CmoCh05G008360 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAATATGATGGGTCAAATGTCGCTACCGCGATTAACGAAGACGAACTACGAGAATTGGAGCATCCAAATGAAAGCTCTTCTCGGTTCTCAAGATGCTTGGGAGGTGGTCGAAGAACCAAAGGATACCACGGGTTATATGTTGAGGATTATTGGGATTGGGAGTGTCCCACATTGGTTAATTTAGTGGAAGATCATGGGTTTATAAGTGAGGAATACTATCTTCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGATTCCTAACATTATACAGCAGCGCAAAACAAGGCATTAAAAGAATTACGATCAAAGGATAAGACAACATTATACATGTTGTTCCGGGCTGTTGATGAGTCGTGCTTTGAGAAGATTGTCAGGGCAACTACTTCAAAAAAAGCGTGGAACACTTTAGAAAAGGTGTTCAAAGGAACCGATTGAGTCAAGCAAGTGCGTCTCCAAACTCTGCGTGGCGAGTTGGAGAGCATGAAGATGAAGGAGTCAGAAAATGTATCTAACTACATTACGCGCGTACAGACTGTGACAAATCAACTAAATCGAAATGGAGAAATGTTACCCGAGATGGGGTTGTGGAGAAGATCTTGAGGTCATTAACCAACAACTTCAAGAATGTTGTATGTGCGATAGAAGAGTCAAATGACCTAACGAAGTTCACGGATGATGAGCTCGCCGGTTCTCTTGAGGCACACGAACAACGTAAGAAAAAGAAGGAGACACTCGATCAAGCGCTTCAGACCAAGGCATCAATAAAAGATGAAAAGGTATGCTCTCAAAATATTCAAGGTAGAGGTCGTGGAAGTCGCGGGAATGGTCGAGGTGGTCAAGGCAGCAGAAATGAAGGACAGTCAAGTCAAGCAAATTGGCGTGGAAGAGGATGTAGTCGAGGAAGAGGCGGCCGATAAATGGTCAAGGCAGCAGAAATGAAGGACAGTCAAGTCAAGCAAATTGGCGTGGAAGAGGATGTAGTCGAGTCGAGGAAGAGGCGGCCGATAAATGGTCAAGGCAGCAGAAATGAAGGACAGTCAAGTCAAGCAAATTGGCGTGGAAGAGGATGTAGTCGAGGAAGAGGCGGCCGATAAAAAATTCAGTGCTACAAATGTAAAAAATATGGCCACTATGCGAATGATTGTAGCTCCAAAAAATATTACAATTGTGGCAGAGTGGGGCACATGTTGCAAAAGATTGTTGAGCTGGAAAAAGGGTGGAAGGAGCAACCAACCTAGCCTTGGAAGACGTAACAAATGAAGGCCTTCTCTTGATGGCTCAAGAAGACAACATCAACAATGACACTCTGTGGTATGTGCAGTCACAAGTACTTATTCAAAGAGATGCACAAGATTGAAGATGGTCATGTGTCATTTGGAGATGCGTCAAAGGTGGAGGTCAAAGACTGAGGTACAATACATTTTCTTGCAAAAGGATGGTCTAATGGGGTCAATCCAAGTGTTTATTACGTACCAGACCTCAAGATCAACATATTGAGTATGGGGCAACTCACAGAGAAAGATTACTCGATATTCTTAAAGGACCCACCTGCTACACCTGAAGGATAAGCAAGGGTGTTTAGTTGCTCAAGTTGAGATAGGAAGAAATCGAATGTACAAATTGAACTCAAGTCCACCATACCTAAATGGTGTGTTAAATGGTGTGAAATTCTCTATTTATGATCAAATAAATTATAAGGATACTAAAAGAATAATAAAAGAAGAGAGCAACAAATACTTAGGGTAAAAAGACAAATATCTAGATATTTGCCTATAATAAAATATCAAATATGATATATATGGTAAACTATAATTTAGTACATAAAATATCAAATATGATATATATGGTAAACTATAATTTAGTACATAAAATATCAAATATGATATATATGGTAAACTATAATTTAGTACTAAATATCCTTAACACCCCCACAAGCTAAGCGTCGGATTTGAACGAACGTGCAGCTTGGATCCGAAAAATTCAAAGAGAGGTCGAGAAACACTCTTCATGAAGATGTCAACAACCTGGTTCAAAGGAGGCGTAGAGAAATACTTGGTTGGCGAAGAGGCCAGTGCGGCGCCCAGATTCCAAAGGTAAATCTCTGTAGAAGGTCGATGGGCTTATCGAGATTCCATATATTTTCGAAGAAAACGCTGATGAGGATCTTGAGATTAGGGTTTCTGTGAAGGATGAAGGGTTGATTGGGAAGAAAATGAGACAGGCTATGTTGGCTAAGAGGAAACCGATTGTGTTGGAGAAAGTGAGGTTGTATGTATAGAGTATGCCAAATGGTGATTTGGAGATTAAAAAGGTGGAGATGAAGAGTAATAAATCGACTTCGCATTTGGCAGCCATGGAGACTGCCCCTGCAGCGTCAAAGCCAGCAGTGGTGGTGGGGAAGAACAATAG ATGGCGAATATGATGGGTCAAATGTCGCTACCGCGATTAACGAAGACGAACTACGAGAATTGGAGCATCCAAATGAAAGCTCTTCTCGGTTCTCAAGATGCTTGGGAGGTGGTCGAAGAACCAAAGGATACCACGGACTGTGACAAATCAACTAAATCGAAATGGAGAAATGTTACCCGAGATGGGGTTGTGGAGAAGATCTTGAGGTCATTAACCAACAACTTCAAGAATGTTGTATGTGCGATAGAAGAGTCAAATGACCTAACGAAGTTCACGGATGATGAGCTCGCCGGTTCTCTTGAGGCACACGAACAACGTAAGAAAAAGAAGGAGACACTCGATCAAGCGCTTCAGACCAAGGCATCAATAAAAGATGAAAAGCTTGGATCCGAAAAATTCAAAGAGAGGTCGAGAAACACTCTTCATGAAGATGTCAACAACCTGGTTCAAAGGAGGCGTAGAGAAATACTTGGTTGGCGAAGAGGCCAGTGCGGCGCCCAGATTCCAAAGGATGAAGGGTTGATTGGGAAGAAAATGAGACAGGCTATGTTGGCTAAGAGGAAACCGATTGTGTTGGAGAAAGTGAGCCATGGAGACTGCCCCTGCAGCGTCAAAGCCAGCAGTGGTGGTGGGGAAGAACAATAG ATGGCGAATATGATGGGTCAAATGTCGCTACCGCGATTAACGAAGACGAACTACGAGAATTGGAGCATCCAAATGAAAGCTCTTCTCGGTTCTCAAGATGCTTGGGAGGTGGTCGAAGAACCAAAGGATACCACGGACTGTGACAAATCAACTAAATCGAAATGGAGAAATGTTACCCGAGATGGGGTTGTGGAGAAGATCTTGAGGTCATTAACCAACAACTTCAAGAATGTTGTATGTGCGATAGAAGAGTCAAATGACCTAACGAAGTTCACGGATGATGAGCTCGCCGGTTCTCTTGAGGCACACGAACAACGTAAGAAAAAGAAGGAGACACTCGATCAAGCGCTTCAGACCAAGGCATCAATAAAAGATGAAAAGCTTGGATCCGAAAAATTCAAAGAGAGGTCGAGAAACACTCTTCATGAAGATGTCAACAACCTGGTTCAAAGGAGGCGTAGAGAAATACTTGGTTGGCGAAGAGGCCAGTGCGGCGCCCAGATTCCAAAGGATGAAGGGTTGATTGGGAAGAAAATGAGACAGGCTATGTTGGCTAAGAGGAAACCGATTGTGTTGGAGAAAGTGAGCCATGGAGACTGCCCCTGCAGCGTCAAAGCCAGCAGTGGTGGTGGGGAAGAACAATAG MANMMGQMSLPRLTKTNYENWSIQMKALLGSQDAWEVVEEPKDTTDCDKSTKSKWRNVTRDGVVEKILRSLTNNFKNVVCAIEESNDLTKFTDDELAGSLEAHEQRKKKKETLDQALQTKASIKDEKLGSEKFKERSRNTLHEDVNNLVQRRRREILGWRRGQCGAQIPKDEGLIGKKMRQAMLAKRKPIVLEKVSHGDCPCSVKASSGGGEEQ Homology
BLAST of CmoCh05G008360 vs. ExPASy TrEMBL
Match: A0A6J1GR21 (uncharacterized protein LOC111456728 OS=Cucurbita moschata OX=3662 GN=LOC111456728 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 3.0e-34 Identity = 98/168 (58.33%), Postives = 107/168 (63.69%), Query Frame = 0
BLAST of CmoCh05G008360 vs. ExPASy TrEMBL
Match: A0A6J1ICK8 (uncharacterized protein LOC111474389 OS=Cucurbita maxima OX=3661 GN=LOC111474389 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 3.5e-30 Identity = 107/231 (46.32%), Postives = 122/231 (52.81%), Query Frame = 0
BLAST of CmoCh05G008360 vs. ExPASy TrEMBL
Match: A0A6J1F7M5 (uncharacterized protein LOC111442874 OS=Cucurbita moschata OX=3662 GN=LOC111442874 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 3.6e-27 Identity = 93/174 (53.45%), Postives = 103/174 (59.20%), Query Frame = 0
BLAST of CmoCh05G008360 vs. ExPASy TrEMBL
Match: A0A151RNB3 (CCHC-type domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_034467 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.8e-26 Identity = 99/197 (50.25%), Postives = 112/197 (56.85%), Query Frame = 0
BLAST of CmoCh05G008360 vs. ExPASy TrEMBL
Match: A0A6A3AD07 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110483pilonHSYRG00411 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.3e-26 Identity = 102/235 (43.40%), Postives = 114/235 (48.51%), Query Frame = 0
BLAST of CmoCh05G008360 vs. TAIR 10
Match: AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06 Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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