CmoCh05G008490 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGCTCCACCCTCTTCAAAAGCCTACCAAAGTTTGGTCATTTTGGGGCACCAGCCATTGCAAGGAGATCACCCACTTCCAACACTTCCCTCCTTTTCGCTTCCAACCCCAAATTTATTCATGTAAGTACGTTCGTTAAAAGGGTAAAAATTGAAGAAGTTAGATATTCGAATCTCACATTTCAGATGATGATGTGATGTTTTTGAAGTTAGATATTCGAATCTTACATTTCAGATGATGATGTGATGTTTTTGAAGTTAGATATTCGAATCTCACATTTCAGATGATGATGTGATGTTTTTGAAGTTAGATATTCGAATCTCACATTTCAGATGATGATGTGATGTTTTTGTGCGTCTTTGACAGACAAATCCACCACAAGATGGGTCAGAAGCCAAAGATGCCATAAACCCAGAGGCGAATGAAGGAATGACACCGGGTGAACATATGATGCAGGACAAGGCTTACTCTACTGCAGAACATGTGATCAAAACTCCCAATTTTTTATTTTATTTTTTAAATCAACTGAATCGAAGCTACGAATGAGAGCGATGTTGAAGATAGATAAGTAAATGGGGAATTTGAAAATGCAGGTGAGTGAGAAGACAAGGGATATGGCAGGGATGCTGAGTGCAAGAGCGCAAGAGGTATCGGCAAAGGCAAAGGAGGCAATGGAAGCAGCAAAGGACTCAGCCCATAGGGCAAAGGACACAGTGGTTGAGACTACCAAAGACTCCAAGCAATTTGTCAAAGCAAATGCAAAGACTGTTGAGAAGTGCATGAACACCAAGAACCGTTCTTAA ATGGGAAGCTCCACCCTCTTCAAAAGCCTACCAAAGTTTGGTCATTTTGGGGCACCAGCCATTGCAAGGAGATCACCCACTTCCAACACTTCCCTCCTTTTCGCTTCCAACCCCAAATTTATTCATGTAAATGATGATACAAATCCACCACAAGATGGGTCAGAAGCCAAAGATGCCATAAACCCAGAGGCGAATGAAGGAATGACACCGGGTGAACATATGATGCAGGACAAGGCTTACTCTACTGCAGAACATGTGAGTGAGAAGACAAGGGATATGGCAGGGATGCTGAGTGCAAGAGCGCAAGAGGTATCGGCAAAGGCAAAGGAGGCAATGGAAGCAGCAAAGGACTCAGCCCATAGGGCAAAGGACACAGTGGTTGAGACTACCAAAGACTCCAAGCAATTTGTCAAAGCAAATGCAAAGACTGTTGAGAAGTGCATGAACACCAAGAACCGTTCTTAA ATGGGAAGCTCCACCCTCTTCAAAAGCCTACCAAAGTTTGGTCATTTTGGGGCACCAGCCATTGCAAGGAGATCACCCACTTCCAACACTTCCCTCCTTTTCGCTTCCAACCCCAAATTTATTCATGTAAATGATGATACAAATCCACCACAAGATGGGTCAGAAGCCAAAGATGCCATAAACCCAGAGGCGAATGAAGGAATGACACCGGGTGAACATATGATGCAGGACAAGGCTTACTCTACTGCAGAACATGTGAGTGAGAAGACAAGGGATATGGCAGGGATGCTGAGTGCAAGAGCGCAAGAGGTATCGGCAAAGGCAAAGGAGGCAATGGAAGCAGCAAAGGACTCAGCCCATAGGGCAAAGGACACAGTGGTTGAGACTACCAAAGACTCCAAGCAATTTGTCAAAGCAAATGCAAAGACTGTTGAGAAGTGCATGAACACCAAGAACCGTTCTTAA MGSSTLFKSLPKFGHFGAPAIARRSPTSNTSLLFASNPKFIHVNDDTNPPQDGSEAKDAINPEANEGMTPGEHMMQDKAYSTAEHVSEKTRDMAGMLSARAQEVSAKAKEAMEAAKDSAHRAKDTVVETTKDSKQFVKANAKTVEKCMNTKNRS Homology
BLAST of CmoCh05G008490 vs. ExPASy Swiss-Prot
Match: Q8LFD5 (Uncharacterized protein At4g13230 OS=Arabidopsis thaliana OX=3702 GN=At4g13230 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.3e-04 Identity = 36/99 (36.36%), Postives = 54/99 (54.55%), Query Frame = 0
BLAST of CmoCh05G008490 vs. ExPASy TrEMBL
Match: A0A6J1F3W7 (uncharacterized protein At4g13230 OS=Cucurbita moschata OX=3662 GN=LOC111439943 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 7.7e-72 Identity = 150/154 (97.40%), Postives = 150/154 (97.40%), Query Frame = 0
BLAST of CmoCh05G008490 vs. ExPASy TrEMBL
Match: A0A6J1ICL4 (uncharacterized protein At4g13230 OS=Cucurbita maxima OX=3661 GN=LOC111472556 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 3.7e-66 Identity = 142/154 (92.21%), Postives = 144/154 (93.51%), Query Frame = 0
BLAST of CmoCh05G008490 vs. ExPASy TrEMBL
Match: A0A6J1CSM2 (uncharacterized protein At4g13230-like OS=Momordica charantia OX=3673 GN=LOC111014202 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 4.4e-35 Identity = 100/158 (63.29%), Postives = 113/158 (71.52%), Query Frame = 0
BLAST of CmoCh05G008490 vs. ExPASy TrEMBL
Match: A0A2N9J2L7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58716 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 6.6e-23 Identity = 78/156 (50.00%), Postives = 107/156 (68.59%), Query Frame = 0
BLAST of CmoCh05G008490 vs. ExPASy TrEMBL
Match: A0A7N2KQQ7 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 6.8e-20 Identity = 76/156 (48.72%), Postives = 101/156 (64.74%), Query Frame = 0
BLAST of CmoCh05G008490 vs. TAIR 10
Match: AT4G13230.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 47.8 bits (112), Expect = 9.4e-06 Identity = 36/99 (36.36%), Postives = 54/99 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|