CmoCh05G005150 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G005150
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionNDR1/HIN1-like protein 13
LocationCmo_Chr05: 2496014 .. 2496727 (-)
RNA-Seq ExpressionCmoCh05G005150
SyntenyCmoCh05G005150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGCCCGAGCGGATTCACTCTAATCTTCTACCCGTCCATCCCGGGTTCTCTCCCGGCACCTACGTCATTCAGATCCCCAAGGATCAAATCTATCGCATTCCACCTCCTGAAAACGCTTTCATCGTCGAATGTCATCGTAACCCTTCTATCTCCACTTCTAAACGTCGTCGCTCTTGTTGTTTTCGTATCTTCCTCCCTATCTTCATCGTCCTTCTCTTCATCCTCATCCTAGCCCTCGTCCTCCCTCCTCTTCTCACCCCTCCCAAACCCCCCGTCTTTAAGCTCACCAAATTTCGATTCACCCCCTCCACCCGTGACTTCCATATAGTCCTGAATATCCTCAACCCTAACCCTTCTGGCTTCATCGAGTTCAAATCTCCCTCACACGCTTCCCTCTCCTTTCGAAAACACAAAGTCGCTGTGGCTAAGTTCCCTCTTATCCAACAAGAACATGGCTCCCAACGACATGTCGCATTAGCCCTTCACACCAAATCCTCCTCGTTTCCCAAGGAATTGGAGAGACGAATCAAAAACAAGTCGAAGCTCAAAACTTCCATGTCTTTGATGATGGATCTTCCCGCTCATACGAAAGGTCGACTCTCGACACGTCGGAATGTCAAATTTGTTGTCGTTTGTAGCTTCACGGTCAATACGTTGGGAAAAAATTCACATATACTATCACAAGATTGTCAAAGCGAACGCCAATGA

mRNA sequence

ATGGCGGAGCCCGAGCGGATTCACTCTAATCTTCTACCCGTCCATCCCGGGTTCTCTCCCGGCACCTACGTCATTCAGATCCCCAAGGATCAAATCTATCGCATTCCACCTCCTGAAAACGCTTTCATCGTCGAATGTCATCGTAACCCTTCTATCTCCACTTCTAAACGTCGTCGCTCTTGTTGTTTTCGTATCTTCCTCCCTATCTTCATCGTCCTTCTCTTCATCCTCATCCTAGCCCTCGTCCTCCCTCCTCTTCTCACCCCTCCCAAACCCCCCGTCTTTAAGCTCACCAAATTTCGATTCACCCCCTCCACCCGTGACTTCCATATAGTCCTGAATATCCTCAACCCTAACCCTTCTGGCTTCATCGAGTTCAAATCTCCCTCACACGCTTCCCTCTCCTTTCGAAAACACAAAGTCGCTGTGGCTAAGTTCCCTCTTATCCAACAAGAACATGGCTCCCAACGACATGTCGCATTAGCCCTTCACACCAAATCCTCCTCGTTTCCCAAGGAATTGGAGAGACGAATCAAAAACAAGTCGAAGCTCAAAACTTCCATGTCTTTGATGATGGATCTTCCCGCTCATACGAAAGGTCGACTCTCGACACGTCGGAATGTCAAATTTGTTGTCGTTTGTAGCTTCACGGTCAATACGTTGGGAAAAAATTCACATATACTATCACAAGATTGTCAAAGCGAACGCCAATGA

Coding sequence (CDS)

ATGGCGGAGCCCGAGCGGATTCACTCTAATCTTCTACCCGTCCATCCCGGGTTCTCTCCCGGCACCTACGTCATTCAGATCCCCAAGGATCAAATCTATCGCATTCCACCTCCTGAAAACGCTTTCATCGTCGAATGTCATCGTAACCCTTCTATCTCCACTTCTAAACGTCGTCGCTCTTGTTGTTTTCGTATCTTCCTCCCTATCTTCATCGTCCTTCTCTTCATCCTCATCCTAGCCCTCGTCCTCCCTCCTCTTCTCACCCCTCCCAAACCCCCCGTCTTTAAGCTCACCAAATTTCGATTCACCCCCTCCACCCGTGACTTCCATATAGTCCTGAATATCCTCAACCCTAACCCTTCTGGCTTCATCGAGTTCAAATCTCCCTCACACGCTTCCCTCTCCTTTCGAAAACACAAAGTCGCTGTGGCTAAGTTCCCTCTTATCCAACAAGAACATGGCTCCCAACGACATGTCGCATTAGCCCTTCACACCAAATCCTCCTCGTTTCCCAAGGAATTGGAGAGACGAATCAAAAACAAGTCGAAGCTCAAAACTTCCATGTCTTTGATGATGGATCTTCCCGCTCATACGAAAGGTCGACTCTCGACACGTCGGAATGTCAAATTTGTTGTCGTTTGTAGCTTCACGGTCAATACGTTGGGAAAAAATTCACATATACTATCACAAGATTGTCAAAGCGAACGCCAATGA

Protein sequence

MAEPERIHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNPSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIKNKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ
Homology
BLAST of CmoCh05G005150 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12
Identity = 63/240 (26.25%), Postives = 105/240 (43.75%), Query Frame = 0

Query: 9   SNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRS---CCFRI 68
           S   P  P   P TYVIQ+PKDQIYRIPPPENA     HR   +S  K  RS   CCF  
Sbjct: 23  SGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENA-----HRFEQLSRKKTNRSNCRCCFCS 82

Query: 69  FLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRF--------TPSTRDFHIVLNILN 128
           FL    +L+ +  ++  +  L+  P+ P + +  F          +P +  F++ +   N
Sbjct: 83  FLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRN 142

Query: 129 PNPSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERR 188
            N    + ++  S   + +    ++    P+  Q   +   V L L          + + 
Sbjct: 143 GNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKE 202

Query: 189 IKNKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFV--VVCSFTVNTLGKNSHILSQDCQSE 236
           ++N+   KT +   + + A  K +  + +    +  V C  TV+ L   S I+S+ C  +
Sbjct: 203 MRNEVSKKT-VPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHD 256

BLAST of CmoCh05G005150 vs. ExPASy TrEMBL
Match: A0A6J1KBM3 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111492422 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 8.0e-121
Identity = 223/238 (93.70%), Postives = 230/238 (96.64%), Query Frame = 0

Query: 1   MAEPERIHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRS 60
           MAEPER HSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPS+STS RRRS
Sbjct: 1   MAEPERTHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSVSTSNRRRS 60

Query: 61  CCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNP 120
           CCFRIF+PIFIVLLFILILALVLPPLLTPPKPP+FKLTKFRFTPSTR+FHI LNILNPNP
Sbjct: 61  CCFRIFVPIFIVLLFILILALVLPPLLTPPKPPIFKLTKFRFTPSTRNFHIDLNILNPNP 120

Query: 121 SGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK- 180
           SGFIEFKSPSH SL FRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK 
Sbjct: 121 SGFIEFKSPSHVSLFFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIKN 180

Query: 181 NKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
           NKSKLKTSMSLMMDLPAHTKGRLSTRR+VKFVV+CSFTVNT GK+SHILSQDCQ ERQ
Sbjct: 181 NKSKLKTSMSLMMDLPAHTKGRLSTRRDVKFVVICSFTVNTFGKHSHILSQDCQIERQ 238

BLAST of CmoCh05G005150 vs. ExPASy TrEMBL
Match: A0A5A7VCB9 (NDR1/HIN1-like protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001420 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.9e-82
Identity = 165/226 (73.01%), Postives = 193/226 (85.40%), Query Frame = 0

Query: 13  PVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFRIFLPIFIV 72
           P  P FS GTYV+QIPKDQIYRIPPPENA IV+ HRNPS+ TS RRRSCCFRIFLPIFIV
Sbjct: 16  PDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSRRRSCCFRIFLPIFIV 75

Query: 73  LLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNPSGFIEFKSPSHA 132
           LL I+ILAL++PPL+  PKPPVFKLTKF+ TPSTR+F+I L+ILNPN +G I FKSPS  
Sbjct: 76  LLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILNPNSAGSISFKSPSRV 135

Query: 133 SLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK-NKSKLKTSMSLM 192
           SLSFRK ++A  KFPLI+Q+HGS+++VAL+L  K S+FPKEL+RR+K +K+KL TS+SL 
Sbjct: 136 SLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAK-SAFPKELQRRMKSSKTKLHTSLSLK 195

Query: 193 MDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
           M+L A TKGRLS RRNVKFVV CSFTVNTLGK S ILSQDC+SERQ
Sbjct: 196 MNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

BLAST of CmoCh05G005150 vs. ExPASy TrEMBL
Match: A0A1S3BD32 (uncharacterized protein LOC103488571 OS=Cucumis melo OX=3656 GN=LOC103488571 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.9e-82
Identity = 165/226 (73.01%), Postives = 193/226 (85.40%), Query Frame = 0

Query: 13  PVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFRIFLPIFIV 72
           P  P FS GTYV+QIPKDQIYRIPPPENA IV+ HRNPS+ TS RRRSCCFRIFLPIFIV
Sbjct: 16  PDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSRRRSCCFRIFLPIFIV 75

Query: 73  LLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNPSGFIEFKSPSHA 132
           LL I+ILAL++PPL+  PKPPVFKLTKF+ TPSTR+F+I L+ILNPN +G I FKSPS  
Sbjct: 76  LLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILNPNSAGSISFKSPSRV 135

Query: 133 SLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK-NKSKLKTSMSLM 192
           SLSFRK ++A  KFPLI+Q+HGS+++VAL+L  K S+FPKEL+RR+K +K+KL TS+SL 
Sbjct: 136 SLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAK-SAFPKELQRRMKSSKTKLHTSLSLK 195

Query: 193 MDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
           M+L A TKGRLS RRNVKFVV CSFTVNTLGK S ILSQDC+SERQ
Sbjct: 196 MNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

BLAST of CmoCh05G005150 vs. ExPASy TrEMBL
Match: A0A0A0LK43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G307330 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.6e-82
Identity = 172/246 (69.92%), Postives = 197/246 (80.08%), Query Frame = 0

Query: 1   MAEPERIHSNLLPVHPG--------FSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSI 60
           MAEPE       PVHP         FS GTYV+QIPKDQIYRIPPPENA IVE HRNPS+
Sbjct: 1   MAEPEP-----EPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSV 60

Query: 61  STSKRRRSCCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIV 120
            TS RRRSCCFRIFLPIF++LL I+ILAL+LPPLLT PKPPV +L KF+ TPSTR+F I 
Sbjct: 61  VTSSRRRSCCFRIFLPIFVLLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLIN 120

Query: 121 LNILNPNPSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPK 180
           L+ILNPN  G I FKSPS  SLSFRK+++A  KFPLI+Q+HGS++ VAL+L  K S+FPK
Sbjct: 121 LDILNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAK-SAFPK 180

Query: 181 ELERRIK-NKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQD 238
           EL+RR+K NK+KL TS+SL M+L A T GRLS RRNVKFVV CSFTVNTLGKNS ILSQD
Sbjct: 181 ELKRRMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQD 240

BLAST of CmoCh05G005150 vs. ExPASy TrEMBL
Match: A0A6J1GJ42 (NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111454733 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 6.4e-78
Identity = 159/238 (66.81%), Postives = 186/238 (78.15%), Query Frame = 0

Query: 3   EPERIHSNL-LPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSC 62
           + ER  S+  LP  P FS GTYV+QIPKDQIYRIPPPENA IVE HRNPS+ +S+ RRSC
Sbjct: 2   DSERARSSYSLPDPPIFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVESSQHRRSC 61

Query: 63  CFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNPS 122
           C R FLPI  +LL I++LA++LPPLL  PKPP+ K+T F+  PS  DFHI LNI NPN  
Sbjct: 62  CLRFFLPITALLLVIILLAVLLPPLLASPKPPIVKITTFKLAPSGHDFHIKLNIHNPNSI 121

Query: 123 GFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTK-SSSFPKELERRIKN 182
           G + FKSPSHA LSFRKH++A AKFPLIQQEHGS+ HV L  H K SSSFPKE +RR+++
Sbjct: 122 GSMSFKSPSHAFLSFRKHELATAKFPLIQQEHGSEEHVTLVFHAKSSSSFPKEFKRRMED 181

Query: 183 -KSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
            KSKL  +MSL M+LPA T GRLS  RNV+FVVVCSFTVNTL KNS ILS DC+S+RQ
Sbjct: 182 KKSKLHVAMSLKMNLPAETIGRLSMHRNVEFVVVCSFTVNTLEKNSKILSHDCESKRQ 239

BLAST of CmoCh05G005150 vs. NCBI nr
Match: KAG6598677.1 (NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 462.6 bits (1189), Expect = 2.0e-126
Identity = 235/238 (98.74%), Postives = 236/238 (99.16%), Query Frame = 0

Query: 1   MAEPERIHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRS 60
           MAEPERIHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPS+STSKRRRS
Sbjct: 1   MAEPERIHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSVSTSKRRRS 60

Query: 61  CCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNP 120
           CCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNP
Sbjct: 61  CCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNP 120

Query: 121 SGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK- 180
           SGFIE KSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK 
Sbjct: 121 SGFIELKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIKN 180

Query: 181 NKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
           NKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ
Sbjct: 181 NKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238

BLAST of CmoCh05G005150 vs. NCBI nr
Match: KAG7029623.1 (NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 458.8 bits (1179), Expect = 2.9e-125
Identity = 232/238 (97.48%), Postives = 235/238 (98.74%), Query Frame = 0

Query: 1   MAEPERIHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRS 60
           MAEPERIHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPS+STSKRRRS
Sbjct: 1   MAEPERIHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSVSTSKRRRS 60

Query: 61  CCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNP 120
           CCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNP
Sbjct: 61  CCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNP 120

Query: 121 SGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK- 180
            GFIE KSPSHASL+FRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK 
Sbjct: 121 YGFIELKSPSHASLTFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIKN 180

Query: 181 NKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
           NKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVV+CSFTVNTLGKNSHILSQDCQSERQ
Sbjct: 181 NKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVICSFTVNTLGKNSHILSQDCQSERQ 238

BLAST of CmoCh05G005150 vs. NCBI nr
Match: XP_022997529.1 (NDR1/HIN1-like protein 13 [Cucurbita maxima])

HSP 1 Score: 443.0 bits (1138), Expect = 1.7e-120
Identity = 223/238 (93.70%), Postives = 230/238 (96.64%), Query Frame = 0

Query: 1   MAEPERIHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRS 60
           MAEPER HSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPS+STS RRRS
Sbjct: 1   MAEPERTHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSVSTSNRRRS 60

Query: 61  CCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNP 120
           CCFRIF+PIFIVLLFILILALVLPPLLTPPKPP+FKLTKFRFTPSTR+FHI LNILNPNP
Sbjct: 61  CCFRIFVPIFIVLLFILILALVLPPLLTPPKPPIFKLTKFRFTPSTRNFHIDLNILNPNP 120

Query: 121 SGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK- 180
           SGFIEFKSPSH SL FRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK 
Sbjct: 121 SGFIEFKSPSHVSLFFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIKN 180

Query: 181 NKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
           NKSKLKTSMSLMMDLPAHTKGRLSTRR+VKFVV+CSFTVNT GK+SHILSQDCQ ERQ
Sbjct: 181 NKSKLKTSMSLMMDLPAHTKGRLSTRRDVKFVVICSFTVNTFGKHSHILSQDCQIERQ 238

BLAST of CmoCh05G005150 vs. NCBI nr
Match: XP_038885823.1 (NDR1/HIN1-like protein 13, partial [Benincasa hispida])

HSP 1 Score: 350.9 bits (899), Expect = 8.6e-93
Identity = 185/238 (77.73%), Postives = 200/238 (84.03%), Query Frame = 0

Query: 1   MAEPERIHSNLLPVHPG-FSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRR 60
           MAEPER++S   P  P  FS GTYV+QIPKDQIYRIPPPENA IVE HRNPSI+TS RRR
Sbjct: 16  MAEPERVYSPPPPPDPSLFSAGTYVVQIPKDQIYRIPPPENALIVERHRNPSITTSSRRR 75

Query: 61  SCCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPN 120
           SCC RIFLPIF V + IL+LAL+LPPLLTPPKPPVF L KF+ TPST  FHI L+ILNPN
Sbjct: 76  SCCLRIFLPIFFVFVLILLLALLLPPLLTPPKPPVFDLIKFKLTPSTHKFHINLDILNPN 135

Query: 121 PSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK 180
            +G I FKSPS ASLSFRK K+A AKFPLI+ EHGSQRHVAL+LH K SSFPKEL+RR+K
Sbjct: 136 SAGSISFKSPSRASLSFRKQKLATAKFPLIRTEHGSQRHVALSLHAK-SSFPKELQRRMK 195

Query: 181 NKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
           NKSKL  SMSL MDLPA T  RLSTRR VKFVVVCSFTVNTLGKNS ILSQDCQSERQ
Sbjct: 196 NKSKLHISMSLKMDLPAETTSRLSTRREVKFVVVCSFTVNTLGKNSRILSQDCQSERQ 252

BLAST of CmoCh05G005150 vs. NCBI nr
Match: XP_008445591.1 (PREDICTED: uncharacterized protein LOC103488571 [Cucumis melo] >KAA0064830.1 NDR1/HIN1-like protein 13 [Cucumis melo var. makuwa])

HSP 1 Score: 315.5 bits (807), Expect = 4.0e-82
Identity = 165/226 (73.01%), Postives = 193/226 (85.40%), Query Frame = 0

Query: 13  PVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFRIFLPIFIV 72
           P  P FS GTYV+QIPKDQIYRIPPPENA IV+ HRNPS+ TS RRRSCCFRIFLPIFIV
Sbjct: 16  PDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSRRRSCCFRIFLPIFIV 75

Query: 73  LLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNPSGFIEFKSPSHA 132
           LL I+ILAL++PPL+  PKPPVFKLTKF+ TPSTR+F+I L+ILNPN +G I FKSPS  
Sbjct: 76  LLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILNPNSAGSISFKSPSRV 135

Query: 133 SLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK-NKSKLKTSMSLM 192
           SLSFRK ++A  KFPLI+Q+HGS+++VAL+L  K S+FPKEL+RR+K +K+KL TS+SL 
Sbjct: 136 SLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAK-SAFPKELQRRMKSSKTKLHTSLSLK 195

Query: 193 MDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
           M+L A TKGRLS RRNVKFVV CSFTVNTLGK S ILSQDC+SERQ
Sbjct: 196 MNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

BLAST of CmoCh05G005150 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-13
Identity = 63/240 (26.25%), Postives = 105/240 (43.75%), Query Frame = 0

Query: 9   SNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRS---CCFRI 68
           S   P  P   P TYVIQ+PKDQIYRIPPPENA     HR   +S  K  RS   CCF  
Sbjct: 23  SGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENA-----HRFEQLSRKKTNRSNCRCCFCS 82

Query: 69  FLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRF--------TPSTRDFHIVLNILN 128
           FL    +L+ +  ++  +  L+  P+ P + +  F          +P +  F++ +   N
Sbjct: 83  FLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRN 142

Query: 129 PNPSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERR 188
            N    + ++  S   + +    ++    P+  Q   +   V L L          + + 
Sbjct: 143 GNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKE 202

Query: 189 IKNKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFV--VVCSFTVNTLGKNSHILSQDCQSE 236
           ++N+   KT +   + + A  K +  + +    +  V C  TV+ L   S I+S+ C  +
Sbjct: 203 MRNEVSKKT-VPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHD 256

BLAST of CmoCh05G005150 vs. TAIR 10
Match: AT2G27080.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-13
Identity = 63/240 (26.25%), Postives = 105/240 (43.75%), Query Frame = 0

Query: 9   SNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRS---CCFRI 68
           S   P  P   P TYVIQ+PKDQIYRIPPPENA     HR   +S  K  RS   CCF  
Sbjct: 23  SGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENA-----HRFEQLSRKKTNRSNCRCCFCS 82

Query: 69  FLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRF--------TPSTRDFHIVLNILN 128
           FL    +L+ +  ++  +  L+  P+ P + +  F          +P +  F++ +   N
Sbjct: 83  FLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRN 142

Query: 129 PNPSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERR 188
            N    + ++  S   + +    ++    P+  Q   +   V L L          + + 
Sbjct: 143 GNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKE 202

Query: 189 IKNKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFV--VVCSFTVNTLGKNSHILSQDCQSE 236
           ++N+   KT +   + + A  K +  + +    +  V C  TV+ L   S I+S+ C  +
Sbjct: 203 MRNEVSKKT-VPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHD 256

BLAST of CmoCh05G005150 vs. TAIR 10
Match: AT5G21130.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-12
Identity = 67/233 (28.76%), Postives = 103/233 (44.21%), Query Frame = 0

Query: 17  GFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFRIFLPIFIVLLFI 76
           G  PGTYVI++PKDQIYR+PPPENA     HR   +S  K  +SCC R        LL I
Sbjct: 52  GPPPGTYVIKLPKDQIYRVPPPENA-----HRYEYLSRRKTNKSCCRRCLCYSLSALLII 111

Query: 77  LILALV---LPPLLTPPKPPVFKLTKFRFT--------PSTRDFHIVLNILNPNPSGFIE 136
           ++LA +      L+  P  P F ++    T        P +    I L   N      + 
Sbjct: 112 IVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFSPVIRIKLRSQNVKGKLGLI 171

Query: 137 FKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKS----SSFPKELERRIKNK 196
           ++  + A + F   K+   +F   +Q  G+   +   L   S    SS  KEL    +++
Sbjct: 172 YEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKEL---TESQ 231

Query: 197 SKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQS 235
            K K    L +  P   K    T   +   V C  TV+ L  ++ + +++C++
Sbjct: 232 KKGKVPFGLRIKAPVKFKVGSVTTWTMTITVDCKITVDKLTASATVKTENCET 276

BLAST of CmoCh05G005150 vs. TAIR 10
Match: AT2G22180.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-11
Identity = 61/221 (27.60%), Postives = 103/221 (46.61%), Query Frame = 0

Query: 22  TYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFRIFLPIFIVLL---FILI 81
           TYV+Q+P+DQ+Y  PPPE+A  VE     S +  K ++  C +  L  FI+L+   F+L 
Sbjct: 79  TYVVQVPRDQVYWTPPPEHAKYVE---KRSKNPEKNKKKGCSKRLLWFFIILVIFGFLLG 138

Query: 82  LALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNPSGFIEFKSPSH--ASLSF 141
             +++      P  PVF + +    PS  +F + L   NP  +  + +    +   SL++
Sbjct: 139 AIILILHFAFNPTLPVFAVERLTVNPS--NFEVTLRAENPTSNMGVRYMMEKNGVVSLTY 198

Query: 142 RKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIKNKSKLKTSMSLMMDLPA 201
           +   +   KFP + Q       V + L+  + +   +        SK    + L M+L A
Sbjct: 199 KNKSLGSGKFPGLSQAASGSDKVNVKLNGSTKNAVVQ-----PRGSKQPVVLMLNMELKA 258

Query: 202 HTKGRLSTRRNVKFVVVCSFTVNTL--GKNSHILSQDCQSE 236
             +     +RN + VV C   V  L   K   I+S++C+SE
Sbjct: 259 EYEAG-PVKRNKEVVVTCDVKVKGLLDAKKVEIVSENCESE 288

BLAST of CmoCh05G005150 vs. TAIR 10
Match: AT4G39745.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.2e-06
Identity = 59/248 (23.79%), Postives = 94/248 (37.90%), Query Frame = 0

Query: 4   PERIHSNLLPVHPGFSPG------------TYVIQIPKDQIYRIPPPENAFIVECHRNPS 63
           P+ + +  L + P  SP             TYV+ +P+DQ+Y IPPP+NA          
Sbjct: 52  PQHLRNRSLNLSPHVSPSSPPPPDPIPEIETYVVHVPRDQVYWIPPPDNA---------- 111

Query: 64  ISTSKRRRSCCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHI 123
             +SK                        + +   +  P+PPVF + K      +R F I
Sbjct: 112 -GSSKD---------------------AGIAIRGEIIKPEPPVFNVKKLE---KSRHFEI 171

Query: 124 VLNILNPNPSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSS-- 183
           +L   NP  + ++ +K     SL+++   +    FP +         V L L    ++  
Sbjct: 172 MLTSKNPTSTMWVTYK--GLVSLTYKNKNLGQGNFPELSLAVSGSHTVNLKLDRSMNAAV 231

Query: 184 FPKELERRIKNKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTL--GKNSHI 236
            P E+            S+ L M L A   G    +R  +  V C   VN L       I
Sbjct: 232 LPPEV-----------VSLVLTMGLDAGF-GTGLVKRAKEVAVTCDIKVNGLLDAHKVEI 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9ZVD22.0e-1226.25NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1KBM38.0e-12193.70NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111492422 PE=4 SV=1[more]
A0A5A7VCB91.9e-8273.01NDR1/HIN1-like protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
A0A1S3BD321.9e-8273.01uncharacterized protein LOC103488571 OS=Cucumis melo OX=3656 GN=LOC103488571 PE=... [more]
A0A0A0LK435.6e-8269.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G307330 PE=4 SV=1[more]
A0A6J1GJ426.4e-7866.81NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111454733 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
KAG6598677.12.0e-12698.74NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7029623.12.9e-12597.48NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022997529.11.7e-12093.70NDR1/HIN1-like protein 13 [Cucurbita maxima][more]
XP_038885823.18.6e-9377.73NDR1/HIN1-like protein 13, partial [Benincasa hispida][more]
XP_008445591.14.0e-8273.01PREDICTED: uncharacterized protein LOC103488571 [Cucumis melo] >KAA0064830.1 NDR... [more]
Match NameE-valueIdentityDescription
AT2G27080.11.4e-1326.25Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G27080.21.4e-1326.25Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT5G21130.11.6e-1228.76Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G22180.15.1e-1127.60hydroxyproline-rich glycoprotein family protein [more]
AT4G39745.12.2e-0623.79hydroxyproline-rich glycoprotein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31852:SF159HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEINcoord: 16..235
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 16..235

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G005150.1CmoCh05G005150.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane