CmoCh05G004340 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G004340
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionespin-like
LocationCmo_Chr05: 2031802 .. 2033251 (+)
RNA-Seq ExpressionCmoCh05G004340
SyntenyCmoCh05G004340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTATCCAAAGAGAGTGAGGACGGCCAATTTCCTCCGTGGCCATGGAGCCGTCCGCTCATCGGCGCTAAGTTCGACAACCTCCCAGGAGATTTGGGCCAGAAAGAAGGACACTTTAATGGTGGTGGCATCCCTCATCGCCACCATGGCCTTCCAAGCCGTCGTCAACCCTCCCGGCGGCGTCTGGCAAGAGGATGGTGCCCATATCAACAACAGCTCGGTCACCAGTCATCAAGCTGGAAAATCGGTAATGACACTTACAATTCTGAGTTTTTAAGGAAAAAGTTCGTTGACAATAAGATCCAAACCGTTAAGATGTTTTTCCGACAAAAACTTAGTCATACCAAACATTATCAAACGAACATGGACCGACTACTTAATTTAAAACATAAAAAATGGGTTGGGTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCCCGACTTGTGTTTGGTGGAATTTTTTAAAATCGGACAATTTTTAGTCGATTCGTAGGTCAACCCAACCAACCCGAAAATAGGATTGATACCGAACCCAACCCTACCTTACTTTTAAAATTATTATGAAAATGAAAAATATTTGACATTTGTAACCGATATGACTGATGCGTTGTGAGTTGTGAATATTTAGGTTTGGTTGAAATTTTGGAAAACTAAAAAATTTGAGTTGGTTCGTAGGTCAACATGACCAACCCAACCATCTCGAAAATTCTTTTAAGATTATTATGAAAACTAAGAATATTTGACTCTTGTAACTAATATCGGTGATGGGGTCTGAAATGTTTGATATTTGAGTTTTATTAAATTTAAAAACGTAACATGTATTATGGATAAATAAGATTTTTTTTAAAAAAAAATTTAAAAACAACCCGACAACGGAAATCAACCCACCCCTCTAATTCTCAAGTTCGATTACGTTGTGAATTATATTTGAATTACTGGATCACCGACCCAATCAAGTTAAAATTTGAACAATGAAATGAAATTGGTTTGAGCAGGTAATGGCAGCAAAAAGCCCAAAACTTTACGTGTTCTTCATAACGTTTGCGTCGTGGGCGTTCATATTCTCGCTAATGGAGTTGCTCCTGCACGTCAGCAACCGCGTCTCCAACAGCGGCATGGTTTCTGAGGCCTTGATTGTTTACGCTAAGTACATGTCCACCCTCTCCCTCGTCGCCACTTATTCGATATCCGCGGCGTTTTTGACCGCCTTGTCTGGCCAAGATGCTGCCGGCTTCACCTTCTTGATATCCATCACCGCCATCTTCGTCCTCCTCTATTTGTTCTTTGTTTTGAGATATGGCTTCCGTAAAAGGCCTTCTCCTTTGAAAAAGCCCATTACTTTTCCTCCCCCTATTCCTCCACAATCATAG

mRNA sequence

ATGGTGTATCCAAAGAGAGTGAGGACGGCCAATTTCCTCCGTGGCCATGGAGCCGTCCGCTCATCGGCGCTAAGTTCGACAACCTCCCAGGAGATTTGGGCCAGAAAGAAGGACACTTTAATGGTGGTGGCATCCCTCATCGCCACCATGGCCTTCCAAGCCGTCGTCAACCCTCCCGGCGGCGTCTGGCAAGAGGATGGTGCCCATATCAACAACAGCTCGGTCACCAGTCATCAAGCTGGAAAATCGGTAATGGCAGCAAAAAGCCCAAAACTTTACGTGTTCTTCATAACGTTTGCGTCGTGGGCGTTCATATTCTCGCTAATGGAGTTGCTCCTGCACGTCAGCAACCGCGTCTCCAACAGCGGCATGGTTTCTGAGGCCTTGATTGTTTACGCTAAGTACATGTCCACCCTCTCCCTCGTCGCCACTTATTCGATATCCGCGGCGTTTTTGACCGCCTTGTCTGGCCAAGATGCTGCCGGCTTCACCTTCTTGATATCCATCACCGCCATCTTCGTCCTCCTCTATTTGTTCTTTGTTTTGAGATATGGCTTCCGTAAAAGGCCTTCTCCTTTGAAAAAGCCCATTACTTTTCCTCCCCCTATTCCTCCACAATCATAG

Coding sequence (CDS)

ATGGTGTATCCAAAGAGAGTGAGGACGGCCAATTTCCTCCGTGGCCATGGAGCCGTCCGCTCATCGGCGCTAAGTTCGACAACCTCCCAGGAGATTTGGGCCAGAAAGAAGGACACTTTAATGGTGGTGGCATCCCTCATCGCCACCATGGCCTTCCAAGCCGTCGTCAACCCTCCCGGCGGCGTCTGGCAAGAGGATGGTGCCCATATCAACAACAGCTCGGTCACCAGTCATCAAGCTGGAAAATCGGTAATGGCAGCAAAAAGCCCAAAACTTTACGTGTTCTTCATAACGTTTGCGTCGTGGGCGTTCATATTCTCGCTAATGGAGTTGCTCCTGCACGTCAGCAACCGCGTCTCCAACAGCGGCATGGTTTCTGAGGCCTTGATTGTTTACGCTAAGTACATGTCCACCCTCTCCCTCGTCGCCACTTATTCGATATCCGCGGCGTTTTTGACCGCCTTGTCTGGCCAAGATGCTGCCGGCTTCACCTTCTTGATATCCATCACCGCCATCTTCGTCCTCCTCTATTTGTTCTTTGTTTTGAGATATGGCTTCCGTAAAAGGCCTTCTCCTTTGAAAAAGCCCATTACTTTTCCTCCCCCTATTCCTCCACAATCATAG

Protein sequence

MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPGGVWQEDGAHINNSSVTSHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRVSNSGMVSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYLFFVLRYGFRKRPSPLKKPITFPPPIPPQS
Homology
BLAST of CmoCh05G004340 vs. ExPASy TrEMBL
Match: A0A6J1HDN6 (espin-like OS=Cucurbita moschata OX=3662 GN=LOC111462984 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.8e-101
Identity = 202/203 (99.51%), Postives = 203/203 (100.00%), Query Frame = 0

Query: 5   KRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPGGVWQ 64
           +RVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPGGVWQ
Sbjct: 168 ERVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPGGVWQ 227

Query: 65  EDGAHINNSSVTSHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRVSNSGM 124
           EDGAHINNSSVTSHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRVSNSGM
Sbjct: 228 EDGAHINNSSVTSHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRVSNSGM 287

Query: 125 VSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYLFFVLRY 184
           VSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYLFFVLRY
Sbjct: 288 VSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYLFFVLRY 347

Query: 185 GFRKRPSPLKKPITFPPPIPPQS 208
           GFRKRPSPLKKPITFPPPIPPQS
Sbjct: 348 GFRKRPSPLKKPITFPPPIPPQS 370

BLAST of CmoCh05G004340 vs. ExPASy TrEMBL
Match: A0A6J1K9X3 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC111492423 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.9e-95
Identity = 194/204 (95.10%), Postives = 197/204 (96.57%), Query Frame = 0

Query: 1   MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPG 60
           MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPG
Sbjct: 203 MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPG 262

Query: 61  GVWQEDGAHINNSSV-TSHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRV 120
           GVWQEDGAHINNSSV +S QAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRV
Sbjct: 263 GVWQEDGAHINNSSVISSPQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRV 322

Query: 121 SNSGMVSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYLF 180
           SNSG+VSEALIVYAKYMST SLVATYSISAAFLTALSGQDAAGF FLISITAIFVLLYLF
Sbjct: 323 SNSGVVSEALIVYAKYMSTFSLVATYSISAAFLTALSGQDAAGFAFLISITAIFVLLYLF 382

Query: 181 FVLRYGFRKRPSPLKKPITFPPPI 204
           F LRYGFR+R SPLKK ITFPPPI
Sbjct: 383 FALRYGFRRRSSPLKKSITFPPPI 406

BLAST of CmoCh05G004340 vs. ExPASy TrEMBL
Match: A0A6J1BQ97 (ankyrin-3-like OS=Momordica charantia OX=3673 GN=LOC111004773 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 6.3e-45
Identity = 113/203 (55.67%), Postives = 144/203 (70.94%), Query Frame = 0

Query: 3   YPKRVRTANFLRGHGAVRSSAL-SSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPGG 62
           YP  ++T NFLRG+GA  SSAL +S TS E+WARKKD LMVVASLIATMAFQA VNPPGG
Sbjct: 203 YPNLLKTTNFLRGYGATSSSALTASATSPELWARKKDALMVVASLIATMAFQAAVNPPGG 262

Query: 63  VWQEDGAHINNSSVTSHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRVSN 122
           VWQ+DG        +  +AGKSVMA+KSP LY  FI  A+ AF FSL+EL LH+SN VSN
Sbjct: 263 VWQDDGN-------SGQRAGKSVMASKSPDLYTLFIVSATSAFAFSLVELTLHMSNTVSN 322

Query: 123 SGMVSEALIVYAKYMSTLSLVATYSISAAFLTALSGQD--AAGFTFLISITAIFVLLYLF 182
           S + +  L+ YAKY+ST++LVA YS+S AFLT L   +  A GF  ++ +T + +L+++ 
Sbjct: 323 S-VAAVGLVAYAKYISTVALVAAYSLSVAFLTMLPEDEKTATGFRTMLCMTVVVILVFVV 382

Query: 183 FVLRYGFRKRPSPLKKPITFPPP 203
             LR+GF ++  P    I FPPP
Sbjct: 383 AALRFGFARKGHP-ASVIQFPPP 396

BLAST of CmoCh05G004340 vs. ExPASy TrEMBL
Match: A0A2G2WHJ5 (ANK_REP_REGION domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_13850 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.7e-13
Identity = 59/148 (39.86%), Postives = 87/148 (58.78%), Query Frame = 0

Query: 34  ARKKDTLMVVASLIATMAFQAVVNPPGGVWQEDGAHINNSSVTSHQAGKSVMAAKSPKLY 93
           ++K++T+MVVASLIATMAFQA VNPPGGVWQE+G  +N+  + SH+AG++VMA    + Y
Sbjct: 291 SKKRETIMVVASLIATMAFQAGVNPPGGVWQENG-ELNSQGIPSHKAGEAVMAYNHARSY 350

Query: 94  VFFITFASWAFIFSLMELLLHVSNRVSNSGMVSEALIVYAKYMSTLSLVATYSISAAFLT 153
            +F+   + AF+ SL  +LL +S       +    L+V   +++  S+  TY IS   LT
Sbjct: 351 RYFLRANTIAFVSSLSTILLLISGLPFRRRLFMWGLMV-IMWLTVTSVALTYGISIYILT 410

Query: 154 ALSGQDAAGFTFLISITAIFVLLYLFFV 182
                +  G    I IT    L+ L  +
Sbjct: 411 PKKDSEPLGQIIEIGITVWCGLMALLLL 436

BLAST of CmoCh05G004340 vs. ExPASy TrEMBL
Match: A0A3Q7HQ13 (ANK_REP_REGION domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101247945 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-13
Identity = 62/156 (39.74%), Postives = 91/156 (58.33%), Query Frame = 0

Query: 34  ARKKDTLMVVASLIATMAFQAVVNPPGGVWQED---GAHINNSSVTSHQAGKSVMAAKSP 93
           +RK+DT+MVVASLIATMAFQA +NPPGGVWQE+    +H+N   +  H+AG++VMA   P
Sbjct: 277 SRKRDTIMVVASLIATMAFQAGMNPPGGVWQENKELNSHVNPLQI-PHKAGEAVMAYTHP 336

Query: 94  KLYVFFITFASWAFIFSLMELLLHVSNRVSNSGMVSEALIVYAKYMSTLSLVATYSISAA 153
           K Y +FI   + AF+ SL  +LL +S           AL+V   +++  S+  TY IS  
Sbjct: 337 KSYRYFIRVNTTAFVASLSTILLLISGLPFRKKFFMWALMV-IMWLTITSIALTYGISIY 396

Query: 154 FLTALSGQDAAGFTFLISIT---AIFVLLYLFFVLR 184
            +T    ++  G    +++T    +  LL L   +R
Sbjct: 397 IVTPKKDREQLGQVIEVAVTVWSCVMTLLLLGNTIR 430

BLAST of CmoCh05G004340 vs. NCBI nr
Match: KAG6598605.1 (Ankyrin-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378.6 bits (971), Expect = 3.4e-101
Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 0

Query: 1   MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPG 60
           MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPG
Sbjct: 203 MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPG 262

Query: 61  GVWQEDGAHINNSSV-TSHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRV 120
           GVWQEDGAHINNSSV +SHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRV
Sbjct: 263 GVWQEDGAHINNSSVISSHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRV 322

Query: 121 SNSGMVSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYLF 180
           SNSGMVSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYLF
Sbjct: 323 SNSGMVSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYLF 382

Query: 181 FVLRYGFRKRPSPLKKPITFPPPIPPQS 208
           FV RYG RKRPSPLKKPITFPPPIPPQS
Sbjct: 383 FVFRYGLRKRPSPLKKPITFPPPIPPQS 410

BLAST of CmoCh05G004340 vs. NCBI nr
Match: XP_022962581.1 (espin-like [Cucurbita moschata])

HSP 1 Score: 377.9 bits (969), Expect = 5.7e-101
Identity = 202/203 (99.51%), Postives = 203/203 (100.00%), Query Frame = 0

Query: 5   KRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPGGVWQ 64
           +RVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPGGVWQ
Sbjct: 168 ERVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPGGVWQ 227

Query: 65  EDGAHINNSSVTSHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRVSNSGM 124
           EDGAHINNSSVTSHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRVSNSGM
Sbjct: 228 EDGAHINNSSVTSHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRVSNSGM 287

Query: 125 VSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYLFFVLRY 184
           VSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYLFFVLRY
Sbjct: 288 VSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYLFFVLRY 347

Query: 185 GFRKRPSPLKKPITFPPPIPPQS 208
           GFRKRPSPLKKPITFPPPIPPQS
Sbjct: 348 GFRKRPSPLKKPITFPPPIPPQS 370

BLAST of CmoCh05G004340 vs. NCBI nr
Match: XP_023546358.1 (ankyrin repeat-containing protein At5g02620-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.2 bits (957), Expect = 1.4e-99
Identity = 201/209 (96.17%), Postives = 204/209 (97.61%), Query Frame = 0

Query: 1   MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPG 60
           MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAV+NPPG
Sbjct: 203 MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVINPPG 262

Query: 61  GVWQEDGAHINNSSVTS--HQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNR 120
           GVWQEDGAHINNSSV S    AGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNR
Sbjct: 263 GVWQEDGAHINNSSVVSSPQVAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNR 322

Query: 121 VSNSGMVSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYL 180
           VSNSGMVSEALIVYAKYMSTLSL+ATYSISAAFLTALSGQDAAGFTFL+SITAIFVLLYL
Sbjct: 323 VSNSGMVSEALIVYAKYMSTLSLLATYSISAAFLTALSGQDAAGFTFLMSITAIFVLLYL 382

Query: 181 FFVLRYGFRKRPSPLKKPITFPPPIPPQS 208
           FFVLRYGFRKRPSPLKKPITFPPPIPPQS
Sbjct: 383 FFVLRYGFRKRPSPLKKPITFPPPIPPQS 411

BLAST of CmoCh05G004340 vs. NCBI nr
Match: XP_022997530.1 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Cucurbita maxima])

HSP 1 Score: 357.5 bits (916), Expect = 8.0e-95
Identity = 194/204 (95.10%), Postives = 197/204 (96.57%), Query Frame = 0

Query: 1   MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPG 60
           MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPG
Sbjct: 203 MVYPKRVRTANFLRGHGAVRSSALSSTTSQEIWARKKDTLMVVASLIATMAFQAVVNPPG 262

Query: 61  GVWQEDGAHINNSSV-TSHQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRV 120
           GVWQEDGAHINNSSV +S QAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRV
Sbjct: 263 GVWQEDGAHINNSSVISSPQAGKSVMAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRV 322

Query: 121 SNSGMVSEALIVYAKYMSTLSLVATYSISAAFLTALSGQDAAGFTFLISITAIFVLLYLF 180
           SNSG+VSEALIVYAKYMST SLVATYSISAAFLTALSGQDAAGF FLISITAIFVLLYLF
Sbjct: 323 SNSGVVSEALIVYAKYMSTFSLVATYSISAAFLTALSGQDAAGFAFLISITAIFVLLYLF 382

Query: 181 FVLRYGFRKRPSPLKKPITFPPPI 204
           F LRYGFR+R SPLKK ITFPPPI
Sbjct: 383 FALRYGFRRRSSPLKKSITFPPPI 406

BLAST of CmoCh05G004340 vs. NCBI nr
Match: KAG6571767.1 (hypothetical protein SDJN03_28495, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 222.2 bits (565), Expect = 4.0e-54
Identity = 121/123 (98.37%), Postives = 121/123 (98.37%), Query Frame = 0

Query: 85  MAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRVSNSGMVSEALIVYAKYMSTLSLVAT 144
           MAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRVSNSGMVSEALIVYAKYMSTLSLVAT
Sbjct: 1   MAAKSPKLYVFFITFASWAFIFSLMELLLHVSNRVSNSGMVSEALIVYAKYMSTLSLVAT 60

Query: 145 YSISAAFLTALSGQDAAGFTFLISITAIFVLLYLFFVLRYGFRKRPSPLKKPITFPPPIP 204
           YSISAAFLTALSGQDAAGFTFLISITAIFVLLYLFFV RYG RKRPSPLKKPITFPPPIP
Sbjct: 61  YSISAAFLTALSGQDAAGFTFLISITAIFVLLYLFFVFRYGLRKRPSPLKKPITFPPPIP 120

Query: 205 PQS 208
           PQS
Sbjct: 121 PQS 123

BLAST of CmoCh05G004340 vs. TAIR 10
Match: AT3G13950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13266.1); Has 339 Blast hits to 265 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-08
Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 0

Query: 33  WARK-KDTLMVVASLIATMAFQAVVNPPGGVWQEDGAHINNSSVTS----HQAGKSVMAA 92
           W  K +  LMV A++IA M+FQ +VNPPGGVWQ D     N + T+     +AG +V+  
Sbjct: 29  WLEKTRGNLMVTATVIAGMSFQVMVNPPGGVWQSDNCSFGNQTGTAPFCKGRAGTAVLEY 88

Query: 93  KSPK--LYVFFITFASWAFIFSLMELLLHVSNRVSNSGMVSEALIVYAKYMSTLSLVATY 152
           +S K   Y+  I  ++ +F  S+  +LL +S     + M+   L        T  +VA  
Sbjct: 89  ESSKRIAYIGMIISSTVSFSTSMSLILLVISGIRLRNRMIMAIL-------GTFMVVAVL 148

Query: 153 SISAAFLTAL 156
            ISAAF  A+
Sbjct: 149 CISAAFFFAI 151

BLAST of CmoCh05G004340 vs. TAIR 10
Match: AT5G51160.1 (Ankyrin repeat family protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-07
Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 0

Query: 37  KDTLMVVASLIATMAFQAVVNPPGGVWQEDG--------AHINNSSVTSHQAGKSVMAAK 96
           +  L+VVASL+AT  FQA + PPGG WQ+           ++N ++  +H AG+S+M   
Sbjct: 271 RSALLVVASLVATATFQASLTPPGGTWQDSSIPAVSQNTTNVNTTNQQAHTAGQSIMGTF 330

Query: 97  SPKLYVFFITFASWAFIFSLMEL 112
           +   +  F+ F +  F  SL  L
Sbjct: 331 NGVAFTLFVFFNTIGFSVSLSML 353

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HDN62.8e-10199.51espin-like OS=Cucurbita moschata OX=3662 GN=LOC111462984 PE=4 SV=1[more]
A0A6J1K9X33.9e-9595.10serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like ... [more]
A0A6J1BQ976.3e-4555.67ankyrin-3-like OS=Momordica charantia OX=3673 GN=LOC111004773 PE=4 SV=1[more]
A0A2G2WHJ51.7e-1339.86ANK_REP_REGION domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_... [more]
A0A3Q7HQ132.2e-1339.74ANK_REP_REGION domain-containing protein OS=Solanum lycopersicum OX=4081 GN=1012... [more]
Match NameE-valueIdentityDescription
KAG6598605.13.4e-10198.08Ankyrin-3, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022962581.15.7e-10199.51espin-like [Cucurbita moschata][more]
XP_023546358.11.4e-9996.17ankyrin repeat-containing protein At5g02620-like [Cucurbita pepo subsp. pepo][more]
XP_022997530.18.0e-9595.10serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like ... [more]
KAG6571767.14.0e-5498.37hypothetical protein SDJN03_28495, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT3G13950.13.6e-0835.38unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G51160.13.9e-0734.94Ankyrin repeat family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026961PGG domainPFAMPF13962PGGcoord: 34..155
e-value: 2.7E-21
score: 75.5
NoneNo IPR availablePANTHERPTHR24128HOMEOBOX PROTEIN WARIAIcoord: 24..176
NoneNo IPR availablePANTHERPTHR24128:SF61ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKEcoord: 24..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G004340.1CmoCh05G004340.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane