CmoCh05G008280 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCTTTCAACCTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTAACCTTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACTGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCACCGCCATCTTCCAAGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACGGTGATTCTGAAATTGGGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAGTGGATCGTCCTGGTTCTTGCGTTTTGGTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGTGGAGAGGATCTGAAGAGGAGTGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGTTTAGGAATACTTCCTTGTATTCCGTTGCATGCTTTTCATTTGTTGTTCATTCAATTTGTGATTCATATTCATTCGTATGTGTTCTTTCCTAGTTCGCTGTATGATTTATGAGGGAGTAATCATATAATATACCATTCCTTACATTTTTCAAACCTTTTTCCAACTACTATGCTTAGTTTCCAAGTGTTAACATCACACAACAACACACACTCCATATGAACACACAAAGGATAGAAGAGAGAAAACGCAAAGAAAAATATTGGCTAAAGATTTATATTGATGACTTCAAGTATGGATCCGAGAACATAGAGAATGCAGAAAGACGGATATATGAAACCATATATATATATATATCCTTTTGAGCTAAAAACATTTTTCTCTGGCTTCTGCATCTTTTGCAAAGTTTTTATTTCCTTTCTCTTTTCAAACACTTCAGGGTTCAATCAACAACAGGATTTACAGATATAAGGAAGGGGACAGACAATGGATCATAGAACAAAAGCTGGTAAAAAATGATCTTGGACGGCTGAACAGGTACCTTTTTCAATACTTTTTGTTCTTCTGGGGTAATATCCTCTTAATCTGCATATATATAAGATCGTGCATACTGTTGAGTAAGATCGAACACCAGAATCAAAATGAACAAACTGAAATAATCACTGAGAATCTCAAACATAATCAAAATTTTGTTCTATATCAGAGACAGACAACTAAAGAATTCTATTCCAGAACACTATGCAGATCCATGCATGTTTGAAGTATTTGAAAGAACAAAACTCAAAAGAAAACTTGAAAGAACAAGAAGTGACCAACTATTAAAAGCATCTATGTATCAAAATTTTGAAATCTATGAGTCAAATTTAGAACCAATTCACCAACCTGCCATCGGTTTAAACAAAATCAGATATTTGGTATATTGGGGAACAAATTTAGATACCCTGTGAGCAGGACTGAATAGCTGATACCTGTTAAATGAGATATTGTCATTGTCAAGGATCAAGTATTAACAAGTACAAGAGAAGCATGTAAACTATAAAGATTCAAGACATCGTAATGCAAAGACTTAAGAAATATGCATTCCTCAGCAACATCACATCAATTAAGCTTTAAAACTCCCACAAGGAAAACAAGTTCAATAAAATAGTTCATATGAAAGAAAACTTGCATACTTCAGAAGAAGAGTATAAATATGTTAAAACACATTCATCACTTATATCAAACCAATTATATGTTCTTCCAGCATCTGTAGTTTGTTCTTGCCTACCATCTGCAAGCCTCTCCTTACCCCAATTCATCATCATTAGCTGATTTTCTGGCAGTTGAAAGTGTAAGTTCCTTAAGTATTTCAGCCATTGGCTTCTGACGAATGCCCCAATGGCTTTTTCCTCTTGAACGAATTGAATGATCTATGGAGCGCCAAGAAGACATGCCGCCTGAAAGTAGAATATTTCTTAAATGTATGACCGTATAAAGAAAATGAATACATGCGGATATCAGCAAGAATCATCTCATCACTTGAGGAAAGTGTGCAGTCCATTAACTGCGTGCAAGCCTCCAGCAATGGAACTGATGTAGTCAATTCAGTTGTTGATTGATTATTTTGGCGACGGACTTGATGAATTTCCTCTAAGGAAACGATTCATGAAGGAAGCTTGGTTCAGTAAAGAAATATGATCTTTATGTTCAGCTTCTTCCTTCTCTTTGCGACGTTGTTCTTTTTCAGCGTCAATCTCTTTTTTTTTTTGACGTTTTTCTTCCCTTTCTTTCACTTTTAACTCCCTTTCCTGATTTTAAATGAATTGTGCAGGAAAGTCACTTGAAAAGCCCAAGAGCAGAAAGACAATCAAATTTTGAATCACATAAGTTCTTCTTACCCTTTGCAACCTTTCCTTTTTTTGTTCCTTCTCTGTTCTCTGTTTCTCCTTTTCAGCCTCCCGCTGATTTCTCTTTATTTGTTTGACCATCAGCTTCTCTTCTCGTTCTACTTCCTTCTCAGTCCTAAAATAAGAAGTTAA ATGGGCCTTTCAACCTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTAACCTTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACTGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCACCGCCATCTTCCAAGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACGGTGATTCTGAAATTGGGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAGTGGATCGTCCTGGTTCTTGCGTTTTGGTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGTGGAGAGGATCTGAAGAGGAGTGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGGTTCAATCAACAACAGGATTTACAGATATAAGGAAGGGGACAGACAATGGATCATAGAACAAAAGCTGGTAAAAAATGATCTTGGACGGCTGAACAGAGACAGACAACTAAAGAATTCTATTCCAGAACACTATGCAGATCCATGCATGTTTGAATTTGTTCTTGCCTACCATCTGCAAGCCTCTCCTTACCCCAATTCATCATCATTAGCTGATTTTCTGGCAGTTGAAAGTCCATTGGCTTCTGACGAATGCCCCAATGGCTTTTTCCTCTTGAACGAATTGAATGATCTATGGAGCGCCAAGAAGACATGCCGCCTGAAAGTAGAATATTTCTTAAATCTTCTCTTCTCGTTCTACTTCCTTCTCAGTCCTAAAATAAGAAGTTAA ATGGGCCTTTCAACCTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTAACCTTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACTGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCACCGCCATCTTCCAAGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACGGTGATTCTGAAATTGGGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAGTGGATCGTCCTGGTTCTTGCGTTTTGGTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGTGGAGAGGATCTGAAGAGGAGTGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGGTTCAATCAACAACAGGATTTACAGATATAAGGAAGGGGACAGACAATGGATCATAGAACAAAAGCTGGTAAAAAATGATCTTGGACGGCTGAACAGAGACAGACAACTAAAGAATTCTATTCCAGAACACTATGCAGATCCATGCATGTTTGAATTTGTTCTTGCCTACCATCTGCAAGCCTCTCCTTACCCCAATTCATCATCATTAGCTGATTTTCTGGCAGTTGAAAGTCCATTGGCTTCTGACGAATGCCCCAATGGCTTTTTCCTCTTGAACGAATTGAATGATCTATGGAGCGCCAAGAAGACATGCCGCCTGAAAGTAGAATATTTCTTAAATCTTCTCTTCTCGTTCTACTTCCTTCTCAGTCCTAAAATAAGAAGTTAA MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREESGTVILKLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAPPFPGSINNRIYRYKEGDRQWIIEQKLVKNDLGRLNRDRQLKNSIPEHYADPCMFEFVLAYHLQASPYPNSSSLADFLAVESPLASDECPNGFFLLNELNDLWSAKKTCRLKVEYFLNLLFSFYFLLSPKIRS Homology
BLAST of CmoCh05G008280 vs. ExPASy TrEMBL
Match: A0A6J1F3Y9 (uncharacterized protein LOC111440012 OS=Cucurbita moschata OX=3662 GN=LOC111440012 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 2.0e-95 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of CmoCh05G008280 vs. ExPASy TrEMBL
Match: A0A6J1K9N5 (uncharacterized protein LOC111491920 OS=Cucurbita maxima OX=3661 GN=LOC111491920 PE=4 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 3.2e-93 Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of CmoCh05G008280 vs. ExPASy TrEMBL
Match: A0A0A0LHB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G083760 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 2.7e-84 Identity = 162/183 (88.52%), Postives = 174/183 (95.08%), Query Frame = 0
BLAST of CmoCh05G008280 vs. ExPASy TrEMBL
Match: A0A5A7UCF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00280 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 4.6e-84 Identity = 160/183 (87.43%), Postives = 174/183 (95.08%), Query Frame = 0
BLAST of CmoCh05G008280 vs. ExPASy TrEMBL
Match: A0A5D3DJ66 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold65819G00010 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 1.1e-82 Identity = 160/184 (86.96%), Postives = 174/184 (94.57%), Query Frame = 0
BLAST of CmoCh05G008280 vs. TAIR 10
Match: AT5G16250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 225.7 bits (574), Expect = 5.1e-59 Identity = 117/178 (65.73%), Postives = 139/178 (78.09%), Query Frame = 0
BLAST of CmoCh05G008280 vs. TAIR 10
Match: AT3G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16250.1); Has 96 Blast hits to 96 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 222.6 bits (566), Expect = 4.3e-58 Identity = 115/180 (63.89%), Postives = 138/180 (76.67%), Query Frame = 0
BLAST of CmoCh05G008280 vs. TAIR 10
Match: AT5G36800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 179.5 bits (454), Expect = 4.2e-45 Identity = 104/179 (58.10%), Postives = 133/179 (74.30%), Query Frame = 0
BLAST of CmoCh05G008280 vs. TAIR 10
Match: AT5G36710.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 179.5 bits (454), Expect = 4.2e-45 Identity = 104/179 (58.10%), Postives = 133/179 (74.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|