CmoCh05G009520 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G009520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	single-stranded DNA-binding protein WHY1, chloroplastic-like
Location	Cmo_Chr05: 7664738 .. 7668082 (-)
RNA-Seq Expression	CmoCh05G009520
Synteny	CmoCh05G009520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGCTCGCTAATTAAGAACATGGGCTTATAAATAGGGAGTACAGGAGCCTTATAAATAGGTTCACCTTTTACGCTTATCCATAGAACATTTTGGTTACGAGAGGATATAAAACTTTGTAGGGCCATGAGCTTTGGCGGTGAAAAAATGGTGCTCTAACTCCCGCCGGTTGTGTCTCTAATCCTCACCGCCATAGAATAGCTGCGAAGACGAAGCCGAAACCATGCTGCGTCTTCAATGCCTTTCTTCTTCATTGCTTCCGCCATTAATCCCCGAACTCTCGCCGGAAACCTCTTCGAACCGCCGACTATGTCGCCTCAACTCCTTTCGCCCACTCCTCACTCTCTCTACTACACCAAAATCTTCTCCAAAGTGCCAATACTCCTGGAACACGCAGCAGCATCAGGCGGCCTTCGAATCGGGCTTTCAGACAGATTCATTTTCCTCACAAACTCGCGCCGGAGGTACTTCTTTATTCCTTTCCTTTCAAGTTTTTTCGGGAAGAACTTCGTGTATCCTGTAGTATTGATGCTATTTGGAAATTTTGGTTCATGTTGGAAGGAAAATGTAGTATATAGCTCCGTTTGTGACTGATTTTGTTTAACCGTGGATGGATTGAATTATTATGACCTTGTTTTCTTTTTGTTTATCTCATATTCCTCAAATTTTACTGGATTACTTAGAAATGATTCAATTTCAAGGAGCTCTCCAAATCCAGGGGCATTTTTCTTGAAGTTCTTTGTTTATTCCTTGTTAGTTGTTTTGATTTCTCGGGTTCTGAAGTGTTTATGGTTTGGCTTGTTTGTAGCTGCTGCAGCATTGCCACCAAGGTTTTTTGTTGGTCATTCAATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTCACACCTCTAGATGTATGTTTGACTTGAATTCTGAGCTTTAAATCATGATAGACTGCTTTTCCTTGTTAGTTTTTTCTTTATGGTTATTAATCTTTTAAAATTTGTCAGTCAGGGGCGTTCAAAATATCCAGGGAAGGATTTGTATTGCTTCAGTTTGCCCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTTCTAAAAATCAAGCTGATGTTTAACTGAGCTAAAGTGAAATTCTAGGTTAATGCTGATTACTATTCCATTGATTTCATATTGGGCATCTGTAGTATCATTTCCATGATGGAGTGGATGATATTGAAAATACCGAGACATGTTTGGGGAGCTGTGTTCATCATTCGTTTTTCTAAATTATTTTTAAGAACAAAAATAGATGCTGTCTTGTAAAGATTTAATCATTATGCAATTGAAATCACTAAATCAGACAGTGAAGAACTTTTCGTGAAAACAATTCCCTTGTTTTTATTGTTTATAATAATTTTCTGATATGTTACCAATTAGATTATAGTTTGTTTTGTATGTAGGTATTCTCTTTATCAGTGACAGAATTGGGAAGCCTAGTTGCCCTTGGCCCACGCGAATCTTGTGAACTCTTTCACGATCCCTATAAGGGAAAAAGGTACCATCTAAACTTGTACTTTTAGAAACTACGACTCTCCACAATGATATGATATTGTCCACTTTGTGCATAAGCTCTCATGGCTTTGCTTTTGGAATCCCTTAGTTAGTTGATGTGGGACTCCTCTCCCAACAATCCTCAACAATCCTCCCCTTGAAGTACACTATAGAGCCTCCCCTGAGGCTTATGGAGCCCTCGAATAGTCTCTCCTTAATCGAGGCTAGACTGCTTCTCTAGAGCCCTCGAACAAAGCACATCCTTTGTTCGACACTTGAGTCACTTTTGACTACACCTTCGAGGCTCACAATTTCTTTGTTCGACATTTGAGGATTCTATTGACATAGCTCTTATACCATGTTAGAAACCACGACTCTCCAAAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCACGACTTTGTTTTTGGTTTCCCTGAAAGGCCTCATACCAACGAAAATAGTATTCCTTACTTATAAACCCATAATCAACCTCTTAATGAGCCGATCTGAGACTCCTCTTCCAATAGTCCTCAACATATACCATTCGTTGTGTCGTATTCATGTTTAGGTATTGTGCATCTTTGGTTTCCTCAAATATTTTGCTCTTCTTAGATCTCAAAATTGCTTGATTTTAACATTGAAAACAATGACGTATCGATCTTTTTCGTAGCACAAACCACCCCCTTCTTGAGTGTACATGCTGACCATTTTCTTTTTAATAGCCAAATATTTAGGTCGTAAGTTGTTTGTAAACAAAGGTCTGCAGGTTTGAAAACATAGTATGTTATGATAACAAGAGACAAAATATTTGTTCTACAGTGATGAAGGGAAGGTCAGAAAGATGCTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGCCGTTTTTTCAATCTCAGTAAGTCTTGTGTTGAAACCTTCATGATCCATTGAGGTTGAATGTAAACTGCAATGATGCTAGAGAAAGTCTTTATTTTATCCCCTTAACTTTTCTGTTCTATTTCGTTGCACAAGGCGTTCAGAACAAGCTAACCAACGTGGATGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTTAAGGTAAAGTTCTTTCCAGTTTACATGCTTATCTTTCTGTTTGATTCAATTAGGACGCATGATTGAGACATAGCACTAAACTGGCGTGTATGATTTGGGTTACCTGGAAACTGCAAAATTTTAGAAAAATAACTACCAAACAACTATAATTGAATTGGTTCGGTTGGTTTAAAAAACAAGTCTGGTTCAGTTTCATTAAGTTTAAAACTGACAATTAGTCGGCTGATTTAGTTTTAGTCACTTTGTGTTTATGTTACGGCTCAAGCCTATTGCTGATGTGGATTGTGAGTTCTCACATCGGTTGATGATCCCTTTACTCTTACAAATTTTGTGATTATAATTGGTAAACGGGATGTTTATTCATTATTTGTGCAGTTTATCTTGCCCCACCTTATGGGTTGGCATGCAATTGCAAACAGCACGACGAGAACTGAAGATAACAGGCGAGCAAATGACGCGAATCCCAGATATGGCGGTGACTTTGAATGGAGCAGATAGTCTCTACTTCGGATGGGGACGATTGTTGTTGTGCTCGTAATCTTTCACCATTTATGATTGCTATTCACTCTTTTAAAATGGTTCGTTCTTTATCTCGTATTATGTTTTGCATATTAGTTTTAAATATTATTTTGAGAGTTACTCTACTTTTTCTCCTTTAATTCATTAGCCATTTTATAAAAAATATTTTTTATTTTAATTTTAG

mRNA sequence

GGGCTCGCTAATTAAGAACATGGGCTTATAAATAGGGAGTACAGGAGCCTTATAAATAGGTTCACCTTTTACGCTTATCCATAGAACATTTTGGTTACGAGAGGATATAAAACTTTGTAGGGCCATGAGCTTTGGCGGTGAAAAAATGGTGCTCTAACTCCCGCCGGTTGTGTCTCTAATCCTCACCGCCATAGAATAGCTGCGAAGACGAAGCCGAAACCATGCTGCGTCTTCAATGCCTTTCTTCTTCATTGCTTCCGCCATTAATCCCCGAACTCTCGCCGGAAACCTCTTCGAACCGCCGACTATGTCGCCTCAACTCCTTTCGCCCACTCCTCACTCTCTCTACTACACCAAAATCTTCTCCAAAGTGCCAATACTCCTGGAACACGCAGCAGCATCAGGCGGCCTTCGAATCGGGCTTTCAGACAGATTCATTTTCCTCACAAACTCGCGCCGGAGCTGCTGCAGCATTGCCACCAAGGTTTTTTGTTGGTCATTCAATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTCACACCTCTAGATTCAGGGGCGTTCAAAATATCCAGGGAAGGATTTGTATTGCTTCAGTTTGCCCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTATTCTCTTTATCAGTGACAGAATTGGGAAGCCTAGTTGCCCTTGGCCCACGCGAATCTTGTGAACTCTTTCACGATCCCTATAAGGGAAAAAGTGATGAAGGGAAGGTCAGAAAGATGCTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGCCGTTTTTTCAATCTCAGCGTTCAGAACAAGCTAACCAACGTGGATGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTTAAGTTTATCTTGCCCCACCTTATGGGTTGGCATGCAATTGCAAACAGCACGACGAGAACTGAAGATAACAGGCGAGCAAATGACGCGAATCCCAGATATGGCGGTGACTTTGAATGGAGCAGATAGTCTCTACTTCGGATGGGGACGATTGTTGTTGTGCTCGTAATCTTTCACCATTTATGATTGCTATTCACTCTTTTAAAATGGTTCGTTCTTTATCTCGTATTATGTTTTGCATATTAGTTTTAAATATTATTTTGAGAGTTACTCTACTTTTTCTCCTTTAATTCATTAGCCATTTTATAAAAAATATTTTTTATTTTAATTTTAG

Coding sequence (CDS)

ATGCTGCGTCTTCAATGCCTTTCTTCTTCATTGCTTCCGCCATTAATCCCCGAACTCTCGCCGGAAACCTCTTCGAACCGCCGACTATGTCGCCTCAACTCCTTTCGCCCACTCCTCACTCTCTCTACTACACCAAAATCTTCTCCAAAGTGCCAATACTCCTGGAACACGCAGCAGCATCAGGCGGCCTTCGAATCGGGCTTTCAGACAGATTCATTTTCCTCACAAACTCGCGCCGGAGCTGCTGCAGCATTGCCACCAAGGTTTTTTGTTGGTCATTCAATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTCACACCTCTAGATTCAGGGGCGTTCAAAATATCCAGGGAAGGATTTGTATTGCTTCAGTTTGCCCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTATTCTCTTTATCAGTGACAGAATTGGGAAGCCTAGTTGCCCTTGGCCCACGCGAATCTTGTGAACTCTTTCACGATCCCTATAAGGGAAAAAGTGATGAAGGGAAGGTCAGAAAGATGCTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGCCGTTTTTTCAATCTCAGCGTTCAGAACAAGCTAACCAACGTGGATGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTTAAGTTTATCTTGCCCCACCTTATGGGTTGGCATGCAATTGCAAACAGCACGACGAGAACTGAAGATAACAGGCGAGCAAATGACGCGAATCCCAGATATGGCGGTGACTTTGAATGGAGCAGATAG

Protein sequence

MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQHQAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDEGKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMGWHAIANSTTRTEDNRRANDANPRYGGDFEWSR

Homology

[Close]

BLAST of CmoCh05G009520 vs. ExPASy Swiss-Prot
Match: Q66GR6 (Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY3 PE=1 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.4e-86
Identity = 151/206 (73.30%), Postives = 177/206 (85.92%), Query Frame = 0


Query: 68  FQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFV 127
           F+   F   + +  A    PRF+VGHSIYKGKAALT+EPR PEF  L+SGAFK+++EGF+
Sbjct: 64  FEKQRFGDSSSSQNAEVSSPRFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFL 123

Query: 128 LLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGK-SDEGKVRKM 187
           LLQFAPAAGVRQYDWSRKQVFSLSVTE+G+LV+LGPRESCE FHDP+KGK SDEGKVRK+
Sbjct: 124 LLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKV 183

Query: 188 LKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMGWHAIAN 247
           LKVEPLPDGSGRFFNLSVQNKL NVDES+YIPITKAE+ VL+ AF F+LPHL+GW A AN
Sbjct: 184 LKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFAN 243

Query: 248 STTRTEDNRRANDANPRYGGDFEWSR 273
           S  + ED+ R N+A+P+YGGD+EWSR
Sbjct: 244 S-IKPEDSNRLNNASPKYGGDYEWSR 268

[Close]

BLAST of CmoCh05G009520 vs. ExPASy Swiss-Prot
Match: Q9M9S3 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 9.3e-86
Identity = 151/210 (71.90%), Postives = 177/210 (84.29%), Query Frame = 0


Query: 69  QTDSFSSQ------TRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKIS 128
           QTD F  Q      +    A  LP RF+VGHSIYKGKAALTV+PR PEF  LDSGAFK+S
Sbjct: 55  QTDYFEKQRFGDSSSSPSPAEGLPARFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLS 114

Query: 129 REGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDEGK 188
           ++GF+LLQFAP+AGVRQYDWS+KQVFSLSVTE+G+LV+LGPRESCE FHDP+KGKSDEGK
Sbjct: 115 KDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGK 174

Query: 189 VRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMGWH 248
           VRK+LKVEPLPDGSG FFNLSVQNKL NVDESIYIPIT+AE+ VL+ AF F+LP+L+GWH
Sbjct: 175 VRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWH 234

Query: 249 AIANSTTRTEDNRRANDANPRYGGDFEWSR 273
           A ANS  + E+  R N+A+P YGGD+EW+R
Sbjct: 235 AFANS-IKPEETSRVNNASPNYGGDYEWNR 263

[Close]

BLAST of CmoCh05G009520 vs. ExPASy Swiss-Prot
Match: Q9LL85 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=4113 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 5.8e-80
Identity = 140/205 (68.29%), Postives = 169/205 (82.44%), Query Frame = 0


Query: 68  FQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFV 127
           F+      Q +     A  P+ FVG+SIYKGKAALTVEPR PEF+PLDSGAFK+SREG V
Sbjct: 71  FEPQQQQQQQQQQPQGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMV 130

Query: 128 LLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDEGKVRKML 187
           +LQFAPAAGVRQYDWSRKQVFSLSVTE+GS+++LG ++SCE FHDP KG+SDEG+VRK+L
Sbjct: 131 MLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVL 190

Query: 188 KVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMGWHAIANS 247
           KVEPLPDGSG FFNLSVQNKL N+DE+IYIP+TKAE+ VLV AF F++P+L+GWH   NS
Sbjct: 191 KVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNS 250

Query: 248 TTRTEDNRRANDANPRYGGDFEWSR 273
             + ED  R+N+ANPR G + EW+R
Sbjct: 251 -FKPEDASRSNNANPRSGAELEWNR 274

[Close]

BLAST of CmoCh05G009520 vs. ExPASy Swiss-Prot
Match: B2LXS7 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=WHY1 PE=2 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 8.7e-68
Identity = 118/185 (63.78%), Postives = 149/185 (80.54%), Query Frame = 0


Query: 88  RFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQV 147
           R F  +SIYKGKAAL+ +PRPP F PLDSGA+K+++EGFVLLQFAPA   RQYDW+RKQV
Sbjct: 85  RVFTSYSIYKGKAALSFDPRPPLFVPLDSGAYKVAKEGFVLLQFAPAVATRQYDWTRKQV 144

Query: 148 FSLSVTELGSLVALGPRESCELFHDPYKGKSDEGKVRKMLKVEPLPDGSGRFFNLSVQNK 207
           FSLSV E+G+L+ LGP +SCE FHDP+KG+S+EGKVRK+LK+EP PDG+GRFFNLSVQN+
Sbjct: 145 FSLSVWEIGTLLTLGPTDSCEFFHDPFKGRSEEGKVRKVLKIEPTPDGNGRFFNLSVQNR 204

Query: 208 LTNVDESIYIPITKAEYTVLVEAFKFILPHLMGWHAIANSTTRTEDNRRANDANPRYGGD 267
           L NVDESIYIPITK E+ V+V  F +I+PHLMGW     S+ + E++R    + P+   +
Sbjct: 205 LINVDESIYIPITKGEFAVIVSTFNYIIPHLMGWSTFV-SSIKPEESRPY--SRPQSTSE 264

Query: 268 FEWSR 273
           +EW R
Sbjct: 265 YEWRR 266

[Close]

BLAST of CmoCh05G009520 vs. ExPASy Swiss-Prot
Match: Q8VYF7 (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WHY2 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.7e-43
Identity = 94/223 (42.15%), Postives = 134/223 (60.09%), Query Frame = 0


Query: 59  QHQAAFES----GFQTDSFSSQTRAG----AAAALPPRFFVGHSIYKGKAALTVEPRPPE 118
           Q ++ FE+    GF + S SS    G     AA    R F  +SI+KGKAAL+VEP  P 
Sbjct: 16  QSKSLFEASTLRGFASWSNSSTPGRGFPGKDAAKPSGRLFAPYSIFKGKAALSVEPVLPS 75

Query: 119 FTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELF 178
           FT +DSG  +I R G +++ F PA G R+YDW +KQ F+LS TE+GSL+++G ++S E F
Sbjct: 76  FTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFF 135

Query: 179 HDPYKGKSDEGKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEA 238
           HDP    S+ G+VRK L V+P  DGSG F +LSV N +   ++   +P+TKAE+ V+  A
Sbjct: 136 HDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTA 195

Query: 239 FKFILPHLMGWHAI-ANSTTRTEDNRRANDANPRYGGDFEWSR 273
           F F LPH+MGW+ +  +  T    +R  +        + EW +
Sbjct: 196 FSFALPHIMGWNRLTGHVNTEALPSRNVSHLKTEPQLELEWDK 238

[Close]

BLAST of CmoCh05G009520 vs. ExPASy TrEMBL
Match: A0A6J1G4J7 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111450739 PE=3 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 3.1e-153
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60
           MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH
Sbjct: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60

Query: 61  QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK 120
           QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK
Sbjct: 61  QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK 120

Query: 121 ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE 180
           ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE
Sbjct: 121 ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE 180

Query: 181 GKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG 240
           GKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG
Sbjct: 181 GKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG 240

Query: 241 WHAIANSTTRTEDNRRANDANPRYGGDFEWSR 273
           WHAIANSTTRTEDNRRANDANPRYGGDFEWSR
Sbjct: 241 WHAIANSTTRTEDNRRANDANPRYGGDFEWSR 272

[Close]

BLAST of CmoCh05G009520 vs. ExPASy TrEMBL
Match: A0A6J1KBN5 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111494004 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 7.8e-144
Identity = 258/272 (94.85%), Postives = 261/272 (95.96%), Query Frame = 0


Query: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60
           MLRLQCLSSSLL PLIPELSPETSSNRRLCRLNSFRPLLT +T PK SPKCQYSWNTQQH
Sbjct: 1   MLRLQCLSSSLLLPLIPELSPETSSNRRLCRLNSFRPLLTFTTAPKFSPKCQYSWNTQQH 60

Query: 61  QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK 120
           QAAFESG  T SF SQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK
Sbjct: 61  QAAFESGSPTGSFPSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK 120

Query: 121 ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE 180
           ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE
Sbjct: 121 ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE 180

Query: 181 GKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG 240
           GKVRK+LKVEPLPDGSGRFFNLSVQN LTNVDESIYIPITKAEYTVLVEAFKFILPHLMG
Sbjct: 181 GKVRKILKVEPLPDGSGRFFNLSVQNNLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG 240

Query: 241 WHAIANSTTRTEDNRRANDANPRYGGDFEWSR 273
           WHAIANS TRTEDNRRAN+ANPRYG DFEWSR
Sbjct: 241 WHAIANSMTRTEDNRRANEANPRYGRDFEWSR 272

[Close]

BLAST of CmoCh05G009520 vs. ExPASy TrEMBL
Match: A0A5D3BP35 (Single-stranded DNA-binding protein WHY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00810 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.1e-129
Identity = 234/273 (85.71%), Postives = 246/273 (90.11%), Query Frame = 0


Query: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60
           MLRLQ LSSSLLP   PELSPET SN RLC LN  RPLLTL+TT K SPKCQYSWNT QH
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60

Query: 61  -QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
            Q++FE   QTDSFS Q+RAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF
Sbjct: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120

Query: 121 KISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSD 180
           KISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CE FHDPYKGKSD
Sbjct: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180

Query: 181 EGKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRK+LKVEPLPDGSG FFNLSVQNKL NVDESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHAIANSTTRTEDNRRANDANPRYGGDFEWSR 273
           GWH IAN+ T+ ED+ R N ANPRYGGDFEW+R
Sbjct: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273

[Close]

BLAST of CmoCh05G009520 vs. ExPASy TrEMBL
Match: A0A1S3C3B0 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103496412 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.1e-129
Identity = 234/273 (85.71%), Postives = 246/273 (90.11%), Query Frame = 0


Query: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60
           MLRLQ LSSSLLP   PELSPET SN RLC LN  RPLLTL+TT K SPKCQYSWNT QH
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60

Query: 61  -QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
            Q++FE   QTDSFS Q+RAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF
Sbjct: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120

Query: 121 KISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSD 180
           KISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CE FHDPYKGKSD
Sbjct: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180

Query: 181 EGKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRK+LKVEPLPDGSG FFNLSVQNKL NVDESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHAIANSTTRTEDNRRANDANPRYGGDFEWSR 273
           GWH IAN+ T+ ED+ R N ANPRYGGDFEW+R
Sbjct: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273

[Close]

BLAST of CmoCh05G009520 vs. ExPASy TrEMBL
Match: A0A0A0KG25 (WHY1 OS=Cucumis sativus OX=3659 GN=Csa_6G404240 PE=2 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.6e-125
Identity = 230/276 (83.33%), Postives = 243/276 (88.04%), Query Frame = 0


Query: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60
           MLRLQCLSSS LP   PELSPET SN RLC LN  RPL TL+TT K + KCQYSWNTQQH
Sbjct: 1   MLRLQCLSSSFLPTFNPELSPETLSNPRLCTLNFSRPLPTLTTTRKPTSKCQYSWNTQQH 60

Query: 61  -QAAFESGFQTDSFSSQTRAG---AAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS 120
            Q+AFE    TDS S Q+RAG   AAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS
Sbjct: 61  QQSAFEPAPHTDSLSPQSRAGAAAAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDS 120

Query: 121 GAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKG 180
           GAFKISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CE FHDPYKG
Sbjct: 121 GAFKISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKG 180

Query: 181 KSDEGKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILP 240
           KSDEGKVRK+LKVEPLPDGSG FFNL+VQNKL NVDESIYIPITKAEYTVLVEAFKFILP
Sbjct: 181 KSDEGKVRKILKVEPLPDGSGHFFNLTVQNKLINVDESIYIPITKAEYTVLVEAFKFILP 240

Query: 241 HLMGWHAIANSTTRTEDNRRANDANPRYGGDFEWSR 273
           HLMGWH IAN+ T+ ED+ R N ANPRYGGDFEW+R
Sbjct: 241 HLMGWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 276

[Close]

BLAST of CmoCh05G009520 vs. NCBI nr
Match: XP_022946771.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita moschata] >KAG6599060.1 Single-stranded DNA-binding protein WHY3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 550.8 bits (1418), Expect = 6.5e-153
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60
           MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH
Sbjct: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60

Query: 61  QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK 120
           QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK
Sbjct: 61  QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK 120

Query: 121 ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE 180
           ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE
Sbjct: 121 ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE 180

Query: 181 GKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG 240
           GKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG
Sbjct: 181 GKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG 240

Query: 241 WHAIANSTTRTEDNRRANDANPRYGGDFEWSR 273
           WHAIANSTTRTEDNRRANDANPRYGGDFEWSR
Sbjct: 241 WHAIANSTTRTEDNRRANDANPRYGGDFEWSR 272

[Close]

BLAST of CmoCh05G009520 vs. NCBI nr
Match: KAG7029998.1 (Single-stranded DNA-binding protein WHY1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 547.0 bits (1408), Expect = 9.4e-152
Identity = 270/272 (99.26%), Postives = 271/272 (99.63%), Query Frame = 0


Query: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60
           MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH
Sbjct: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60

Query: 61  QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK 120
           QAAFESG QTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK
Sbjct: 61  QAAFESGLQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK 120

Query: 121 ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE 180
           ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE
Sbjct: 121 ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE 180

Query: 181 GKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG 240
           GKVRK+LKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG
Sbjct: 181 GKVRKILKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG 240

Query: 241 WHAIANSTTRTEDNRRANDANPRYGGDFEWSR 273
           WHAIANSTTRTEDNRRANDANPRYGGDFEWSR
Sbjct: 241 WHAIANSTTRTEDNRRANDANPRYGGDFEWSR 272

[Close]

BLAST of CmoCh05G009520 vs. NCBI nr
Match: XP_023546045.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543.9 bits (1400), Expect = 7.9e-151
Identity = 269/272 (98.90%), Postives = 270/272 (99.26%), Query Frame = 0


Query: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60
           MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH
Sbjct: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60

Query: 61  QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK 120
           QAAFESG QTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK
Sbjct: 61  QAAFESGSQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK 120

Query: 121 ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE 180
           ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE
Sbjct: 121 ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE 180

Query: 181 GKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG 240
           GKVRK+LKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG
Sbjct: 181 GKVRKILKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG 240

Query: 241 WHAIANSTTRTEDNRRANDANPRYGGDFEWSR 273
           WHAIANS TRTEDNRRANDANPRYGGDFEWSR
Sbjct: 241 WHAIANSMTRTEDNRRANDANPRYGGDFEWSR 272

[Close]

BLAST of CmoCh05G009520 vs. NCBI nr
Match: XP_022999747.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 519.6 bits (1337), Expect = 1.6e-143
Identity = 258/272 (94.85%), Postives = 261/272 (95.96%), Query Frame = 0


Query: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60
           MLRLQCLSSSLL PLIPELSPETSSNRRLCRLNSFRPLLT +T PK SPKCQYSWNTQQH
Sbjct: 1   MLRLQCLSSSLLLPLIPELSPETSSNRRLCRLNSFRPLLTFTTAPKFSPKCQYSWNTQQH 60

Query: 61  QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK 120
           QAAFESG  T SF SQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK
Sbjct: 61  QAAFESGSPTGSFPSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFK 120

Query: 121 ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE 180
           ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE
Sbjct: 121 ISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDE 180

Query: 181 GKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG 240
           GKVRK+LKVEPLPDGSGRFFNLSVQN LTNVDESIYIPITKAEYTVLVEAFKFILPHLMG
Sbjct: 181 GKVRKILKVEPLPDGSGRFFNLSVQNNLTNVDESIYIPITKAEYTVLVEAFKFILPHLMG 240

Query: 241 WHAIANSTTRTEDNRRANDANPRYGGDFEWSR 273
           WHAIANS TRTEDNRRAN+ANPRYG DFEWSR
Sbjct: 241 WHAIANSMTRTEDNRRANEANPRYGRDFEWSR 272

[Close]

BLAST of CmoCh05G009520 vs. NCBI nr
Match: XP_008456468.1 (PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis melo] >KAA0036450.1 single-stranded DNA-binding protein WHY1 [Cucumis melo var. makuwa] >TYK00036.1 single-stranded DNA-binding protein WHY1 [Cucumis melo var. makuwa])

HSP 1 Score: 469.9 bits (1208), Expect = 1.5e-128
Identity = 234/273 (85.71%), Postives = 246/273 (90.11%), Query Frame = 0


Query: 1   MLRLQCLSSSLLPPLIPELSPETSSNRRLCRLNSFRPLLTLSTTPKSSPKCQYSWNTQQH 60
           MLRLQ LSSSLLP   PELSPET SN RLC LN  RPLLTL+TT K SPKCQYSWNT QH
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60

Query: 61  -QAAFESGFQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
            Q++FE   QTDSFS Q+RAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF
Sbjct: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120

Query: 121 KISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSD 180
           KISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CE FHDPYKGKSD
Sbjct: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180

Query: 181 EGKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRK+LKVEPLPDGSG FFNLSVQNKL NVDESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHAIANSTTRTEDNRRANDANPRYGGDFEWSR 273
           GWH IAN+ T+ ED+ R N ANPRYGGDFEW+R
Sbjct: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273

[Close]

BLAST of CmoCh05G009520 vs. TAIR 10
Match: AT2G02740.2 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 322.0 bits (824), Expect = 4.6e-88
Identity = 150/205 (73.17%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 68  FQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFV 127
           F+   F   + +  A    PRF+VGHSIYKGKAALT+EPR PEF  L+SGAFK+++EGF+
Sbjct: 64  FEKQRFGDSSSSQNAEVSSPRFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFL 123

Query: 128 LLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDEGKVRKML 187
           LLQFAPAAGVRQYDWSRKQVFSLSVTE+G+LV+LGPRESCE FHDP+KGK DEGKVRK+L
Sbjct: 124 LLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGDEGKVRKVL 183

Query: 188 KVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMGWHAIANS 247
           KVEPLPDGSGRFFNLSVQNKL NVDES+YIPITKAE+ VL+ AF F+LPHL+GW A ANS
Sbjct: 184 KVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFANS 243

Query: 248 TTRTEDNRRANDANPRYGGDFEWSR 273
             + ED+ R N+A+P+YGGD+EWSR
Sbjct: 244 -IKPEDSNRLNNASPKYGGDYEWSR 267

[Close]

BLAST of CmoCh05G009520 vs. TAIR 10
Match: AT2G02740.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 318.9 bits (816), Expect = 3.9e-87
Identity = 151/206 (73.30%), Postives = 177/206 (85.92%), Query Frame = 0


Query: 68  FQTDSFSSQTRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFV 127
           F+   F   + +  A    PRF+VGHSIYKGKAALT+EPR PEF  L+SGAFK+++EGF+
Sbjct: 64  FEKQRFGDSSSSQNAEVSSPRFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFL 123

Query: 128 LLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGK-SDEGKVRKM 187
           LLQFAPAAGVRQYDWSRKQVFSLSVTE+G+LV+LGPRESCE FHDP+KGK SDEGKVRK+
Sbjct: 124 LLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKV 183

Query: 188 LKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMGWHAIAN 247
           LKVEPLPDGSGRFFNLSVQNKL NVDES+YIPITKAE+ VL+ AF F+LPHL+GW A AN
Sbjct: 184 LKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFAN 243

Query: 248 STTRTEDNRRANDANPRYGGDFEWSR 273
           S  + ED+ R N+A+P+YGGD+EWSR
Sbjct: 244 S-IKPEDSNRLNNASPKYGGDYEWSR 268

[Close]

BLAST of CmoCh05G009520 vs. TAIR 10
Match: AT1G14410.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 318.2 bits (814), Expect = 6.6e-87
Identity = 151/210 (71.90%), Postives = 177/210 (84.29%), Query Frame = 0


Query: 69  QTDSFSSQ------TRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKIS 128
           QTD F  Q      +    A  LP RF+VGHSIYKGKAALTV+PR PEF  LDSGAFK+S
Sbjct: 55  QTDYFEKQRFGDSSSSPSPAEGLPARFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLS 114

Query: 129 REGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDEGK 188
           ++GF+LLQFAP+AGVRQYDWS+KQVFSLSVTE+G+LV+LGPRESCE FHDP+KGKSDEGK
Sbjct: 115 KDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGK 174

Query: 189 VRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAFKFILPHLMGWH 248
           VRK+LKVEPLPDGSG FFNLSVQNKL NVDESIYIPIT+AE+ VL+ AF F+LP+L+GWH
Sbjct: 175 VRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWH 234

Query: 249 AIANSTTRTEDNRRANDANPRYGGDFEWSR 273
           A ANS  + E+  R N+A+P YGGD+EW+R
Sbjct: 235 AFANS-IKPEETSRVNNASPNYGGDYEWNR 263

[Close]

BLAST of CmoCh05G009520 vs. TAIR 10
Match: AT1G71260.1 (WHIRLY 2 )

HSP 1 Score: 176.0 bits (445), Expect = 4.1e-44
Identity = 94/223 (42.15%), Postives = 134/223 (60.09%), Query Frame = 0


Query: 59  QHQAAFES----GFQTDSFSSQTRAG----AAAALPPRFFVGHSIYKGKAALTVEPRPPE 118
           Q ++ FE+    GF + S SS    G     AA    R F  +SI+KGKAAL+VEP  P 
Sbjct: 16  QSKSLFEASTLRGFASWSNSSTPGRGFPGKDAAKPSGRLFAPYSIFKGKAALSVEPVLPS 75

Query: 119 FTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELF 178
           FT +DSG  +I R G +++ F PA G R+YDW +KQ F+LS TE+GSL+++G ++S E F
Sbjct: 76  FTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFF 135

Query: 179 HDPYKGKSDEGKVRKMLKVEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEA 238
           HDP    S+ G+VRK L V+P  DGSG F +LSV N +   ++   +P+TKAE+ V+  A
Sbjct: 136 HDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTA 195

Query: 239 FKFILPHLMGWHAI-ANSTTRTEDNRRANDANPRYGGDFEWSR 273
           F F LPH+MGW+ +  +  T    +R  +        + EW +
Sbjct: 196 FSFALPHIMGWNRLTGHVNTEALPSRNVSHLKTEPQLELEWDK 238

The following BLAST results are available for this feature:

BLAST of CmoCh05G009520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q66GR6	5.4e-86	73.30	Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q9M9S3	9.3e-86	71.90	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q9LL85	5.8e-80	68.29	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=...	[more]
B2LXS7	8.7e-68	63.78	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=W...	[more]
Q8VYF7	5.7e-43	42.15	Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana ...	[more]

BLAST of CmoCh05G009520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4J7	3.1e-153	100.00	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A6J1KBN5	7.8e-144	94.85	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita maxima...	[more]
A0A5D3BP35	7.1e-129	85.71	Single-stranded DNA-binding protein WHY1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C3B0	7.1e-129	85.71	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucumis melo OX=...	[more]
A0A0A0KG25	3.6e-125	83.33	WHY1 OS=Cucumis sativus OX=3659 GN=Csa_6G404240 PE=2 SV=1	[more]

BLAST of CmoCh05G009520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946771.1	6.5e-153	100.00	single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita moschata...	[more]
KAG7029998.1	9.4e-152	99.26	Single-stranded DNA-binding protein WHY1, chloroplastic [Cucurbita argyrosperma ...	[more]
XP_023546045.1	7.9e-151	98.90	single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita pepo sub...	[more]
XP_022999747.1	1.6e-143	94.85	single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita maxima]	[more]
XP_008456468.1	1.5e-128	85.71	PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis...	[more]

BLAST of CmoCh05G009520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02740.2	4.6e-88	73.17	ssDNA-binding transcriptional regulator	[more]
AT2G02740.1	3.9e-87	73.30	ssDNA-binding transcriptional regulator	[more]
AT1G14410.1	6.6e-87	71.90	ssDNA-binding transcriptional regulator	[more]
AT1G71260.1	4.1e-44	42.15	WHIRLY 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	2.30.31.10	Transcriptional Coactivator Pc4; Chain A	coord: 80..255 e-value: 4.2E-77 score: 259.7
IPR009044	ssDNA-binding transcriptional regulator	SUPERFAMILY	54447	ssDNA-binding transcriptional regulator domain	coord: 87..272
IPR013742	Whirly transcription factor	PFAM	PF08536	Whirly	coord: 95..229 e-value: 7.9E-60 score: 200.6
IPR013742	Whirly transcription factor	PANTHER	PTHR31745	SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL	coord: 69..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..272
None	No IPR available	PANTHER	PTHR31745:SF3	SINGLE-STRANDED DNA-BINDING PROTEIN WHY3, CHLOROPLASTIC	coord: 69..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G009520.1	CmoCh05G009520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding