CmoCh05G007100 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATTTTGTTTACTCGAATGTTTTCTTCGCTCTTTGGAAATAAGGAAGCTCGAATCCTTGTTCTTGGGCTCGATAATGCCGGGAAAACTACAATTCTCTGTACGTTTTTTTTTAATTATCTTTTCTGCTTACATTTTGTGATGTGTTGGGTTTTTGTGATATCTGGATGGAGACTTGGCGCCATTTTGTGATGGATTCTTTTCAAAATTGTGCAGATCGGCTCCAGATGGGGGAGGTTGTCTCGACAATTCCAAGTTGGTTTTCTTTCCAAATGTGATCTTGTGGTTCTCTTTGTAATTATAATTTGATATGTGGGATACAAAGCATTTCCCTAATTAAGGTTATGAGAATTAAAATTTGAATTTTCGGCATTCAAGTTTAAGAGATTGGGTGGAGTTGCCACGATAGTTGCTGCATTAGTTTTGTAGATCATTTAATACTGTTTGGATTAGAAACAATGGTTGCCTCCTTCATTCTCTTTGGAGATTTCTGTAGTTCGAATTTTTTGTTTTCCCCATACTTTTTGTGTTCTTCTTTCTGTGGGCTCTCCATCCCATTTGGAGAAGGACAATGATCGGAAATTACATCTTGAATGATAAAATTCAACCACAAGAAGCATAGGCATCTACTTTTTTTTTTTCAATTGTTTAATTGTAAATACTGAGAAGTTGATTGGAAACAACTATGGGCAGGCCATAGATCTAGATTCCTTAAAATGATGAATTCAAACTATAGTAGTTTTGTTGTGAATTTACCATGAGAATTTTCTTTGAATGAGTTGTTTTACGTGGAAATATCAAACTAGGTTCTGCATAATCGTTTGCTTTAGATTTGTTAGTTTGTAGGTTTATATGCTGTTCCTTTTTTTTTTTTTCCTTCTGTTACTAATTTTTGAGTGGTTTCACTTATAGAGTTTTGTAAATTTTGTGGGGTATTTTTCTTTGTGTACCCACAAAGTTCTTTGATGTTCCCAATACCTTCTTGTTACACTATATTTCATATTTCTTAGTGGAAGTTTCATAAGTGAAAAGCTGAATTGAAAACAATTGTTTCTTGCATCGACTTTCCTTCAGCTATTGTTCAAATATCGTATAAACTATATCCATTTTGTATGCAGCAATTGGGTTTAATGTTGAAACTGTGCAGTACAACAACATCAAATTCCAGGTCTGGGATCTTGGTAAGCCAATCTAGGCCCTGATAGAAAGAAATGTGATCTCATGTTGTATTATTTTCTCCATGATTACTCTTATGAGATTGCAACACACTCAGAGAGAGAGAGAGAGAGAGAGAGGCATGCATTGTTCTGCTAAATTGATAAATAGGTTATGCAGGTTTATGTTTCTTATAAAAACAAAAAACAAAAAACAAAGAAAGATTGTGCAAATTTGTAATGATTTTATTCTAAATTCTACATACATGCGATTCAGCATGAAAATTAATTTCATATTAATAACATTAATGTTATAAAGCATTTGATAATACTAATTTCTTTAATAAAAAGAATTGTTATAGGAACCATTTTCATTGGGGGGACGGGTGGGGGGGATTATTCTAGCCATATGTGTGTTTGATTGCATGTCTGTGCTTTTTTACTATGACAATCTTATCGACTTGGGGCAAGTATTAGCTTCGATTATTTTGTCAAATCCATCCAAGCATCTTGGTTATGTTATTAATAGCTTTTCGTTGTCTGTAATGCAGGAGGACAGACTAGTATCAGGTTAGTCTTGTCCTTTTATCAGTTTTTGGATATTTTCCTCAAAAGTTGAAATTTGATATGTTTTCTAGTTTTTCTTTCCAATGCTTGGTTAAAATCTCTAGCTTGTAGAAACCATATCTGGTAATATTAGGAAAGACAGTGTCGAATATAATCTGTTCAACAAAAAAGAAAGTTGTTTAAGCAGGTAAAGGCATGTAGGTGGTTGTATATTGAAATTAATGATATTGCATAACATATGCAAACTTGGAAGGTTGTAAGAGTAGAAATTCATCTCAGGTTGTCATTTTTGTTTTTTGGTTCTCTCTCTCTCTCTCTCTCGTCCTTAATGGATAATAGCTTATAATTTTGTTATTTATTATCAAATGTTCATGATGGTTTTTTCGCCTAATTTTTATTAATAACGTATGAAAAAAAAAAAAAAAAAAACTCTATAGTTTACTAGAATTGTTAAGACACTCTTAAATTTGGATAGCCAGCTCTCTCTTGTCTGTGAATTTCTTTGTCCTGCACCCCTGAATGAGATACGATGCTCTTTTTTAATTTTCTCCCCCAAATATTTAAGCTGGTGCTCCCCCTGGCTCCCGCATCCATTTCCCAGATTGATGGTTTTCTCAGCTGGGAGGAGAGTACCATATATATATATATATATATATATATATATATATATATATATATATTTAATCAAAAGATAGGATAGGAGGATACTTTTCTTTTATTTTTTTCTTCATCATTTTTCCTTCTAAATGAAGACTTATTATGTTTCAACTGATAATTATGATAATGTAATTTAATAATCGTTCCAATAGTGCTTTTCAAGAAGCTATTTGATTGCACACTTACAGTAATACCAAATTCTGATTGAAAGAGCACGAATTTGAACTTTATTTGGTTCTTAGGAAATAGGAACGTGTGCTTTACATGATTACTGTTGTACGGTTATCACATTCTGTGGAAGCTTGTCTCTGTGTCTGGTCTAAATTGAGATCCATGTCTGGTTTTTCCTTTAATGTCTTTATTTTTGGAAATACTCTTGAATTTAAATTTCTTATTCACCCTTCTGTTCTTTTGATAATGAAAATATTCCATCTATTCTTTACCCAAACTAACTTATGTCACAGAGTTTCCTTCCGCAGATAGTAGTCTTGGGTTATTCCAGAAAGAAACAGGAAGTGGATACTTGACCTTGTTCATTTGAGCCTGTATCAGACTTCATAAATAGACTCTCTCATGTCATGTGTCAACAATACATTGTTTTTGAAGTTGACTAATATGTGTATTTGTGACTTGATGCATACTTCAGCCCATCTATATTCTACCTGTTTATTTACTATAATTGGCTCCTTAAACTTTTCTTTCTCCTTCATTTTTCTTTTCTCCTCTTTTTAAATTGTTCAAGCTAATTAGTTGCTTGCCTTGTGTCGTAGACCATACTGGAGATGCTATTTTCCAAATACGCAAGCTATAATCTACGTGGTTGATTCAAGTGATACTGATAGGCTGGTGGTAGCAAAAGAGGAGTTTCATGCAATACTTGAGGTACAATATGGTCGGCACTTGTTACAGAGTTGGTAAACAAAATGTAGAATTTGTCATACCTGACCTTGTGTGTTTCTGAAATTTGGAAATAAAGTCTAATGATTAGTTATATTGTCAAATTATGCATTTTAGTATATAAGGTTTATGGTTTTATTTGATGCTGAGTAAAATCTCAATTCTGCGTTAATGAAATACATCATCAAGAGCGTGGATTGTATCTGGTTCCTAGATGGCAATACTCAGTAGTAGTATGTTTGCGTCACTATACTTTTCCTTCAGTTTCAAAAGTCCTTCTGCAAGAAATAAATTGAACGTGTCTGAACTGTCCACATTTTTTTTAGGAAGTATTGAGCTTGTAATAGTTTTGTAAGTTTGTTTATTAGTCAAGTTTACTGTTTTCAATTTTCAGTCGATTTTTGTCAGCCAGTTCCAATAGTTTTTCTTCTGTGTGTTTGTTCAGGAAGAAGAGTTGCGTGGTGCAGTTGCGTTAGTTTTTGCGAATAAGCAGGTTAGTGCTGTTGCCGATTATTTATATTGTTAGCATTTTTGGTCAGAAAATAGAATCCAATAGACTTTGAATCTGATAGTTGAAGTACGCATATGCAATTGGGCTTAAATAGTAGGATTTAAGGATTTGTTTGTATGTGTTTTGGAAAGTACGCAAAAAATATCATTTTATCTTTTTTGTTTTAGAAAAACCGTTCGGAACTATTTTTCTTTCTAGTGTTTATTTACCTTTTATTTTATTTATTCAAATACATTATTTAGTTTCGTTTTGAGTTCATCAATATGGAGTGTGATGTGATGGATTTGAACCTTTGACCTTTTAGTTGAGAATACACATGTTTTTTTTTTTTGTCAGCTGAGCTACGTTCATGTTGATACATTATTAAGTTTAGCAACTACGAAATGTGAAATTGAATCGTATGTGGAGAGTTATTGTAACAAATACTGGAAACAGTAATTCTTAGTTTTTTCAGAAAATAATTGAAAACATTAAAACCTTATCTCTCATTTTATCATTTCCCCGATAAATTTCTCAACTCAAGTTTTGTGAGTTTGAAAACTGTGTAGCTGTTTCTCAAAACAACGGAAGGTCCAAGACCAAGCATTTGTGATTGTGTGTCTGAGGTGTTTTGAAGGCTTGTATAAAATGTTTAGTACAAATGGTTAATGCAGTTTCTATTTTTCTATCTTTTCTACATATTATCTTTCCCATCGGTATAGGATCTTCCGGGTGCACTTGATGATGCTGCAGTCACAGAGGCTTTAGAGTTGCACGAGATTAAGAACCGCCAATGGGCTATATTTAAAGCCTCCGCTATAAAAGGAGAAGGTCTTTTTGAGGGATTGGATTGGTAAGTACAAAGTTATACTTTACATCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTTTTTTAATGATTCCAGAAACTTTAATAATTAGACCCTCCCCGACCGCCTAAATGCATTGTTTTGTTCGACATAGTCGACCCAATCTTGTGAATTTATTTTTGGATACCTTTGTTCGATATCGAATGCTAGGAGCAGCATTGTCAGTCAGAGCTACGTTCTTAAACGATTTCACTTTTTTTACAGCCTTCTTTTATTTAGTTTAACCGGTTAATGTGCTAATTCAGGTTAAGTAACACCCTCAAGTCTGGAGGTGGCTAAGTATTAGCAGCCAAAGAAGAACATGTGAGGCACCCAGTTGGAGAATACGATGTTTGAGCATCATGACTTGCAGAAGAGAACTCATTTGCCGAGTGATTTCGCCAGTTTTACTTGTTTTAGTCACAATTTTTCTTTTTAAAGGGAATGATCTATTTTGTATACATGTAAAATTGCTTTCATTAAAGAGGCTTTTTCTTGTTTCCCATCTTTAATTGCTTGCTGTGATTTGAATGCTATTTGTTAACATCATTTCTAATTCAGGGATAATGTCTAAGATTGAACTTTTGTC ATGGGGATTTTGTTTACTCGAATGTTTTCTTCGCTCTTTGGAAATAAGGAAGCTCGAATCCTTGTTCTTGGGCTCGATAATGCCGGGAAAACTACAATTCTCTATCGGCTCCAGATGGGGGAGGTTGTCTCGACAATTCCAACAATTGGGTTTAATGTTGAAACTGTGCAGTACAACAACATCAAATTCCAGGTCTGGGATCTTGGAGGACAGACTAGTATCAGACCATACTGGAGATGCTATTTTCCAAATACGCAAGCTATAATCTACGTGGTTGATTCAAGTGATACTGATAGGCTGGTGGTAGCAAAAGAGGAGTTTCATGCAATACTTGAGGAAGAAGAGTTGCGTGGTGCAGTTGCGTTAGTTTTTGCGAATAAGCAGGATCTTCCGGGTGCACTTGATGATGCTGCAGTCACAGAGGCTTTAGAGTTGCACGAGATTAAGAACCGCCAATGGGCTATATTTAAAGCCTCCGCTATAAAAGGAGAAGGTCTTTTTGAGGGATTGGATTGGTTAAGTAACACCCTCAAGTCTGGAGGTGGCTAAGTATTAGCAGCCAAAGAAGAACATGTGAGGCACCCAGTTGGAGAATACGATGTTTGAGCATCATGACTTGCAGAAGAGAACTCATTTGCCGAGTGATTTCGCCAGTTTTACTTGTTTTAGTCACAATTTTTCTTTTTAAAGGGAATGATCTATTTTGTATACATGTAAAATTGCTTTCATTAAAGAGGCTTTTTCTTGTTTCCCATCTTTAATTGCTTGCTGTGATTTGAATGCTATTTGTTAACATCATTTCTAATTCAGGGATAATGTCTAAGATTGAACTTTTGTC ATGGGGATTTTGTTTACTCGAATGTTTTCTTCGCTCTTTGGAAATAAGGAAGCTCGAATCCTTGTTCTTGGGCTCGATAATGCCGGGAAAACTACAATTCTCTATCGGCTCCAGATGGGGGAGGTTGTCTCGACAATTCCAACAATTGGGTTTAATGTTGAAACTGTGCAGTACAACAACATCAAATTCCAGGTCTGGGATCTTGGAGGACAGACTAGTATCAGACCATACTGGAGATGCTATTTTCCAAATACGCAAGCTATAATCTACGTGGTTGATTCAAGTGATACTGATAGGCTGGTGGTAGCAAAAGAGGAGTTTCATGCAATACTTGAGGAAGAAGAGTTGCGTGGTGCAGTTGCGTTAGTTTTTGCGAATAAGCAGGATCTTCCGGGTGCACTTGATGATGCTGCAGTCACAGAGGCTTTAGAGTTGCACGAGATTAAGAACCGCCAATGGGCTATATTTAAAGCCTCCGCTATAAAAGGAGAAGGTCTTTTTGAGGGATTGGATTGGTTAAGTAACACCCTCAAGTCTGGAGGTGGCTAA MGILFTRMFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVVAKEEFHAILEEEELRGAVALVFANKQDLPGALDDAAVTEALELHEIKNRQWAIFKASAIKGEGLFEGLDWLSNTLKSGGG Homology
BLAST of CmoCh05G007100 vs. ExPASy Swiss-Prot
Match: Q96361 (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARF1 PE=2 SV=3) HSP 1 Score: 348.6 bits (893), Expect = 4.3e-95 Identity = 169/182 (92.86%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of CmoCh05G007100 vs. ExPASy Swiss-Prot
Match: P40940 (ADP-ribosylation factor 3 OS=Arabidopsis thaliana OX=3702 GN=ARF3 PE=1 SV=2) HSP 1 Score: 347.4 bits (890), Expect = 9.6e-95 Identity = 168/182 (92.31%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of CmoCh05G007100 vs. ExPASy Swiss-Prot
Match: P61211 (ADP-ribosylation factor-like protein 1 OS=Mus musculus OX=10090 GN=Arl1 PE=1 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 1.0e-64 Identity = 119/179 (66.48%), Postives = 143/179 (79.89%), Query Frame = 0
BLAST of CmoCh05G007100 vs. ExPASy Swiss-Prot
Match: P61212 (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=1 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 1.0e-64 Identity = 119/179 (66.48%), Postives = 143/179 (79.89%), Query Frame = 0
BLAST of CmoCh05G007100 vs. ExPASy Swiss-Prot
Match: P40616 (ADP-ribosylation factor-like protein 1 OS=Homo sapiens OX=9606 GN=ARL1 PE=1 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.8e-64 Identity = 118/179 (65.92%), Postives = 143/179 (79.89%), Query Frame = 0
BLAST of CmoCh05G007100 vs. ExPASy TrEMBL
Match: A0A6J1EP05 (ADP-ribosylation factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436238 PE=3 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 7.3e-98 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of CmoCh05G007100 vs. ExPASy TrEMBL
Match: A0A6J1KDZ9 (ADP-ribosylation factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492376 PE=3 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97 Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of CmoCh05G007100 vs. ExPASy TrEMBL
Match: A0A0A0LH74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049970 PE=3 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 4.8e-97 Identity = 180/182 (98.90%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of CmoCh05G007100 vs. ExPASy TrEMBL
Match: A0A6J1DIL7 (ADP-ribosylation factor 1 OS=Momordica charantia OX=3673 GN=LOC111020854 PE=3 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 4.8e-97 Identity = 180/182 (98.90%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of CmoCh05G007100 vs. ExPASy TrEMBL
Match: A0A1S3BT35 (ADP-ribosylation factor 1 OS=Cucumis melo OX=3656 GN=LOC103493197 PE=3 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 4.8e-97 Identity = 180/182 (98.90%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of CmoCh05G007100 vs. NCBI nr
Match: XP_022929741.1 (ADP-ribosylation factor 1-like [Cucurbita moschata] >XP_022929742.1 ADP-ribosylation factor 1-like [Cucurbita moschata] >XP_022929743.1 ADP-ribosylation factor 1-like [Cucurbita moschata]) HSP 1 Score: 366.3 bits (939), Expect = 1.5e-97 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of CmoCh05G007100 vs. NCBI nr
Match: XP_022997467.1 (ADP-ribosylation factor 1-like [Cucurbita maxima] >XP_022997468.1 ADP-ribosylation factor 1-like [Cucurbita maxima] >XP_022997469.1 ADP-ribosylation factor 1-like [Cucurbita maxima] >KAG6598858.1 ADP-ribosylation factor 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 364.8 bits (935), Expect = 4.4e-97 Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of CmoCh05G007100 vs. NCBI nr
Match: XP_022153337.1 (ADP-ribosylation factor 1 [Momordica charantia]) HSP 1 Score: 363.6 bits (932), Expect = 9.8e-97 Identity = 180/182 (98.90%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of CmoCh05G007100 vs. NCBI nr
Match: XP_004149069.1 (ADP-ribosylation factor 1 [Cucumis sativus] >XP_008452088.1 PREDICTED: ADP-ribosylation factor 1 [Cucumis melo] >XP_038890939.1 ADP-ribosylation factor 1 [Benincasa hispida] >XP_038890940.1 ADP-ribosylation factor 1 [Benincasa hispida] >XP_038890941.1 ADP-ribosylation factor 1 [Benincasa hispida] >KGN61108.1 hypothetical protein Csa_021187 [Cucumis sativus]) HSP 1 Score: 363.6 bits (932), Expect = 9.8e-97 Identity = 180/182 (98.90%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of CmoCh05G007100 vs. NCBI nr
Match: XP_022937826.1 (ADP-ribosylation factor 1 [Cucurbita moschata] >XP_022965973.1 ADP-ribosylation factor 1-like [Cucurbita maxima] >XP_023538132.1 ADP-ribosylation factor 1 [Cucurbita pepo subsp. pepo] >KAG6586202.1 ADP-ribosylation factor 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 363.2 bits (931), Expect = 1.3e-96 Identity = 179/182 (98.35%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of CmoCh05G007100 vs. TAIR 10
Match: AT2G24765.1 (ADP-ribosylation factor 3 ) HSP 1 Score: 347.4 bits (890), Expect = 6.8e-96 Identity = 168/182 (92.31%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of CmoCh05G007100 vs. TAIR 10
Match: AT2G24765.2 (ADP-ribosylation factor 3 ) HSP 1 Score: 248.8 bits (634), Expect = 3.3e-66 Identity = 120/128 (93.75%), Postives = 126/128 (98.44%), Query Frame = 0
BLAST of CmoCh05G007100 vs. TAIR 10
Match: AT5G14670.1 (ADP-ribosylation factor A1B ) HSP 1 Score: 239.2 bits (609), Expect = 2.6e-63 Identity = 111/177 (62.71%), Postives = 139/177 (78.53%), Query Frame = 0
BLAST of CmoCh05G007100 vs. TAIR 10
Match: AT1G10630.1 (ADP-ribosylation factor A1F ) HSP 1 Score: 238.8 bits (608), Expect = 3.4e-63 Identity = 111/179 (62.01%), Postives = 139/179 (77.65%), Query Frame = 0
BLAST of CmoCh05G007100 vs. TAIR 10
Match: AT2G47170.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 238.0 bits (606), Expect = 5.8e-63 Identity = 111/179 (62.01%), Postives = 139/179 (77.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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