CmoCh05G007340 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G007340
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	nifU-like protein 3, chloroplastic
Location	Cmo_Chr05: 3850147 .. 3852893 (-)
RNA-Seq Expression	CmoCh05G007340
Synteny	CmoCh05G007340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGGCTCCCTTTATCCACATTCTCCCTTTTCTCCTTCCCAATTTCCAGCCACAAAATTTGGCCACACCAATGACGATCTTCATCTTTATCACCCAATCACTGTGTTTCCCTTCTGCAAAATTCATAACCCAAACACATTGCCCTAACTCAGCACCGCATCCCACTGTTTATGAGTCTTCATAGCTCGCATTCCAATGGTAGCCGCTTTCTCAACTCGAGCTCAAGCTCTTAAACCAACTCCAACCACTGCAACTCTGTATCGGTCACCGTCTGAGCGAACTTCGGCTTCCCATTTGTCATTCTTCAAGGTTGGTTTCTTGATTCTGTTTTTGATCTTCTGCAATTCCCTTGTTTTGTTTGTGCAAGTTTTTATTAGGCAACTGATTGGGCGGTATTGTTTGAATCAGAGTTCGTTCTTTAGAGGTCAATTTTGTAGCCGGCGCTTTCTTGGATTCAACTCAAGTTGTACTCGGAGGCGTCATTTAGGTAGCATTTCTGGATTTTGCTTTTACGATGATCCATAACGAATATGAAAATTTGGCTATTCTTGGAGTGATGGGATGATAGATTCAAGATCATGTGACAGCGTTAGATGCCATTTCTCTTCCAAATTCCAATTTCCTGCTTCTTTTCTCTACTGAATGCTTATAACTGAAACCATTAGGTCTGTAACATTCTGAATGAGCTTATCGTGTATCAGTGAGATCCCACATCGGTTGGAGAGTAGAATGAAAAATTCTTTATAAGGGTGTGAAAACCTCCCCTAGCGCATTTTGAAAGCTAGAGAAACCCAAAAGAGCAAAGAGGACAATATTTACTAGCATTGGGCTTGAGTCGTTACAAATGGTATCAGAGCCAGACACCGGGTGATTTGTTAGCGAGGAGGTGTGCCAGCAATGACGCTAGGCTTCGAAGGAAGGTGGATTGGGGAGTCCCATATCAATTGAAGAAGGGAACAAGTGCTAGCGAGAACGCTGGACCCCGAAGGGGGTGGATTATGAGATCCCACATCGATTGAGTTGGAGAACGAAGGATTCTTTATAAGGGTGTGGAAACCTCCCCTAGCAGACACGTTTGAAAAGCCATGAGGAGAAAGAGAAAACCCAAAGAGGACAATATCGGCTAGCGGTGGACTTGGGACGTTACAAATAGATGTGTCAGCTAGGAGGCTGAGCCTTAAAGGGGGTGGACACAAGGTGGTGTGCGAGCCAGGACACTAGGCTCCGAAGGGGATGGATTGGAGGGTCCCGCATCGATTGGAGAAGGGAACGAGTGCCAGCGAGGACGCTAGACCCTGGGGGGTGGATAGTGAGATCCCACATCGGATGGGGAGGAGAACGAAACATTTTTTATAAAGGTGTGGAAACCTCCCCTGGCAGACGCGTTTTAAAAGCCTTGAGGAGAAACTTGTTCATCCTAGTTCATAGTCTCTAGTCATCCAGTTAGTATAGTAAGTAAGAAACTATTAAGAACAAACTAGTAACTAAAACTAATTAACAAATTTTGACTGGAATTTGATGGGTTTTGGTGTTCGTAAGGAAACGTGGTGTCACCCAGTTGTGTTCTTCCATTGACTGAGGAAAATGTGGAGAAAGTGTTGGACGAAGTAAGGCCAAGCCTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGCTCTTGCCCAAGCTCAACCATGACACTCAAAATGGGAATCGAGACCAGACTCAGAGACAAAATTCCTGAAATTTTGGAAGTTGAGCAGATCATAGACACTGAAACAGGACTTGAACTCAACCACGACAATGTTGAAAAGGTCAGATTCTCTGTTCAATTCTCTGCTATGTTACGAATTTAATAACACTTGCATAGATGATCATAGAATTTCTTTGCAACAACTTAACTGATACACGAAGCATGCTATGTTCTGGTTTATATGTTTAGATACGGTTAGTAGGTATTGTTTTCTTTGATCTTTTTTCTTAGGCTTCCCTCAAGATTTTAAAACGCGTTTATTAGAGAAAGGTTTCCATACAAAGAATGTTTCGTTCTCCTCTCCAACCGACGGGGGATTTCACAATCCACCCTCCTTGGGGACTTAGCATCATTGCTAGCACAAAACCCAGGGCACCGATACCATTTGTAATGGCTCAAGCCCACCATTAATAAATATTGTCTTCTTTAGGTTTTCTCTTTTGGACTTCCCCTCAAGATTTTTAAAATGTGTCTGCTAGGGATAAGTTTCCACACCCTCATAAAGAATGTTTCGTTCTCCTCTTCAACTGACGTGAGATTTCACAAATCCACCCATTTGAGGCCCAGCGTTCTCGTTGATACTCGTTTTTCTCTCTAATCGATGTGGGATCTCACGCATTGTTATATATATATGATCGACTAAAAAGATTAGAGGTTCGAAAGTCGGGTATGTTTTTCAGTTACTTGCAGAGATTAGGCCATACTTGGCTGGGACAGGGGGTGGAATTCTGGAGCTGATAGAGATAAAAGATTACGTTGTTAAAGTGCGGCTGAGTGGACCAGCAGCTGGAGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGGGAGAAAATACCAGCCATTGCAGCTGTGCAGCTTATAGAATAGAACCAGCTTTGATTCAGACATGCTCACCTCATTTTCTCTTTTCATTTCATTATTTTCTCTTCATTGATTTCTGAACTATAAGAGTGACAGAGAAAAAG

mRNA sequence

TGTGGCTCCCTTTATCCACATTCTCCCTTTTCTCCTTCCCAATTTCCAGCCACAAAATTTGGCCACACCAATGACGATCTTCATCTTTATCACCCAATCACTGTGTTTCCCTTCTGCAAAATTCATAACCCAAACACATTGCCCTAACTCAGCACCGCATCCCACTGTTTATGAGTCTTCATAGCTCGCATTCCAATGGTAGCCGCTTTCTCAACTCGAGCTCAAGCTCTTAAACCAACTCCAACCACTGCAACTCTGTATCGGTCACCGTCTGAGCGAACTTCGGCTTCCCATTTGTCATTCTTCAAGAGTTCGTTCTTTAGAGGTCAATTTTGTAGCCGGCGCTTTCTTGGATTCAACTCAAGTTGTACTCGGAGGCGTCATTTAGGAAACGTGGTGTCACCCAGTTGTGTTCTTCCATTGACTGAGGAAAATGTGGAGAAAGTGTTGGACGAAGTAAGGCCAAGCCTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGCTCTTGCCCAAGCTCAACCATGACACTCAAAATGGGAATCGAGACCAGACTCAGAGACAAAATTCCTGAAATTTTGGAAGTTGAGCAGATCATAGACACTGAAACAGGACTTGAACTCAACCACGACAATGTTGAAAAGTTACTTGCAGAGATTAGGCCATACTTGGCTGGGACAGGGGGTGGAATTCTGGAGCTGATAGAGATAAAAGATTACGTTGTTAAAGTGCGGCTGAGTGGACCAGCAGCTGGAGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGGGAGAAAATACCAGCCATTGCAGCTGTGCAGCTTATAGAATAGAACCAGCTTTGATTCAGACATGCTCACCTCATTTTCTCTTTTCATTTCATTATTTTCTCTTCATTGATTTCTGAACTATAAGAGTGACAGAGAAAAAG

Coding sequence (CDS)

ATGGTAGCCGCTTTCTCAACTCGAGCTCAAGCTCTTAAACCAACTCCAACCACTGCAACTCTGTATCGGTCACCGTCTGAGCGAACTTCGGCTTCCCATTTGTCATTCTTCAAGAGTTCGTTCTTTAGAGGTCAATTTTGTAGCCGGCGCTTTCTTGGATTCAACTCAAGTTGTACTCGGAGGCGTCATTTAGGAAACGTGGTGTCACCCAGTTGTGTTCTTCCATTGACTGAGGAAAATGTGGAGAAAGTGTTGGACGAAGTAAGGCCAAGCCTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGCTCTTGCCCAAGCTCAACCATGACACTCAAAATGGGAATCGAGACCAGACTCAGAGACAAAATTCCTGAAATTTTGGAAGTTGAGCAGATCATAGACACTGAAACAGGACTTGAACTCAACCACGACAATGTTGAAAAGTTACTTGCAGAGATTAGGCCATACTTGGCTGGGACAGGGGGTGGAATTCTGGAGCTGATAGAGATAAAAGATTACGTTGTTAAAGTGCGGCTGAGTGGACCAGCAGCTGGAGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGGGAGAAAATACCAGCCATTGCAGCTGTGCAGCTTATAGAATAG

Protein sequence

MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTRRRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGILELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE

Homology

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BLAST of CmoCh05G007340 vs. ExPASy Swiss-Prot
Match: Q84RQ7 (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.0e-69
Identity = 141/192 (73.44%), Postives = 163/192 (84.90%), Query Frame = 0


Query: 39  SSFFRGQFCSRRF--LGFNSSCTRRRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADG 98
           S+F RGQF    F  L       +R   G+V   SCV+PLTEENVE+VLDEVRPSLMADG
Sbjct: 48  STFLRGQFQRIHFSWLQHTRPLRKRTVFGHV---SCVMPLTEENVERVLDEVRPSLMADG 107

Query: 99  GNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIIDTET-GL 158
           GNVALHEIDGLVV+LKLQGACGSCPSS+MTLKMGIE+RLRDKIPEI+ VEQ +++ET GL
Sbjct: 108 GNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGL 167

Query: 159 ELNHDNVEKLLAEIRPYLAGTGGGILELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLRE 218
           ELN +N+EK+L+E+RPYL+GTGGG LEL+EI  YVVKVRL+GPAAGVMTVRVALTQKLRE
Sbjct: 168 ELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRE 227

Query: 219 KIPAIAAVQLIE 228
            IP+I AVQL+E
Sbjct: 228 TIPSIGAVQLLE 236

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BLAST of CmoCh05G007340 vs. ExPASy Swiss-Prot
Match: Q93W20 (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU2 PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.5e-60
Identity = 130/222 (58.56%), Postives = 161/222 (72.52%), Query Frame = 0


Query: 7   TRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTRRRHLGN 66
           T  QA+ P+ +++ L   P   +S   L          +    RFL       R + +  
Sbjct: 14  TPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSRQLFRRSKVVKA 73

Query: 67  VVSPSCVL--PLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSST 126
           V +P  +L  PLTEENVE VLDE+RP LM+DGGNVALHEIDG +V +KLQGACGSCPSST
Sbjct: 74  VATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSST 133

Query: 127 MTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGILELI 186
           MT+KMGIE RL +KIPEI+ VE + D ETGLELN +N+EK+L EIRPYL GT  G L+L+
Sbjct: 134 MTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLV 193

Query: 187 EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLI 227
           EI+D +VK+R++GPAAGVMTVRVA+TQKLREKIP+IAAVQLI
Sbjct: 194 EIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

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BLAST of CmoCh05G007340 vs. ExPASy Swiss-Prot
Match: Q84LK7 (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.7e-51
Identity = 105/153 (68.63%), Postives = 125/153 (81.70%), Query Frame = 0


Query: 74  LPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIET 133
           LPLT  NVE VLD+VRP L ADGG+VALHEI G VV LKLQGACGSCPSS +T+K GIE 
Sbjct: 73  LPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIER 132

Query: 134 RLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGILELIEIKDYVVKV 193
           RL +KIP++  VE + D ETGLELN +NVEK+L EIRPYLAGTGGG L+ + IK  +VKV
Sbjct: 133 RLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKV 192

Query: 194 RLSGPAAGVMTVRVALTQKLREKIPAIAAVQLI 227
           RL+GPAA V TVR+A+++KLREKIP+I  VQL+
Sbjct: 193 RLTGPAAVVRTVRIAVSKKLREKIPSIQIVQLL 225

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BLAST of CmoCh05G007340 vs. ExPASy Swiss-Prot
Match: Q93W77 (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.9e-18
Identity = 53/141 (37.59%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 76  LTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRL 135
           LT +NV+ VL++VRP L++DGGNV +  ++  VV LKLQGAC SCPSS+ T+ MGIE  L
Sbjct: 85  LTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVL 144

Query: 136 RDKIPEIL-EVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGILELIEIKDYVVKVR 195
           ++K  + L ++ Q+ D E   ++  + V   L  +RP +   GG + E++ ++     V+
Sbjct: 145 KEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRPAIKNYGGSV-EVLSVEGEDCVVK 204

Query: 196 LSGPAAGVMTVRVALTQKLRE 216
             GP +  M ++ A+ +K ++
Sbjct: 205 YVGPESIGMGIQAAIKEKFKD 223

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BLAST of CmoCh05G007340 vs. ExPASy Swiss-Prot
Match: P33179 (Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain L31) OX=29412 GN=nifU PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15
Identity = 43/69 (62.32%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 81  VEKVLD-EVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKI 140
           ++KVLD EVRP L+ADGG+V L+++DG +V + LQGACGSCPSST TLK+ IE+RLRD+I
Sbjct: 44  IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRI 103

Query: 141 PEILEVEQI 149
              L VE +
Sbjct: 104 NPSLVVEAV 112

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BLAST of CmoCh05G007340 vs. ExPASy TrEMBL
Match: A0A6J1EP39 (nifU-like protein 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436107 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.1e-118
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60
           MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR
Sbjct: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
           RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CmoCh05G007340 vs. ExPASy TrEMBL
Match: A0A6J1K7T6 (nifU-like protein 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492451 PE=3 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.0e-117
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60
           MVAAFSTRAQALKPTPTTA LYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR
Sbjct: 1   MVAAFSTRAQALKPTPTTAPLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
           RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

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BLAST of CmoCh05G007340 vs. ExPASy TrEMBL
Match: A0A0A0LMF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060370 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.1e-106
Identity = 206/227 (90.75%), Postives = 212/227 (93.39%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60
           MVA FSTRAQ  K TP  ATLYRSPS   S S+LSFFKSSFFRGQFCSR FL FNSSCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
            RHLGNVVSPSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEK+L+EIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LE+IEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CmoCh05G007340 vs. ExPASy TrEMBL
Match: A0A5D3BPX3 (NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00910 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.8e-104
Identity = 205/227 (90.31%), Postives = 210/227 (92.51%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60
           MVA FSTRAQ  K TP  ATLY S S  TS SHLS FKSSFFRGQFCSRRFL FN SCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
            R LGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRRLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEK+L+EIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LE+IEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CmoCh05G007340 vs. ExPASy TrEMBL
Match: A0A5A7U598 (NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00030 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.0e-104
Identity = 204/227 (89.87%), Postives = 210/227 (92.51%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60
           MVA FSTRAQ  K TP  ATLY S S  TS SHLS FKSSFFRGQFCSRRFL FN SCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
            R LGNV+SPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRRLGNVISPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEK+L+EIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LE+IEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CmoCh05G007340 vs. NCBI nr
Match: XP_022929559.1 (nifU-like protein 3, chloroplastic [Cucurbita moschata] >KAG6598879.1 NifU-like protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 434.9 bits (1117), Expect = 4.3e-118
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60
           MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR
Sbjct: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
           RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CmoCh05G007340 vs. NCBI nr
Match: KAG7029821.1 (NifU-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 433.0 bits (1112), Expect = 1.6e-117
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60
           MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFC RRFLGFNSSCTR
Sbjct: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCRRRFLGFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
           RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CmoCh05G007340 vs. NCBI nr
Match: XP_022997561.1 (nifU-like protein 3, chloroplastic [Cucurbita maxima] >XP_023545672.1 nifU-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-117
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60
           MVAAFSTRAQALKPTPTTA LYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR
Sbjct: 1   MVAAFSTRAQALKPTPTTAPLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
           RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CmoCh05G007340 vs. NCBI nr
Match: XP_038889481.1 (nifU-like protein 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107
Identity = 210/227 (92.51%), Postives = 216/227 (95.15%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60
           MVAAFSTRA  LK TP  ATLY SPSE TS SHLS FK+SFFRGQFCSRRFL FNSSCT+
Sbjct: 1   MVAAFSTRAHPLKSTPIAATLYCSPSEPTSPSHLSLFKTSFFRGQFCSRRFLRFNSSCTQ 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
           RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEK+LAEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLAEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LE+IEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CmoCh05G007340 vs. NCBI nr
Match: XP_004148324.1 (nifU-like protein 3, chloroplastic isoform X2 [Cucumis sativus] >KGN61156.1 hypothetical protein Csa_021276 [Cucumis sativus])

HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 206/227 (90.75%), Postives = 212/227 (93.39%), Query Frame = 0


Query: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60
           MVA FSTRAQ  K TP  ATLYRSPS   S S+LSFFKSSFFRGQFCSR FL FNSSCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60

Query: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120
            RHLGNVVSPSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEK+L+EIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 228
           LE+IEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CmoCh05G007340 vs. TAIR 10
Match: AT4G25910.1 (NFU domain protein 3 )

HSP 1 Score: 263.1 bits (671), Expect = 2.1e-70
Identity = 141/192 (73.44%), Postives = 163/192 (84.90%), Query Frame = 0


Query: 39  SSFFRGQFCSRRF--LGFNSSCTRRRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADG 98
           S+F RGQF    F  L       +R   G+V   SCV+PLTEENVE+VLDEVRPSLMADG
Sbjct: 48  STFLRGQFQRIHFSWLQHTRPLRKRTVFGHV---SCVMPLTEENVERVLDEVRPSLMADG 107

Query: 99  GNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIIDTET-GL 158
           GNVALHEIDGLVV+LKLQGACGSCPSS+MTLKMGIE+RLRDKIPEI+ VEQ +++ET GL
Sbjct: 108 GNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGL 167

Query: 159 ELNHDNVEKLLAEIRPYLAGTGGGILELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLRE 218
           ELN +N+EK+L+E+RPYL+GTGGG LEL+EI  YVVKVRL+GPAAGVMTVRVALTQKLRE
Sbjct: 168 ELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRE 227

Query: 219 KIPAIAAVQLIE 228
            IP+I AVQL+E
Sbjct: 228 TIPSIGAVQLLE 236

[Close]

BLAST of CmoCh05G007340 vs. TAIR 10
Match: AT5G49940.1 (NIFU-like protein 2 )

HSP 1 Score: 231.5 bits (589), Expect = 6.8e-61
Identity = 130/222 (58.56%), Postives = 161/222 (72.52%), Query Frame = 0


Query: 7   TRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTRRRHLGN 66
           T  QA+ P+ +++ L   P   +S   L          +    RFL       R + +  
Sbjct: 14  TPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSRQLFRRSKVVKA 73

Query: 67  VVSPSCVL--PLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSST 126
           V +P  +L  PLTEENVE VLDE+RP LM+DGGNVALHEIDG +V +KLQGACGSCPSST
Sbjct: 74  VATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSST 133

Query: 127 MTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGILELI 186
           MT+KMGIE RL +KIPEI+ VE + D ETGLELN +N+EK+L EIRPYL GT  G L+L+
Sbjct: 134 MTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLV 193

Query: 187 EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLI 227
           EI+D +VK+R++GPAAGVMTVRVA+TQKLREKIP+IAAVQLI
Sbjct: 194 EIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

[Close]

BLAST of CmoCh05G007340 vs. TAIR 10
Match: AT5G49940.2 (NIFU-like protein 2 )

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-34
Identity = 84/161 (52.17%), Postives = 106/161 (65.84%), Query Frame = 0


Query: 7   TRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTRRRHLGN 66
           T  QA+ P+ +++ L   P   +S   L          +    RFL       R + +  
Sbjct: 14  TPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSRQLFRRSKVVKA 73

Query: 67  VVSPSCVL--PLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSST 126
           V +P  +L  PLTEENVE VLDE+RP LM+DGGNVALHEIDG +V +KLQGACGSCPSST
Sbjct: 74  VATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSST 133

Query: 127 MTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKL 166
           MT+KMGIE RL +KIPEI+ VE + D ETGLELN +N+EK+
Sbjct: 134 MTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKV 174

[Close]

BLAST of CmoCh05G007340 vs. TAIR 10
Match: AT4G01940.1 (NFU domain protein 1 )

HSP 1 Score: 92.4 bits (228), Expect = 4.9e-19
Identity = 53/141 (37.59%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 76  LTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRL 135
           LT +NV+ VL++VRP L++DGGNV +  ++  VV LKLQGAC SCPSS+ T+ MGIE  L
Sbjct: 85  LTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVL 144

Query: 136 RDKIPEIL-EVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGILELIEIKDYVVKVR 195
           ++K  + L ++ Q+ D E   ++  + V   L  +RP +   GG + E++ ++     V+
Sbjct: 145 KEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRPAIKNYGGSV-EVLSVEGEDCVVK 204

Query: 196 LSGPAAGVMTVRVALTQKLRE 216
             GP +  M ++ A+ +K ++
Sbjct: 205 YVGPESIGMGIQAAIKEKFKD 223

[Close]

BLAST of CmoCh05G007340 vs. TAIR 10
Match: AT1G51390.1 (NFU domain protein 5 )

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-08
Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 88  VRPSLMADGGNVAL--HEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEV 147
           +RPS+  DGG++     + +  +V L++QGAC  CPSS++TLK GIE  L   + E+  V
Sbjct: 199 IRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGV 258

Query: 148 EQIIDTE 153
           EQ  D E
Sbjct: 259 EQEFDGE 265

The following BLAST results are available for this feature:

BLAST of CmoCh05G007340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84RQ7	3.0e-69	73.44	NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2...	[more]
Q93W20	9.5e-60	58.56	NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU2 PE=1...	[more]
Q84LK7	4.7e-51	68.63	NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=N...	[more]
Q93W77	6.9e-18	37.59	NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU1 PE=1...	[more]
P33179	1.1e-15	62.32	Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain L31) OX=29412 ...	[more]

BLAST of CmoCh05G007340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EP39	2.1e-118	100.00	nifU-like protein 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436107...	[more]
A0A6J1K7T6	1.0e-117	99.56	nifU-like protein 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492451 P...	[more]
A0A0A0LMF5	9.1e-106	90.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060370 PE=3 SV=1	[more]
A0A5D3BPX3	3.8e-104	90.31	NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G0...	[more]
A0A5A7U598	5.0e-104	89.87	NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484...	[more]

BLAST of CmoCh05G007340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929559.1	4.3e-118	100.00	nifU-like protein 3, chloroplastic [Cucurbita moschata] >KAG6598879.1 NifU-like ...	[more]
KAG7029821.1	1.6e-117	99.56	NifU-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022997561.1	2.2e-117	99.56	nifU-like protein 3, chloroplastic [Cucurbita maxima] >XP_023545672.1 nifU-like ...	[more]
XP_038889481.1	1.5e-107	92.51	nifU-like protein 3, chloroplastic [Benincasa hispida]	[more]
XP_004148324.1	1.9e-105	90.75	nifU-like protein 3, chloroplastic isoform X2 [Cucumis sativus] >KGN61156.1 hypo...	[more]

BLAST of CmoCh05G007340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25910.1	2.1e-70	73.44	NFU domain protein 3	[more]
AT5G49940.1	6.8e-61	58.56	NIFU-like protein 2	[more]
AT5G49940.2	1.1e-34	52.17	NIFU-like protein 2	[more]
AT4G01940.1	4.9e-19	37.59	NFU domain protein 1	[more]
AT1G51390.1	3.0e-08	43.28	NFU domain protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034904	Fe-S cluster assembly domain superfamily	GENE3D	3.30.300.130		coord: 156..227 e-value: 2.8E-21 score: 77.4
IPR034904	Fe-S cluster assembly domain superfamily	GENE3D	3.30.300.130		coord: 73..155 e-value: 3.5E-32 score: 112.3
IPR034904	Fe-S cluster assembly domain superfamily	SUPERFAMILY	117916	Fe-S cluster assembly (FSCA) domain-like	coord: 156..226
IPR034904	Fe-S cluster assembly domain superfamily	SUPERFAMILY	117916	Fe-S cluster assembly (FSCA) domain-like	coord: 78..152
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PFAM	PF01106	NifU	coord: 162..224 e-value: 4.0E-12 score: 46.1 coord: 81..146 e-value: 1.9E-26 score: 92.0
None	No IPR available	PANTHER	PTHR11178:SF25	NIFU-LIKE PROTEIN 3, CHLOROPLASTIC	coord: 16..227
None	No IPR available	PANTHER	PTHR11178	IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED	coord: 16..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G007340.1	CmoCh05G007340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0097428	protein maturation by iron-sulfur cluster transfer
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding