CmoCh05G005210 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G005210
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	WW domain-containing protein
Location	Cmo_Chr05: 2519869 .. 2520560 (+)
RNA-Seq Expression	CmoCh05G005210
Synteny	CmoCh05G005210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAACAGCCATTAAATTTGGAGCCATGGTTCCCTTCCAATCCCACACTTCTCTAAATGATTTAGCTAAGAAGAGGAAGTGGGAAGAGCCAACGTCGACACCACCGACATTGCTAAACTCCATGTTCGATATCGAGCTTCACCTCGAAACTCCGTTGCCTTCCGATTGGCAAAGATGCCTCGACATTCAGGTATTTTCTTTTTCCTTAAAAACCCCTTTCAAATTTCAAAACGAGCCTTAGTTTTTGAGTTTAGCGATGATTTCGTTTCTTCCTTAGTCGGGAAAGATACACTTCTACAATACGACAACTCAAAAAAAAACATGGAAAGATCCTAGAGATAAGCTCGATAAAGACGAGGGGGAAGAGGAAGAAGACGACAACGACACGAGTTTGGACCTCGAACTCAACCTGACTTGCGAATCGCTCGACAAGAACAATAATAATCAAACAACTCAAGGAGGGCGTCGAGCCGTAAACAACGGGTCATCCGCTGTGATGGTGGCGGCCGTTTGCATTAAATGCCACTTATTGGTAATGCTGAGTAAATCTTCACCGGAGTGTCCTAACTGCAAATTCATGAACTCGCCGCCGGAGCAAACTCCACCGGCGATACTCAAGCGCCGGCGTCACCTTTCTTGGTAATTAAAGTAATAATTGTATTATTATTAAATTAGAAGAAAACAAAACAT

mRNA sequence

AAGAAAACAGCCATTAAATTTGGAGCCATGGTTCCCTTCCAATCCCACACTTCTCTAAATGATTTAGCTAAGAAGAGGAAGTGGGAAGAGCCAACGTCGACACCACCGACATTGCTAAACTCCATGTTCGATATCGAGCTTCACCTCGAAACTCCGTTGCCTTCCGATTGGCAAAGATGCCTCGACATTCAGTCGGGAAAGATACACTTCTACAATACGACAACTCAAAAAAAAACATGGAAAGATCCTAGAGATAAGCTCGATAAAGACGAGGGGGAAGAGGAAGAAGACGACAACGACACGAGTTTGGACCTCGAACTCAACCTGACTTGCGAATCGCTCGACAAGAACAATAATAATCAAACAACTCAAGGAGGGCGTCGAGCCGTAAACAACGGGTCATCCGCTGTGATGGTGGCGGCCGTTTGCATTAAATGCCACTTATTGGTAATGCTGAGTAAATCTTCACCGGAGTGTCCTAACTGCAAATTCATGAACTCGCCGCCGGAGCAAACTCCACCGGCGATACTCAAGCGCCGGCGTCACCTTTCTTGGTAATTAAAGTAATAATTGTATTATTATTAAATTAGAAGAAAACAAAACAT

Coding sequence (CDS)

ATGGTTCCCTTCCAATCCCACACTTCTCTAAATGATTTAGCTAAGAAGAGGAAGTGGGAAGAGCCAACGTCGACACCACCGACATTGCTAAACTCCATGTTCGATATCGAGCTTCACCTCGAAACTCCGTTGCCTTCCGATTGGCAAAGATGCCTCGACATTCAGTCGGGAAAGATACACTTCTACAATACGACAACTCAAAAAAAAACATGGAAAGATCCTAGAGATAAGCTCGATAAAGACGAGGGGGAAGAGGAAGAAGACGACAACGACACGAGTTTGGACCTCGAACTCAACCTGACTTGCGAATCGCTCGACAAGAACAATAATAATCAAACAACTCAAGGAGGGCGTCGAGCCGTAAACAACGGGTCATCCGCTGTGATGGTGGCGGCCGTTTGCATTAAATGCCACTTATTGGTAATGCTGAGTAAATCTTCACCGGAGTGTCCTAACTGCAAATTCATGAACTCGCCGCCGGAGCAAACTCCACCGGCGATACTCAAGCGCCGGCGTCACCTTTCTTGGTAA

Protein sequence

MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTQKKTWKDPRDKLDKDEGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRRAVNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLSW

Homology

[Close]

BLAST of CmoCh05G005210 vs. ExPASy TrEMBL
Match: A0A6J1HDE8 (uncharacterized protein LOC111462591 OS=Cucurbita moschata OX=3662 GN=LOC111462591 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.8e-96
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60
           MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH
Sbjct: 1   MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60

Query: 61  FYNTTTQKKTWKDPRDKLDKDEGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRRA 120
           FYNTTTQKKTWKDPRDKLDKDEGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRRA
Sbjct: 61  FYNTTTQKKTWKDPRDKLDKDEGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRRA 120

Query: 121 VNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLSW 177
           VNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLSW
Sbjct: 121 VNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLSW 176

[Close]

BLAST of CmoCh05G005210 vs. ExPASy TrEMBL
Match: A0A6J1KDD9 (uncharacterized protein LOC111492228 OS=Cucurbita maxima OX=3661 GN=LOC111492228 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.4e-91
Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 1   MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60
           MVPFQSHTSLNDLAKKRKWEE TSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH
Sbjct: 1   MVPFQSHTSLNDLAKKRKWEEWTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60

Query: 61  FYNTTTQKKTWKDPRDKLDKDEGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRRA 120
           FYNTTTQK+TWKDPRDKLDKDE EE+EDDND SLDLELNLTCESLDKN+NNQTTQGGRRA
Sbjct: 61  FYNTTTQKRTWKDPRDKLDKDEEEEDEDDNDMSLDLELNLTCESLDKNSNNQTTQGGRRA 120

Query: 121 VNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLSW 177
           VNNGSSAVMVAAVC+KCHLLVMLSKSSPECPNCKFMNSPPEQ PPA+LKRRRHLSW
Sbjct: 121 VNNGSSAVMVAAVCMKCHLLVMLSKSSPECPNCKFMNSPPEQIPPAMLKRRRHLSW 176

[Close]

BLAST of CmoCh05G005210 vs. ExPASy TrEMBL
Match: A0A5A7VAF4 (WW domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004890 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.3e-64
Identity = 140/211 (66.35%), Postives = 153/211 (72.51%), Query Frame = 0


Query: 1   MVPFQSH-TSLND-----------LAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDW 60
           MVPFQSH +SLND           LAKKRKWEE     P  LNS+ DIELHLETPLP  W
Sbjct: 1   MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEESMVPTPPPLNSVLDIELHLETPLPFYW 60

Query: 61  QRCLDIQSGKIHFYNTTTQKKTWKDPRDKL-DKDEGEEEE--------DDNDTSLDLELN 120
           QRCLDIQSGKIHFYN TTQK+TW+DPRDKL DKD+ +++E        D ND SLDLELN
Sbjct: 61  QRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDMSLDLELN 120

Query: 121 LTCESLDKNNNNQTTQGGRRAVNNG--------------SSAVMVAAVCIKCHLLVMLSK 177
           LTCES+DKNNNNQT QG RRA+NNG                A MVAAVC++CHLLVML K
Sbjct: 121 LTCESMDKNNNNQTVQGVRRAINNGMVFGLSENYNNNNNKKAEMVAAVCMRCHLLVMLCK 180

[Close]

BLAST of CmoCh05G005210 vs. ExPASy TrEMBL
Match: A0A1S3BAS4 (uncharacterized protein LOC103488058 OS=Cucumis melo OX=3656 GN=LOC103488058 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.3e-64
Identity = 140/211 (66.35%), Postives = 153/211 (72.51%), Query Frame = 0


Query: 1   MVPFQSH-TSLND-----------LAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDW 60
           MVPFQSH +SLND           LAKKRKWEE     P  LNS+ DIELHLETPLP  W
Sbjct: 1   MVPFQSHPSSLNDKTSAIQEPADNLAKKRKWEESMVPTPPPLNSVLDIELHLETPLPFYW 60

Query: 61  QRCLDIQSGKIHFYNTTTQKKTWKDPRDKL-DKDEGEEEE--------DDNDTSLDLELN 120
           QRCLDIQSGKIHFYN TTQK+TW+DPRDKL DKD+ +++E        D ND SLDLELN
Sbjct: 61  QRCLDIQSGKIHFYNMTTQKRTWRDPRDKLVDKDDDDDDEEGKDDDCYDKNDMSLDLELN 120

Query: 121 LTCESLDKNNNNQTTQGGRRAVNNG--------------SSAVMVAAVCIKCHLLVMLSK 177
           LTCES+DKNNNNQT QG RRA+NNG                A MVAAVC++CHLLVML K
Sbjct: 121 LTCESMDKNNNNQTVQGVRRAINNGMVFGLSENYNNNNNKKAEMVAAVCMRCHLLVMLCK 180

[Close]

BLAST of CmoCh05G005210 vs. ExPASy TrEMBL
Match: A0A0A0LNT8 (WW domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G368900 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.8e-64
Identity = 139/210 (66.19%), Postives = 156/210 (74.29%), Query Frame = 0


Query: 1   MVPFQSH-TSLND------------LAKKRKWEEP-TSTPPTLLNSMFDIELHLETPLPS 60
           MVPFQSH +SLND            LAKKRKWEE    TPP  LNS+ DIELHLETPLP 
Sbjct: 1   MVPFQSHPSSLNDKITSAIQEPADNLAKKRKWEESMIPTPP--LNSVLDIELHLETPLPF 60

Query: 61  DWQRCLDIQSGKIHFYNTTTQKKTWKDPRDKLDKDEGEEEEDD------NDTSLDLELNL 120
            WQRCLDIQSGKIHFYN TTQK+TWKDPRDKL+KD+ +++E+D      ND SLDLELNL
Sbjct: 61  YWQRCLDIQSGKIHFYNMTTQKRTWKDPRDKLEKDDDDDDEEDDNRYDKNDMSLDLELNL 120

Query: 121 TCESLDKNNNNQTTQGGRRAVNNG--------------SSAVMVAAVCIKCHLLVMLSKS 177
           TCES++KNNN+QT QG RRA+N+G                A MVAAVC++CHLLVML KS
Sbjct: 121 TCESMEKNNNHQTVQGVRRAINDGMMFGLSENYNHNNNKKAEMVAAVCMRCHLLVMLCKS 180

[Close]

BLAST of CmoCh05G005210 vs. NCBI nr
Match: XP_022961983.1 (uncharacterized protein LOC111462591 [Cucurbita moschata])

HSP 1 Score: 361.7 bits (927), Expect = 3.6e-96
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60
           MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH
Sbjct: 1   MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60

Query: 61  FYNTTTQKKTWKDPRDKLDKDEGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRRA 120
           FYNTTTQKKTWKDPRDKLDKDEGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRRA
Sbjct: 61  FYNTTTQKKTWKDPRDKLDKDEGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRRA 120

Query: 121 VNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLSW 177
           VNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLSW
Sbjct: 121 VNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLSW 176

[Close]

BLAST of CmoCh05G005210 vs. NCBI nr
Match: KAG7029628.1 (hypothetical protein SDJN02_07968, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.4 bits (890), Expect = 7.1e-92
Identity = 172/177 (97.18%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60
           MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH
Sbjct: 1   MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60

Query: 61  FYNTTTQKKTWKDPRDKLDKD-EGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRR 120
           FYNTTTQK+TWKDPRDKLDKD E EEEEDDND SLDLELNLTCESLDKNNNNQTTQGGRR
Sbjct: 61  FYNTTTQKRTWKDPRDKLDKDEEEEEEEDDNDMSLDLELNLTCESLDKNNNNQTTQGGRR 120

Query: 121 AVNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLSW 177
           AVNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILK RRHLSW
Sbjct: 121 AVNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKCRRHLSW 177

[Close]

BLAST of CmoCh05G005210 vs. NCBI nr
Match: KAG6598683.1 (hypothetical protein SDJN03_08461, partial [Cucurbita argyrosperma subsp. sororia] >KAG6598686.1 hypothetical protein SDJN03_08464, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 344.7 bits (883), Expect = 4.6e-91
Identity = 169/176 (96.02%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60
           MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH
Sbjct: 1   MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60

Query: 61  FYNTTTQKKTWKDPRDKLDKDEGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRRA 120
           FYNTTTQK+TWKDPRDKLDKDE EEEEDDND SLDLELNLTCESLDKN+NNQTTQGGRRA
Sbjct: 61  FYNTTTQKRTWKDPRDKLDKDEKEEEEDDNDMSLDLELNLTCESLDKNSNNQTTQGGRRA 120

Query: 121 VNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLSW 177
           VNN SS VMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILK RRHLSW
Sbjct: 121 VNNESSDVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKCRRHLSW 176

[Close]

BLAST of CmoCh05G005210 vs. NCBI nr
Match: XP_022997273.1 (uncharacterized protein LOC111492228 [Cucurbita maxima])

HSP 1 Score: 343.2 bits (879), Expect = 1.3e-90
Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 1   MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60
           MVPFQSHTSLNDLAKKRKWEE TSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH
Sbjct: 1   MVPFQSHTSLNDLAKKRKWEEWTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60

Query: 61  FYNTTTQKKTWKDPRDKLDKDEGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRRA 120
           FYNTTTQK+TWKDPRDKLDKDE EE+EDDND SLDLELNLTCESLDKN+NNQTTQGGRRA
Sbjct: 61  FYNTTTQKRTWKDPRDKLDKDEEEEDEDDNDMSLDLELNLTCESLDKNSNNQTTQGGRRA 120

Query: 121 VNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLSW 177
           VNNGSSAVMVAAVC+KCHLLVMLSKSSPECPNCKFMNSPPEQ PPA+LKRRRHLSW
Sbjct: 121 VNNGSSAVMVAAVCMKCHLLVMLSKSSPECPNCKFMNSPPEQIPPAMLKRRRHLSW 176

[Close]

BLAST of CmoCh05G005210 vs. NCBI nr
Match: XP_023546998.1 (uncharacterized protein LOC111805930 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 341.7 bits (875), Expect = 3.9e-90
Identity = 168/177 (94.92%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1   MVPFQSHTSLNDLAKKRKWEEPTSTPPTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60
           MVPFQSHTSLNDLAKKRKWEEPTSTP TLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH
Sbjct: 1   MVPFQSHTSLNDLAKKRKWEEPTSTPSTLLNSMFDIELHLETPLPSDWQRCLDIQSGKIH 60

Query: 61  FYNTTTQKKTWKDPRDKLDKD-EGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRR 120
           FYNTTTQK+TWKDPRDKLDKD E EEEEDDND SLDLELNLTCESLDKN+NNQTTQGGRR
Sbjct: 61  FYNTTTQKRTWKDPRDKLDKDEEEEEEEDDNDMSLDLELNLTCESLDKNSNNQTTQGGRR 120

Query: 121 AVNNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLSW 177
           AVNNGSS VMVAAVC+KCHLLVMLSKSSPECPNCKFMNSPPEQTPPA+LKRRRHLSW
Sbjct: 121 AVNNGSSTVMVAAVCMKCHLLVMLSKSSPECPNCKFMNSPPEQTPPAMLKRRRHLSW 177

[Close]

BLAST of CmoCh05G005210 vs. TAIR 10
Match: AT1G78170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-08
Identity = 50/164 (30.49%), Postives = 71/164 (43.29%), Query Frame = 0


Query: 34  FDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTQKKTWKDPRDKLDKDEGEEEEDDNDTS 93
           FD ELHL TPLPSDWQ           +  T+ + + +  P+D +   + +        S
Sbjct: 55  FDFELHLHTPLPSDWQ--------TKGYSRTSDEHRAY--PKDPVIFGQPK-------MS 114

Query: 94  LDLELNL---------TCESLDKNN-NNQTTQGGRRAVNNGSS----------------- 153
           LDLELNL         T +  + ++ +N+T    +  V   +S                 
Sbjct: 115 LDLELNLSPSGSPSRTTTKKYESSSIHNETVSSSKIKVLTNTSKKSIIGTGLSRSPSWLA 174

Query: 154 -------------AVMVAAVCIKCHLLVMLSKSSPECPNCKFMN 158
                          MV  VC+KCH+LVML  S+P CPNCKFM+
Sbjct: 175 FEGGDDNDVDHKGQEMVTTVCMKCHMLVMLCTSTPVCPNCKFMH 201

[Close]

BLAST of CmoCh05G005210 vs. TAIR 10
Match: AT4G08910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06
Identity = 34/97 (35.05%), Postives = 54/97 (55.67%), Query Frame = 0


Query: 79  DKDEGEEEEDDNDTSLDLELNLTCESLDKNNNNQTTQGGRRAVNNGSSAVMVAAVCIKCH 138
           ++DE +++  +  + L LE   +   +  + ++     G   V   S   MVA VC+KCH
Sbjct: 116 EEDERKKKMMEKGSVLGLETKKSMSRVAFDLDDDCCDRG-DGVGGRSEEEMVARVCMKCH 175

Query: 139 LLVMLSKSSPECPNCKFMNSPPEQTPPAILKRRRHLS 176
           +LVML K+SP CPNCKFM+SP + +   +   +  LS
Sbjct: 176 MLVMLCKASPACPNCKFMHSPEDTSLSLLFTPKPSLS 211

[Close]

BLAST of CmoCh05G005210 vs. TAIR 10
Match: AT1G22250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-05
Identity = 20/36 (55.56%), Postives = 26/36 (72.22%), Query Frame = 0


Query: 122 NNGSSAVMVAAVCIKCHLLVMLSKSSPECPNCKFMN 158
           +N     M+  VC+KCH+LVML KS+  CPNCKFM+
Sbjct: 145 DNQKKQEMITTVCMKCHMLVMLCKSTLVCPNCKFMH 180

[Close]

BLAST of CmoCh05G005210 vs. TAIR 10
Match: AT2G33510.1 (CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 7.0e-05
Identity = 31/124 (25.00%), Postives = 58/124 (46.77%), Query Frame = 0


Query: 36  IELHLETPLPSDWQRCLDIQSGKIHFYNTTTQKKTWKDPRDKL--DKDEGEEE----EDD 95
           +EL+    LP  W++CLD+++G+I++ N     +  +DPR  +  D D G+       ++
Sbjct: 51  LELNSHLSLPCHWEQCLDLKTGEIYYINWKNGMRVKEDPRKVMNADPDSGDSYGTVCSEE 110

Query: 96  NDTSLDLELNLTCESLDKNNNNQTTQGGRRAVNNGSSAVMVAAVCIKCHLLVMLSKSSPE 154
           + +  D E + +  S     N++  +            V+V A C  C +  M+ K   +
Sbjct: 111 DSSYYDSEESSSESSPSSRENHKEEEEEEEEEEEEEEDVLVVAGCKACFMYFMVPKLVED 170

The following BLAST results are available for this feature:

BLAST of CmoCh05G005210 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh05G005210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDE8	1.8e-96	100.00	uncharacterized protein LOC111462591 OS=Cucurbita moschata OX=3662 GN=LOC1114625...	[more]
A0A6J1KDD9	6.4e-91	94.89	uncharacterized protein LOC111492228 OS=Cucurbita maxima OX=3661 GN=LOC111492228...	[more]
A0A5A7VAF4	2.3e-64	66.35	WW domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3BAS4	2.3e-64	66.35	uncharacterized protein LOC103488058 OS=Cucumis melo OX=3656 GN=LOC103488058 PE=...	[more]
A0A0A0LNT8	8.8e-64	66.19	WW domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G368900 PE=4 SV=...	[more]

BLAST of CmoCh05G005210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961983.1	3.6e-96	100.00	uncharacterized protein LOC111462591 [Cucurbita moschata]	[more]
KAG7029628.1	7.1e-92	97.18	hypothetical protein SDJN02_07968, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6598683.1	4.6e-91	96.02	hypothetical protein SDJN03_08461, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022997273.1	1.3e-90	94.89	uncharacterized protein LOC111492228 [Cucurbita maxima]	[more]
XP_023546998.1	3.9e-90	94.92	uncharacterized protein LOC111805930 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh05G005210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78170.1	2.3e-08	30.49	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G08910.1	1.7e-06	35.05	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G22250.1	1.1e-05	55.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G33510.1	7.0e-05	25.00	CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis t...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	SMART	SM00456	ww_5	coord: 43..76 e-value: 4.2E-5 score: 32.9
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 42..76 score: 12.393101
IPR001202	WW domain	CDD	cd00201	WW	coord: 45..76 e-value: 1.14119E-4 score: 35.9666
None	No IPR available	GENE3D	2.20.70.10		coord: 39..89 e-value: 2.9E-10 score: 41.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..94
None	No IPR available	PANTHER	PTHR14791:SF42	F16L1.2 PROTEIN	coord: 7..172
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 7..172
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 42..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G005210.1	CmoCh05G005210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding