CmoCh05G007630 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G007630
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ribosomal RNA processing protein 1 homolog
Location	Cmo_Chr05: 4305269 .. 4307041 (-)
RNA-Seq Expression	CmoCh05G007630
Synteny	CmoCh05G007630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGGTGGTTGAAGGAGATCAATATTTTGTTTCTTTGGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAGACCCTCCGTGTAATCATCAAGACATGGCTTCCGACTCAAACGAGCCTCTCCGATGGCGATATGAAGAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCGGACAAGGCTCCTGTTCAATCTGAGCTTATTAATCGTCTCGCTTCCCTGCTTCTCCATCTCGACCTCCCGCTAGCTGTTCAATACTTCTCTGTTTTTCTTCTCACCATGCGTCGTGAATGGGCCGGCATTGATGCGCTCAGGTTAGATAAGTTTTACCTTTTGATTCGTAGATTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTATGTCGTCGTTCGGTTCAAGTTTTGGAAGAAAGGGTTTTTTTCACTGATGATAAGTTTTATGGGAGTGGTGTTAATTACCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTGTTGATATTCTGTTCAAGCCATTCATTTATTCCATGGCTAAGCTGTCAGATAAAGTGTTGTTGGGAAAAATTAAGTCTAATCTTTTTGATGTGATTCTTAAAATGGGGAAGCAATTACTTGAGCGTCGAAAATGTGGAGAGGATGTTGATTCTGATGATGATATGGTTGTGTTGGGTTCAATTTCATTGACAAATTTATTCTCAACTACATTTTATGATTTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTACTGTTTGCCATGCATGAAGAGTATCAGAAGTTGGAGAAAGATATTATCTCATCGGGGATTGAGATTTCGTTTCCAGATCTTCAAGAACAAGACGTGGATGAAGTGCCTACTTTAGTTCCTGTTTCCAGTGAAGAAGAGGTACCTTCAGAAATTTCCGCTGTTGATGTTGATATCACTGCGGAATCCACTGATAAGGCACATAAAAAGAAAAAGAAGCATAAAAAGGCCACTCCTTCAGAAATTTCCATGCTTGATGTTGATCTTACTGCTGAATCCACTGACAAGCCACTTAAAAAGCAAAAGAAGAATAAAAAGGCCACTGATGGCAGTGGCAAGAAGAAAACAAAGAAGACCACAAACGGTAGTTCTGATCTTGTTTCTGAAAATACTACTGTGAATAAGGACAATGAGAATATAGTTGCTTCTAACGGTGAGAATTCTAATAATGAACAGATTGGTGATGGAAATATGATAGCCTTGGATGAATCTGTGATATCAAACCTTCAGATTCAATTTGAGAAGGTTGCTTCTGAAGCTGATTTTGGAGACAATGTTGTGAGCCCTGTAATATCAACCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGATGGGCTGCAGAAACATGATGTAGTACTTCCTAGCGAAGTAGACGCTGAAGGAAATACGGCTGTGAAAAGTGGAGAGAAGAGTGTTAAGAAGGTAAGGTTTTCCATGAAAAATAACTTGGTATGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCTGCCACAGCTAAAAGGACAAAAAGGAGAGCTGTTGCAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTGTGAAGAAATTGAAATCTAAGAGTACTTAG

mRNA sequence

ATGGAGGAGGTGGTTGAAGGAGATCAATATTTTGTTTCTTTGGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAGACCCTCCGTGTAATCATCAAGACATGGCTTCCGACTCAAACGAGCCTCTCCGATGGCGATATGAAGAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCGGACAAGGCTCCTGTTCAATCTGAGCTTATTAATCGTCTCGCTTCCCTGCTTCTCCATCTCGACCTCCCGCTAGCTGTTCAATACTTCTCTGTTTTTCTTCTCACCATGCGTCGTGAATGGGCCGGCATTGATGCGCTCAGGTTAGATAAGTTTTACCTTTTGATTCGTAGATTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTATGTCGTCGTTCGGTTCAAGTTTTGGAAGAAAGGGTTTTTTTCACTGATGATAAGTTTTATGGGAGTGGTGTTAATTACCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTGTTGATATTCTGTTCAAGCCATTCATTTATTCCATGGCTAAGCTGTCAGATAAAGTGTTGTTGGGAAAAATTAAGTCTAATCTTTTTGATGTGATTCTTAAAATGGGGAAGCAATTACTTGAGCGTCGAAAATGTGGAGAGGATGTTGATTCTGATGATGATATGGTTGTGTTGGGTTCAATTTCATTGACAAATTTATTCTCAACTACATTTTATGATTTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTACTGTTTGCCATGCATGAAGAGTATCAGAAGTTGGAGAAAGATATTATCTCATCGGGGATTGAGATTTCGTTTCCAGATCTTCAAGAACAAGACGTGGATGAAGTGCCTACTTTAGTTCCTGTTTCCAGTGAAGAAGAGGTACCTTCAGAAATTTCCGCTGTTGATGTTGATATCACTGCGGAATCCACTGATAAGGCACATAAAAAGAAAAAGAAGCATAAAAAGGCCACTCCTTCAGAAATTTCCATGCTTGATGTTGATCTTACTGCTGAATCCACTGACAAGCCACTTAAAAAGCAAAAGAAGAATAAAAAGGCCACTGATGGCAGTGGCAAGAAGAAAACAAAGAAGACCACAAACGGTAGTTCTGATCTTGTTTCTGAAAATACTACTGTGAATAAGGACAATGAGAATATAGTTGCTTCTAACGGTGAGAATTCTAATAATGAACAGATTGGTGATGGAAATATGATAGCCTTGGATGAATCTGTGATATCAAACCTTCAGATTCAATTTGAGAAGGTTGCTTCTGAAGCTGATTTTGGAGACAATGTTGTGAGCCCTGTAATATCAACCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGATGGGCTGCAGAAACATGATGTAGTACTTCCTAGCGAAGTAGACGCTGAAGGAAATACGGCTGTGAAAAGTGGAGAGAAGAGTGTTAAGAAGGTAAGGTTTTCCATGAAAAATAACTTGGTATGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCTGCCACAGCTAAAAGGACAAAAAGGAGAGCTGTTGCAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTGTGAAGAAATTGAAATCTAAGAGTACTTAG

Coding sequence (CDS)

ATGGAGGAGGTGGTTGAAGGAGATCAATATTTTGTTTCTTTGGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAGACCCTCCGTGTAATCATCAAGACATGGCTTCCGACTCAAACGAGCCTCTCCGATGGCGATATGAAGAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCGGACAAGGCTCCTGTTCAATCTGAGCTTATTAATCGTCTCGCTTCCCTGCTTCTCCATCTCGACCTCCCGCTAGCTGTTCAATACTTCTCTGTTTTTCTTCTCACCATGCGTCGTGAATGGGCCGGCATTGATGCGCTCAGGTTAGATAAGTTTTACCTTTTGATTCGTAGATTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTATGTCGTCGTTCGGTTCAAGTTTTGGAAGAAAGGGTTTTTTTCACTGATGATAAGTTTTATGGGAGTGGTGTTAATTACCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTGTTGATATTCTGTTCAAGCCATTCATTTATTCCATGGCTAAGCTGTCAGATAAAGTGTTGTTGGGAAAAATTAAGTCTAATCTTTTTGATGTGATTCTTAAAATGGGGAAGCAATTACTTGAGCGTCGAAAATGTGGAGAGGATGTTGATTCTGATGATGATATGGTTGTGTTGGGTTCAATTTCATTGACAAATTTATTCTCAACTACATTTTATGATTTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTACTGTTTGCCATGCATGAAGAGTATCAGAAGTTGGAGAAAGATATTATCTCATCGGGGATTGAGATTTCGTTTCCAGATCTTCAAGAACAAGACGTGGATGAAGTGCCTACTTTAGTTCCTGTTTCCAGTGAAGAAGAGGTACCTTCAGAAATTTCCGCTGTTGATGTTGATATCACTGCGGAATCCACTGATAAGGCACATAAAAAGAAAAAGAAGCATAAAAAGGCCACTCCTTCAGAAATTTCCATGCTTGATGTTGATCTTACTGCTGAATCCACTGACAAGCCACTTAAAAAGCAAAAGAAGAATAAAAAGGCCACTGATGGCAGTGGCAAGAAGAAAACAAAGAAGACCACAAACGGTAGTTCTGATCTTGTTTCTGAAAATACTACTGTGAATAAGGACAATGAGAATATAGTTGCTTCTAACGGTGAGAATTCTAATAATGAACAGATTGGTGATGGAAATATGATAGCCTTGGATGAATCTGTGATATCAAACCTTCAGATTCAATTTGAGAAGGTTGCTTCTGAAGCTGATTTTGGAGACAATGTTGTGAGCCCTGTAATATCAACCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGATGGGCTGCAGAAACATGATGTAGTACTTCCTAGCGAAGTAGACGCTGAAGGAAATACGGCTGTGAAAAGTGGAGAGAAGAGTGTTAAGAAGGTAAGGTTTTCCATGAAAAATAACTTGGTATGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCTGCCACAGCTAAAAGGACAAAAAGGAGAGCTGTTGCAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTGTGAAGAAATTGAAATCTAAGAGTACTTAG

Protein sequence

MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPLQKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMVVLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQEQDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLTAESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNNEQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQKHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST

Homology

[Close]

BLAST of CmoCh05G007630 vs. ExPASy Swiss-Prot
Match: Q91YK2 (Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b PE=1 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 2.6e-24
Identity = 79/228 (34.65%), Postives = 121/228 (53.07%), Query Frame = 0


Query: 18  LASSNKATRDKTLRVIIKTWLPTQT-----SLSDGDMKKLWKGLFYCVWHADKAPVQSEL 77
           LASS K  RD+ +R  ++ +L  +T     S S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGVRDRAVRK-LRQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 78  INRLASLLLHLDLPLAVQYFSV--FLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLK 137
            N + S L+H+   L  QY  +  F  TM REW GID L+LDK+Y+LIR  L Q F +LK
Sbjct: 76  AN-IISQLIHVVNSLEAQYLFIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEVLK 135

Query: 138 KHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPF--LPLQKEVVDIL 197
           +++W+       + +L + +   + +   +GV   +  V+LEEL       L  +    L
Sbjct: 136 RNAWEESQITLFLDILMKEILSPESQ-SPNGVRTHLIDVYLEELTTVGGAELLADQNLKL 195

Query: 198 FKPFIYSMAKLSDKVLLGKIKSNLFDVILKMG----KQLLERRKCGED 233
             PF    AK  D  L+  +   +F+VI+       ++ +E RK  ED
Sbjct: 196 IDPFCRIAAKTKDHTLVQTVARGVFEVIVDQSACVPQESVEERKTKED 240

[Close]

BLAST of CmoCh05G007630 vs. ExPASy Swiss-Prot
Match: Q14684 (Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE=1 SV=3)

HSP 1 Score: 106.7 bits (265), Expect = 9.2e-22
Identity = 72/215 (33.49%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 12  VSLVKLLASSNKATRDKTLR-----VIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKA 71
           +   + LASS K  RD+ ++     + +KT   T    S  ++ K+WKGLFYC+W  D+ 
Sbjct: 10  IQFAQRLASSEKGIRDRAVKKLRQYISVKTQRET-GGFSQEELLKIWKGLFYCMWVQDEP 69

Query: 72  PVQSELINRLASLLLHLDLPLAVQYF-SVFLLTMRREWAGIDALRLDKFYLLIRRFLHQF 131
            +Q EL N +A L+  ++   A   F   F  TM REW GID LRLDK+Y+LIR  L Q 
Sbjct: 70  LLQEELANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQS 129

Query: 132 FALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPLQKEVV 191
           F +LK++ W+    +  + VL + V   + +   +GV +    ++L+EL   +  ++ + 
Sbjct: 130 FEVLKRNGWEESRIKVFLDVLMKEVLCPESQ-SPNGVRFHFIDIYLDELSK-VGGKELLA 189

Query: 192 DILFK---PFIYSMAKLSDKVLLGKIKSNLFDVIL 218
           D   K   PF    AK  D  L+  I   +F+ I+
Sbjct: 190 DQNLKFIDPFCKIAAKTKDHTLVQTIARGVFEAIV 221

[Close]

BLAST of CmoCh05G007630 vs. ExPASy Swiss-Prot
Match: P56183 (Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE=1 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-21
Identity = 76/242 (31.40%), Postives = 116/242 (47.93%), Query Frame = 0


Query: 12  VSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKA 71
           + L + LA + + TRD+ LR + K ++  ++  + G     ++ K+WKGLFYC+W  DK 
Sbjct: 11  IQLAQRLAGNEQVTRDRALRKLRK-YIEARSQRATGGFTPDELLKVWKGLFYCMWMQDK- 70

Query: 72  PVQSELINRLASLLLHL--DLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQ 131
           P+Q E + R  + L+H         Q+   F  TM REW GID LRLDKFY+L+R  L +
Sbjct: 71  PLQQEELGRTIAQLVHAFHTTEAQHQFLKAFWQTMIREWVGIDRLRLDKFYMLMRMVLSE 130

Query: 132 FFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPLQKEV 191
               +K   WD     + +++L   +   D +   SGV      +FLEEL      +   
Sbjct: 131 SLKAVKARGWDERQIEQLLELLTTEILNPDSQ-APSGVKSHFLEIFLEELAKVGAAELTA 190

Query: 192 VDIL--FKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLE------RRKCGEDVDSD 239
              L    PF    A+  D  +L KI  ++F  I++     +E        + GE   SD
Sbjct: 191 DQNLQFIDPFCQIAARTKDSQVLHKIIQSIFQTIVEQAPLAIEDIMNELDTQSGEGEASD 249

[Close]

BLAST of CmoCh05G007630 vs. ExPASy Swiss-Prot
Match: P56182 (Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.6e-21
Identity = 74/243 (30.45%), Postives = 120/243 (49.38%), Query Frame = 0


Query: 12  VSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKA 71
           + L + LA + + TRD+ +R + K ++  +T  + G     ++ K+WKGLFYC+W  DK 
Sbjct: 11  IQLAQRLAGNEQVTRDRAVRKLRK-YIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDKP 70

Query: 72  PVQSELINRLASLLLHLDLPLAVQ--YFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQ 131
            +Q EL  R  S L+H       Q  +   F  TM REW GID LRLDKFY+L+R  L++
Sbjct: 71  LLQEEL-GRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLNE 130

Query: 132 FFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPLQKEV 191
              +LK   W+       +++L   +     +   +GV      +FLEEL   +  ++  
Sbjct: 131 SLKVLKMQGWEERQIEELLELLMTEILHPSSQ-APNGVKSHFIEIFLEELTK-VGAEELT 190

Query: 192 VDILFK---PFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMVV 245
            D   K   PF    A+  D ++L  I   +F+ I++     +E      ++D+ D+ V 
Sbjct: 191 ADQNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIE--DLLNELDTQDEEVA 247

[Close]

BLAST of CmoCh05G007630 vs. ExPASy Swiss-Prot
Match: Q9Y7M6 (Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC9B6.07 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.0e-20
Identity = 72/210 (34.29%), Postives = 110/210 (52.38%), Query Frame = 0


Query: 15  VKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKAPVQSELIN 74
           +K LA++++ TRDK L   ++ +L  +      D  KLWKGLFYC+W ADK   Q +L +
Sbjct: 8   IKKLAANDRKTRDKALE-SLQRFLSQKKKFERLDFLKLWKGLFYCMWMADKPLYQQKLSD 67

Query: 75  RLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKHSW 134
            LA+L+  + +   + + S F  TM REW GID LR DKFYLL+RRF    F  ++  S 
Sbjct: 68  NLAALVPIVWIDNRILFQSTFWETMGREWTGIDILRTDKFYLLMRRFCAAAFRDIQTRSK 127

Query: 135 DL---ELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPLQKEVVDILFKP 194
                ++     Q+  +  F T++  + +G+ + +A ++ EELR   P      D  + P
Sbjct: 128 TALLDKVVAEYNQMWMDGPFNTENLAFPNGILFHLADIWTEELRKVYPEDVPKAD-WYLP 187

Query: 195 FIYSMAKLSDKVLLGKIKSNLFDVILKMGK 222
           F  S  K S  V+L K      D + +  K
Sbjct: 188 F-DSTIKSSHNVVLRKTLPKRLDRVSEYTK 214

[Close]

BLAST of CmoCh05G007630 vs. ExPASy TrEMBL
Match: A0A6J1ENE5 (ribosomal RNA processing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436194 PE=4 SV=1)

HSP 1 Score: 1120.5 bits (2897), Expect = 0.0e+00
Identity = 590/590 (100.00%), Postives = 590/590 (100.00%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240
           QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV
Sbjct: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240

Query: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360
           QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT
Sbjct: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360

Query: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420
           AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQ
Sbjct: 421 EQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQ 480

Query: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 591
           ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST
Sbjct: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of CmoCh05G007630 vs. ExPASy TrEMBL
Match: A0A6J1K5Q1 (ribosomal RNA processing protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491909 PE=4 SV=1)

HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 570/590 (96.61%), Postives = 581/590 (98.47%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFA LKKHSWDLELCRRSVQVLEERVFFTDDKF+GSGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFAFLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240
           QK+V+DILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDS DDMV
Sbjct: 181 QKDVIDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSGDDMV 240

Query: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           VLGSISLTNLFSTTFY+LGSSPDCCQGNRKVLF+MHEEYQKLEKDIISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFSMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360
           QDV+EVPTLVPVSSE E PSEIS VDVDITAESTDKAHKKKKK+KKATPSEISMLDVDLT
Sbjct: 301 QDVNEVPTLVPVSSEGEAPSEISVVDVDITAESTDKAHKKKKKNKKATPSEISMLDVDLT 360

Query: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420
           AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQI DGNMIALDESVISNLQ+QFE+VASEA+FG NVVSPV+STNGSVKKRKRAKNVDGLQ
Sbjct: 421 EQISDGNMIALDESVISNLQMQFERVASEAEFGVNVVSPVVSTNGSVKKRKRAKNVDGLQ 480

Query: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 591
           ALKKGIPPGPILEFPATAKR KRRAV MRAKKGVRSLPVKRVKKLKSKST
Sbjct: 541 ALKKGIPPGPILEFPATAKRAKRRAVVMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of CmoCh05G007630 vs. ExPASy TrEMBL
Match: A0A5A7U008 (Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00010 PE=4 SV=1)

HSP 1 Score: 933.3 bits (2411), Expect = 4.9e-268
Identity = 499/596 (83.72%), Postives = 521/596 (87.42%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR  VQVLEERVFFTDDKF+G+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240
           QKEVVD+LFKPF+ SMAKL DKVL GKIKSNLFDVILKMGKQLLE RK G+D+DS DD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           V G+ISLTN FSTTFY+LGSSPDCCQGNRKVLFAMHEE+QKLEKD  SSGIEISFPDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360
           QD DEVPTLVP+ SEEE PSEIS VDVD+ AESTDKA                       
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKA----------------------- 360

Query: 361 AESTDKPLKKQKKNKKATDGSGK------KKTKKTTNGSSDLVSENTTVNKDNENIVASN 420
                  LKKQK++KKATDGSGK      KK KKTTNG SDLVSEN+  NKDNENIV +N
Sbjct: 361 -------LKKQKRSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENSPANKDNENIVVAN 420

Query: 421 GENSNNEQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAK 480
           GENSNNEQI DGNMI  DE+VISNLQ+QFEKVA+EADFGD++VSPVISTNGSVKKRKRAK
Sbjct: 421 GENSNNEQISDGNMITFDETVISNLQMQFEKVAAEADFGDSIVSPVISTNGSVKKRKRAK 480

Query: 481 NVDGLQKHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540
           NVD LQKHDV LPSE  AEGNTA KS EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS
Sbjct: 481 NVDELQKHDVALPSEAQAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540

Query: 541 VTPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 591
           VTPRGSALKKGIPPGPILEFPAT KRTKRRAV+MR KKGVRSLPVKR+KKLKSKST
Sbjct: 541 VTPRGSALKKGIPPGPILEFPATTKRTKRRAVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of CmoCh05G007630 vs. ExPASy TrEMBL
Match: A0A1S3BR64 (ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492297 PE=4 SV=1)

HSP 1 Score: 933.3 bits (2411), Expect = 4.9e-268
Identity = 499/596 (83.72%), Postives = 521/596 (87.42%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR  VQVLEERVFFTDDKF+G+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240
           QKEVVD+LFKPF+ SMAKL DKVL GKIKSNLFDVILKMGKQLLE RK G+D+DS DD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           V G+ISLTN FSTTFY+LGSSPDCCQGNRKVLFAMHEE+QKLEKD  SSGIEISFPDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360
           QD DEVPTLVP+ SEEE PSEIS VDVD+ AESTDKA                       
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKA----------------------- 360

Query: 361 AESTDKPLKKQKKNKKATDGSGK------KKTKKTTNGSSDLVSENTTVNKDNENIVASN 420
                  LKKQK++KKATDGSGK      KK KKTTNG SDLVSEN+  NKDNENIV +N
Sbjct: 361 -------LKKQKRSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENSPANKDNENIVVAN 420

Query: 421 GENSNNEQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAK 480
           GENSNNEQI DGNMI  DE+VISNLQ+QFEKVA+EADFGD++VSPVISTNGSVKKRKRAK
Sbjct: 421 GENSNNEQISDGNMITFDETVISNLQMQFEKVAAEADFGDSIVSPVISTNGSVKKRKRAK 480

Query: 481 NVDGLQKHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540
           NVD LQKHDV LPSE  AEGNTA KS EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS
Sbjct: 481 NVDELQKHDVALPSEAQAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540

Query: 541 VTPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 591
           VTPRGSALKKGIPPGPILEFPAT KRTKRRAV+MR KKGVRSLPVKR+KKLKSKST
Sbjct: 541 VTPRGSALKKGIPPGPILEFPATTKRTKRRAVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of CmoCh05G007630 vs. ExPASy TrEMBL
Match: A0A0A0LGX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062650 PE=4 SV=1)

HSP 1 Score: 916.8 bits (2368), Expect = 4.7e-263
Identity = 493/596 (82.72%), Postives = 515/596 (86.41%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRR VQVLEERV+F +DKF+G+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240
           QKEVVD+LFKPF+ SM KL DKVLLGKIKSNLFDVILK GKQLLE RK G+DVDS DD V
Sbjct: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240

Query: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           V G++SLTN FSTTFY+LGSSPDCCQGNRKVLFAMHEE+QKLEKD  SSGIEISFPDLQE
Sbjct: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360
           QD DEVPTLVP+SS EE PSEIS VDVD+  ESTDKA                       
Sbjct: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKA----------------------- 360

Query: 361 AESTDKPLKKQKKNKKATDGSGK------KKTKKTTNGSSDLVSENTTVNKDNENIVASN 420
                  LKKQKK+KKATDGSGK      KK KKTTNG SDLVSENT  NKDNENIV +N
Sbjct: 361 -------LKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN 420

Query: 421 GENSNNEQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAK 480
           GENSNNEQI DGNMI  DE+VISNLQ+QFE+VA+EADFG + VSPVISTNGSVKKRKRAK
Sbjct: 421 GENSNNEQISDGNMITFDETVISNLQMQFERVAAEADFGKSTVSPVISTNGSVKKRKRAK 480

Query: 481 NVDGLQKHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540
           NV  LQKHD  LPSE  AEGNTA KS EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS
Sbjct: 481 NVGELQKHDAGLPSEAVAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540

Query: 541 VTPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 591
           VTPRGSALKKGIPPGPILEFPAT KRTKRRAV+MR K GVRSLPVKR+KKLKSKST
Sbjct: 541 VTPRGSALKKGIPPGPILEFPATTKRTKRRAVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of CmoCh05G007630 vs. NCBI nr
Match: XP_022929687.1 (ribosomal RNA processing protein 1 homolog [Cucurbita moschata] >XP_022929688.1 ribosomal RNA processing protein 1 homolog [Cucurbita moschata])

HSP 1 Score: 1120.5 bits (2897), Expect = 0.0e+00
Identity = 590/590 (100.00%), Postives = 590/590 (100.00%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240
           QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV
Sbjct: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240

Query: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360
           QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT
Sbjct: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360

Query: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420
           AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQ
Sbjct: 421 EQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQ 480

Query: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 591
           ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST
Sbjct: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of CmoCh05G007630 vs. NCBI nr
Match: XP_023546269.1 (ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023546270.1 ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023546272.1 ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1099.3 bits (2842), Expect = 0.0e+00
Identity = 579/590 (98.14%), Postives = 585/590 (99.15%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKF GSGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFPGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240
           QKEV+DILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDS DDMV
Sbjct: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSGDDMV 240

Query: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           VLGSISLTNLFSTTFY+LGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360
           QDVDEVPTLVPVSSE E PSEISAVDVDITAESTDKAHKKKKK+KKATPSEISMLDVDLT
Sbjct: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKAHKKKKKNKKATPSEISMLDVDLT 360

Query: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420
           AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQI DGNMIALDESVISNLQIQFE+VASEADFGDN++SPVISTNGSVKKRKRAKNVDGLQ
Sbjct: 421 EQISDGNMIALDESVISNLQIQFERVASEADFGDNLLSPVISTNGSVKKRKRAKNVDGLQ 480

Query: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 591
           ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST
Sbjct: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of CmoCh05G007630 vs. NCBI nr
Match: KAG6598904.1 (Ribosomal RNA processing protein 1-like B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1097.4 bits (2837), Expect = 0.0e+00
Identity = 577/590 (97.80%), Postives = 583/590 (98.81%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKF+GSGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240
           QKEV+DILFKPFIYSMAKLSDKVLLGKIKS+LFDVILKMGKQLLERRKCGEDVDS DDMV
Sbjct: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMV 240

Query: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           VLGSISLTNLFSTTFY+LGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360
           QDVDEVPTLVPVSSE E PSEISAVDVDITAESTDK HKKKKKHKKATPSEISMLDVDLT
Sbjct: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKATPSEISMLDVDLT 360

Query: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420
           AESTDKPLKKQKKNKKATDGSGKKKTKKTTN S DLVSENTTVNKDNENIVASNGENSNN
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQIGDGNMIALDESVISNLQIQFE+VASEADFGDN+VSPVISTNGSVKKRKRAKNVDGLQ
Sbjct: 421 EQIGDGNMIALDESVISNLQIQFERVASEADFGDNLVSPVISTNGSVKKRKRAKNVDGLQ 480

Query: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDVVLP EVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 591
           ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST
Sbjct: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of CmoCh05G007630 vs. NCBI nr
Match: KAG7029862.1 (Ribosomal RNA processing protein 1-like B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 576/590 (97.63%), Postives = 583/590 (98.81%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKF+GSGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240
           QKEV+DILFKPFIYSMAKLSDKVLLGKIKS+LFDVILKMGKQLLERRKCGEDVDS DDMV
Sbjct: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSSLFDVILKMGKQLLERRKCGEDVDSGDDMV 240

Query: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           VLGSISLTNLFSTTFY+LGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360
           QDVDEVPTLVPVSSE E PSEISAVDVDITAESTDK HKKKKKHKKATPSEISMLDVDLT
Sbjct: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKEHKKKKKHKKATPSEISMLDVDLT 360

Query: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420
           AESTDKPLKKQKKNKKATDGSGKKKTKKTTN S DLVSENTTVNKDNENIVASNGENSNN
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNASFDLVSENTTVNKDNENIVASNGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQIGDGNMIALDESVISNLQIQFE+VASEADFGDN+VSPVISTNGSVKKRKRAKNVDGLQ
Sbjct: 421 EQIGDGNMIALDESVISNLQIQFERVASEADFGDNLVSPVISTNGSVKKRKRAKNVDGLQ 480

Query: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDVVLP EVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVVLPGEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 591
           ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKS+ST
Sbjct: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSRST 590

[Close]

BLAST of CmoCh05G007630 vs. NCBI nr
Match: XP_022996774.1 (ribosomal RNA processing protein 1 homolog [Cucurbita maxima] >XP_022996775.1 ribosomal RNA processing protein 1 homolog [Cucurbita maxima] >XP_022996776.1 ribosomal RNA processing protein 1 homolog [Cucurbita maxima])

HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 570/590 (96.61%), Postives = 581/590 (98.47%), Query Frame = 0


Query: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180
           FLHQFFA LKKHSWDLELCRRSVQVLEERVFFTDDKF+GSGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFAFLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240
           QK+V+DILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDS DDMV
Sbjct: 181 QKDVIDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSGDDMV 240

Query: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300
           VLGSISLTNLFSTTFY+LGSSPDCCQGNRKVLF+MHEEYQKLEKDIISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFSMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360
           QDV+EVPTLVPVSSE E PSEIS VDVDITAESTDKAHKKKKK+KKATPSEISMLDVDLT
Sbjct: 301 QDVNEVPTLVPVSSEGEAPSEISVVDVDITAESTDKAHKKKKKNKKATPSEISMLDVDLT 360

Query: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420
           AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420

Query: 421 EQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKNVDGLQ 480
           EQI DGNMIALDESVISNLQ+QFE+VASEA+FG NVVSPV+STNGSVKKRKRAKNVDGLQ
Sbjct: 421 EQISDGNMIALDESVISNLQMQFERVASEAEFGVNVVSPVVSTNGSVKKRKRAKNVDGLQ 480

Query: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 591
           ALKKGIPPGPILEFPATAKR KRRAV MRAKKGVRSLPVKRVKKLKSKST
Sbjct: 541 ALKKGIPPGPILEFPATAKRAKRRAVVMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of CmoCh05G007630 vs. TAIR 10
Match: AT5G20600.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). )

HSP 1 Score: 449.1 bits (1154), Expect = 5.4e-126
Identity = 267/575 (46.43%), Postives = 360/575 (62.61%), Query Frame = 0


Query: 13  SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKAPVQSEL 72
           SL+K LAS  ++ RD++LR +++TWLP QT +SD DMKKLW+G+FYCVWHADK+  QSEL
Sbjct: 22  SLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDEDMKKLWQGIFYCVWHADKSLYQSEL 81

Query: 73  INRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKH 132
           I+RL+S L  L LPL++ YF+VFL TMRREW+ ID LRLDKFYLLIRRFLH FF+L+  +
Sbjct: 82  IDRLSSALQSLPLPLSIHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRFLHGFFSLIDSN 141

Query: 133 SWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPLQKEVVDILFKPF 192
           SWDLE  RR + +L +     DDKF G+GVNY I S F+EELRPFLPL+KEV+++LF PF
Sbjct: 142 SWDLEFTRRLMGILFDGTLLADDKFQGNGVNYHITSAFVEELRPFLPLRKEVLELLFAPF 201

Query: 193 IYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGED-VDSDDDMVVLGSISLTNLF 252
           +  M  ++DK+L+GKIKSNLFD +LKMGK+LL  ++ G+D V  DDD+VVLGSI+L+  F
Sbjct: 202 VKIMGVVNDKILVGKIKSNLFDELLKMGKKLLIIKQSGDDAVPEDDDVVVLGSIALSMEF 261

Query: 253 STTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQEQDVDEVPTLVP 312
           +  FY+LGSSP+C QGNRK++FA+H+E+ +LEKD+ SS IE+S  +      DEVP  VP
Sbjct: 262 AKRFYELGSSPECHQGNRKLIFALHKEFLQLEKDMSSSSIEVSIVEASRPGNDEVPESVP 321

Query: 313 VSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLTAESTDKPLKKQ 372
           VS                                                ES    + K 
Sbjct: 322 VS------------------------------------------------ESNTNVVSKS 381

Query: 373 KKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNNEQIGDGNMIAL 432
           KK       S KK  KK +    D V +          ++ S  +  N ++       + 
Sbjct: 382 KKIVANGSSSKKKGLKKCSKTKKDSVKKGA--------VMDSVVDLGNKDE-------SF 441

Query: 433 DESVISNLQIQFEKVASEADFGDNVVSPV--ISTNGSVKKRKRAKNVDGLQKHDVVLPSE 492
           DE++IS+L+ +FEK+ASE     + V+ V  ++   SV K+ + +  +   +  V   + 
Sbjct: 442 DETMISDLRQEFEKIASEMSPSKSEVASVCDVAEPVSVSKKTKKRKRENKGEEQVSTVNR 501

Query: 493 VDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPG 552
             AE + A  S EKS K+VRF+MKNNLVWKPH PLPP+ LR PPS TPRGSALK+GIP G
Sbjct: 502 DAAETSLAGPSSEKSSKRVRFAMKNNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAG 528

Query: 553 PILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKK 585
           P+ E    A R  ++ V   A++GV+S  +K +KK
Sbjct: 562 PVREL---ASRKTKKKVKPAARRGVKS--IKNLKK 528

The following BLAST results are available for this feature:

BLAST of CmoCh05G007630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91YK2	2.6e-24	34.65	Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b P...	[more]
Q14684	9.2e-22	33.49	Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE...	[more]
P56183	2.1e-21	31.40	Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE...	[more]
P56182	4.6e-21	30.45	Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=...	[more]
Q9Y7M6	3.0e-20	34.29	Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain ...	[more]

BLAST of CmoCh05G007630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENE5	0.0e+00	100.00	ribosomal RNA processing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1K5Q1	0.0e+00	96.61	ribosomal RNA processing protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5A7U008	4.9e-268	83.72	Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BR64	4.9e-268	83.72	ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]
A0A0A0LGX3	4.7e-263	82.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062650 PE=4 SV=1	[more]

BLAST of CmoCh05G007630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929687.1	0.0e+00	100.00	ribosomal RNA processing protein 1 homolog [Cucurbita moschata] >XP_022929688.1 ...	[more]
XP_023546269.1	0.0e+00	98.14	ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
KAG6598904.1	0.0e+00	97.80	Ribosomal RNA processing protein 1-like B, partial [Cucurbita argyrosperma subsp...	[more]
KAG7029862.1	0.0e+00	97.63	Ribosomal RNA processing protein 1-like B, partial [Cucurbita argyrosperma subsp...	[more]
XP_022996774.1	0.0e+00	96.61	ribosomal RNA processing protein 1 homolog [Cucurbita maxima] >XP_022996775.1 ri...	[more]

BLAST of CmoCh05G007630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20600.1	5.4e-126	46.43	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010301	Nucleolar, Nop52	PFAM	PF05997	Nop52	coord: 13..214 e-value: 1.1E-55 score: 188.8
IPR010301	Nucleolar, Nop52	PANTHER	PTHR13026	NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52	coord: 13..574
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 391..423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 524..553
None	No IPR available	PANTHER	PTHR13026:SF0	RIBOSOMAL RNA-PROCESSING 1	coord: 13..574

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G007630.1	CmoCh05G007630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0030688	preribosome, small subunit precursor