CmoCh05G008280 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G008280
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr05: 5047884 .. 5050449 (-)
RNA-Seq ExpressionCmoCh05G008280
SyntenyCmoCh05G008280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCTTTCAACCTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTAACCTTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACTGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCACCGCCATCTTCCAAGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACGGTGATTCTGAAATTGGGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAGTGGATCGTCCTGGTTCTTGCGTTTTGGTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGTGGAGAGGATCTGAAGAGGAGTGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGTTTAGGAATACTTCCTTGTATTCCGTTGCATGCTTTTCATTTGTTGTTCATTCAATTTGTGATTCATATTCATTCGTATGTGTTCTTTCCTAGTTCGCTGTATGATTTATGAGGGAGTAATCATATAATATACCATTCCTTACATTTTTCAAACCTTTTTCCAACTACTATGCTTAGTTTCCAAGTGTTAACATCACACAACAACACACACTCCATATGAACACACAAAGGATAGAAGAGAGAAAACGCAAAGAAAAATATTGGCTAAAGATTTATATTGATGACTTCAAGTATGGATCCGAGAACATAGAGAATGCAGAAAGACGGATATATGAAACCATATATATATATATATCCTTTTGAGCTAAAAACATTTTTCTCTGGCTTCTGCATCTTTTGCAAAGTTTTTATTTCCTTTCTCTTTTCAAACACTTCAGGGTTCAATCAACAACAGGATTTACAGATATAAGGAAGGGGACAGACAATGGATCATAGAACAAAAGCTGGTAAAAAATGATCTTGGACGGCTGAACAGGTACCTTTTTCAATACTTTTTGTTCTTCTGGGGTAATATCCTCTTAATCTGCATATATATAAGATCGTGCATACTGTTGAGTAAGATCGAACACCAGAATCAAAATGAACAAACTGAAATAATCACTGAGAATCTCAAACATAATCAAAATTTTGTTCTATATCAGAGACAGACAACTAAAGAATTCTATTCCAGAACACTATGCAGATCCATGCATGTTTGAAGTATTTGAAAGAACAAAACTCAAAAGAAAACTTGAAAGAACAAGAAGTGACCAACTATTAAAAGCATCTATGTATCAAAATTTTGAAATCTATGAGTCAAATTTAGAACCAATTCACCAACCTGCCATCGGTTTAAACAAAATCAGATATTTGGTATATTGGGGAACAAATTTAGATACCCTGTGAGCAGGACTGAATAGCTGATACCTGTTAAATGAGATATTGTCATTGTCAAGGATCAAGTATTAACAAGTACAAGAGAAGCATGTAAACTATAAAGATTCAAGACATCGTAATGCAAAGACTTAAGAAATATGCATTCCTCAGCAACATCACATCAATTAAGCTTTAAAACTCCCACAAGGAAAACAAGTTCAATAAAATAGTTCATATGAAAGAAAACTTGCATACTTCAGAAGAAGAGTATAAATATGTTAAAACACATTCATCACTTATATCAAACCAATTATATGTTCTTCCAGCATCTGTAGTTTGTTCTTGCCTACCATCTGCAAGCCTCTCCTTACCCCAATTCATCATCATTAGCTGATTTTCTGGCAGTTGAAAGTGTAAGTTCCTTAAGTATTTCAGCCATTGGCTTCTGACGAATGCCCCAATGGCTTTTTCCTCTTGAACGAATTGAATGATCTATGGAGCGCCAAGAAGACATGCCGCCTGAAAGTAGAATATTTCTTAAATGTATGACCGTATAAAGAAAATGAATACATGCGGATATCAGCAAGAATCATCTCATCACTTGAGGAAAGTGTGCAGTCCATTAACTGCGTGCAAGCCTCCAGCAATGGAACTGATGTAGTCAATTCAGTTGTTGATTGATTATTTTGGCGACGGACTTGATGAATTTCCTCTAAGGAAACGATTCATGAAGGAAGCTTGGTTCAGTAAAGAAATATGATCTTTATGTTCAGCTTCTTCCTTCTCTTTGCGACGTTGTTCTTTTTCAGCGTCAATCTCTTTTTTTTTTTGACGTTTTTCTTCCCTTTCTTTCACTTTTAACTCCCTTTCCTGATTTTAAATGAATTGTGCAGGAAAGTCACTTGAAAAGCCCAAGAGCAGAAAGACAATCAAATTTTGAATCACATAAGTTCTTCTTACCCTTTGCAACCTTTCCTTTTTTTGTTCCTTCTCTGTTCTCTGTTTCTCCTTTTCAGCCTCCCGCTGATTTCTCTTTATTTGTTTGACCATCAGCTTCTCTTCTCGTTCTACTTCCTTCTCAGTCCTAAAATAAGAAGTTAA

mRNA sequence

ATGGGCCTTTCAACCTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTAACCTTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACTGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCACCGCCATCTTCCAAGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACGGTGATTCTGAAATTGGGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAGTGGATCGTCCTGGTTCTTGCGTTTTGGTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGTGGAGAGGATCTGAAGAGGAGTGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGGTTCAATCAACAACAGGATTTACAGATATAAGGAAGGGGACAGACAATGGATCATAGAACAAAAGCTGGTAAAAAATGATCTTGGACGGCTGAACAGAGACAGACAACTAAAGAATTCTATTCCAGAACACTATGCAGATCCATGCATGTTTGAATTTGTTCTTGCCTACCATCTGCAAGCCTCTCCTTACCCCAATTCATCATCATTAGCTGATTTTCTGGCAGTTGAAAGTCCATTGGCTTCTGACGAATGCCCCAATGGCTTTTTCCTCTTGAACGAATTGAATGATCTATGGAGCGCCAAGAAGACATGCCGCCTGAAAGTAGAATATTTCTTAAATCTTCTCTTCTCGTTCTACTTCCTTCTCAGTCCTAAAATAAGAAGTTAA

Coding sequence (CDS)

ATGGGCCTTTCAACCTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTAACCTTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACTGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCACCGCCATCTTCCAAGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACGGTGATTCTGAAATTGGGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAGTGGATCGTCCTGGTTCTTGCGTTTTGGTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGTGGAGAGGATCTGAAGAGGAGTGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGGTTCAATCAACAACAGGATTTACAGATATAAGGAAGGGGACAGACAATGGATCATAGAACAAAAGCTGGTAAAAAATGATCTTGGACGGCTGAACAGAGACAGACAACTAAAGAATTCTATTCCAGAACACTATGCAGATCCATGCATGTTTGAATTTGTTCTTGCCTACCATCTGCAAGCCTCTCCTTACCCCAATTCATCATCATTAGCTGATTTTCTGGCAGTTGAAAGTCCATTGGCTTCTGACGAATGCCCCAATGGCTTTTTCCTCTTGAACGAATTGAATGATCTATGGAGCGCCAAGAAGACATGCCGCCTGAAAGTAGAATATTTCTTAAATCTTCTCTTCTCGTTCTACTTCCTTCTCAGTCCTAAAATAAGAAGTTAA

Protein sequence

MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREESGTVILKLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAPPFPGSINNRIYRYKEGDRQWIIEQKLVKNDLGRLNRDRQLKNSIPEHYADPCMFEFVLAYHLQASPYPNSSSLADFLAVESPLASDECPNGFFLLNELNDLWSAKKTCRLKVEYFLNLLFSFYFLLSPKIRS
Homology
BLAST of CmoCh05G008280 vs. ExPASy TrEMBL
Match: A0A6J1F3Y9 (uncharacterized protein LOC111440012 OS=Cucurbita moschata OX=3662 GN=LOC111440012 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 2.0e-95
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0

Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF
Sbjct: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES
Sbjct: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120

Query: 121 GTVILKLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP 180
           GTVILKLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP
Sbjct: 121 GTVILKLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP 180

Query: 181 PFP 184
           PFP
Sbjct: 181 PFP 183

BLAST of CmoCh05G008280 vs. ExPASy TrEMBL
Match: A0A6J1K9N5 (uncharacterized protein LOC111491920 OS=Cucurbita maxima OX=3661 GN=LOC111491920 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 3.2e-93
Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0

Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF
Sbjct: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES
Sbjct: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120

Query: 121 GTVILKLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP 180
           GTVILKL GGLSGLIFCLEWIVLVLAF LKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP
Sbjct: 121 GTVILKLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP 180

Query: 181 PFP 184
           PFP
Sbjct: 181 PFP 183

BLAST of CmoCh05G008280 vs. ExPASy TrEMBL
Match: A0A0A0LHB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G083760 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 2.7e-84
Identity = 162/183 (88.52%), Postives = 174/183 (95.08%), Query Frame = 0

Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLS SSSTSIS +HYNIH LFLLCNY+LLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIAGA+SGCAMASA+TGRW+GVHMVFTVLTAIFQGS+TVLV+TRTA+FLGELKSYVREE 
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120

Query: 121 GTVILKLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP 180
           G+VILKLGGGLSGLIFCLEW+VLVLAF LKYY+YVEGNG+GE LKRS KVQQFEDS WA 
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAA 180

Query: 181 PFP 184
           PFP
Sbjct: 181 PFP 183

BLAST of CmoCh05G008280 vs. ExPASy TrEMBL
Match: A0A5A7UCF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00280 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 4.6e-84
Identity = 160/183 (87.43%), Postives = 174/183 (95.08%), Query Frame = 0

Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLS SSSTS+SR+HYNIH LFLLCNY+LLGAASSCIFLTLSLRL+PSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSVSRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAF 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIAGA+SGCAMASA+TGRW+GVHMVFTVLTAIFQGS+TVLV+TRT +FLGELKSYVREE 
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGDFLGELKSYVREED 120

Query: 121 GTVILKLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP 180
           G+VILKLGGGLSGLIFCLEW+VLVLAF LKYY+YVEGNG+GE LKRS KVQQFEDS WA 
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAA 180

Query: 181 PFP 184
           PFP
Sbjct: 181 PFP 183

BLAST of CmoCh05G008280 vs. ExPASy TrEMBL
Match: A0A5D3DJ66 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold65819G00010 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.1e-82
Identity = 160/184 (86.96%), Postives = 174/184 (94.57%), Query Frame = 0

Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLS SSSTS+SR+HYNIH LFLLCNY+LLGAASSCIFLTLSLRL+PSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSVSRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAF 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIAGA+SGCAMASA+TGRW+GVHMVFTVLTAIFQGS+TVLV+TRT +FLGELKSYVREE 
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGDFLGELKSYVREED 120

Query: 121 GTVILKLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGN-GSGEDLKRSGKVQQFEDSKWA 180
           G+VILKLGGGLSGLIFCLEW+VLVLAF LKYY+YVEGN G+GE LKRS KVQQFEDS WA
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGGNGEGLKRSAKVQQFEDSTWA 180

Query: 181 PPFP 184
            PFP
Sbjct: 181 APFP 184

BLAST of CmoCh05G008280 vs. TAIR 10
Match: AT5G16250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 225.7 bits (574), Expect = 5.1e-59
Identity = 117/178 (65.73%), Postives = 139/178 (78.09%), Query Frame = 0

Query: 6   SSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGA 65
           SSS+ +  +HY+ H +FL  NY+LLGAASSCIFLTLSLRL+PS+CGF +I LHA TIA A
Sbjct: 5   SSSSPVEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATTIAAA 64

Query: 66  ISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 125
           +SGCA AS    RWY  HMV TVLTAIFQGS++VL++T T+ FLG LKSYVREE   VIL
Sbjct: 65  VSGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDAAVIL 124

Query: 126 KLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKVQQFEDSK-WAPPF 183
           KLGGGL  +IFCL+WIVLV AF+LKYY YV+G G G  +KR+GKVQ  E+ K W  PF
Sbjct: 125 KLGGGLCIVIFCLDWIVLVCAFFLKYYAYVDG-GDGVAMKRTGKVQSEENPKDWPWPF 181

BLAST of CmoCh05G008280 vs. TAIR 10
Match: AT3G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16250.1); Has 96 Blast hits to 96 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 222.6 bits (566), Expect = 4.3e-58
Identity = 115/180 (63.89%), Postives = 138/180 (76.67%), Query Frame = 0

Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGL      SI  +HY  H LFL  NYVLLGA+SSCIFLTLSLRL+PS+CGFF+I LHA 
Sbjct: 1   MGLIPQPQESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHAT 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIA A+SGCA AS    RWY  HM+ TVLTAIFQGS++VL++T T+NFL  L SYVRE+ 
Sbjct: 61  TIAAAVSGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREKE 120

Query: 121 GTVILKLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP 180
            ++ILKL GGL  +IFCLEWIVLVLAF+LKYY YV+G+ +G  +KR+GKVQ  E  K +P
Sbjct: 121 ASMILKLAGGLCVVIFCLEWIVLVLAFFLKYYAYVDGDNNGVAMKRTGKVQSEETLKNSP 180

BLAST of CmoCh05G008280 vs. TAIR 10
Match: AT5G36800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 179.5 bits (454), Expect = 4.2e-45
Identity = 104/179 (58.10%), Postives = 133/179 (74.30%), Query Frame = 0

Query: 11  ISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAISGCA 70
           +S++  N HN+FLLCNY+LLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA A+SGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 71  M-----ASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 130
           +     ++ A+ R YG HMV TVLTAIFQG+++VL++TRT +FL  LKSYVREE G VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 131 KLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKV-QQFEDSKWAPPFP 184
           KL GGL  L+FCLEWIVLVLAF LKY  Y++ +   +D     KV +Q ED K  P +P
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDD---DFKVRRQEEDLKDWPSYP 178

BLAST of CmoCh05G008280 vs. TAIR 10
Match: AT5G36710.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 179.5 bits (454), Expect = 4.2e-45
Identity = 104/179 (58.10%), Postives = 133/179 (74.30%), Query Frame = 0

Query: 11  ISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAISGCA 70
           +S++  N HN+FLLCNY+LLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA A+SGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 71  M-----ASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 130
           +     ++ A+ R YG HMV TVLTAIFQG+++VL++TRT +FL  LKSYVREE G VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 131 KLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKV-QQFEDSKWAPPFP 184
           KL GGL  L+FCLEWIVLVLAF LKY  Y++ +   +D     KV +Q ED K  P +P
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDD---DFKVRRQEEDLKDWPSYP 178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1F3Y92.0e-95100.00uncharacterized protein LOC111440012 OS=Cucurbita moschata OX=3662 GN=LOC1114400... [more]
A0A6J1K9N53.2e-9398.91uncharacterized protein LOC111491920 OS=Cucurbita maxima OX=3661 GN=LOC111491920... [more]
A0A0A0LHB32.7e-8488.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G083760 PE=4 SV=1[more]
A0A5A7UCF04.6e-8487.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DJ661.1e-8286.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT5G16250.15.1e-5965.73unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G02640.14.3e-5863.89unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G36800.14.2e-4558.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT5G36710.14.2e-4558.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34124F16B3.27 PROTEIN-RELATEDcoord: 5..181
NoneNo IPR availablePANTHERPTHR34124:SF2F16B3.27 PROTEIN-RELATEDcoord: 5..181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G008280.1CmoCh05G008280.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane