CmoCh05G007320 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATGGCTGAATCAGCTACTCAATTTGCGTGGGGCAATGCTCTAAAGAAGAAGCTTCTTCAAACAAAAGTTGCCAATGGTTTTGATTTCTCTCTCCAAACACTGAAATTTTCTCGAGAAAATTTAGAAAGAGAAGAAGAAGAGGAAGAGAAGATGGAAAATGGGTTGAAAAGGCTGAGGAAGATCATACCAGGCGGCGGCGGCGGTGGTGGTTTTAATGGAGGTTTGGAAGAGGAAGAATTGTTGAAACAAACTGAAAGTTACATAAAATGTCTTGAGTTGCAGGTGAATGTTCTTAGATGTTTGGTTGAAACAAACACAATTTGA ATGGCAATGGCTGAATCAGCTACTCAATTTGCGTGGGGCAATGCTCTAAAGAAGAAGCTTCTTCAAACAAAAGTTGCCAATGGTTTTGATTTCTCTCTCCAAACACTGAAATTTTCTCGAGAAAATTTAGAAAGAGAAGAAGAAGAGGAAGAGAAGATGGAAAATGGGTTGAAAAGGCTGAGGAAGATCATACCAGGCGGCGGCGGCGGTGGTGGTTTTAATGGAGGTTTGGAAGAGGAAGAATTGTTGAAACAAACTGAAAGTTACATAAAATGTCTTGAGTTGCAGGTGAATGTTCTTAGATGTTTGGTTGAAACAAACACAATTTGA ATGGCAATGGCTGAATCAGCTACTCAATTTGCGTGGGGCAATGCTCTAAAGAAGAAGCTTCTTCAAACAAAAGTTGCCAATGGTTTTGATTTCTCTCTCCAAACACTGAAATTTTCTCGAGAAAATTTAGAAAGAGAAGAAGAAGAGGAAGAGAAGATGGAAAATGGGTTGAAAAGGCTGAGGAAGATCATACCAGGCGGCGGCGGCGGTGGTGGTTTTAATGGAGGTTTGGAAGAGGAAGAATTGTTGAAACAAACTGAAAGTTACATAAAATGTCTTGAGTTGCAGGTGAATGTTCTTAGATGTTTGGTTGAAACAAACACAATTTGA MAMAESATQFAWGNALKKKLLQTKVANGFDFSLQTLKFSRENLEREEEEEEKMENGLKRLRKIIPGGGGGGGFNGGLEEEELLKQTESYIKCLELQVNVLRCLVETNTI Homology
BLAST of CmoCh05G007320 vs. ExPASy Swiss-Prot
Match: Q9SKX1 (Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 8.5e-06 Identity = 35/107 (32.71%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of CmoCh05G007320 vs. ExPASy Swiss-Prot
Match: Q9SUM5 (Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 9.4e-05 Identity = 35/109 (32.11%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of CmoCh05G007320 vs. ExPASy TrEMBL
Match: A0A6J1EPJ9 (transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111436209 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 2.4e-51 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of CmoCh05G007320 vs. ExPASy TrEMBL
Match: A0A6J1K5R7 (transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111491923 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.7e-49 Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 0
BLAST of CmoCh05G007320 vs. ExPASy TrEMBL
Match: A0A6J1FJ33 (transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.3e-30 Identity = 80/119 (67.23%), Postives = 93/119 (78.15%), Query Frame = 0
BLAST of CmoCh05G007320 vs. ExPASy TrEMBL
Match: A0A6J1DIU0 (transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.3e-30 Identity = 79/115 (68.70%), Postives = 92/115 (80.00%), Query Frame = 0
BLAST of CmoCh05G007320 vs. ExPASy TrEMBL
Match: A0A6J1I0E6 (transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.3e-29 Identity = 80/122 (65.57%), Postives = 93/122 (76.23%), Query Frame = 0
BLAST of CmoCh05G007320 vs. NCBI nr
Match: XP_022929709.1 (transcription factor bHLH146-like [Cucurbita moschata]) HSP 1 Score: 211.1 bits (536), Expect = 4.9e-51 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of CmoCh05G007320 vs. NCBI nr
Match: KAG6598877.1 (Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 208.8 bits (530), Expect = 2.4e-50 Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of CmoCh05G007320 vs. NCBI nr
Match: KAG7029819.1 (Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 205.7 bits (522), Expect = 2.1e-49 Identity = 109/112 (97.32%), Postives = 109/112 (97.32%), Query Frame = 0
BLAST of CmoCh05G007320 vs. NCBI nr
Match: XP_022996791.1 (transcription factor bHLH146-like [Cucurbita maxima]) HSP 1 Score: 204.9 bits (520), Expect = 3.5e-49 Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 0
BLAST of CmoCh05G007320 vs. NCBI nr
Match: XP_023545673.1 (transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 201.4 bits (511), Expect = 3.9e-48 Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of CmoCh05G007320 vs. TAIR 10
Match: AT2G18969.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT4G30180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09 Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 0
BLAST of CmoCh05G007320 vs. TAIR 10
Match: AT2G43060.1 (ILI1 binding bHLH 1 ) HSP 1 Score: 51.2 bits (121), Expect = 6.0e-07 Identity = 35/107 (32.71%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of CmoCh05G007320 vs. TAIR 10
Match: AT4G30180.1 (sequence-specific DNA binding transcription factors;transcription regulators ) HSP 1 Score: 47.8 bits (112), Expect = 6.7e-06 Identity = 35/109 (32.11%), Postives = 55/109 (50.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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