
           VV K
Sbjct: 198 VVKK 201

[Close]

BLAST of CmoCh05G009830 vs. ExPASy Swiss-Prot
Match: Q8RWL4 (Increased DNA methylation 2 OS=Arabidopsis thaliana OX=3702 GN=IDM2 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-21
Identity = 59/136 (43.38%), Postives = 80/136 (58.82%), Query Frame = 0


Query: 5   GHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIK 64
           G       KP V      +E   G  +GL+DIG  + AYLFRV++PGV++D      E++
Sbjct: 219 GEESDVAAKPEV-----KSEAHGGLMVGLMDIGECDDAYLFRVSLPGVKRDERYFSCEVE 278

Query: 65  RDGKVQIEGV-MAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRAD 124
            +GKV + GV   G   +K  S ++EM+ + LCPPG  +VSF+LPGPV P   S +F  D
Sbjct: 279 DNGKVLVRGVTTTGGKRVKRYSHVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTD 338

Query: 125 GILEVVVMKSKAPPTV 140
           GILE VVMK+    TV
Sbjct: 339 GILEGVVMKNLQKQTV 349

[Close]

BLAST of CmoCh05G009830 vs. ExPASy TrEMBL
Match: A0A6J1G2H5 (increased DNA methylation 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450210 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 2.8e-76
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60
           MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK
Sbjct: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60

Query: 61  FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF 120
           FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF
Sbjct: 61  FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF 120

Query: 121 RADGILEVVVMKSKAPPTVSDSYPPL 147
           RADGILEVVVMKSKAPPTVSDSYPPL
Sbjct: 121 RADGILEVVVMKSKAPPTVSDSYPPL 146

[Close]

BLAST of CmoCh05G009830 vs. ExPASy TrEMBL
Match: A0A6J1KGJ6 (increased DNA methylation 3-like OS=Cucurbita maxima OX=3661 GN=LOC111494023 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.7e-76
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60
           MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK
Sbjct: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60

Query: 61  FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF 120
           FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLT+SFKLPGPVDPRLSSPSF
Sbjct: 61  FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSF 120

Query: 121 RADGILEVVVMKSKAPPTVSDSYPPL 147
           RADGILEVVVMKSKAPPTVSDSYPPL
Sbjct: 121 RADGILEVVVMKSKAPPTVSDSYPPL 146

[Close]

BLAST of CmoCh05G009830 vs. ExPASy TrEMBL
Match: A0A1S3CMV5 (increased DNA methylation 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502607 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.8e-66
Identity = 129/144 (89.58%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 3   MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFE 62
           MEG+GDQT LKPSVILTGTA EGSSGPPIGLVDIGVSEGAYLFRVA+PGVRKD SKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 63  IKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRA 122
           IK DGKVQIEGVM+GPG LKESSAMY+MKVQQLCPPGP TVSFKLPGPVDPRLSSPSFR 
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 123 DGILEVVVMKSKAPPTVSDSYPPL 147
           DGILEVVVMKS+A PTV+DS PPL
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPPL 144

[Close]

BLAST of CmoCh05G009830 vs. ExPASy TrEMBL
Match: A0A5D3CM92 (Increased DNA methylation 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00020 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.8e-66
Identity = 129/144 (89.58%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 3   MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFE 62
           MEG+GDQT LKPSVILTGTA EGSSGPPIGLVDIGVSEGAYLFRVA+PGVRKD SKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 63  IKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRA 122
           IK DGKVQIEGVM+GPG LKESSAMY+MKVQQLCPPGP TVSFKLPGPVDPRLSSPSFR 
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 123 DGILEVVVMKSKAPPTVSDSYPPL 147
           DGILEVVVMKS+A PTV+DS PPL
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPPL 144

[Close]

BLAST of CmoCh05G009830 vs. ExPASy TrEMBL
Match: A0A0A0KDF2 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G355370 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.8e-66
Identity = 129/144 (89.58%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 3   MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFE 62
           MEG+GDQT LKPSVILTGTA EGSSGPPIGLVDIGVSEGAYLFRVA+PGVRKD SKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 63  IKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRA 122
           IK DGKVQIEGVM+GPG LKESSAMY+MKVQQLCPPGP TVSFKLPGPVDPRLSSPSFR 
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 123 DGILEVVVMKSKAPPTVSDSYPPL 147
           DGILEVVVMKS+A PTV+DS PPL
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPPL 144

[Close]

BLAST of CmoCh05G009830 vs. NCBI nr
Match: XP_022945989.1 (increased DNA methylation 3-like [Cucurbita moschata] >XP_022945990.1 increased DNA methylation 3-like [Cucurbita moschata])

HSP 1 Score: 294.3 bits (752), Expect = 5.9e-76
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60
           MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK
Sbjct: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60

Query: 61  FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF 120
           FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF
Sbjct: 61  FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF 120

Query: 121 RADGILEVVVMKSKAPPTVSDSYPPL 147
           RADGILEVVVMKSKAPPTVSDSYPPL
Sbjct: 121 RADGILEVVVMKSKAPPTVSDSYPPL 146

[Close]

BLAST of CmoCh05G009830 vs. NCBI nr
Match: XP_022999775.1 (increased DNA methylation 3-like [Cucurbita maxima] >XP_022999776.1 increased DNA methylation 3-like [Cucurbita maxima])

HSP 1 Score: 293.9 bits (751), Expect = 7.7e-76
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60
           MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK
Sbjct: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60

Query: 61  FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF 120
           FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLT+SFKLPGPVDPRLSSPSF
Sbjct: 61  FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSF 120

Query: 121 RADGILEVVVMKSKAPPTVSDSYPPL 147
           RADGILEVVVMKSKAPPTVSDSYPPL
Sbjct: 121 RADGILEVVVMKSKAPPTVSDSYPPL 146

[Close]

BLAST of CmoCh05G009830 vs. NCBI nr
Match: XP_023546049.1 (increased DNA methylation 3-like [Cucurbita pepo subsp. pepo] >XP_023546050.1 increased DNA methylation 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60
           M+MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK
Sbjct: 1   MEMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60

Query: 61  FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF 120
           FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF
Sbjct: 61  FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF 120

Query: 121 RADGILEVVVMKSKAPPTVSDSYPPL 147
           RADGILEVVVMKSKAPPTVSDSYPPL
Sbjct: 121 RADGILEVVVMKSKAPPTVSDSYPPL 146

[Close]

BLAST of CmoCh05G009830 vs. NCBI nr
Match: KAG6599085.1 (Increased DNA methylation 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030022.1 Increased DNA methylation 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74
Identity = 143/146 (97.95%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60
           M+MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK
Sbjct: 1   MEMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60

Query: 61  FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF 120
           FEIKRDGKV+IEGVMAGPGLLK+SSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF
Sbjct: 61  FEIKRDGKVRIEGVMAGPGLLKDSSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSF 120

Query: 121 RADGILEVVVMKSKAPPTVSDSYPPL 147
           RADGILEVVVMKSKAPPTVSDSYPPL
Sbjct: 121 RADGILEVVVMKSKAPPTVSDSYPPL 146

[Close]

BLAST of CmoCh05G009830 vs. NCBI nr
Match: XP_008464812.1 (PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo] >XP_008464813.1 PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo] >XP_008464815.1 PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo] >KAA0045408.1 increased DNA methylation 3 isoform X2 [Cucumis melo var. makuwa] >TYK11329.1 increased DNA methylation 3 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65
Identity = 129/144 (89.58%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 3   MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFE 62
           MEG+GDQT LKPSVILTGTA EGSSGPPIGLVDIGVSEGAYLFRVA+PGVRKD SKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 63  IKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRA 122
           IK DGKVQIEGVM+GPG LKESSAMY+MKVQQLCPPGP TVSFKLPGPVDPRLSSPSFR 
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 123 DGILEVVVMKSKAPPTVSDSYPPL 147
           DGILEVVVMKS+A PTV+DS PPL
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPPL 144

[Close]

BLAST of CmoCh05G009830 vs. TAIR 10
Match: AT1G76440.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 1.7e-36
Identity = 70/117 (59.83%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 16  VILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVM 75
           V  TGTA  GS GPPIGLVDIGVSE AY+FRV++PG+ K+  K+K EI+R+G+V I+GV+
Sbjct: 19  VFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGRVCIQGVI 78

Query: 76  AGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRADGILEVVVMK 133
               +  ++  +Y M+VQQLCPPGP +++F LPG VDPRL SP+FR+DGI EVVV+K
Sbjct: 79  PEIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135

[Close]

BLAST of CmoCh05G009830 vs. TAIR 10
Match: AT1G76440.2 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 1.7e-36
Identity = 70/117 (59.83%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 16  VILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVM 75
           V  TGTA  GS GPPIGLVDIGVSE AY+FRV++PG+ K+  K+K EI+R+G+V I+GV+
Sbjct: 19  VFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGRVCIQGVI 78

Query: 76  AGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRADGILEVVVMK 133
               +  ++  +Y M+VQQLCPPGP +++F LPG VDPRL SP+FR+DGI EVVV+K
Sbjct: 79  PEIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135

[Close]

BLAST of CmoCh05G009830 vs. TAIR 10
Match: AT1G76440.3 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 1.7e-36
Identity = 70/117 (59.83%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 16  VILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVM 75
           V  TGTA  GS GPPIGLVDIGVSE AY+FRV++PG+ K+  K+K EI+R+G+V I+GV+
Sbjct: 19  VFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGRVCIQGVI 78

Query: 76  AGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRADGILEVVVMK 133
               +  ++  +Y M+VQQLCPPGP +++F LPG VDPRL SP+FR+DGI EVVV+K
Sbjct: 79  PEIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135

[Close]

BLAST of CmoCh05G009830 vs. TAIR 10
Match: AT1G20870.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 2.1e-31
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 0


Query: 13  KPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIE 72
           +PSV+ TGTA++ + G  +G+VDIGV++ AY F+VA+PGVRKD  +   EI+ DGKV +E
Sbjct: 339 EPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILE 398

Query: 73  G-VMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRADGILEVVVM 132
           G    G   +K  S ++EM +++LCPPGP  + F LPGPVDPRL SP+FR+DGI E V++
Sbjct: 399 GSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVII 458

Query: 133 KSK 135
           + K
Sbjct: 459 RHK 461

[Close]

BLAST of CmoCh05G009830 vs. TAIR 10
Match: AT1G54850.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 6.2e-23
Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 10  TRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKV 69
           ++ K  V LTG+A  G  G  IGLVDI  SE +Y FRVA+PGV +D  +   EI+ DGK+
Sbjct: 78  SQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKEFSCEIEPDGKI 137

Query: 70  QIEG-VMAGPGLLKESSAMYEMKVQQLCPPGPLTVSFKLPGPVDPRLSSPSFRADGILEV 129
            I+G    G   + + + +++M  Q LCPPG  T++F+LPGPV     + +F +DG+LE 
Sbjct: 138 MIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEFNGNFGSDGVLEG 197

Query: 130 VVMK 133
           VV K
Sbjct: 198 VVKK 201

The following BLAST results are available for this feature:

BLAST of CmoCh05G009830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYQ0	3.0e-30	52.03	Increased DNA methylation 3 OS=Arabidopsis thaliana OX=3702 GN=IDM3 PE=1 SV=1	[more]
Q84K79	8.7e-22	44.35	Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8RWL4	1.1e-21	43.38	Increased DNA methylation 2 OS=Arabidopsis thaliana OX=3702 GN=IDM2 PE=1 SV=1	[more]

BLAST of CmoCh05G009830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2H5	2.8e-76	100.00	increased DNA methylation 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450210 P...	[more]
A0A6J1KGJ6	3.7e-76	99.32	increased DNA methylation 3-like OS=Cucurbita maxima OX=3661 GN=LOC111494023 PE=...	[more]
A0A1S3CMV5	7.8e-66	89.58	increased DNA methylation 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502607 P...	[more]
A0A5D3CM92	7.8e-66	89.58	Increased DNA methylation 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KDF2	7.8e-66	89.58	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G355370 PE=3 S...	[more]

BLAST of CmoCh05G009830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945989.1	5.9e-76	100.00	increased DNA methylation 3-like [Cucurbita moschata] >XP_022945990.1 increased ...	[more]
XP_022999775.1	7.7e-76	99.32	increased DNA methylation 3-like [Cucurbita maxima] >XP_022999776.1 increased DN...	[more]
XP_023546049.1	1.7e-75	99.32	increased DNA methylation 3-like [Cucurbita pepo subsp. pepo] >XP_023546050.1 in...	[more]
KAG6599085.1	1.1e-74	97.95	Increased DNA methylation 3, partial [Cucurbita argyrosperma subsp. sororia] >KA...	[more]
XP_008464812.1	1.6e-65	89.58	PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo] >XP_008464813.1...	[more]

BLAST of CmoCh05G009830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76440.1	1.7e-36	59.83	HSP20-like chaperones superfamily protein	[more]
AT1G76440.2	1.7e-36	59.83	HSP20-like chaperones superfamily protein	[more]
AT1G76440.3	1.7e-36	59.83	HSP20-like chaperones superfamily protein	[more]
AT1G20870.1	2.1e-31	52.03	HSP20-like chaperones superfamily protein	[more]
AT1G54850.1	6.2e-23	44.35	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 33..142 e-value: 1.8E-10 score: 42.6
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 32..136
None	No IPR available	PANTHER	PTHR34661:SF2	INCREASED DNA METHYLATION 3-LIKE	coord: 1..138
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 35..132 e-value: 1.42998E-8 score: 47.1637
IPR039321	Increased DNA methylation 2/3-like	PANTHER	PTHR34661	INCREASED DNA METHYLATION 3	coord: 1..138
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 22..146 score: 11.455738

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G009830.1	CmoCh05G009830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901537	positive regulation of DNA demethylation
cellular_component	GO:0005634	nucleus