CmoCh05G008010 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G008010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Isopentenyl-diphosphate Delta-isomerase
Location	Cmo_Chr05: 4678690 .. 4684997 (+)
RNA-Seq Expression	CmoCh05G008010
Synteny	CmoCh05G008010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGAGACAGCGGGGCCGTTGTTCACACCACCTCCGATCTTCTTCAAAAGGCGATTTGCAGGTCATTTGATCCTCAAATGGTGGATTCCCCAATTCCCCAATGTTTCTAATAACCTCTCACCTCCTCAAAACCCCTCTCTCTTTCCCCCCTCCCATTTCCTTCTCTTCCAAATGTCGTTTCGCTTCTTCTGTTTCCGCCCCTCGCACCCTCTTCGCTAGGGTCTCCCGCTGCTCTCTCTCCACCAACACTACCATGGATTCCGCTGCTGATGCTTCCATGGATGCCGTCCAGAGGCGCCTTATGTTCGATGACGAGTGCGTTTCTTCTTAATTCCCCTTCCCTTCCCGATTTCTGTTCTGGGTTTCTTTTGTTTCGTCTTAATTTTGAATTCTTTTTGTTTGCTTGAGTTCTTTTGATTTCCGTTTCTACCATGGATGCTGATCTTTGTCTTCTTATTGTTGTTTGGCTTCTGGAAGGAGTTCCATTGTTTTGTTAAATTGCTGAGGATTCTGTTTTCTAGCCGTATAAAAGCTTTGTCTAGTTTGAGAGTTTTATGAATGCAGAAGTTCATTGTTCATGGATGGTTGTGAATGTCTAAATATTTGGCAGGCCAGGAGTAAGAAATTGCTACTTGCTGCTCTACTCTAAGAATCCAGCCATTTAAGTGTGGCTATTGGTTAAATCTTTGAAATTAATCAAGCTTGAGGGCTTTGGTGGAACCCACATTGAATTAAATTAAGGGTTCTTTGTGTTTATCAGCAAATTCCATATTGGTGAAGTTAAGTTTGAATTAATGGTGCATGAGCTAAGGTAGATGGCCATTTGTTAGTCACATGGACAAGAATTCAAAGGCACCTTATTGTGAACCATGGTGGCCATATGAGAAATTATTGGATATTTGTGATACCAAAATCTAGATACCCCACATTTACCTACAGTCCTATATATTGAAACTTTCTATATCACTATTCATTTAGGATTAGTTTAATTTATCTTTGCATATGAACTTACTCTTTCTGCCTAGTGATTTTCATTTCAAGATTGACTTCCAAGCTCAATTTTATTCGCCTTGTTTTCTTGTTACTTTTCTTCTTTCTTTAGAGATTTCTATCATTGTGCTCTGATTGATTAATGGCGTAATCATGCCAGAAATTGATGAATTCTCTTTAATTGAAACCTTGCAGATGCATTCTGGTGGATGAAAGTGATAATATTGTTGGTCACGATTCTAAATATAATTGTAAGTACTGCCTGGGTAACCCTCATTTTGTTTATTATGTTATGTATCTTTAAGCAGACTTTTAAACCTCGAACCCAGCGAGGCAAAAAGGGTTTGTTTATCGATTGACTCATTATTTTTGTATTTTGAACAAATAAGTATGTTATACTTTTTTTTCAAATGGACGTGGATGTAAATGTTCTGTACCCCTTGTATTTCCACCTCGCTTCTCCTCCTTTTCCCCTAATTAAGCTATGAATTTGTAGGATTTCAACTTAAAATATCGATGAGGCATTGCAAAGCACCTATTTCTCCTTGTGTTTCTTCTTGTTGTTCAAACTTTTATTCTGATCATCTTGTTTTCTTTTTGGTCTTATAATTTGTAGGTCACTTGATGGATAATATTGAGTCAAACAAAGCACTCCATAGAGCCTTCAGTGTCTTCTTATTTAACAATAAATTTGAGTTGCTTCTTCAGGTATGTAGTTACAATAATTTGGATCTTAATGTGTATACTTCCAGCATGGGGTTGCATGTTCTCTTCCGTTTTTTTAGACCATCTCCAACCATTAATTAACTCATACTAAAACCATCTTCATTTTGTTTCCTTCCCCAAAAGGAAGAATTAAAAAACGTACTAAAGGAGATAAAAGCTGGCTCTTTTCTTGACACTTGAACAGCTTCTGCCTATACCAAATACACAAATAGAACGCATGACATTAGACCAGGTGAGAACGAGCAATGGAACTCAAAATGAACTTCCCGCGTGATCTCATGCTTCAGCGCATGGAAGTGGCGATGGACCACTTATCCTCATGTGTGACATGTGCGGCTTATTCAAGCAAACAGCCAATGAAACTTATCTCTCTTTAGCTCTACCTGGGATTGGTGGTGTTGACAAAAGGCCACCTCGAAGTGATGGCCTAAATTTCAAACCATAGCATCACTTGAAAGAAATTCATAACAACCACAGAGAATTCAAAATGATGTTGTAATAACCTATGATATAATACTGTTTTAGTATTTCTTATATTTCTTACAGACACTTAGGCATGCATGAAAGTCATGAACCAAAAGGGAAAAGGACTGATAAATCCCTAGATCTAATGCATTTACACTGGCATACATATAATATATGCTGTAACAAACTTTTTTTTTCTTCTTTTTTTGTTAGCAACGTTCTGCGACAAAAGTAACATTCCCCCTTGTTTGGACGAACACCTGCTGCAGCCATCCATTGTACAGAGAATCAGAGCTTATTGAGGAGGATGCACTTGGTATGTGTTGGATTTCCTTTTATGTTATGCATGTATTCCTTATTTATATTTGTAATATTTCTTTCCTTATTGGTTGATGGTCTTTCTTCTATATAAGAGTACCTTGTATTTGTTTTAGATGAGTAAGAAGAAATACAATAATATTATTCTTCTTCCTAAGTTTAAGATGGTATTAGAGCATATGCAACTCCTAGCTGCCTTTAAAACCCTCACCATTTTTTGGAACCATAGTCACCGCCTTTGGAACCCTGGTTGCCATTCTTGACTGGTGCATCCTACTTCTATCGTTGTTGGTTTAATTTTCCTTGACCCATATGTTTCTATCGTCACATTCCGACCATAACTAGGGACCTTCGTGTTCGTCTTCAATCATAACCCATTATTGACTTAGTCAAGACTTTGTATATGGTCTTTGCTAGAGGTGTTTGGGTCTCCGTCGCTCATCTTTGTTGTTCGCCATGGTCCTTGTCATAGTTGTTGCAATTTCGTTGGATCATCACTGAGGATTCCTCACAACCCTAGTTTGTCGTCGTCGTGTCTCTCTGCCACCATCACTGTCTGTGTCTTCTGCCACTGCTTTCAACTTCTGGTTTGTGATTGATTTGCATTCAACATTGGTTCAAGCGTTCGTGTTTGCGACCATTTGGTTATCTGCGGAGGTCTTTATTGTCTGGTTTGGTTTGGTTCAAACTTGGTTGGTTCAATTTGAGATCTAATTCAAATCGGTTCAAGTTCTGATTCCATTCACTATTTGATTGGTTAGGCCAGTTTGGTGAAAAAAAGAAATTTGGTTTCTTTTTTCCAACTAAGGTGATTTTTATGTCATTGTTGTGACTCAAGTTTCTACCTTAAAACGTTTATTTACCAATTCATTTAAAAAATACTAATTGCTCCATTTCATTCCAAACCTTATAGTTAATTCATAGTGATGTTTGGGGTCCTTGAGTTTTGACTCAGTGGTAAAAAGTTGTTTGTTACTTTTATATAGATCACACACATCTATCTTGGGTCTATTTAATTACAAATAGTGTGAGGTTAAAAAATATTTCTATAATCTGATTGAAATCCAATTTCAACTAACAATCAACATTTTACACACTGACAATAGAACTGAGTATTTCAACGGGTACTTGAATGATTTTTTATATCAATATACTTGTTGAGTTACCTATCAACAAAATGGGATTGATTATAAAAAAAAAAAAAATAGGCACTTACGAGAGGTTGCACATGCCATAGTTTTTTCTGTGCATGTTCCTAAGCATTTATGGGAGAAAGCTATACTCACCGCTACCTATCTGATAAATTCCTGTTTAAGTATTAAGTTTTAGTACATCTCTTGAATGCCATGAGACTGATTTTCCAAATGGTCGTACACATTCTGTTCACATACTAGTTTTTTTACGATCAAAACTTAATCACAGGGCTACTAAATGCATATTTTTGGGTTATGCTTCTAATCAAAAGGTGTATAGATGCTTTGATCCTTAGACAAAAAGGTTTTATATGAGCATGGACGTGTGTTTTTTAGAAAACCAACCATATTTGACCTAAAATTCTTTTTCGAGGGAGAATCAAATATAGAAGATAATTCGTGGGATCTATTTGAACCCTTCCTTATGTCATTCATCTCGACTTGTCTATCCTTAGTCCTTTGATATCAAGTATATAAACTTCTCATTTAGGAGGAATAATACTACAAAATGACTCTAGGTCAAATTCCTCAATTAAAGTTTTATACTAGAAGAGCAGTCGATCAAAGGAACGAAGGTCTATTAGTCCCTCTTACGTTCTTCCTAATCTTTCGGATGTTCAAAATGCCTTTCCTATTATTTTTTTTATCTTGATGTTCCTATTGCTATTAGGAAAAGTACTTGAACCTTATCTCATAAGCAAAATTGTCAAATAGTCATAATAGAATTGTTATATTAATTGTCTATGTTGATGATATTATCACAAGTAATGATGAAGATGGATAAGTTTTAAGAACAAATTTGCAAGTGAGTTCCAAATAAGAATCTTGGGGGACCTTGAAATACTTTTTAGAGATGGAGTTTGCTAAGAACTCCTATCGAACCGAATGTCATGCAAGAATTAAAGGCCAAAGACCAAAGACAAAGACAATTCATGCATTCACTTAAACCGATTCATTATGAAGCAGTGGATAGAATTTTGAGATATCTGGAAGGAACTTTAGGCAAAGGTATATTATTTTAGAACCATGATAATTTTCAAGTTGAAGTGTTTACTGATGTAGATGGGGCTGAAAGCATTATGGATAGAAGATCTACTTTTTATAGTTTGTTCTGTTGGAGGAAATTTAGTTACATGGCATAATAGAGAACGAAATGTAGTGGTCAGAAGTAGTGCCGAAGTAAAATTTAGAGCCTTAGCGTATGAAATTTGTGAACGATATGGATTATCACAATACTTAATGAATTGAAATTGTCTAAAAAAACACCTATTCGGGTCTATTGTGACGTCGCCACAACACATAATCCTGTCCTACAAGATAGGAAAAACCAAATGAAGTTGACAAGCATTTCATAAAAGGGAAGATTGATGATGTAATATGCATATCTTATCTTCCGACGACAGAACAAATGACTCAATATGTGAACTAAATCTGTCAAAACGACAACTTGATAACTTATCAACAAGCTGACTATGGAGGATATCCACAAACCAGCTTGAGGAGAAGTGTTGGATTTCCTTTTATGTCTTTTGTATAATTGCTTGTGTATTAGGTATATATCCCTTCTTTATATTTGTAATTTTTCTTTCCTTATTGGTTGATGGATGAGCTGTAGGAGTAAGGAATGCTGCACAGAGAAAACTTTTTGATGAACTTGGCATTGCTGCTGAAGACGTACCAGTCGATCAATTCACATCCATTGGTCGCATACTCTATAAGGCGCCATCTGATGGAAAATGGGGAGAGCATGAGCGTAAATATTCCAACTCTATTGCTATCGTTTTGAATTCATCTGTTCTTCTCTGAATTTATTGACATGTCGTCTGCTTGATTCTGGAAGTCTTTTAGTTTGATCCCTGCCTAAATCAGATGATCAGAGGACTAGTTATTGCACTATATTTAGACTCTTGAATTGAGTTCGTTGAGTCGAGTTTAGTGACGAATATGGCATTAAAAAAGGATCTACATTCAAACTCCTATAATAGTTCTTCACTTGTCGTCGGGTTTTCTGCGGGCGTATTCCTGATCCGTAGATGGTAGAGGCTGTTAAGAACATGTATAAACAGTTTAACCTTTTTGTGTATCCTGATAATTCGACCGTTGCCATATATCTTGTTGCTTGCAGTCGATTATCTCCTATTCGTGGTTCGGAATGTCCATGTGAATCCAAACCCGGACGAAGTGGCGGATATCAAATATGTGAACCAGGAACAGTTGAAAGAACTGGTGAGGAAAGCAGATGCTGGAGAGGGTGGACTGAAGCTCTCACCTTGGTTCAGGCTAGTTGTGAACAGCTTCTTGTATAAATGGTGGGATCATCTTCTGAAAGGAACTCTCAATGAAGTTGTTGACATGAAAACCATTCACAAGCTCACCTGAATCCATTCACTGTGTGTGGTTATTATGATTTAGGAACAAAGATGAGTTCAATAATTGGGATATCGACACAGGTAGACTATTTATGTAACATTTTTCCTTACCTAAATGCTTGAAATTTTAGAAATTCAGACTTTCATCCACAAGTGACCTGAATTTACGATCATATGCGACTTGATCTTAATCTTGAATGAGTAACTCCGAGTAAGAATGACTTTTGTAGTCGATTTATAAGTCTAC

mRNA sequence

CGTGAGACAGCGGGGCCGTTGTTCACACCACCTCCGATCTTCTTCAAAAGGCGATTTGCAGGTCATTTGATCCTCAAATGGTGGATTCCCCAATTCCCCAATGTTTCTAATAACCTCTCACCTCCTCAAAACCCCTCTCTCTTTCCCCCCTCCCATTTCCTTCTCTTCCAAATGTCGTTTCGCTTCTTCTGTTTCCGCCCCTCGCACCCTCTTCGCTAGGGTCTCCCGCTGCTCTCTCTCCACCAACACTACCATGGATTCCGCTGCTGATGCTTCCATGGATGCCGTCCAGAGGCGCCTTATGTTCGATGACGAATGCATTCTGGTGGATGAAAGTGATAATATTGTTGGTCACGATTCTAAATATAATTGTCACTTGATGGATAATATTGAGTCAAACAAAGCACTCCATAGAGCCTTCAGTGTCTTCTTATTTAACAATAAATTTGAGTTGCTTCTTCAGCAACGTTCTGCGACAAAAGTAACATTCCCCCTTGTTTGGACGAACACCTGCTGCAGCCATCCATTGTACAGAGAATCAGAGCTTATTGAGGAGGATGCACTTGGAGTAAGGAATGCTGCACAGAGAAAACTTTTTGATGAACTTGGCATTGCTGCTGAAGACGTACCAGTCGATCAATTCACATCCATTGGTCGCATACTCTATAAGGCGCCATCTGATGGAAAATGGGGAGAGCATGAGCTCGATTATCTCCTATTCGTGGTTCGGAATGTCCATGTGAATCCAAACCCGGACGAAGTGGCGGATATCAAATATGTGAACCAGGAACAGTTGAAAGAACTGGTGAGGAAAGCAGATGCTGGAGAGGGTGGACTGAAGCTCTCACCTTGGTTCAGGCTAGTTGTGAACAGCTTCTTGTATAAATGGTGGGATCATCTTCTGAAAGGAACTCTCAATGAAGTTGTTGACATGAAAACCATTCACAAGCTCACCTGAATCCATTCACTGTGTGTGGTTATTATGATTTAGGAACAAAGATGAGTTCAATAATTGGGATATCGACACAGGTAGACTATTTATGTAACATTTTTCCTTACCTAAATGCTTGAAATTTTAGAAATTCAGACTTTCATCCACAAGTGACCTGAATTTACGATCATATGCGACTTGATCTTAATCTTGAATGAGTAACTCCGAGTAAGAATGACTTTTGTAGTCGATTTATAAGTCTAC

Coding sequence (CDS)

ATGTTTCTAATAACCTCTCACCTCCTCAAAACCCCTCTCTCTTTCCCCCCTCCCATTTCCTTCTCTTCCAAATGTCGTTTCGCTTCTTCTGTTTCCGCCCCTCGCACCCTCTTCGCTAGGGTCTCCCGCTGCTCTCTCTCCACCAACACTACCATGGATTCCGCTGCTGATGCTTCCATGGATGCCGTCCAGAGGCGCCTTATGTTCGATGACGAATGCATTCTGGTGGATGAAAGTGATAATATTGTTGGTCACGATTCTAAATATAATTGTCACTTGATGGATAATATTGAGTCAAACAAAGCACTCCATAGAGCCTTCAGTGTCTTCTTATTTAACAATAAATTTGAGTTGCTTCTTCAGCAACGTTCTGCGACAAAAGTAACATTCCCCCTTGTTTGGACGAACACCTGCTGCAGCCATCCATTGTACAGAGAATCAGAGCTTATTGAGGAGGATGCACTTGGAGTAAGGAATGCTGCACAGAGAAAACTTTTTGATGAACTTGGCATTGCTGCTGAAGACGTACCAGTCGATCAATTCACATCCATTGGTCGCATACTCTATAAGGCGCCATCTGATGGAAAATGGGGAGAGCATGAGCTCGATTATCTCCTATTCGTGGTTCGGAATGTCCATGTGAATCCAAACCCGGACGAAGTGGCGGATATCAAATATGTGAACCAGGAACAGTTGAAAGAACTGGTGAGGAAAGCAGATGCTGGAGAGGGTGGACTGAAGCTCTCACCTTGGTTCAGGCTAGTTGTGAACAGCTTCTTGTATAAATGGTGGGATCATCTTCTGAAAGGAACTCTCAATGAAGTTGTTGACATGAAAACCATTCACAAGCTCACCTGA

Protein sequence

MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASMDAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQFTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKADAGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT

Homology

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BLAST of CmoCh05G008010 vs. ExPASy Swiss-Prot
Match: Q39471 (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia breweri OX=36903 GN=IPI2 PE=3 SV=2)

HSP 1 Score: 416.4 bits (1069), Expect = 2.6e-115
Identity = 207/291 (71.13%), Postives = 239/291 (82.13%), Query Frame = 0


Query: 4   ITSHLLKTPLS----------FPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMD 63
           +TS L K  LS           PPP+        +S ++AP +L   +S  S++T+  M 
Sbjct: 3   LTSRLYKLRLSSLHSFGSLPILPPPLR-------SSRIAAPLSLRVSLSTRSIATSIAMG 62

Query: 64  SAADASMDAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFN 123
            AADA MDAVQRRLMFDDECILVDE D +VGH+SKYNCH+ + IES   LHRAFSVFLFN
Sbjct: 63  EAADAGMDAVQRRLMFDDECILVDEVDRVVGHESKYNCHMWEKIESGNMLHRAFSVFLFN 122

Query: 124 NKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAA 183
           +KFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELI+E+ LGVRNAAQRKL DELGI A
Sbjct: 123 SKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPA 182

Query: 184 EDVPVDQFTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLK 243
           EDVPVD+FT + R+LYKAPSDGKWGEHELDYLLF+VR+V V+PNPDEVA+IKYVN+EQLK
Sbjct: 183 EDVPVDEFTPLSRMLYKAPSDGKWGEHELDYLLFIVRDVAVHPNPDEVAEIKYVNREQLK 242

Query: 244 ELVRKADAGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKL 285
           EL++KADAGE GLKLSPWFRLVV++FL KWWDH+ KGTL+E VDMK+IHKL
Sbjct: 243 ELLKKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKSIHKL 286

[Close]

BLAST of CmoCh05G008010 vs. ExPASy Swiss-Prot
Match: O48964 (Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata OX=16922 GN=IPI1 PE=2 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 8.4e-114
Identity = 190/232 (81.90%), Postives = 216/232 (93.10%), Query Frame = 0


Query: 53  DSAADASMDAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLF 112
           D+A DA MDAVQ+RLMF+D+CILVDE+DN+VGHD+KYNCHLM+ IES   LHRAFSVFLF
Sbjct: 3   DAATDAGMDAVQKRLMFEDKCILVDENDNVVGHDTKYNCHLMEKIESENLLHRAFSVFLF 62

Query: 113 NNKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIA 172
           N+K+ELLLQQRSATKVTFPLVWTNTCCSHPLYRESELI+E+ALG RNAAQRKL DELGI 
Sbjct: 63  NSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIKENALGARNAAQRKLLDELGIP 122

Query: 173 AEDVPVDQFTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQL 232
           AEDVPVDQF  +GRILYKAPSDGKWGEHELDYLLF+VR+V+VNPNPDEVADIKYV ++QL
Sbjct: 123 AEDVPVDQFIPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADIKYVTRDQL 182

Query: 233 KELVRKADAGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKL 285
           KEL+RKADAGE GLKLSPWFRLVV++FL+KWWDH+ KGT++E  DMK+IHKL
Sbjct: 183 KELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTMHEAADMKSIHKL 234

[Close]

BLAST of CmoCh05G008010 vs. ExPASy Swiss-Prot
Match: Q39664 (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana OX=3938 GN=IPI2 PE=3 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.1e-113
Identity = 209/288 (72.57%), Postives = 240/288 (83.33%), Query Frame = 0


Query: 4   ITSHLLKTPL-SFPPPISFS-----SKCRFASSVSAPRTLFARVSRCSLSTNTTM-DSAA 63
           +TS L K  L S P   SF      S    +S + AP ++ A +S  S++T+  M ++AA
Sbjct: 3   LTSRLYKPRLFSLPSQHSFRALPILSPPLRSSCIPAPLSVRASLSTRSIATSIAMGEAAA 62

Query: 64  DASMDAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKF 123
           DA MDAVQRRLMFDDECILVDE D +VGH+SKYNCHL + IES   LHRAF+VFLFN+KF
Sbjct: 63  DAGMDAVQRRLMFDDECILVDEVDCVVGHESKYNCHLWEKIESGNMLHRAFTVFLFNSKF 122

Query: 124 ELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDV 183
           ELLLQQRSATKVTFPLVWTNTCCSHPLYRESELI+E+ LGVRNAAQRKL DELGI AEDV
Sbjct: 123 ELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDV 182

Query: 184 PVDQFTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELV 243
           PVD+FT + R+LYKAPSDGKWGEHELDYLLF+VR+V ++PNPDEVADIKYVN+EQLKEL+
Sbjct: 183 PVDEFTPVSRMLYKAPSDGKWGEHELDYLLFIVRDVGIHPNPDEVADIKYVNREQLKELL 242

Query: 244 RKADAGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKL 285
           RKADAGE GLKLSPWFRLVV++FL KWWDH+ KGTL+E VDMKTIH L
Sbjct: 243 RKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKTIHNL 290

[Close]

BLAST of CmoCh05G008010 vs. ExPASy Swiss-Prot
Match: O48965 (Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata OX=16922 GN=IPI2 PE=2 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 4.2e-113
Identity = 200/296 (67.57%), Postives = 236/296 (79.73%), Query Frame = 0


Query: 3   LITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSL-------------STN 62
           L +S L    L   P +SF        +    R++F   S  S+             +T+
Sbjct: 14  LSSSFLASPKLKLHPRLSFFFHSSSFRNHIITRSVFCSSSHLSVRVSSYHSSVAAKATTS 73

Query: 63  TTMDSAADASMDAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSV 122
              D+A DA MDAVQRRLMF+DECILVDE+D++VGHD+KYNCHLM+ IES+  LHRAFSV
Sbjct: 74  AMGDTATDAGMDAVQRRLMFEDECILVDENDHVVGHDTKYNCHLMEKIESDNLLHRAFSV 133

Query: 123 FLFNNKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDEL 182
           FLFN+K+ELLLQQRSATKVTFPLVWTNTCCSHP YRESEL++E+ALGVRNAAQRKL DEL
Sbjct: 134 FLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPRYRESELVDENALGVRNAAQRKLLDEL 193

Query: 183 GIAAEDVPVDQFTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQ 242
           GI AEDVPVDQF  +GR+LYKAPSDGKWGEHELDYLLF++R+V+V+PNPDEVAD+KYVNQ
Sbjct: 194 GIPAEDVPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFIIRDVNVHPNPDEVADVKYVNQ 253

Query: 243 EQLKELVRKADAGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT 286
           +QLK+L+RK DAGE GLKLSPWFRLVV +FL+KWWDH+ KGTL +  DMKTIHKLT
Sbjct: 254 DQLKDLLRKVDAGEEGLKLSPWFRLVVENFLFKWWDHVEKGTLQDATDMKTIHKLT 309

[Close]

BLAST of CmoCh05G008010 vs. ExPASy Swiss-Prot
Match: Q42553 (Isopentenyl-diphosphate Delta-isomerase II, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IPP2 PE=1 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.2e-112
Identity = 190/237 (80.17%), Postives = 215/237 (90.72%), Query Frame = 0


Query: 48  TNTTMDSAADASMDAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAF 107
           + T M    DA MDAVQRRLMF+DECILVDE+D +VGHDSKYNCHLM+NIE+   LHRAF
Sbjct: 48  SGTAMTDTKDAGMDAVQRRLMFEDECILVDETDRVVGHDSKYNCHLMENIEAKNLLHRAF 107

Query: 108 SVFLFNNKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFD 167
           SVFLFN+K+ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+++ALGVRNAAQRKL D
Sbjct: 108 SVFLFNSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAAQRKLLD 167

Query: 168 ELGIAAEDVPVDQFTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYV 227
           ELGI AEDVPVD+FT +GR+LYKAPSDGKWGEHELDYLLF+VR+V V PNPDEVA+IKYV
Sbjct: 168 ELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPNPDEVAEIKYV 227

Query: 228 NQEQLKELVRKADAGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKL 285
           ++E+LKELV+KADAGE GLKLSPWFRLVV++FL KWWDH+ KGTL E +DMKTIHKL
Sbjct: 228 SREELKELVKKADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGTLVEAIDMKTIHKL 284

[Close]

BLAST of CmoCh05G008010 vs. ExPASy TrEMBL
Match: A0A6J1ENL1 (Isopentenyl-diphosphate Delta-isomerase OS=Cucurbita moschata OX=3662 GN=LOC111436246 PE=3 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.5e-161
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM 60
           MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM
Sbjct: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM 60

Query: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120
           DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL
Sbjct: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120

Query: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180
           QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ
Sbjct: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180

Query: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240
           FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD
Sbjct: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240

Query: 241 AGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT 286
           AGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT
Sbjct: 241 AGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT 285

[Close]

BLAST of CmoCh05G008010 vs. ExPASy TrEMBL
Match: A0A6J1K659 (Isopentenyl-diphosphate Delta-isomerase OS=Cucurbita maxima OX=3661 GN=LOC111492033 PE=3 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 5.8e-158
Identity = 280/285 (98.25%), Postives = 280/285 (98.25%), Query Frame = 0


Query: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM 60
           MFLITSHLLKTPLSFPPPISFSSKCRFASSVS  R LFARVSRC LSTNTTMDSAADASM
Sbjct: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSPSRPLFARVSRCYLSTNTTMDSAADASM 60

Query: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120
           DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL
Sbjct: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120

Query: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180
           QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ
Sbjct: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180

Query: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240
           FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD
Sbjct: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240

Query: 241 AGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT 286
           AGEGGLKLSPWFRLVVNSFLYKWWDHL KGTLNEVVDMKTIHKLT
Sbjct: 241 AGEGGLKLSPWFRLVVNSFLYKWWDHLQKGTLNEVVDMKTIHKLT 285

[Close]

BLAST of CmoCh05G008010 vs. ExPASy TrEMBL
Match: A0A0A0LHK1 (Isopentenyl-diphosphate Delta-isomerase OS=Cucumis sativus OX=3659 GN=Csa_2G074290 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.3e-137
Identity = 242/284 (85.21%), Postives = 265/284 (93.31%), Query Frame = 0


Query: 4   ITSHLLKT--PLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASMD 63
           ++ +LLK    LS  P ISF+SKC F+SSV +PR +F+RVSRCSLST T M SA DA+MD
Sbjct: 3   LSLNLLKATLSLSLSPSISFTSKCSFSSSVFSPRPIFSRVSRCSLSTKTAMGSAPDAAMD 62

Query: 64  AVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLLQ 123
           AVQRRLMFDDECILVDE+DNIVGHDSKYNCHLMDNIE NKALHRAFSVFLFNNKFELLLQ
Sbjct: 63  AVQRRLMFDDECILVDETDNIVGHDSKYNCHLMDNIELNKALHRAFSVFLFNNKFELLLQ 122

Query: 124 QRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQF 183
           QRSATKVTFPLVWTNTCCSHPLYRESELIE++ALGVRNAAQRKLFDELGI AEDVPVDQF
Sbjct: 123 QRSATKVTFPLVWTNTCCSHPLYRESELIEDNALGVRNAAQRKLFDELGIVAEDVPVDQF 182

Query: 184 TSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKADA 243
           TSIGRILYKAPSDG+WGEHELDYLLF+VRNV+VNPNPDEVADI+YVNQEQLKELVRKADA
Sbjct: 183 TSIGRILYKAPSDGRWGEHELDYLLFIVRNVNVNPNPDEVADIRYVNQEQLKELVRKADA 242

Query: 244 GEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT 286
           GE GLKLSPWF+LVVN+FL+KWWDHL KG+++E+VDMKTIHKLT
Sbjct: 243 GEDGLKLSPWFKLVVNNFLFKWWDHLEKGSISEIVDMKTIHKLT 286

[Close]

BLAST of CmoCh05G008010 vs. ExPASy TrEMBL
Match: A0A1S3B4E2 (Isopentenyl-diphosphate Delta-isomerase OS=Cucumis melo OX=3656 GN=LOC103485883 PE=3 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 4.3e-137
Identity = 243/284 (85.56%), Postives = 264/284 (92.96%), Query Frame = 0


Query: 4   ITSHLLKT--PLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASMD 63
           ++ +LLK    LS  P ISFSSKC F+SSV +PR +F+RVSR SLST T M SA DA+MD
Sbjct: 3   LSFNLLKATLSLSLSPSISFSSKCSFSSSVFSPRPIFSRVSRSSLSTKTAMGSAPDAAMD 62

Query: 64  AVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLLQ 123
           AVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIE NKALHRAFSVFLFNNKFELLLQ
Sbjct: 63  AVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIELNKALHRAFSVFLFNNKFELLLQ 122

Query: 124 QRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQF 183
           QRSATKVTFPLVWTNTCCSHPLYRESELIE++ALGVRNAAQRKLFDELGI AEDVPVDQF
Sbjct: 123 QRSATKVTFPLVWTNTCCSHPLYRESELIEDNALGVRNAAQRKLFDELGIVAEDVPVDQF 182

Query: 184 TSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKADA 243
           TSIGRILYKAPSDG+WGEHELDYLLF+VRNV+VNPNP+EVAD++YVNQEQLKELVRKADA
Sbjct: 183 TSIGRILYKAPSDGRWGEHELDYLLFIVRNVNVNPNPNEVADVRYVNQEQLKELVRKADA 242

Query: 244 GEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT 286
           GE GLKLSPWF+LVVN+FL+KWWDHL KGT+NE+VDMKTIHKLT
Sbjct: 243 GEDGLKLSPWFKLVVNNFLFKWWDHLEKGTINEIVDMKTIHKLT 286

[Close]

BLAST of CmoCh05G008010 vs. ExPASy TrEMBL
Match: A0A6J1D9X9 (Isopentenyl-diphosphate Delta-isomerase OS=Momordica charantia OX=3673 GN=LOC111018227 PE=3 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.2e-134
Identity = 243/284 (85.56%), Postives = 261/284 (91.90%), Query Frame = 0


Query: 4   ITSHLLKT--PLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASMD 63
           ++SHLLKT   LS    I+FSSKCRF SSV APR L AR+SRC LST T + SA D++MD
Sbjct: 5   LSSHLLKTTLSLSLSSSINFSSKCRF-SSVFAPRPLIARLSRCCLSTKTAVGSAPDSAMD 64

Query: 64  AVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLLQ 123
           AVQRRLMFDDECILVDE+DNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFN++FELLLQ
Sbjct: 65  AVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNSRFELLLQ 124

Query: 124 QRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQF 183
           QRS TKVTFPLVWTNTCCSHPLYRESELIEED+LGVRNAAQRKLFDELGIAAED PVDQF
Sbjct: 125 QRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDXPVDQF 184

Query: 184 TSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKADA 243
            SIGRILYKAPSDG+WGEHELDYLLFVVRN++VN NPDEVADIKYVNQEQLKEL+RKADA
Sbjct: 185 ISIGRILYKAPSDGRWGEHELDYLLFVVRNINVNLNPDEVADIKYVNQEQLKELLRKADA 244

Query: 244 GEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT 286
           GE G+KLSPWFRLVVN+FL+KWWDHL KGTL EVVDMKTIHKLT
Sbjct: 245 GEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT 287

[Close]

BLAST of CmoCh05G008010 vs. NCBI nr
Match: XP_022929757.1 (isopentenyl-diphosphate Delta-isomerase I-like [Cucurbita moschata])

HSP 1 Score: 578.6 bits (1490), Expect = 3.0e-161
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM 60
           MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM
Sbjct: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM 60

Query: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120
           DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL
Sbjct: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120

Query: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180
           QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ
Sbjct: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180

Query: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240
           FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD
Sbjct: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240

Query: 241 AGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT 286
           AGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT
Sbjct: 241 AGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT 285

[Close]

BLAST of CmoCh05G008010 vs. NCBI nr
Match: KAG7029893.1 (Isopentenyl-diphosphate Delta-isomerase II [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 575.9 bits (1483), Expect = 2.0e-160
Identity = 283/285 (99.30%), Postives = 284/285 (99.65%), Query Frame = 0


Query: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM 60
           MFLITSHLLKTPLSFPPP+SFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM
Sbjct: 1   MFLITSHLLKTPLSFPPPVSFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM 60

Query: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120
           DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL
Sbjct: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120

Query: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180
           QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ
Sbjct: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180

Query: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240
           FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD
Sbjct: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240

Query: 241 AGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT 286
           AGEGGLKLSPWFRLVVNSFLYKWWDHL KGTLNEVVDMKTIHKLT
Sbjct: 241 AGEGGLKLSPWFRLVVNSFLYKWWDHLQKGTLNEVVDMKTIHKLT 285

[Close]

BLAST of CmoCh05G008010 vs. NCBI nr
Match: XP_023546741.1 (isopentenyl-diphosphate Delta-isomerase I-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 571.6 bits (1472), Expect = 3.7e-159
Identity = 281/285 (98.60%), Postives = 283/285 (99.30%), Query Frame = 0


Query: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM 60
           MFLITSHLLKTPLSFPPPISFSSKCRFASSVS+PR LFARVSRCSLSTNTTMDSAADASM
Sbjct: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSSPRPLFARVSRCSLSTNTTMDSAADASM 60

Query: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120
           DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL
Sbjct: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120

Query: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180
           QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ
Sbjct: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180

Query: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240
           FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD
Sbjct: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240

Query: 241 AGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT 286
           +GEGGLKLSPWFRLVVNSFLYKWWDHL KGTLNEVVDMKTIHKLT
Sbjct: 241 SGEGGLKLSPWFRLVVNSFLYKWWDHLQKGTLNEVVDMKTIHKLT 285

[Close]

BLAST of CmoCh05G008010 vs. NCBI nr
Match: XP_022996956.1 (isopentenyl-diphosphate Delta-isomerase I-like [Cucurbita maxima])

HSP 1 Score: 566.6 bits (1459), Expect = 1.2e-157
Identity = 280/285 (98.25%), Postives = 280/285 (98.25%), Query Frame = 0


Query: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM 60
           MFLITSHLLKTPLSFPPPISFSSKCRFASSVS  R LFARVSRC LSTNTTMDSAADASM
Sbjct: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSPSRPLFARVSRCYLSTNTTMDSAADASM 60

Query: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120
           DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL
Sbjct: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120

Query: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180
           QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ
Sbjct: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180

Query: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240
           FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD
Sbjct: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240

Query: 241 AGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKLT 286
           AGEGGLKLSPWFRLVVNSFLYKWWDHL KGTLNEVVDMKTIHKLT
Sbjct: 241 AGEGGLKLSPWFRLVVNSFLYKWWDHLQKGTLNEVVDMKTIHKLT 285

[Close]

BLAST of CmoCh05G008010 vs. NCBI nr
Match: KAG6598939.1 (Isopentenyl-diphosphate Delta-isomerase II, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 531.6 bits (1368), Expect = 4.3e-147
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM 60
           MFLITSHLLKTPLSFPPP+SFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM
Sbjct: 1   MFLITSHLLKTPLSFPPPVSFSSKCRFASSVSAPRTLFARVSRCSLSTNTTMDSAADASM 60

Query: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120
           DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL
Sbjct: 61  DAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKFELLL 120

Query: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180
           QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ
Sbjct: 121 QQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDVPVDQ 180

Query: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240
           FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD
Sbjct: 181 FTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELVRKAD 240

Query: 241 AGEGGLKLSPWFRLVVNSFLYKW 264
           AGEGGLKLSPWFRLVVNSFLYKW
Sbjct: 241 AGEGGLKLSPWFRLVVNSFLYKW 263

[Close]

BLAST of CmoCh05G008010 vs. TAIR 10
Match: AT3G02780.1 (isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 )

HSP 1 Score: 407.5 bits (1046), Expect = 8.7e-114
Identity = 190/237 (80.17%), Postives = 215/237 (90.72%), Query Frame = 0


Query: 48  TNTTMDSAADASMDAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAF 107
           + T M    DA MDAVQRRLMF+DECILVDE+D +VGHDSKYNCHLM+NIE+   LHRAF
Sbjct: 48  SGTAMTDTKDAGMDAVQRRLMFEDECILVDETDRVVGHDSKYNCHLMENIEAKNLLHRAF 107

Query: 108 SVFLFNNKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFD 167
           SVFLFN+K+ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+++ALGVRNAAQRKL D
Sbjct: 108 SVFLFNSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAAQRKLLD 167

Query: 168 ELGIAAEDVPVDQFTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYV 227
           ELGI AEDVPVD+FT +GR+LYKAPSDGKWGEHELDYLLF+VR+V V PNPDEVA+IKYV
Sbjct: 168 ELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPNPDEVAEIKYV 227

Query: 228 NQEQLKELVRKADAGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKL 285
           ++E+LKELV+KADAGE GLKLSPWFRLVV++FL KWWDH+ KGTL E +DMKTIHKL
Sbjct: 228 SREELKELVKKADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGTLVEAIDMKTIHKL 284

[Close]

BLAST of CmoCh05G008010 vs. TAIR 10
Match: AT5G16440.1 (isopentenyl diphosphate isomerase 1 )

HSP 1 Score: 399.1 bits (1024), Expect = 3.1e-111
Identity = 198/288 (68.75%), Postives = 232/288 (80.56%), Query Frame = 0


Query: 1   MFLITSHLLKTPLSFPPPISFSSKCRFASSVSAPRTLFARVSRCSLSTN----TTMDSAA 60
           +F   S  L++ L      S SS  RFA    +P  + +   R  LS       TM  + 
Sbjct: 6   LFSFPSFHLRSLLPSLSSSSSSSSSRFAPPRLSP--IRSPAPRTQLSVRAFSAVTMTDSN 65

Query: 61  DASMDAVQRRLMFDDECILVDESDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNNKF 120
           DA MDAVQRRLMF+DECILVDE+D +VGHD+KYNCHLM+ IE+   LHRAFSVFLFN+K+
Sbjct: 66  DAGMDAVQRRLMFEDECILVDENDRVVGHDTKYNCHLMEKIEAENLLHRAFSVFLFNSKY 125

Query: 121 ELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEDALGVRNAAQRKLFDELGIAAEDV 180
           ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIEE+ LGVRNAAQRKLFDELGI AEDV
Sbjct: 126 ELLLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEENVLGVRNAAQRKLFDELGIVAEDV 185

Query: 181 PVDQFTSIGRILYKAPSDGKWGEHELDYLLFVVRNVHVNPNPDEVADIKYVNQEQLKELV 240
           PVD+FT +GR+LYKAPSDGKWGEHE+DYLLF+VR+V + PNPDEVA+IKYV++E+LKELV
Sbjct: 186 PVDEFTPLGRMLYKAPSDGKWGEHEVDYLLFIVRDVKLQPNPDEVAEIKYVSREELKELV 245

Query: 241 RKADAGEGGLKLSPWFRLVVNSFLYKWWDHLLKGTLNEVVDMKTIHKL 285
           +KADAG+  +KLSPWFRLVV++FL KWWDH+ KGT+ E  DMKTIHKL
Sbjct: 246 KKADAGDEAVKLSPWFRLVVDNFLMKWWDHVEKGTITEAADMKTIHKL 291

The following BLAST results are available for this feature:

BLAST of CmoCh05G008010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39471	2.6e-115	71.13	Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia breweri OX=36903 GN=IPI2 P...	[more]
O48964	8.4e-114	81.90	Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata OX=16922 GN=I...	[more]
Q39664	1.1e-113	72.57	Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana OX=3938 GN=IPI2 P...	[more]
O48965	4.2e-113	67.57	Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata OX=16922 GN=...	[more]
Q42553	1.2e-112	80.17	Isopentenyl-diphosphate Delta-isomerase II, chloroplastic OS=Arabidopsis thalian...	[more]

BLAST of CmoCh05G008010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENL1	1.5e-161	100.00	Isopentenyl-diphosphate Delta-isomerase OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1K659	5.8e-158	98.25	Isopentenyl-diphosphate Delta-isomerase OS=Cucurbita maxima OX=3661 GN=LOC111492...	[more]
A0A0A0LHK1	3.3e-137	85.21	Isopentenyl-diphosphate Delta-isomerase OS=Cucumis sativus OX=3659 GN=Csa_2G0742...	[more]
A0A1S3B4E2	4.3e-137	85.56	Isopentenyl-diphosphate Delta-isomerase OS=Cucumis melo OX=3656 GN=LOC103485883 ...	[more]
A0A6J1D9X9	1.2e-134	85.56	Isopentenyl-diphosphate Delta-isomerase OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of CmoCh05G008010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929757.1	3.0e-161	100.00	isopentenyl-diphosphate Delta-isomerase I-like [Cucurbita moschata]	[more]
KAG7029893.1	2.0e-160	99.30	Isopentenyl-diphosphate Delta-isomerase II [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023546741.1	3.7e-159	98.60	isopentenyl-diphosphate Delta-isomerase I-like [Cucurbita pepo subsp. pepo]	[more]
XP_022996956.1	1.2e-157	98.25	isopentenyl-diphosphate Delta-isomerase I-like [Cucurbita maxima]	[more]
KAG6598939.1	4.3e-147	99.62	Isopentenyl-diphosphate Delta-isomerase II, partial [Cucurbita argyrosperma subs...	[more]

BLAST of CmoCh05G008010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02780.1	8.7e-114	80.17	isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2	[more]
AT5G16440.1	3.1e-111	68.75	isopentenyl diphosphate isomerase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 103..241 e-value: 8.4E-21 score: 74.4
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 102..254 score: 17.676727
IPR011876	Isopentenyl-diphosphate delta-isomerase, type 1	TIGRFAM	TIGR02150	TIGR02150	coord: 73..255 e-value: 2.7E-58 score: 194.3
IPR011876	Isopentenyl-diphosphate delta-isomerase, type 1	CDD	cd02885	IPP_Isomerase	coord: 70..256 e-value: 1.08765E-82 score: 244.011
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 41..284 e-value: 1.4E-94 score: 318.1
None	No IPR available	PIRSR	PIRSR017340-1	PIRSR017340-1	coord: 62..234 e-value: 2.2E-9 score: 35.4
None	No IPR available	PANTHER	PTHR10885:SF14	ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE I-LIKE	coord: 38..284
None	No IPR available	PANTHER	PTHR10885	ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE	coord: 38..284
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 72..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G008010.1	CmoCh05G008010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0050992	dimethylallyl diphosphate biosynthetic process
biological_process	GO:0009240	isopentenyl diphosphate biosynthetic process
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0008299	isoprenoid biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0047443	4-hydroxy-4-methyl-2-oxoglutarate aldolase activity
molecular_function	GO:0004452	isopentenyl-diphosphate delta-isomerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008948	oxaloacetate decarboxylase activity
molecular_function	GO:0008428	ribonuclease inhibitor activity