CmoCh05G008820 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G008820
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionTMV resistance protein N-like
LocationCmo_Chr05: 5974403 .. 5974984 (+)
RNA-Seq ExpressionCmoCh05G008820
SyntenyCmoCh05G008820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCAGAAATTGCTGAAAACATGAAATCTTTAGTACGGTTGGATTTGAGATTTACAACCATAAAGGAGCTTCCTTCATCAATTAGGTACCTCTTACAACGCTCTTTGATTTAGATTTTTACGGTTGTACAAACTTCATCTCCATTCCTAATACCATTTATTTGTTAAACAATCTTCGGGAGCTTAGCCTTGGTGGGTGTTCTAGATTTGAAATGCTACCCCTCACATGGGACTCAACTATCCATCCAACATGCTCTTCTTCACATCGTGGAAACTTTGTTGAGTTCAGAATTTCCTCATTTAGCAGTTTCAAAAGAGCCTATGTTTTATGAACACCATTACTTAGTTCTTGAAATATGCACCATATCAAAGGCTGATTTTTTGAAAGCTTTATGTAAAGTCACCCCTTTCTTATCTTCTCTATTCTTGTCGGGTAACAAATTCTCATGTCTCCCTAAGTTTTTGTCCTTGAAGAATCTCCAAATAAGGAATGACATGTTTCTTCAAGAAATTCCAAACCTTCCTATGTGTATACAAGAATTGGATGCCATTAGTTGTCAACCTTTGGCAAGAAGTTGA

mRNA sequence

ATGTTTCCAGAAATTGCTGAAAACATGAAATCTTTAGTACGGTTGGATTTGAGATTTACAACCATAAAGGAGCTTCCTTCATCAATTAGCTTAGCCTTGGTGGGTGTTCTAGATTTGAAATGCTACCCCTCACATGGGACTCAACTATCCATCCAACATGCTCTTCTTCACATCGTGGAAACTTTGTTGAGTTCAGAATTTCCTCATTTAGCAGTTTCAAAAGAGCCTATGTTTTATGAACACCATTACTTAGTTCTTGAAATATGCACCATATCAAAGGCTGATTTTTTGAAAGCTTTATGTAAAGTCACCCCTTTCTTATCTTCTCTATTCTTGTCGGGTAACAAATTCTCATGTCTCCCTAAGTTTTTGTCCTTGAAGAATCTCCAAATAAGGAATGACATGTTTCTTCAAGAAATTCCAAACCTTCCTATGTGTATACAAGAATTGGATGCCATTAGTTGTCAACCTTTGGCAAGAAGTTGA

Coding sequence (CDS)

ATGTTTCCAGAAATTGCTGAAAACATGAAATCTTTAGTACGGTTGGATTTGAGATTTACAACCATAAAGGAGCTTCCTTCATCAATTAGCTTAGCCTTGGTGGGTGTTCTAGATTTGAAATGCTACCCCTCACATGGGACTCAACTATCCATCCAACATGCTCTTCTTCACATCGTGGAAACTTTGTTGAGTTCAGAATTTCCTCATTTAGCAGTTTCAAAAGAGCCTATGTTTTATGAACACCATTACTTAGTTCTTGAAATATGCACCATATCAAAGGCTGATTTTTTGAAAGCTTTATGTAAAGTCACCCCTTTCTTATCTTCTCTATTCTTGTCGGGTAACAAATTCTCATGTCTCCCTAAGTTTTTGTCCTTGAAGAATCTCCAAATAAGGAATGACATGTTTCTTCAAGAAATTCCAAACCTTCCTATGTGTATACAAGAATTGGATGCCATTAGTTGTCAACCTTTGGCAAGAAGTTGA

Protein sequence

MFPEIAENMKSLVRLDLRFTTIKELPSSISLALVGVLDLKCYPSHGTQLSIQHALLHIVETLLSSEFPHLAVSKEPMFYEHHYLVLEICTISKADFLKALCKVTPFLSSLFLSGNKFSCLPKFLSLKNLQIRNDMFLQEIPNLPMCIQELDAISCQPLARS
Homology
BLAST of CmoCh05G008820 vs. ExPASy Swiss-Prot
Match: Q9SZ66 (Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-04
Identity = 49/163 (30.06%), Postives = 77/163 (47.24%), Query Frame = 0

Query: 1   MFPEIAENMKSLVRLDLRFTTIKELPSSISLALVGVLDLKCYPSHGTQLSIQHALLHIVE 60
           +FPEI E+M+SL  L +  T+I E+P  + L+     ++K +   GT   +  ++  +  
Sbjct: 796 VFPEIKEDMESLEILLMDDTSITEMPKMMHLS-----NIKTFSLCGTSSHVSVSMFFMPP 855

Query: 61  TLLSSEFPHLAVSKEPMFYEHHYLVLEICTISK-ADFLKALCKVTPFLSSLFLSGNKFSC 120
           TL  S    L +S+              C++ K  D +  L      L SL LSGN    
Sbjct: 856 TLGCSRLTDLYLSR--------------CSLYKLPDNIGGLSS----LQSLCLSGNNIEN 915

Query: 121 LPK-FLSLKNLQ---IRNDMFLQEIPNLPMCIQELDAISCQPL 159
           LP+ F  L NL+   ++    L+ +P LP  +Q LDA  C+ L
Sbjct: 916 LPESFNQLNNLKWFDLKFCKMLKSLPVLPQNLQYLDAHECESL 935

BLAST of CmoCh05G008820 vs. ExPASy TrEMBL
Match: A0A6J1G497 (disease resistance protein RPS6-like OS=Cucurbita moschata OX=3662 GN=LOC111450596 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 8.9e-47
Identity = 118/198 (59.60%), Postives = 128/198 (64.65%), Query Frame = 0

Query: 1   MFPEIAENMKSLVRLDLRFTTIKELPSSI-------SLALVGVLDLKCYPS--------- 60
           MFPEIAENMKSLVRLDL FT IKELPSSI        L L G  +L   P+         
Sbjct: 720 MFPEIAENMKSLVRLDLSFTAIKELPSSIRYLTALFDLDLHGCTNLISIPNTIYLLHNLR 779

Query: 61  ---------------------HGTQLSIQHALLHIVETLLSSEFPHLAVSKEPMFYEHHY 120
                                H T  S  H   + VE  +SS     +  +EPMFYEHHY
Sbjct: 780 ELSLGGCSRFEMLPLTWDSTIHPTCSSSNHG--NFVEFRISS---FSSFKREPMFYEHHY 839

Query: 121 LVLEICTISKADFLKALCKVTPFLSSLFLSGNKFSCLPKFLSLKNLQIRNDMFLQEIPNL 162
           LVLE CTIS  DFLKALC+VTPFLSSLFLSGNKFSCLPKFLSLKNL+IRNDMFLQEIPNL
Sbjct: 840 LVLENCTISNTDFLKALCEVTPFLSSLFLSGNKFSCLPKFLSLKNLRIRNDMFLQEIPNL 899

BLAST of CmoCh05G008820 vs. ExPASy TrEMBL
Match: A0A1S3C0A4 (LOW QUALITY PROTEIN: TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103495402 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.4e-30
Identity = 97/197 (49.24%), Postives = 110/197 (55.84%), Query Frame = 0

Query: 1    MFPEIAENMKSLVRLDLRFTTIKELPSSIS-------LALVGVLDLKCYPSHGTQL-SIQ 60
            MFP+IAENMKSL+ L L  T I+ELPSSI        L L G  +L   PS    L S++
Sbjct: 851  MFPKIAENMKSLMSLHLDSTAIRELPSSIGFLTALLLLNLNGCTNLISLPSTIYLLKSLK 910

Query: 61   HALL------------------------HIVETLLSSEFPHLAVSKEPMFYEHHYLVLEI 120
            H  L                         I+ET  SSEFPHL V KE +  +   L L  
Sbjct: 911  HLYLGGCSRFQMFSHRWDPTTHPVCSFSKIMETSSSSEFPHLLVPKESLCSKFTLLDLRC 970

Query: 121  CTISKADFLKALCKVTPFLSSLFLSGNKF----SCLPKFLSLKNLQIRNDMFLQEIPNLP 162
            C IS  DFL  LCKV PFLSS+ LS NKF    SCL KF+SL NLQ+RN  FLQEIPNLP
Sbjct: 971  CNISNVDFLXILCKVAPFLSSILLSENKFSSLPSCLHKFMSLWNLQLRNCKFLQEIPNLP 1030

BLAST of CmoCh05G008820 vs. ExPASy TrEMBL
Match: A0A5A7VCN0 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00680 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 4.4e-30
Identity = 96/197 (48.73%), Postives = 111/197 (56.35%), Query Frame = 0

Query: 1    MFPEIAENMKSLVRLDLRFTTIKELPSSIS-------LALVGVLDLKCYPSHGTQL-SIQ 60
            MFP+IAENMKSL+ L L  T I+ELPSSI        L L G  +L   PS    L S++
Sbjct: 825  MFPKIAENMKSLMSLHLDSTAIRELPSSIGFLTALLLLNLNGCTNLISLPSTIYLLKSLK 884

Query: 61   HALL------------------------HIVETLLSSEFPHLAVSKEPMFYEHHYLVLEI 120
            H  L                         I+ET  SSEFPHL V KE +  +   L L  
Sbjct: 885  HLYLGGCSRFQMFSHRWDPTTHPVCSFSKIMETSSSSEFPHLLVPKESLCSKFTLLDLRC 944

Query: 121  CTISKADFLKALCKVTPFLSSLFLSGNKF----SCLPKFLSLKNLQIRNDMFLQEIPNLP 162
            C IS  DFL+ LCKV PFLSS+ LS NKF    SCL KF+SL NLQ+RN  FLQEIPNLP
Sbjct: 945  CNISNVDFLEILCKVAPFLSSILLSENKFSSLPSCLHKFMSLWNLQLRNCKFLQEIPNLP 1004

BLAST of CmoCh05G008820 vs. ExPASy TrEMBL
Match: A0A0A0LLK3 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G020890 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.3e-29
Identity = 94/197 (47.72%), Postives = 111/197 (56.35%), Query Frame = 0

Query: 1    MFPEIAENMKSLVRLDLRFTTIKELPSSIS-------LALVGVLDLKCYPSHGTQL-SIQ 60
            MFP+IAENMKSL+ L L  T I+ELPSSI        L L G  +L   PS    L S++
Sbjct: 853  MFPKIAENMKSLISLHLDSTAIRELPSSIGYLTALLVLNLHGCTNLISLPSTIYLLKSLK 912

Query: 61   HALL------------------------HIVETLLSSEFPHLAVSKEPMFYEHHYLVLEI 120
            H  L                         I++T  SSEFPHL V KE +  +   L L+ 
Sbjct: 913  HLYLGGCSRFQLFSRKWDPTAHPLCSFSKIMDTSSSSEFPHLLVPKESLCSKFTMLDLQC 972

Query: 121  CTISKADFLKALCKVTPFLSSLFLSGNKFS----CLPKFLSLKNLQIRNDMFLQEIPNLP 162
            C IS  DFL+ LC V PFLSS+ LS NKFS    CL KF+SL NLQ+RN  FLQEIPNLP
Sbjct: 973  CNISNVDFLEILCNVAPFLSSILLSENKFSSLPPCLHKFMSLWNLQLRNCKFLQEIPNLP 1032

BLAST of CmoCh05G008820 vs. ExPASy TrEMBL
Match: A0A5D3D437 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00140 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 5.6e-25
Identity = 89/198 (44.95%), Postives = 101/198 (51.01%), Query Frame = 0

Query: 2   FPEIAENMKSLVRLDLRFTTIKELPSSI-------------------------------S 61
           FP I ENMKSL  LDL FT IKELPSSI                                
Sbjct: 795 FPTIDENMKSLRHLDLDFTAIKELPSSIGYLTELCTLNLTSCTNLISLPNTIYLLRNLDE 854

Query: 62  LALVGVLDLKCYPSHGTQLSIQ---HALLHIVETLLSSEFPHLAVSKEPMFYEHHYLVLE 121
           L L G    + +P H    SIQ        I  T  S EFPHL V  E +F     L L+
Sbjct: 855 LLLSGCSRFRIFP-HKWDRSIQPVCSPTKMIETTSWSLEFPHLLVPNESLFSHFTLLDLK 914

Query: 122 ICTISKADFLKALCKVTPFLSSLFLSGNKF----SCLPKFLSLKNLQIRNDMFLQEIPNL 162
            C IS A FL+ LC V PFLS L LS NKF    SCL KF+SL NL+++N  FLQEIPNL
Sbjct: 915 SCNISNAKFLEILCDVAPFLSDLRLSENKFSSLPSCLHKFMSLWNLELKNCKFLQEIPNL 974

BLAST of CmoCh05G008820 vs. NCBI nr
Match: XP_022946575.1 (disease resistance protein RPS6-like [Cucurbita moschata])

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-46
Identity = 118/198 (59.60%), Postives = 128/198 (64.65%), Query Frame = 0

Query: 1   MFPEIAENMKSLVRLDLRFTTIKELPSSI-------SLALVGVLDLKCYPS--------- 60
           MFPEIAENMKSLVRLDL FT IKELPSSI        L L G  +L   P+         
Sbjct: 720 MFPEIAENMKSLVRLDLSFTAIKELPSSIRYLTALFDLDLHGCTNLISIPNTIYLLHNLR 779

Query: 61  ---------------------HGTQLSIQHALLHIVETLLSSEFPHLAVSKEPMFYEHHY 120
                                H T  S  H   + VE  +SS     +  +EPMFYEHHY
Sbjct: 780 ELSLGGCSRFEMLPLTWDSTIHPTCSSSNHG--NFVEFRISS---FSSFKREPMFYEHHY 839

Query: 121 LVLEICTISKADFLKALCKVTPFLSSLFLSGNKFSCLPKFLSLKNLQIRNDMFLQEIPNL 162
           LVLE CTIS  DFLKALC+VTPFLSSLFLSGNKFSCLPKFLSLKNL+IRNDMFLQEIPNL
Sbjct: 840 LVLENCTISNTDFLKALCEVTPFLSSLFLSGNKFSCLPKFLSLKNLRIRNDMFLQEIPNL 899

BLAST of CmoCh05G008820 vs. NCBI nr
Match: KAG6598997.1 (Disease resistance-like protein DSC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194.9 bits (494), Expect = 5.4e-46
Identity = 117/198 (59.09%), Postives = 128/198 (64.65%), Query Frame = 0

Query: 1   MFPEIAENMKSLVRLDLRFTTIKELPSSI-------SLALVGVLDLKCYPS--------- 60
           MFP+IAENMKSLVRLDL FT IKELPSSI        L L G  +L   P+         
Sbjct: 441 MFPKIAENMKSLVRLDLSFTAIKELPSSIRYLTALFDLDLHGCTNLISIPNTIYLLHNLR 500

Query: 61  ---------------------HGTQLSIQHALLHIVETLLSSEFPHLAVSKEPMFYEHHY 120
                                H T  S  H   + VE  +SS     +  +EPMFYEHHY
Sbjct: 501 ELSLGGCSRFEMLPLTWDSTIHPTCSSSNHG--NFVEFRISS---FSSFKREPMFYEHHY 560

Query: 121 LVLEICTISKADFLKALCKVTPFLSSLFLSGNKFSCLPKFLSLKNLQIRNDMFLQEIPNL 162
           LVLE CTIS  DFLKALC+VTPFLSSLFLSGNKFSCLPKFLSLKNL+IRNDMFLQEIPNL
Sbjct: 561 LVLENCTISNTDFLKALCEVTPFLSSLFLSGNKFSCLPKFLSLKNLRIRNDMFLQEIPNL 620

BLAST of CmoCh05G008820 vs. NCBI nr
Match: XP_023520945.1 (protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 7.0e-46
Identity = 117/197 (59.39%), Postives = 127/197 (64.47%), Query Frame = 0

Query: 2   FPEIAENMKSLVRLDLRFTTIKELPSSI-------SLALVGVLDLKCYPS---------- 61
           FPEIAENMKSLVRLDL FT IKELPSSI        L L G  +L   P+          
Sbjct: 773 FPEIAENMKSLVRLDLSFTAIKELPSSIRYLTALFDLDLHGCTNLISIPNTIYLLHNLRE 832

Query: 62  --------------------HGTQLSIQHALLHIVETLLSSEFPHLAVSKEPMFYEHHYL 121
                               H T  S  H   + VE  +SS     +  +EPMFYEHHYL
Sbjct: 833 LSLGGCSRFEMLPLTWDSIIHPTCSSSNHG--NFVEFRISS---FSSFKREPMFYEHHYL 892

Query: 122 VLEICTISKADFLKALCKVTPFLSSLFLSGNKFSCLPKFLSLKNLQIRNDMFLQEIPNLP 162
           VLE CTIS  DFLKALC+VTPFLSSLFLSGNKFSCLPKFLSLKNL+IRNDMFLQEIPNLP
Sbjct: 893 VLEKCTISNTDFLKALCEVTPFLSSLFLSGNKFSCLPKFLSLKNLRIRNDMFLQEIPNLP 952

BLAST of CmoCh05G008820 vs. NCBI nr
Match: XP_038877735.1 (disease resistance protein RPS6-like, partial [Benincasa hispida])

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-30
Identity = 96/197 (48.73%), Postives = 113/197 (57.36%), Query Frame = 0

Query: 1   MFPEIAENMKSLVRLDLRFTTIKELPSSIS-------LALVGVLDLKCYPSHGTQL-SIQ 60
           +FP+IAENMKSL+ L L FT I+ELPSSI        L L G  +L   PS    L S+ 
Sbjct: 782 LFPKIAENMKSLMSLHLDFTGIRELPSSIGYLTSLLLLNLDGCTNLISLPSTIYLLKSLN 841

Query: 61  HALL------------------------HIVETLLSSEFPHLAVSKEPMFYEHHYLVLEI 120
           H  L                         I+ETL SSEFPHL V KE +  +   L L+ 
Sbjct: 842 HLRLGGCSRFEMFSHKWDPTTHPVCSFSKIMETLSSSEFPHLLVPKESLCSKFTLLDLQC 901

Query: 121 CTISKADFLKALCKVTPFLSSLFLSGNKF----SCLPKFLSLKNLQIRNDMFLQEIPNLP 162
           C I   DFL+ LC V PFLSS+ LS NKF    SCL KF+SL NLQ+RN  FLQEIPNLP
Sbjct: 902 CNIPNVDFLEILCNVAPFLSSILLSENKFSSLPSCLHKFMSLWNLQLRNCKFLQEIPNLP 961

BLAST of CmoCh05G008820 vs. NCBI nr
Match: XP_008455171.1 (PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 141.4 bits (355), Expect = 7.0e-30
Identity = 97/197 (49.24%), Postives = 110/197 (55.84%), Query Frame = 0

Query: 1    MFPEIAENMKSLVRLDLRFTTIKELPSSIS-------LALVGVLDLKCYPSHGTQL-SIQ 60
            MFP+IAENMKSL+ L L  T I+ELPSSI        L L G  +L   PS    L S++
Sbjct: 851  MFPKIAENMKSLMSLHLDSTAIRELPSSIGFLTALLLLNLNGCTNLISLPSTIYLLKSLK 910

Query: 61   HALL------------------------HIVETLLSSEFPHLAVSKEPMFYEHHYLVLEI 120
            H  L                         I+ET  SSEFPHL V KE +  +   L L  
Sbjct: 911  HLYLGGCSRFQMFSHRWDPTTHPVCSFSKIMETSSSSEFPHLLVPKESLCSKFTLLDLRC 970

Query: 121  CTISKADFLKALCKVTPFLSSLFLSGNKF----SCLPKFLSLKNLQIRNDMFLQEIPNLP 162
            C IS  DFL  LCKV PFLSS+ LS NKF    SCL KF+SL NLQ+RN  FLQEIPNLP
Sbjct: 971  CNISNVDFLXILCKVAPFLSSILLSENKFSSLPSCLHKFMSLWNLQLRNCKFLQEIPNLP 1030

BLAST of CmoCh05G008820 vs. TAIR 10
Match: AT4G12010.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 47.4 bits (111), Expect = 1.3e-05
Identity = 49/163 (30.06%), Postives = 77/163 (47.24%), Query Frame = 0

Query: 1   MFPEIAENMKSLVRLDLRFTTIKELPSSISLALVGVLDLKCYPSHGTQLSIQHALLHIVE 60
           +FPEI E+M+SL  L +  T+I E+P  + L+     ++K +   GT   +  ++  +  
Sbjct: 796 VFPEIKEDMESLEILLMDDTSITEMPKMMHLS-----NIKTFSLCGTSSHVSVSMFFMPP 855

Query: 61  TLLSSEFPHLAVSKEPMFYEHHYLVLEICTISK-ADFLKALCKVTPFLSSLFLSGNKFSC 120
           TL  S    L +S+              C++ K  D +  L      L SL LSGN    
Sbjct: 856 TLGCSRLTDLYLSR--------------CSLYKLPDNIGGLSS----LQSLCLSGNNIEN 915

Query: 121 LPK-FLSLKNLQ---IRNDMFLQEIPNLPMCIQELDAISCQPL 159
           LP+ F  L NL+   ++    L+ +P LP  +Q LDA  C+ L
Sbjct: 916 LPESFNQLNNLKWFDLKFCKMLKSLPVLPQNLQYLDAHECESL 935

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SZ661.8e-0430.06Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=... [more]
Match NameE-valueIdentityDescription
A0A6J1G4978.9e-4759.60disease resistance protein RPS6-like OS=Cucurbita moschata OX=3662 GN=LOC1114505... [more]
A0A1S3C0A43.4e-3049.24LOW QUALITY PROTEIN: TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LO... [more]
A0A5A7VCN04.4e-3048.73TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A0A0LLK31.3e-2947.72TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G020890 PE=4 SV... [more]
A0A5D3D4375.6e-2544.95TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
Match NameE-valueIdentityDescription
XP_022946575.11.8e-4659.60disease resistance protein RPS6-like [Cucurbita moschata][more]
KAG6598997.15.4e-4659.09Disease resistance-like protein DSC1, partial [Cucurbita argyrosperma subsp. sor... [more]
XP_023520945.17.0e-4659.39protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like, partial [Cucurbita pepo subsp... [more]
XP_038877735.11.8e-3048.73disease resistance protein RPS6-like, partial [Benincasa hispida][more]
XP_008455171.17.0e-3049.24PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT4G12010.11.3e-0530.06Disease resistance protein (TIR-NBS-LRR class) family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..160
e-value: 3.4E-9
score: 37.6
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 106..127
score: 7.065096
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..155

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G008820.1CmoCh05G008820.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding