CmoCh05G005610 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G005610
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	GATA transcription factor
Location	Cmo_Chr05: 2750666 .. 2759563 (-)
RNA-Seq Expression	CmoCh05G005610
Synteny	CmoCh05G005610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTGCAAATCCTCAGCCTTTGCAAGCGCGTCCCTTCCAGGAACATGTCCAAGTTCCTACAATGATGGGGAATGACGACGGTGAATATGAAGATGATGGTGGCGGCGGCGGCGGCGGAGATGTTATGGATGATGTCGAAGGGGCTCATATGACTTCGGTGAGCGTAGTGAAGCATGGTGGGTTGGTCATGGCGTCTAGAACTAGTGAGCTTACGCTTTCTTTTGAGGGCGAGGTTTATGTGTTCCCCGCAGTTACTCCCGAAAAGGTACCTCTTCGCCTGTTGTCTGGCAGTTTTGTTATGAGTATATGCTCTTGTTCTCGTAGTTATGCTTAATTTGAACAAGCTGGAGTTGCTGAGACTCTCATGAACCTAAACCAGTGTCTTTATGCTACTCTGAGTGCCTGCGAAACGGAGAGACAGACTTTGGGAAGACATCCTTAATTAATTTTGTTCAAACTGTTAGATTATTCGTATTTTTTCAATGAGTATGTCGTACATTCATGTGCAGATCTCATAATTTAGTTTCCGTCTCTTTTCCTGTTTATGTCCTGTTTTTTTTTTCTATCATTGAGTTGTAGTATGAAATTCTGTTGTCGGACGCTATTCATAGAGCTTTATGCTGTGGCATTTGGATATTTTTCATATTCATTCCCAATTTCTTGGGGGCAACCTCTCGTGTTTCATTGGACTATTCAATGGAAGGAAAACATGCACATCTGGTGACCACCCACATAATTGTGGGCTGCCTTCACGATCACATGGTCAACACCTATTACACCCGGGAATCCGATGACTACCATACCATTGTCAATTAGACAACCATGTCTATTTCCTCTCATTGAAATTTGGGATGATTGATTTTGTTCTCTTGTCTTACTTGAGTATGTTTGATGTGAAGTCCTACATCGGTTGGGGAGGAGAACAAAATATTATTTATAAAGGTGTGGAGACCTCTCCCTAGCAGACGCGTTTTAAAAACTTTAAGGAAAATCCCGAAAGAGAAAGCCCAAAGAGAACAATATCTGCTAGCGGGTGGGCTTGGGTCGTTACAAATGGTATCAGAGTTAGACATCAGGCGATGTGCCAGCGAGGAGGTTGAGCCTCGAAGGGGGGTGGATGCGAGGCGGTGTGCCAGCAAAGACGCTGGACCCGAAGGGGGATGGATTGTGAAGTCCCACATCGGTTGGGGAGGAGAGCAAAACATTCTTTATAAGGGCGTGGAAACCTCTCCCTAGCATACACGTTTTAAAAGCTACCTTTATCAATTTGGTTTAGATAAGGAAATGGCTACCTTTTTTTTGCACCAGACGGGACACCTATGATACACGAGAGTTCTGAATCTTTATAGTTATTTCAATTCGTTTTAGATTTGATATCATTGACAGGGCCGACAGATTGGCCCTGTCTAAACAATGAGATGAAGTAAGAGCTAGACACAGTTAGCTAGAAATAGGTTCTGTTAGAAACATGAAAGAAATAATGGTAATGAAGTCGAAACTTTCTGCTGTTCCATTGAAAGAATAGTTTGAGCATGTGGTACATGGTGGTGAATTGACATCTTCTTGTTCACTAGGTTTTTTTTCTAAAGCTTACATATTATGGCTGCATCTTCTTGTTCATTAATCTTGAAATCCATTATAGTTTGGAGTCTGCTTTCTTTGGAAGAATTACCTGGTTTTGATGACAGGTACAAGCTGTGCTCTTACTTCTTGGAGGACGTGATGTACCAACCGGTGTGCCTACAATGGAAGTACCATACGATGATAACAACAGGGTAATGCAAATCATGGAAATTTAGACTCCATATTATGTGGTTATGTTCATATATTAGATCTTTCCTGTCATCTTCAGGGTATGTTTGACACCCCAAAGCGCTCCAACTTATCACGGAGAATTGCCTCCCTGGTTCGGTTTCGTGAAAAGCGGAAGGAGAGATGTTTTGACAAGAAAATTAGGTACACCGTACGGAAAGAGGTTGCACAGAGGTATGATGACTTAGGCTATAGCTTATCGACGTTATATTTTTATCCTGGATTTTGTTCTGCTTCTCTTAGAATTTTCTCTCATCGAACAAAACTTGATAATCATGAAGTAATTTTCCTATAGTACACGTCTAGGCCAAACTTGATAATTTATGAATTATGGACGTTTAATTATAATGTTCATTTTTGTTGGATTTCCTTGTACTTTTATAATATTAAATGTGTATAATGTATATATTTGCTATTTATTTCTGTAATATATATATTTTTGTTGGATCTATATTTTTATTCTCTTTCCAAAATGGTCTCTTCGCGTTCGTCATCACCGTCGGAACCCTACCCGTCATCCTAAAACAACAACTCTATTGTCGACGATATCTTCACGTCTAGAGTTCCTGTTCGTCCGTTGATCACATGACTAGTTCATCTTTTGTAGTATCCGTTCTCCTTTCTATTCATGAACAATGCTTTGGTATTGTAGGTTAGGACATCCCAGTGTTCTCTATCTTGATGGCACTTTGTTTCATTGGGAAAGTTGCATTTTTGCAAAAAAAAAAAACCCATCAAGTCACATACTTACCAAAGCCTTACATAGCCTCGAACCATTTTACTTAATCCATAGTGATGTTTGGGTCCTGTTAAAATTTTGACTCCTAGTGGTAAAAAGTTGATTGTGACTTTTATTGACGGTCACACATGTCTATCTTGGGTCTACTTAATGACAATTACATATGAGGTGAAATCTTTTCAATATTTTTATGATACGATTGAAACTCAATTTCAGACCAAAAGCAACATTTTACACTTAGACGATGTAAATTAGTATTTCAATGCATATTTGAGTGATTTTATAAAAGATAAAGGTACCTATTTAATAAATAGGATGCCTAGTAATTCTTGAATTTTGTAGTCCATCTTGAATGTCTTAAACCTATTTTTCCAACTTGTCGTATATATTCTGATTTACCCATAAGTTTTTTTTTGTTGTGTTGTGTCATGATTGTACATTTTCAACCGTACTGCGTCCTGTCTTAACATGCTCACGACAAGCTTTAAGGGAAATCCAAGCCTCATATACACTTTTTGCCCGTCTTTGTGGATTCGTTGAACCTTATACGAAGTTTGTCTTCATCCAACCAAACATAACTTGTGCGGAATCCAAGCTTGTTCGGTCACACACATCGCCTGTCTTGACATGCTCACGACAATCCTTAAGAGGAATCCAAACCCCATATACATTTTTTGTCCGTCTTTGTGGCTTCGTTGAACTTTAGACAAGGTTTGTTTTCACCCAACCAAACATAACTTGCGCGGAATCCAAGCTTGTTGGGTCACACATGTCGCCTGTATGTGCACGTCCTGTCTTGACATGCTCACGACAAGCCTTAAGAGAAATCCAAGCCCCATATACATTTTTTGCCCGTCTTTGTGGCTTCGTTGAACTTTAGACAAGGTTTGTCTTCACCCAACCAAACATAACTTGTGTGGAATCCAAGCTTGTTCGGTCACACACGTCGCTTGTGTGCATGTTCAATCTTCTGCGACTCAACTAACTTACCTTTACACTAGGTTGCATGAAACGTGACCATTTTAAAGTTATATTATATACTGATGTAGATTGGGCTGGAAGTACAATTGATAGAAGATCTGCCTCTAGGTAGTCGGAGGAAATTTAGTTAATGGCATGGTAGAAAATAAAATGTAGTAGTGAGTAGTGTTGAAGTCGAATTTAGAGTTTTTACCCATGAAATTAGGTATATGGGTTAGCAGGATAATTGAAGAATTTGAAAGTGTCTCAAAAGACACCTGGACAAGTCTATTTTAATAACAAGGGCATTGCTTTAACTTATAATTTGGCTCTATTTGATAGGATAAAACATATTGAAGTTGACATGCATTTCAAAAAGAAGAAGATTGATGCAGGTGTAATAATATGTATATTTATCTTCCAACGAAAAAACAAACAACTGGTATGCTAACTAAAGATCTTTCAAAAGGACAGTTTGATAAACTTCTCAACAAGCTGGCTATGGAAGTCCTCTACAGACCAACTTGAAGGGGAATGTTGGATTTCCTTTGTATCTTTGTAATATTAGATGTGTATTAGGTATGTATTTACCATTTATATTTGTATGATTCTTTTTCTCATTGGTACTTAAGAAGTCCTTGTATTTGTTTCATGATATAGAAGAAATACAATATTTTTATTCTCGTTTCAAAATTCAACTATTTTTCATTGTTGTTCTAGGATGCACCGTAAGAATGGCCAGTTTGCATCCTTAAAAGAAGGTTCAGGTGCTTCAAGTTGGGAGTCAGCACATAGTTGCCTCCAAGATGGTAGTCGTTCTGAAACTGTGTGAGTTCATGATTCTAATCTGTCCCTTTTCAACAATTTATTGTTTGGATATCTTTTATTAATGCTGTTATTATACCTCTATCAATATCTTTTTTTTTCTTCTAAAATATTTCAGTTTGCGGAAATGTCAACATTGTGGCGTTAGCGAGAACAATACACCTGCAATGCGTCGTGGGCCTGCTGGACCTAGGACTTTATGCAATGCATGTGGTCTGATGTGGGCAAACAAGGTTTGTATGCTAAGAAATAGTGTTATAAATTTCTAACTTAAGATGCACTCATACATCTTGAATACCTTTTCCTTTCCTTTCCTTTTACTGTTATATAGAATGAGATGTTAGAAAATGGAGAAGACTGTGCGCCAAGGAAGTTACAAATGTCTTTCAATTAGTGCATTAGAGATGTTGCTGTAATTACCAAAAGGTTTATAGTGTTTACACTGAGAATCAATGAAATAAAATAGATTCTGAAAATCAAACTCTTGGTTCTTTGGCCGGTGTGGGCTCTCTGGGGACACTAGGAACTTCAACGAGCAAGGTTTCGGAAATTGGTTTGTGCAACATGTATTTAAGTTTCTTCAAAAGAATTCAAAAGTTAGATTGCCAGGCACAAGGACGAAGGAAAAAAATGATTGGTTCTGTGTTCCTCCATAAGACTTGCCAAAGTGGCACCGGTTTGGGGATGGACATATATCTCGAGTGTTAATGCTTCCCGAAAAGAGTTCCTTCAAGAACCCTTAACCTATCCAGTTATCTTCCTTTCCAACCAACCTGACAGAGATGAAAATCAATGATAATATATCACTCTTTTGTGATATCTAGGAAAAAATTTATCGGTAAAAGAGCTGCTTTCAGATGCCCATATTCATTAATACATTATTTCTTCATGCAGTATTTGTTGGTATTTCTCTTCTGCAACATTTTCTTTAGCATTATTCCTTTTTTTTACCAGCATTATTCGTTTTACAGGGCACGTTGAGAGATCTCAGCAAGGGAGGGAGAAATGTATCTCTGGATCATATGGAACCTGTATGTCATATAAAAGAAAGCATTGTTTTTTTTTTCATTTTGAAAATGTCTTGTCTCATTGCCTAAGGTTTACTGTACTTGAATTGGGAGATAACAAAAAGTTCTCAAATCTATCATATTAGGGGAAAAAAAGAAAAGAAAGGAAAAAGCAAAAGGTAAATGGGAATCCCTTTGGTGGACACTTGGAGAGACTTGATTTCCTTCAAACATTGGCCATATTCCAACTGAAGTAAAGAGTCATTTGTGCAAGAGGGAAAACTTACACAATCAATTAAAAATACTTGGAAGATATCCCATTCCCACGAACTAAGAAAACTGTGAATAAATTTTTGCACTTCCACGCATAATGGATGATAGATTCCTTGGTGCATAATGTTGTGTGTTTAACTTTCTGTCGCTAGCTTTTCTTTTTGTATGATCTTTTATGCTATTTTTTCTTATGTCTTTTTGTTTGCATGATTAGTTCTTTCCAAAAAATTATAGTATGTATAAATGGTTGATTCATGGAAAGCTTGTATACTGTTATTCCATGTTCATTTATTTGAAATACATGGTTTTTCCAATGACTTCAATGGCTTTGCAGGAAACCCCAATGGATGTCAAACCCACAATCATGGAGGGAGAATTTTCGGGCATCCAGGATGAACATGTACTATCTTTTTTCCCCCATTCAAATACATTCCTTTTGGCTAGCTTGTCTTATTTGCAAGCCAATGCATACAATATTATGTATGCAGGGAACTCCTGAGGATCCTGGTAAAACTATGACCGAAGGCTCCAGTAGTCCTTCCCTTGACCCGGTTGAGGAAGTATGCTCATATCTTAGTGGATTTTATGCCTCCTATTCTTATATGACTTTAATTTACCTGCATTTGGAAGTCTCTGTTGGATCTTTATGTACCCTTGCTTTTACCTTGGAGTAGGTGCTTCACCTTTTCACTAAGATATCCTAAATTACCTAACCCCATTATGGAAATCAGCACTTCCACCCAGTTAGTCTGTGTTGACAAATTGGTTCATGGAAGATTGGTGCTCTTATCTCTGTTTACTGTACAGATAAAGGTGCTTGGCAGATGTATTCCTCCACTTGAAAAGATGTGTCCTATATTTGAAGTTAGTTTGTCTTAGTCACCCTATTGCATAATTTCATTAGCTAGTTTGCTCGAATTGAACGCTGGATCAATAAATCGAGGATGCTTGATTGATGAGAATCTTGTTAACCTGCACAGATGCTATATTGCATCACTCTGTCTATTTTCTATTTTTGTGGTGTTTATGAAGACTTCAGCGTTGAAAGCTAAATAAATCCTTGACCACTTTGCTAGTGTGCAATTCCAAAGTAACTTGATGTTTCTTGTAGCGCAGGATATAAATGAAACCACTGTAGAGCTTACAAATTCGTTGCCGAAGCAAATTGCCAATCATTCAACAAATGGTGATGAGCAGGTATTGCTTATTTTTATTTTAAAAAATAAATATAATGAATTATCTTTCATTTGAATGACTTCTTTGGCAAGAGCAAAGCTACTTCAGCTTTTCGTTGGGCTATGATTTGGAGAAGTAAATATTTAATCTCATAAAAAAGATTTCACAGTATCTTAACTTCAAATACTTGATCGAACCCAAGTCGAGCACTTTGGATATCTCATCCAGATTGTTTCATATCTGATGTTTTCAGTATATCACTTTAAACCGTTGATCATTATGTCGAAATAGTAGCTGAATATATACCTAGGATCACGCTCAAAAGGAAACACAAATCCTTTTCCTAGAAAACTATTATTGAAAAAACAGAAAGAAGGCTGTCAACATGGTCATCATGTTATACTTCAAAACGCGGAAGACTCACCCTAATACAAGCCACGTTATCCACCCTCCCAGTTCGAAATGCCACAAAAAATGGCTTCGGATGTAGACAGATTATTCAAGAACTATTTGTGGAAAGATGACCCATATCTTGTTTGATGGACAAAAAAGGGAGGCCTCGGTCCTTTCTTGATAAAGAAGAACAAATCGGAGTGAAATGATAGAATGCAGAAAGTAGTCCGAATCGGAGGTTTAGACATTCACAATCTCTGTTTAACCAAACCCAACCACACCAATAGATGGCCTATGTATAAATTATCTTCCGTTTCATGCGTTTACTATTTTCTTCTCCCTTGTTTTGCTTCAGGCAGTTAGAAGTTAAACTAAATGTAAGGTCCACTCTGGTACAAAGTAATCCTTGTCCTAGTAGTCTGTAATTCAACCTCTTTAATATCGTTGCTGCTCCCCTTCTCTTTAATTTCATTGGACATTGTCACTTGAGTCCTTTGACTAGGAACCTTCCCTTCTGCTGACCTCTAAAATTAGATGCTAGAAATTCTTGCAAGCTTTATATTAGTTGAAATGAAACTTAGTTAAAAGTTGTTGTTTCAAGTATAGACTAAGCTGTTATCATTATTTTTTGCTTGTATAAACCATCTGATGGCGGCTGCCGGCTGAGCTAGTTGCATCCTAAACTTTTTTAGATTAGGTGCTGATAGATATAGACGGACCGTAATTGCATTAGCAAGTGGCTTCATAGATTTGCTGCAATTAATACTTTTTGCTAATACTTCCTTCACTTTTGAACTACTTAATTCACAAAGCGGTATTGATTTGCTGCATTTAATATTTTTTGGGTTGATATTCATTTGCTTATACTAGTTTTTATCTTCAGGAACCTCTTATTGAACTTGCTAATCCTTCGGATACCGATATAGACATCCCCACTAACTTTGATTAGAAGGTAATCATTTGCTTAAGGCAATAGGTCTCGGAGATTTCAAATAATACTTCGGCTGTTAATAATTTCTTGTGGCCGTATAATTCCTAGATGTCAAAAGTTACTATCAACCATGGAGTGGCAGATAGGACTTGTGTAATTACAAAAATTTCCATGACATAAGGTTCAAGTGTGCAGTGGTCAATCTTTTGGTTGGGACGTTGCGCGCTGCTTTCAGCTTAAGTTAGGTCGTCTAACAGTGTTGATATTGCTGCCAGAAACTATGTGTGTTCACTGTACGAGTCGAGTTGTTAGGGGATACGCTTGAGTTCTTCAATCGGTGTATGATCCAAGTGATTCGTTTGGTAAGGTAACTACTCGATTCAATTTTATTTGAAGGTCTGCTTCCATAATTTATCGTCATGATGATGAAGGGATCAAATGCTTGTGGTGTTTGTATCATAAGATGGGCTTTTCTTTTTTGGTTCTAATTGACAATTTGATATACAATGACTTGAGCAATTGCTAGTAGAATAAACTTGCACATTACGAGCCCTGTAATTCCAGCGATGGCCCCCTTCCCTCCCCCTTCATCTGGGACCTATTTAGTGTAGAAGATGATGGATGCCAATTACAATATTGGAAGCTTTGTTCTGTTCTGTTTGGCATGTATAGAAATCATTTGAAAGGAAAATTTACGAATTATCTTGTCATAATCCTTTGTTATTTTCCTCCCATCATCATCATGGGCGTGGGTGCTACTTGCAAATTATACCGGTG

mRNA sequence

ATGGCGGCTGCAAATCCTCAGCCTTTGCAAGCGCGTCCCTTCCAGGAACATGTCCAAGTTCCTACAATGATGGGGAATGACGACGGTGAATATGAAGATGATGGTGGCGGCGGCGGCGGCGGAGATGTTATGGATGATGTCGAAGGGGCTCATATGACTTCGGTGAGCGTAGTGAAGCATGGTGGGTTGGTCATGGCGTCTAGAACTAGTGAGCTTACGCTTTCTTTTGAGGGCGAGGTTTATGTGTTCCCCGCAGTTACTCCCGAAAAGGTACAAGCTGTGCTCTTACTTCTTGGAGGACGTGATGTACCAACCGGTGTGCCTACAATGGAAGTACCATACGATGATAACAACAGGGGTATGTTTGACACCCCAAAGCGCTCCAACTTATCACGGAGAATTGCCTCCCTGGTTCGGTTTCGTGAAAAGCGGAAGGAGAGATGTTTTGACAAGAAAATTAGGTACACCGTACGGAAAGAGGTTGCACAGAGGATGCACCGTAAGAATGGCCAGTTTGCATCCTTAAAAGAAGGTTCAGGTGCTTCAAGTTGGGAGTCAGCACATAGTTGCCTCCAAGATGGTAGTCGTTCTGAAACTGTTTTGCGGAAATGTCAACATTGTGGCGTTAGCGAGAACAATACACCTGCAATGCGTCGTGGGCCTGCTGGACCTAGGACTTTATGCAATGCATGTGGTCTGATGTGGGCAAACAAGGGCACGTTGAGAGATCTCAGCAAGGGAGGGAGAAATGTATCTCTGGATCATATGGAACCTGAAACCCCAATGGATGTCAAACCCACAATCATGGAGGGAGAATTTTCGGGCATCCAGGATGAACATGGAACTCCTGAGGATCCTGGTAAAACTATGACCGAAGGCTCCAGTAGTCCTTCCCTTGACCCGGTTGAGGAAGATATAAATGAAACCACTGTAGAGCTTACAAATTCGTTGCCGAAGCAAATTGCCAATCATTCAACAAATGGTGATGAGCAGGAACCTCTTATTGAACTTGCTAATCCTTCGGATACCGATATAGACATCCCCACTAACTTTGATTAGAAGATGTCAAAAGTTACTATCAACCATGGAGTGGCAGATAGGACTTGTGTAATTACAAAAATTTCCATGACATAAGGTTCAAGTGTGCAGTGGTCAATCTTTTGGTTGGGACGTTGCGCGCTGCTTTCAGCTTAAGTTAGGTCGTCTAACAGTGTTGATATTGCTGCCAGAAACTATGTGTGTTCACTGTACGAGTCGAGTTGTTAGGGGATACGCTTGAGTTCTTCAATCGGTGTATGATCCAAGTGATTCGTTTGGTAAGGTAACTACTCGATTCAATTTTATTTGAAGGTCTGCTTCCATAATTTATCGTCATGATGATGAAGGGATCAAATGCTTGTGGTGTTTGTATCATAAGATGGGCTTTTCTTTTTTGGTTCTAATTGACAATTTGATATACAATGACTTGAGCAATTGCTAGTAGAATAAACTTGCACATTACGAGCCCTGTAATTCCAGCGATGGCCCCCTTCCCTCCCCCTTCATCTGGGACCTATTTAGTGTAGAAGATGATGGATGCCAATTACAATATTGGAAGCTTTGTTCTGTTCTGTTTGGCATGTATAGAAATCATTTGAAAGGAAAATTTACGAATTATCTTGTCATAATCCTTTGTTATTTTCCTCCCATCATCATCATGGGCGTGGGTGCTACTTGCAAATTATACCGGTG

Coding sequence (CDS)

ATGGCGGCTGCAAATCCTCAGCCTTTGCAAGCGCGTCCCTTCCAGGAACATGTCCAAGTTCCTACAATGATGGGGAATGACGACGGTGAATATGAAGATGATGGTGGCGGCGGCGGCGGCGGAGATGTTATGGATGATGTCGAAGGGGCTCATATGACTTCGGTGAGCGTAGTGAAGCATGGTGGGTTGGTCATGGCGTCTAGAACTAGTGAGCTTACGCTTTCTTTTGAGGGCGAGGTTTATGTGTTCCCCGCAGTTACTCCCGAAAAGGTACAAGCTGTGCTCTTACTTCTTGGAGGACGTGATGTACCAACCGGTGTGCCTACAATGGAAGTACCATACGATGATAACAACAGGGGTATGTTTGACACCCCAAAGCGCTCCAACTTATCACGGAGAATTGCCTCCCTGGTTCGGTTTCGTGAAAAGCGGAAGGAGAGATGTTTTGACAAGAAAATTAGGTACACCGTACGGAAAGAGGTTGCACAGAGGATGCACCGTAAGAATGGCCAGTTTGCATCCTTAAAAGAAGGTTCAGGTGCTTCAAGTTGGGAGTCAGCACATAGTTGCCTCCAAGATGGTAGTCGTTCTGAAACTGTTTTGCGGAAATGTCAACATTGTGGCGTTAGCGAGAACAATACACCTGCAATGCGTCGTGGGCCTGCTGGACCTAGGACTTTATGCAATGCATGTGGTCTGATGTGGGCAAACAAGGGCACGTTGAGAGATCTCAGCAAGGGAGGGAGAAATGTATCTCTGGATCATATGGAACCTGAAACCCCAATGGATGTCAAACCCACAATCATGGAGGGAGAATTTTCGGGCATCCAGGATGAACATGGAACTCCTGAGGATCCTGGTAAAACTATGACCGAAGGCTCCAGTAGTCCTTCCCTTGACCCGGTTGAGGAAGATATAAATGAAACCACTGTAGAGCTTACAAATTCGTTGCCGAAGCAAATTGCCAATCATTCAACAAATGGTGATGAGCAGGAACCTCTTATTGAACTTGCTAATCCTTCGGATACCGATATAGACATCCCCACTAACTTTGATTAG

Protein sequence

MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKHGGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRGMFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSGASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLDPVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD

Homology

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BLAST of CmoCh05G005610 vs. ExPASy Swiss-Prot
Match: Q8GXL7 (GATA transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=GATA24 PE=1 SV=2)

HSP 1 Score: 203.0 bits (515), Expect = 5.6e-51
Identity = 129/255 (50.59%), Postives = 154/255 (60.39%), Query Frame = 0


Query: 3   AANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSV----SVV 62
           A NP  +Q      H      + N++   +D   GG    V  D+      S      VV
Sbjct: 16  AQNPMHVQYEDHGLH-----HIDNENSMMDDHADGGMDEGVETDIPSHPGNSADNRGEVV 75

Query: 63  KHGGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNN 122
             G         +LTLSF+G+VYVF  V+PEKVQAVLLLLGGR+VP  +PT       NN
Sbjct: 76  DRG----IENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNN 135

Query: 123 R--GMFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLK 182
           R  G+  TP+R ++ +R+ASL+RFREKRK R FDK IRYTVRKEVA RM RK GQF S K
Sbjct: 136 RVLGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAK 195

Query: 183 -----EGSGASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNAC 242
                 GS  S W S  S   +G+ ++     C+HCG SE +TP MRRGP GPRTLCNAC
Sbjct: 196 SSNDDSGSTGSDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNAC 255

Query: 243 GLMWANKGTLRDLSK 247
           GLMWANKGTLRDLSK
Sbjct: 256 GLMWANKGTLRDLSK 261

[Close]

BLAST of CmoCh05G005610 vs. ExPASy Swiss-Prot
Match: Q8H1G0 (GATA transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=GATA28 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.7e-50
Identity = 119/226 (52.65%), Postives = 146/226 (64.60%), Query Frame = 0


Query: 33  DDGGGGGGGDVMDDVEGAHMTSVS-----VVKHGGLVMASRTSELTLSFEGEVYVFPAVT 92
           DDG  GG  + ++    +H  +V+     VV  G    + +  +LTLSF+G+VYVF +V 
Sbjct: 44  DDGNAGGMSEGVETDIPSHPGNVTDNRGEVVDRG----SEQGDQLTLSFQGQVYVFDSVL 103

Query: 93  PEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNR--GMFDTPKRSNLSRRIASLVRFREKRK 152
           PEKVQAVLLLLGGR++P   P        NNR   +  TP+R ++ +R+ASLVRFREKRK
Sbjct: 104 PEKVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRK 163

Query: 153 ERCFDKKIRYTVRKEVAQRMHRKNGQFASLKE-----GSGASSWESAHSCLQDGSRSETV 212
            R FDKKIRYTVRKEVA RM R  GQF S K       S  SSW S  +   + S ++  
Sbjct: 164 GRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQ 223

Query: 213 LRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSK 247
              C+HCG+ E +TP MRRGPAGPRTLCNACGLMWANKG  RDLSK
Sbjct: 224 EISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSK 265

[Close]

BLAST of CmoCh05G005610 vs. ExPASy Swiss-Prot
Match: A2XKR7 (GATA transcription factor 18 OS=Oryza sativa subsp. indica OX=39946 GN=GATA18 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.8e-48
Identity = 128/277 (46.21%), Postives = 167/277 (60.29%), Query Frame = 0


Query: 25  GNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKHGGLVMASRTSELTLSFEGEVYVFP 84
           G ++ E EDD   G   ++    + A    VS +  G        ++LTL F+GEVYVF 
Sbjct: 40  GTEEDEEEDDDEEGDEEELPPAEDPAAPEPVSALLPGS------PNQLTLLFQGEVYVFE 99

Query: 85  AVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRGMFDTPKRSNL-SRRIASLVRFREK 144
           +VTPEKVQAVLLLLG  ++P G+  M +P    NRG  D  +R+++ ++R+ASL+RFREK
Sbjct: 100 SVTPEKVQAVLLLLGSCEMPPGLANMVLPNQRENRGYDDLLQRTDIPAKRVASLIRFREK 159

Query: 145 RKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSGASSWESAHSCLQDGSRSETVLR- 204
           RKER FDKKIRY VRKEVA RM R+ GQFA      G S         Q GS  + + R 
Sbjct: 160 RKERNFDKKIRYAVRKEVALRMQRRKGQFAGRANMEGESLSPGCELASQ-GSGQDFLSRE 219

Query: 205 -KCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRNVSLDHMEPETP 264
            KCQ+CG SE  TPAMRRGPAGPRTLCNACGLMWANKGTLR+  K     S+   E ++ 
Sbjct: 220 SKCQNCGTSEKMTPAMRRGPAGPRTLCNACGLMWANKGTLRNCPKAKVESSVVATE-QSN 279

Query: 265 MDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPS 299
             V P+ ++ +   + +        G+ M  G S+P+
Sbjct: 280 AAVSPSGIDNKELVVPNPENITASHGEVM--GDSTPA 306

[Close]

BLAST of CmoCh05G005610 vs. ExPASy Swiss-Prot
Match: Q10F25 (GATA transcription factor 18 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA18 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.8e-48
Identity = 128/277 (46.21%), Postives = 167/277 (60.29%), Query Frame = 0


Query: 25  GNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKHGGLVMASRTSELTLSFEGEVYVFP 84
           G ++ E EDD   G   ++    + A    VS +  G        ++LTL F+GEVYVF 
Sbjct: 40  GTEEDEEEDDDEEGDEEELPPAEDPAAPEPVSALLPGS------PNQLTLLFQGEVYVFE 99

Query: 85  AVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRGMFDTPKRSNL-SRRIASLVRFREK 144
           +VTPEKVQAVLLLLG  ++P G+  M +P    NRG  D  +R+++ ++R+ASL+RFREK
Sbjct: 100 SVTPEKVQAVLLLLGRSEMPPGLANMVLPNQRENRGYDDLLQRTDIPAKRVASLIRFREK 159

Query: 145 RKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSGASSWESAHSCLQDGSRSETVLR- 204
           RKER FDKKIRY VRKEVA RM R+ GQFA      G S         Q GS  + + R 
Sbjct: 160 RKERNFDKKIRYAVRKEVALRMQRRKGQFAGRANMEGESLSPGCELASQ-GSGQDFLSRE 219

Query: 205 -KCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRNVSLDHMEPETP 264
            KCQ+CG SE  TPAMRRGPAGPRTLCNACGLMWANKGTLR+  K     S+   E ++ 
Sbjct: 220 SKCQNCGTSEKMTPAMRRGPAGPRTLCNACGLMWANKGTLRNCPKAKVESSVVATE-QSN 279

Query: 265 MDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPS 299
             V P+ ++ +   + +        G+ M  G S+P+
Sbjct: 280 AAVSPSGIDNKELVVPNPENITASHGEVM--GDSTPA 306

[Close]

BLAST of CmoCh05G005610 vs. ExPASy Swiss-Prot
Match: B8AR30 (GATA transcription factor 19 OS=Oryza sativa subsp. indica OX=39946 GN=GATA19 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.1e-46
Identity = 108/210 (51.43%), Postives = 134/210 (63.81%), Query Frame = 0


Query: 33  DDGGGGGGGDVMDDVEGAHMTSVSVVKHGGLVMASRTSELTLSFEGEVYVFPAVTPEKVQ 92
           DDG  G G      VE A   +         ++++ + +LTL ++GEVYVF  V P+KVQ
Sbjct: 15  DDGAAGDGA-----VESAAAEA---------LLSAASEQLTLVYQGEVYVFDPVPPQKVQ 74

Query: 93  AVLLLLGGRDVPTGVPTMEVPYDDNNRGMFDTPKRSNLSRRIASLVRFREKRKERCFDKK 152
           AVLL+LGG D+P G+ +M VP        FD    +  +RRIASL+RFREKRKERCFDKK
Sbjct: 75  AVLLVLGGSDMPPGLVSMAVP------TTFDEKSTTVAARRIASLMRFREKRKERCFDKK 134

Query: 153 IRYTVRKEVAQRMHRKNGQFASLKEGSGASSWESAHSCLQDGSRSETVLRKCQHCGVSEN 212
           IRY+VRKEVAQ+M R+ GQFA   +    S   +      +G         CQ+CG+S  
Sbjct: 135 IRYSVRKEVAQKMKRRKGQFAGRADFGDGSCSSAPCGSTANGEDDHIRETHCQNCGISSR 194

Query: 213 NTPAMRRGPAGPRTLCNACGLMWANKGTLR 243
            TPAMRRGPAGPR+LCNACGLMWANKGTLR
Sbjct: 195 LTPAMRRGPAGPRSLCNACGLMWANKGTLR 204

[Close]

BLAST of CmoCh05G005610 vs. ExPASy TrEMBL
Match: A0A6J1HDR0 (GATA transcription factor 19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463008 PE=3 SV=1)

HSP 1 Score: 701.0 bits (1808), Expect = 2.4e-198
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60
           MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH
Sbjct: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60

Query: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120
           GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG
Sbjct: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120

Query: 121 MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180
           MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG
Sbjct: 121 MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180

Query: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240
           ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT
Sbjct: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240

Query: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD 300
           LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD
Sbjct: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD 300

Query: 301 PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 353
           PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD
Sbjct: 301 PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 352

[Close]

BLAST of CmoCh05G005610 vs. ExPASy TrEMBL
Match: A0A6J1K6T3 (GATA transcription factor 24-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492161 PE=3 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 9.9e-192
Identity = 343/352 (97.44%), Postives = 346/352 (98.30%), Query Frame = 0


Query: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60
           MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDD  GGGGGDVMDDVEGAHMTSVSVVKH
Sbjct: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDD--GGGGGDVMDDVEGAHMTSVSVVKH 60

Query: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120
           GGLVM SRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG
Sbjct: 61  GGLVMVSRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120

Query: 121 MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180
           M DTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG
Sbjct: 121 MVDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180

Query: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240
           ASSWESAHSCLQDGSRSETVLRKCQHCGV+ENNTPAMRRGPAG RTLCNACGLMWANKGT
Sbjct: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVNENNTPAMRRGPAGLRTLCNACGLMWANKGT 240

Query: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD 300
           LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSS+PSLD
Sbjct: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSNPSLD 300

Query: 301 PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 353
           PVEEDINETTVELTNSLP QIANHSTNGDEQEPLIELANPSDTD+DIPTNFD
Sbjct: 301 PVEEDINETTVELTNSLPMQIANHSTNGDEQEPLIELANPSDTDVDIPTNFD 350

[Close]

BLAST of CmoCh05G005610 vs. ExPASy TrEMBL
Match: A0A1S3BAZ6 (GATA transcription factor 24-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488115 PE=3 SV=1)

HSP 1 Score: 651.0 bits (1678), Expect = 2.9e-183
Identity = 327/352 (92.90%), Postives = 336/352 (95.45%), Query Frame = 0


Query: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60
           MAAANPQPLQARPFQEHVQVP+MMG+DDGEYED GGGGGGGDVMDDVE AHMTSVSV  H
Sbjct: 1   MAAANPQPLQARPFQEHVQVPSMMGDDDGEYEDGGGGGGGGDVMDDVEEAHMTSVSVANH 60

Query: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120
           GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVP GVPTMEVPYD NNRG
Sbjct: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPAGVPTMEVPYDHNNRG 120

Query: 121 MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180
           M DTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKE SG
Sbjct: 121 MVDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESSG 180

Query: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240
           ASSWESAHSCLQDG+RSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT
Sbjct: 181 ASSWESAHSCLQDGTRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240

Query: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD 300
           LRDLSKGGRNVSLDHMEPETPMDVKP IMEGEFSGIQDEHGTPEDP KTMTEGSS+PS+D
Sbjct: 241 LRDLSKGGRNVSLDHMEPETPMDVKPVIMEGEFSGIQDEHGTPEDPSKTMTEGSSNPSID 300

Query: 301 PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 353
             EEDINETT +LTNSLP +I NHS+N DEQEPL+ELANPSDTDIDIPTNFD
Sbjct: 301 LDEEDINETTGDLTNSLPMRIVNHSSNDDEQEPLVELANPSDTDIDIPTNFD 352

[Close]

BLAST of CmoCh05G005610 vs. ExPASy TrEMBL
Match: A0A0A0LLS6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370420 PE=3 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 6.0e-181
Identity = 324/352 (92.05%), Postives = 332/352 (94.32%), Query Frame = 0


Query: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60
           MAAANPQPLQARPFQEHVQVP+MM +DDGEYED GGGGGGGDVMDDVE AHMTSVSV  H
Sbjct: 1   MAAANPQPLQARPFQEHVQVPSMMADDDGEYEDGGGGGGGGDVMDDVEEAHMTSVSVANH 60

Query: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120
           GGLVMASR SELTLSFEGEVYVFP VTPEKVQAVLLLLGGRDVP  VPTMEVPYD NNRG
Sbjct: 61  GGLVMASRASELTLSFEGEVYVFPEVTPEKVQAVLLLLGGRDVPADVPTMEVPYDHNNRG 120

Query: 121 MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180
           M DTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKE SG
Sbjct: 121 MVDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESSG 180

Query: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240
           ASSWESAHSCLQDG+RSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT
Sbjct: 181 ASSWESAHSCLQDGTRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240

Query: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD 300
           LRDLSKGGRNVSLDHMEPETPMDVKP IMEGEFSGIQDEHGTPEDP KTMTEGSS+PS+D
Sbjct: 241 LRDLSKGGRNVSLDHMEPETPMDVKPVIMEGEFSGIQDEHGTPEDPSKTMTEGSSNPSID 300

Query: 301 PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 353
             EEDINETT ELTNSLP +I NHS+N DEQEPL+ELANPSDTDIDIPTNFD
Sbjct: 301 LDEEDINETTGELTNSLPMRIVNHSSNDDEQEPLVELANPSDTDIDIPTNFD 352

[Close]

BLAST of CmoCh05G005610 vs. ExPASy TrEMBL
Match: A0A6J1HDR4 (GATA transcription factor 19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463008 PE=3 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 1.8e-180
Identity = 328/352 (93.18%), Postives = 328/352 (93.18%), Query Frame = 0


Query: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60
           MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH
Sbjct: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60

Query: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120
           GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG
Sbjct: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120

Query: 121 MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180
           MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG
Sbjct: 121 MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180

Query: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240
           ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT
Sbjct: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240

Query: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD 300
           LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEH                    
Sbjct: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEH-------------------- 300

Query: 301 PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 353
               DINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD
Sbjct: 301 ----DINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 328

[Close]

BLAST of CmoCh05G005610 vs. NCBI nr
Match: XP_022962606.1 (GATA transcription factor 19-like isoform X1 [Cucurbita moschata] >XP_022962608.1 GATA transcription factor 19-like isoform X1 [Cucurbita moschata] >XP_022962609.1 GATA transcription factor 19-like isoform X1 [Cucurbita moschata] >XP_022962610.1 GATA transcription factor 19-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 701.0 bits (1808), Expect = 5.0e-198
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60
           MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH
Sbjct: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60

Query: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120
           GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG
Sbjct: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120

Query: 121 MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180
           MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG
Sbjct: 121 MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180

Query: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240
           ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT
Sbjct: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240

Query: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD 300
           LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD
Sbjct: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD 300

Query: 301 PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 353
           PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD
Sbjct: 301 PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 352

[Close]

BLAST of CmoCh05G005610 vs. NCBI nr
Match: KAG6598723.1 (GATA transcription factor 24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 688.7 bits (1776), Expect = 2.6e-194
Identity = 347/353 (98.30%), Postives = 350/353 (99.15%), Query Frame = 0


Query: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDD-GGGGGGGDVMDDVEGAHMTSVSVVK 60
           MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDD GGGGGGGD MDDVEGAHMTSVSVVK
Sbjct: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGGDFMDDVEGAHMTSVSVVK 60

Query: 61  HGGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNR 120
           HGGLVMASRTSELTLSFEGEVYVFPAV+PEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNR
Sbjct: 61  HGGLVMASRTSELTLSFEGEVYVFPAVSPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNR 120

Query: 121 GMFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGS 180
           GMFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGS
Sbjct: 121 GMFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGS 180

Query: 181 GASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKG 240
           GASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKG
Sbjct: 181 GASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKG 240

Query: 241 TLRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSL 300
           TLRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSS+PSL
Sbjct: 241 TLRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSNPSL 300

Query: 301 DPVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 353
           DPVEED NETT+ELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD
Sbjct: 301 DPVEEDTNETTLELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 353

[Close]

BLAST of CmoCh05G005610 vs. NCBI nr
Match: XP_023546303.1 (GATA transcription factor 19-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546304.1 GATA transcription factor 19-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546305.1 GATA transcription factor 19-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 687.6 bits (1773), Expect = 5.8e-194
Identity = 346/352 (98.30%), Postives = 348/352 (98.86%), Query Frame = 0


Query: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60
           MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH
Sbjct: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60

Query: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120
           GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGG DVPTGVPTM+VPYDDNNRG
Sbjct: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGCDVPTGVPTMDVPYDDNNRG 120

Query: 121 MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180
           M DTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGS 
Sbjct: 121 MVDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSR 180

Query: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240
           ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT
Sbjct: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240

Query: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD 300
           LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSS+PSLD
Sbjct: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSNPSLD 300

Query: 301 PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 353
           PVEEDINETTVELTNSLP QIANHSTNGDEQEPLIELANPSDTDIDIPTNFD
Sbjct: 301 PVEEDINETTVELTNSLPMQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 352

[Close]

BLAST of CmoCh05G005610 vs. NCBI nr
Match: XP_022997186.1 (GATA transcription factor 24-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 679.1 bits (1751), Expect = 2.0e-191
Identity = 343/352 (97.44%), Postives = 346/352 (98.30%), Query Frame = 0


Query: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60
           MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDD  GGGGGDVMDDVEGAHMTSVSVVKH
Sbjct: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDD--GGGGGDVMDDVEGAHMTSVSVVKH 60

Query: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120
           GGLVM SRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG
Sbjct: 61  GGLVMVSRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120

Query: 121 MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180
           M DTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG
Sbjct: 121 MVDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180

Query: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240
           ASSWESAHSCLQDGSRSETVLRKCQHCGV+ENNTPAMRRGPAG RTLCNACGLMWANKGT
Sbjct: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVNENNTPAMRRGPAGLRTLCNACGLMWANKGT 240

Query: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD 300
           LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSS+PSLD
Sbjct: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSNPSLD 300

Query: 301 PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 353
           PVEEDINETTVELTNSLP QIANHSTNGDEQEPLIELANPSDTD+DIPTNFD
Sbjct: 301 PVEEDINETTVELTNSLPMQIANHSTNGDEQEPLIELANPSDTDVDIPTNFD 350

[Close]

BLAST of CmoCh05G005610 vs. NCBI nr
Match: XP_008444908.1 (PREDICTED: GATA transcription factor 24-like isoform X1 [Cucumis melo] >XP_008444909.1 PREDICTED: GATA transcription factor 24-like isoform X1 [Cucumis melo])

HSP 1 Score: 651.0 bits (1678), Expect = 6.0e-183
Identity = 327/352 (92.90%), Postives = 336/352 (95.45%), Query Frame = 0


Query: 1   MAAANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSVSVVKH 60
           MAAANPQPLQARPFQEHVQVP+MMG+DDGEYED GGGGGGGDVMDDVE AHMTSVSV  H
Sbjct: 1   MAAANPQPLQARPFQEHVQVPSMMGDDDGEYEDGGGGGGGGDVMDDVEEAHMTSVSVANH 60

Query: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNRG 120
           GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVP GVPTMEVPYD NNRG
Sbjct: 61  GGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPAGVPTMEVPYDHNNRG 120

Query: 121 MFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSG 180
           M DTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKE SG
Sbjct: 121 MVDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESSG 180

Query: 181 ASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240
           ASSWESAHSCLQDG+RSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT
Sbjct: 181 ASSWESAHSCLQDGTRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGT 240

Query: 241 LRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPGKTMTEGSSSPSLD 300
           LRDLSKGGRNVSLDHMEPETPMDVKP IMEGEFSGIQDEHGTPEDP KTMTEGSS+PS+D
Sbjct: 241 LRDLSKGGRNVSLDHMEPETPMDVKPVIMEGEFSGIQDEHGTPEDPSKTMTEGSSNPSID 300

Query: 301 PVEEDINETTVELTNSLPKQIANHSTNGDEQEPLIELANPSDTDIDIPTNFD 353
             EEDINETT +LTNSLP +I NHS+N DEQEPL+ELANPSDTDIDIPTNFD
Sbjct: 301 LDEEDINETTGDLTNSLPMRIVNHSSNDDEQEPLVELANPSDTDIDIPTNFD 352

[Close]

BLAST of CmoCh05G005610 vs. TAIR 10
Match: AT3G21175.2 (ZIM-like 1 )

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-53
Identity = 129/253 (50.99%), Postives = 154/253 (60.87%), Query Frame = 0


Query: 3   AANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSV----SVV 62
           A NP  +Q      H      + N++   +D   GG    V  D+      S      VV
Sbjct: 16  AQNPMHVQYEDHGLH-----HIDNENSMMDDHADGGMDEGVETDIPSHPGNSADNRGEVV 75

Query: 63  KHGGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNN 122
             G         +LTLSF+G+VYVF  V+PEKVQAVLLLLGGR+VP  +PT       NN
Sbjct: 76  DRG----IENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNN 135

Query: 123 RGMFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLK-- 182
           RG+  TP+R ++ +R+ASL+RFREKRK R FDK IRYTVRKEVA RM RK GQF S K  
Sbjct: 136 RGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSS 195

Query: 183 ---EGSGASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGL 242
               GS  S W S  S   +G+ ++     C+HCG SE +TP MRRGP GPRTLCNACGL
Sbjct: 196 NDDSGSTGSDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGL 255

Query: 243 MWANKGTLRDLSK 247
           MWANKGTLRDLSK
Sbjct: 256 MWANKGTLRDLSK 259

[Close]

BLAST of CmoCh05G005610 vs. TAIR 10
Match: AT3G21175.1 (ZIM-like 1 )

HSP 1 Score: 203.0 bits (515), Expect = 4.0e-52
Identity = 129/255 (50.59%), Postives = 154/255 (60.39%), Query Frame = 0


Query: 3   AANPQPLQARPFQEHVQVPTMMGNDDGEYEDDGGGGGGGDVMDDVEGAHMTSV----SVV 62
           A NP  +Q      H      + N++   +D   GG    V  D+      S      VV
Sbjct: 16  AQNPMHVQYEDHGLH-----HIDNENSMMDDHADGGMDEGVETDIPSHPGNSADNRGEVV 75

Query: 63  KHGGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDDNN 122
             G         +LTLSF+G+VYVF  V+PEKVQAVLLLLGGR+VP  +PT       NN
Sbjct: 76  DRG----IENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNN 135

Query: 123 R--GMFDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLK 182
           R  G+  TP+R ++ +R+ASL+RFREKRK R FDK IRYTVRKEVA RM RK GQF S K
Sbjct: 136 RVLGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAK 195

Query: 183 -----EGSGASSWESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNAC 242
                 GS  S W S  S   +G+ ++     C+HCG SE +TP MRRGP GPRTLCNAC
Sbjct: 196 SSNDDSGSTGSDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNAC 255

Query: 243 GLMWANKGTLRDLSK 247
           GLMWANKGTLRDLSK
Sbjct: 256 GLMWANKGTLRDLSK 261

[Close]

BLAST of CmoCh05G005610 vs. TAIR 10
Match: AT1G51600.1 (ZIM-LIKE 2 )

HSP 1 Score: 200.3 bits (508), Expect = 2.6e-51
Identity = 119/226 (52.65%), Postives = 146/226 (64.60%), Query Frame = 0


Query: 33  DDGGGGGGGDVMDDVEGAHMTSVS-----VVKHGGLVMASRTSELTLSFEGEVYVFPAVT 92
           DDG  GG  + ++    +H  +V+     VV  G    + +  +LTLSF+G+VYVF +V 
Sbjct: 44  DDGNAGGMSEGVETDIPSHPGNVTDNRGEVVDRG----SEQGDQLTLSFQGQVYVFDSVL 103

Query: 93  PEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNR--GMFDTPKRSNLSRRIASLVRFREKRK 152
           PEKVQAVLLLLGGR++P   P        NNR   +  TP+R ++ +R+ASLVRFREKRK
Sbjct: 104 PEKVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRK 163

Query: 153 ERCFDKKIRYTVRKEVAQRMHRKNGQFASLKE-----GSGASSWESAHSCLQDGSRSETV 212
            R FDKKIRYTVRKEVA RM R  GQF S K       S  SSW S  +   + S ++  
Sbjct: 164 GRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQ 223

Query: 213 LRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSK 247
              C+HCG+ E +TP MRRGPAGPRTLCNACGLMWANKG  RDLSK
Sbjct: 224 EISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSK 265

[Close]

BLAST of CmoCh05G005610 vs. TAIR 10
Match: AT1G51600.2 (ZIM-LIKE 2 )

HSP 1 Score: 200.3 bits (508), Expect = 2.6e-51
Identity = 119/226 (52.65%), Postives = 146/226 (64.60%), Query Frame = 0


Query: 33  DDGGGGGGGDVMDDVEGAHMTSVS-----VVKHGGLVMASRTSELTLSFEGEVYVFPAVT 92
           DDG  GG  + ++    +H  +V+     VV  G    + +  +LTLSF+G+VYVF +V 
Sbjct: 44  DDGNAGGMSEGVETDIPSHPGNVTDNRGEVVDRG----SEQGDQLTLSFQGQVYVFDSVL 103

Query: 93  PEKVQAVLLLLGGRDVPTGVPTMEVPYDDNNR--GMFDTPKRSNLSRRIASLVRFREKRK 152
           PEKVQAVLLLLGGR++P   P        NNR   +  TP+R ++ +R+ASLVRFREKRK
Sbjct: 104 PEKVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRK 163

Query: 153 ERCFDKKIRYTVRKEVAQRMHRKNGQFASLKE-----GSGASSWESAHSCLQDGSRSETV 212
            R FDKKIRYTVRKEVA RM R  GQF S K       S  SSW S  +   + S ++  
Sbjct: 164 GRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQ 223

Query: 213 LRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSK 247
              C+HCG+ E +TP MRRGPAGPRTLCNACGLMWANKG  RDLSK
Sbjct: 224 EISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSK 265

[Close]

BLAST of CmoCh05G005610 vs. TAIR 10
Match: AT4G24470.1 (GATA-type zinc finger protein with TIFY domain )

HSP 1 Score: 166.4 bits (420), Expect = 4.2e-41
Identity = 111/255 (43.53%), Postives = 146/255 (57.25%), Query Frame = 0


Query: 15  QEHVQVPTMMGN---DDGEY--EDDGGGGGGGDVMDDVEGAHMTSVSVVKHGGLVMASR- 74
           ++HV      G+   DD E     D   G   D++ D  G+ +  V+    G  ++ SR 
Sbjct: 22  EDHVSASATSGHIPYDDMEEIPHPDSIYGAASDLIPD--GSQL--VAHRSDGSELLVSRP 81

Query: 75  ---TSELTLSFEGEVYVFPAVTPEKVQAVLLLLGG-RDVPTGVPTMEVPYDDNNRGMFDT 134
               ++LT+SF G+VYVF AV  +KV AVL LLGG  ++  G   ME+    N+  + + 
Sbjct: 82  PEGANQLTISFRGQVYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQNHMPVVEY 141

Query: 135 PKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKEGSGASSW 194
             R +L +R  SL RFR+KR  RCF+KK+RY VR+EVA RM R  GQF S K   GA + 
Sbjct: 142 QSRCSLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNS 201

Query: 195 ESAHSCLQDGSRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDL 254
            +     QD +  E     C HCG+S   TP MRRGP+GPRTLCNACGL WAN+GTLRDL
Sbjct: 202 GTDQDSAQDDAHPEI---SCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDL 261

Query: 255 SKGGRNVSLDHMEPE 260
           SK      L  M+P+
Sbjct: 262 SKKTEENQLALMKPD 269

The following BLAST results are available for this feature:

BLAST of CmoCh05G005610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXL7	5.6e-51	50.59	GATA transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=GATA24 PE=1 SV=2	[more]
Q8H1G0	3.7e-50	52.65	GATA transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=GATA28 PE=1 SV=1	[more]
A2XKR7	5.8e-48	46.21	GATA transcription factor 18 OS=Oryza sativa subsp. indica OX=39946 GN=GATA18 PE...	[more]
Q10F25	5.8e-48	46.21	GATA transcription factor 18 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA18 ...	[more]
B8AR30	7.1e-46	51.43	GATA transcription factor 19 OS=Oryza sativa subsp. indica OX=39946 GN=GATA19 PE...	[more]

BLAST of CmoCh05G005610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDR0	2.4e-198	100.00	GATA transcription factor 19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1K6T3	9.9e-192	97.44	GATA transcription factor 24-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A1S3BAZ6	2.9e-183	92.90	GATA transcription factor 24-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A0A0LLS6	6.0e-181	92.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370420 PE=3 SV=1	[more]
A0A6J1HDR4	1.8e-180	93.18	GATA transcription factor 19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CmoCh05G005610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962606.1	5.0e-198	100.00	GATA transcription factor 19-like isoform X1 [Cucurbita moschata] >XP_022962608....	[more]
KAG6598723.1	2.6e-194	98.30	GATA transcription factor 24, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023546303.1	5.8e-194	98.30	GATA transcription factor 19-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_02...	[more]
XP_022997186.1	2.0e-191	97.44	GATA transcription factor 24-like isoform X1 [Cucurbita maxima]	[more]
XP_008444908.1	6.0e-183	92.90	PREDICTED: GATA transcription factor 24-like isoform X1 [Cucumis melo] >XP_00844...	[more]

BLAST of CmoCh05G005610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21175.2	1.2e-53	50.99	ZIM-like 1	[more]
AT3G21175.1	4.0e-52	50.59	ZIM-like 1	[more]
AT1G51600.1	2.6e-51	52.65	ZIM-LIKE 2	[more]
AT1G51600.2	2.6e-51	52.65	ZIM-LIKE 2	[more]
AT4G24470.1	4.2e-41	43.53	GATA-type zinc finger protein with TIFY domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010399	Tify domain	SMART	SM00979	tify_2	coord: 65..100 e-value: 4.2E-7 score: 39.6
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 68..99 e-value: 2.1E-10 score: 39.7
IPR010399	Tify domain	PROSITE	PS51320	TIFY	coord: 65..100 score: 12.941822
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 198..251 e-value: 4.9E-8 score: 42.7
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 204..240 e-value: 1.3E-13 score: 50.3
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 204..231
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 198..246 score: 8.52356
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 203..247 e-value: 3.50404E-16 score: 70.0942
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 196..254 e-value: 5.5E-14 score: 53.6
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 133..174 e-value: 1.3E-13 score: 50.8
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 133..175 score: 12.649593
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..352
None	No IPR available	PANTHER	PTHR46125:SF7	GATA TRANSCRIPTION FACTOR 28-LIKE ISOFORM X1	coord: 1..352
None	No IPR available	PANTHER	PTHR46125	GATA TRANSCRIPTION FACTOR 28	coord: 1..352
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 200..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G005610.1	CmoCh05G005610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding