Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAGCACGGCCATACAAATGGAGCTTGGAAATGAAAACAATAAAGAAGATGAGAAGAAGAAGAAGAAGAACACCACCGGGGAAAGGGATTTTCTAATGGTAGCAACAACGTTCATTGCAGCCATGGCTTTCCAAGCTGGGACCAACCCTCCCGGCGGCGTCTGGCAAGAAGACAAACCCAAAGAGTTAGAAGCAGGCAAATCCATCATGGCTACAAAATCCCCCTCTCAATTCCTCAATTTCATGAGCGGCATGACCGTGTGTTTTGCATGTTCAGTGCTGCAGCTCATGGTGTTGCTCATGAAGTCCCATGAACGTTTGACGGTTTGGACGAGCTTCATGTACTTCACGATGGGAACCGCGATAGCATCCATGGTTGTGGCTTATTGGTCCTCTGTAAAAGCTTTGACACCCGACACGCAGATGTCCAGTATCATCGTTATGCTCTCTGTTTCTCTTGGATTCTCCGTTGTGGGACTCCCACTTGCATTGTATATTGTACGGAAGAGAGTTTCATCTTAA
mRNA sequence
ATGTCGAGCACGGCCATACAAATGGAGCTTGGAAATGAAAACAATAAAGAAGATGAGAAGAAGAAGAAGAAGAACACCACCGGGGAAAGGGATTTTCTAATGGTAGCAACAACGTTCATTGCAGCCATGGCTTTCCAAGCTGGGACCAACCCTCCCGGCGGCGTCTGGCAAGAAGACAAACCCAAAGAGTTAGAAGCAGGCAAATCCATCATGGCTACAAAATCCCCCTCTCAATTCCTCAATTTCATGAGCGGCATGACCGTGTGTTTTGCATGTTCAGTGCTGCAGCTCATGGTGTTGCTCATGAAGTCCCATGAACGTTTGACGGTTTGGACGAGCTTCATGTACTTCACGATGGGAACCGCGATAGCATCCATGGTTGTGGCTTATTGGTCCTCTGTAAAAGCTTTGACACCCGACACGCAGATGTCCAGTATCATCGTTATGCTCTCTGTTTCTCTTGGATTCTCCGTTGTGGGACTCCCACTTGCATTGTATATTGTACGGAAGAGAGTTTCATCTTAA
Coding sequence (CDS)
ATGTCGAGCACGGCCATACAAATGGAGCTTGGAAATGAAAACAATAAAGAAGATGAGAAGAAGAAGAAGAAGAACACCACCGGGGAAAGGGATTTTCTAATGGTAGCAACAACGTTCATTGCAGCCATGGCTTTCCAAGCTGGGACCAACCCTCCCGGCGGCGTCTGGCAAGAAGACAAACCCAAAGAGTTAGAAGCAGGCAAATCCATCATGGCTACAAAATCCCCCTCTCAATTCCTCAATTTCATGAGCGGCATGACCGTGTGTTTTGCATGTTCAGTGCTGCAGCTCATGGTGTTGCTCATGAAGTCCCATGAACGTTTGACGGTTTGGACGAGCTTCATGTACTTCACGATGGGAACCGCGATAGCATCCATGGTTGTGGCTTATTGGTCCTCTGTAAAAGCTTTGACACCCGACACGCAGATGTCCAGTATCATCGTTATGCTCTCTGTTTCTCTTGGATTCTCCGTTGTGGGACTCCCACTTGCATTGTATATTGTACGGAAGAGAGTTTCATCTTAA
Protein sequence
MSSTAIQMELGNENNKEDEKKKKKNTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHERLTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYIVRKRVSS
Homology
BLAST of CmoCh05G004330 vs. ExPASy TrEMBL
Match:
A0A1S4DVA8 (uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=4 SV=1)
HSP 1 Score: 199.1 bits (505), Expect = 1.5e-47
Identity = 108/166 (65.06%), Postives = 136/166 (81.93%), Query Frame = 0
Query: 12 NENNKEDEKKKKK--NTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKS 71
NE +KE++KKKKK +RDFLMVATTFIAAMAFQAGTNPPGGVWQ+D EAGKS
Sbjct: 20 NEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNSPNYEAGKS 79
Query: 72 IMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHER-LTVWTSFMYFTMGTAIASMVV 131
IMATKSPS F++FMSG+TVCFACS +Q +VLL KS E+ +V SF+YFTMG+ I+++VV
Sbjct: 80 IMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKSSEKSWSVSKSFIYFTMGSGISAIVV 139
Query: 132 AYWSSVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYIVRKRVSS 175
AYWS++KALTP+ QMS +IVML +L SVV LP+++YI +KR++S
Sbjct: 140 AYWSAIKALTPEAQMSHVIVMLKTTLVLSVVVLPISMYIEKKRLAS 185
BLAST of CmoCh05G004330 vs. ExPASy TrEMBL
Match:
A0A5D3BRK9 (Ankyrin repeat-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00290 PE=4 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 2.5e-42
Identity = 95/142 (66.90%), Postives = 119/142 (83.80%), Query Frame = 0
Query: 34 MVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACS 93
MVATTFIAAMAFQAGTNPPGGVWQ+D EAGKSIMATKSPS F++FMSG+TVCFACS
Sbjct: 1 MVATTFIAAMAFQAGTNPPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACS 60
Query: 94 VLQLMVLLMKSHER-LTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSV 153
+Q +VLL KS E+ +V SF+YFTMG+ I+++VVAYWS++KALTP+ QMS +IVML
Sbjct: 61 AMQFIVLLGKSSEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKT 120
Query: 154 SLGFSVVGLPLALYIVRKRVSS 175
+L SVV LP+++YI +KR++S
Sbjct: 121 TLVLSVVVLPISMYIEKKRLAS 142
BLAST of CmoCh05G004330 vs. ExPASy TrEMBL
Match:
A0A0A0KIL3 (PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363520 PE=4 SV=1)
HSP 1 Score: 125.6 bits (314), Expect = 2.1e-25
Identity = 78/172 (45.35%), Postives = 112/172 (65.12%), Query Frame = 0
Query: 3 STAIQMELGNENNKE-DEKKKKKNTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKP 62
+T + ++ +EN K+ +EK G+ DF+MV TFIAA+AFQ G NPPG VWQEDK
Sbjct: 11 ATVVSIDTASENKKDREEKNSGWMKPGDVDFVMVVVTFIAAVAFQVGINPPGSVWQEDK- 70
Query: 63 KELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSH-ERLTVWTSFMYFTMG 122
AGKSIMA+KSPS++ FM+G+T+C S++QL V+L + + + +V MY M
Sbjct: 71 NGFTAGKSIMASKSPSEYKKFMAGVTLCLGFSLIQLCVMLFRWYLKSYSVRRMIMYILML 130
Query: 123 TAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVR 170
IA M+V++W+SVKALTPD + MS I + LG ++ LP+ L Y+V+
Sbjct: 131 CTIAPMIVSFWASVKALTPDEKLMSEITATIWSILGVYLISLPIILLYYLVK 181
BLAST of CmoCh05G004330 vs. ExPASy TrEMBL
Match:
A0A1S3BCY4 (uncharacterized protein LOC103488512 OS=Cucumis melo OX=3656 GN=LOC103488512 PE=4 SV=1)
HSP 1 Score: 124.0 bits (310), Expect = 6.1e-25
Identity = 77/173 (44.51%), Postives = 112/173 (64.74%), Query Frame = 0
Query: 3 STAIQMELGNENNKEDEKKKKK-NTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKP 62
+T + ++ EN K+ E+ G+ DF+M+ TFIAA+AFQ GTNPPG VWQEDK
Sbjct: 11 ATVVAIDTETENRKDGEEMNSGWMRPGDVDFVMIVVTFIAAVAFQVGTNPPGSVWQEDK- 70
Query: 63 KELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSH-ERLTVWTSFMYFTMG 122
AGKSIMA+KSPS++ FM+G+T+C + S++QL V+L + + + +V MY M
Sbjct: 71 NGFTAGKSIMASKSPSEYKKFMAGVTLCLSFSLIQLSVMLFRWYLKTYSVRRMIMYLLMI 130
Query: 123 TAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVRK 171
IA M+ ++W+SVKALTPD + MS I + S G ++ LPL L Y+++K
Sbjct: 131 CTIAPMIFSFWASVKALTPDEKIMSEITATIWSSFGVYLMSLPLILLYYLLKK 182
BLAST of CmoCh05G004330 vs. ExPASy TrEMBL
Match:
A0A0A0KGU1 (PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363530 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 2.2e-22
Identity = 76/173 (43.93%), Postives = 105/173 (60.69%), Query Frame = 0
Query: 3 STAIQMELGNENNKEDEKKKKKNT--TGERDFLMVATTFIAAMAFQAGTNPPGGVWQE-D 62
S AI ++ ++ E K N + DFLMV TTFIA +AFQ GTNPPGGVWQE D
Sbjct: 11 SVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDD 70
Query: 63 KPKELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHERLTVWTSF----M 122
K + AGKSIMATKSPS F+ F+ +T CF S +Q VL +K SF +
Sbjct: 71 KQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFSRFIL 130
Query: 123 YFTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSVS-LGFSVVGLPLALYI 168
Y TMG A++SM AY SV+A TPD++ +++ V+ ++ LGF + +++Y+
Sbjct: 131 YSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAISIYL 183
BLAST of CmoCh05G004330 vs. NCBI nr
Match:
XP_016899921.1 (PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo])
HSP 1 Score: 199.1 bits (505), Expect = 3.1e-47
Identity = 108/166 (65.06%), Postives = 136/166 (81.93%), Query Frame = 0
Query: 12 NENNKEDEKKKKK--NTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKS 71
NE +KE++KKKKK +RDFLMVATTFIAAMAFQAGTNPPGGVWQ+D EAGKS
Sbjct: 20 NEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNSPNYEAGKS 79
Query: 72 IMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSHER-LTVWTSFMYFTMGTAIASMVV 131
IMATKSPS F++FMSG+TVCFACS +Q +VLL KS E+ +V SF+YFTMG+ I+++VV
Sbjct: 80 IMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKSSEKSWSVSKSFIYFTMGSGISAIVV 139
Query: 132 AYWSSVKALTPDTQMSSIIVMLSVSLGFSVVGLPLALYIVRKRVSS 175
AYWS++KALTP+ QMS +IVML +L SVV LP+++YI +KR++S
Sbjct: 140 AYWSAIKALTPEAQMSHVIVMLKTTLVLSVVVLPISMYIEKKRLAS 185
BLAST of CmoCh05G004330 vs. NCBI nr
Match:
KAA0064719.1 (ankyrin repeat-containing protein-like [Cucumis melo var. makuwa] >TYK00739.1 ankyrin repeat-containing protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 181.8 bits (460), Expect = 5.1e-42
Identity = 95/142 (66.90%), Postives = 119/142 (83.80%), Query Frame = 0
Query: 34 MVATTFIAAMAFQAGTNPPGGVWQEDKPKELEAGKSIMATKSPSQFLNFMSGMTVCFACS 93
MVATTFIAAMAFQAGTNPPGGVWQ+D EAGKSIMATKSPS F++FMSG+TVCFACS
Sbjct: 1 MVATTFIAAMAFQAGTNPPGGVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACS 60
Query: 94 VLQLMVLLMKSHER-LTVWTSFMYFTMGTAIASMVVAYWSSVKALTPDTQMSSIIVMLSV 153
+Q +VLL KS E+ +V SF+YFTMG+ I+++VVAYWS++KALTP+ QMS +IVML
Sbjct: 61 AMQFIVLLGKSSEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHVIVMLKT 120
Query: 154 SLGFSVVGLPLALYIVRKRVSS 175
+L SVV LP+++YI +KR++S
Sbjct: 121 TLVLSVVVLPISMYIEKKRLAS 142
BLAST of CmoCh05G004330 vs. NCBI nr
Match:
XP_004144204.1 (uncharacterized protein LOC101208403 [Cucumis sativus])
HSP 1 Score: 125.6 bits (314), Expect = 4.3e-25
Identity = 78/172 (45.35%), Postives = 112/172 (65.12%), Query Frame = 0
Query: 3 STAIQMELGNENNKE-DEKKKKKNTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKP 62
+T + ++ +EN K+ +EK G+ DF+MV TFIAA+AFQ G NPPG VWQEDK
Sbjct: 11 ATVVSIDTASENKKDREEKNSGWMKPGDVDFVMVVVTFIAAVAFQVGINPPGSVWQEDK- 70
Query: 63 KELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSH-ERLTVWTSFMYFTMG 122
AGKSIMA+KSPS++ FM+G+T+C S++QL V+L + + + +V MY M
Sbjct: 71 NGFTAGKSIMASKSPSEYKKFMAGVTLCLGFSLIQLCVMLFRWYLKSYSVRRMIMYILML 130
Query: 123 TAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVR 170
IA M+V++W+SVKALTPD + MS I + LG ++ LP+ L Y+V+
Sbjct: 131 CTIAPMIVSFWASVKALTPDEKLMSEITATIWSILGVYLISLPIILLYYLVK 181
BLAST of CmoCh05G004330 vs. NCBI nr
Match:
KAE8647228.1 (hypothetical protein Csa_018955 [Cucumis sativus])
HSP 1 Score: 125.6 bits (314), Expect = 4.3e-25
Identity = 78/172 (45.35%), Postives = 112/172 (65.12%), Query Frame = 0
Query: 3 STAIQMELGNENNKE-DEKKKKKNTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKP 62
+T + ++ +EN K+ +EK G+ DF+MV TFIAA+AFQ G NPPG VWQEDK
Sbjct: 197 ATVVSIDTASENKKDREEKNSGWMKPGDVDFVMVVVTFIAAVAFQVGINPPGSVWQEDK- 256
Query: 63 KELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSH-ERLTVWTSFMYFTMG 122
AGKSIMA+KSPS++ FM+G+T+C S++QL V+L + + + +V MY M
Sbjct: 257 NGFTAGKSIMASKSPSEYKKFMAGVTLCLGFSLIQLCVMLFRWYLKSYSVRRMIMYILML 316
Query: 123 TAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVR 170
IA M+V++W+SVKALTPD + MS I + LG ++ LP+ L Y+V+
Sbjct: 317 CTIAPMIVSFWASVKALTPDEKLMSEITATIWSILGVYLISLPIILLYYLVK 367
BLAST of CmoCh05G004330 vs. NCBI nr
Match:
XP_008445521.1 (PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo])
HSP 1 Score: 124.0 bits (310), Expect = 1.3e-24
Identity = 77/173 (44.51%), Postives = 112/173 (64.74%), Query Frame = 0
Query: 3 STAIQMELGNENNKEDEKKKKK-NTTGERDFLMVATTFIAAMAFQAGTNPPGGVWQEDKP 62
+T + ++ EN K+ E+ G+ DF+M+ TFIAA+AFQ GTNPPG VWQEDK
Sbjct: 11 ATVVAIDTETENRKDGEEMNSGWMRPGDVDFVMIVVTFIAAVAFQVGTNPPGSVWQEDK- 70
Query: 63 KELEAGKSIMATKSPSQFLNFMSGMTVCFACSVLQLMVLLMKSH-ERLTVWTSFMYFTMG 122
AGKSIMA+KSPS++ FM+G+T+C + S++QL V+L + + + +V MY M
Sbjct: 71 NGFTAGKSIMASKSPSEYKKFMAGVTLCLSFSLIQLSVMLFRWYLKTYSVRRMIMYLLMI 130
Query: 123 TAIASMVVAYWSSVKALTPDTQ-MSSIIVMLSVSLGFSVVGLPLAL--YIVRK 171
IA M+ ++W+SVKALTPD + MS I + S G ++ LPL L Y+++K
Sbjct: 131 CTIAPMIFSFWASVKALTPDEKIMSEITATIWSSFGVYLMSLPLILLYYLLKK 182
BLAST of CmoCh05G004330 vs. TAIR 10
Match:
AT3G13950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13266.1); Has 339 Blast hits to 265 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 42.4 bits (98), Expect = 4.5e-04
Identity = 41/151 (27.15%), Postives = 72/151 (47.68%), Query Frame = 0
Query: 30 RDFLMVATTFIAAMAFQAGTNPPGGVWQEDKPK-----------ELEAGKSIMATKSPSQ 89
R LMV T IA M+FQ NPPGGVWQ D + AG +++ +S +
Sbjct: 34 RGNLMVTATVIAGMSFQVMVNPPGGVWQSDNCSFGNQTGTAPFCKGRAGTAVLEYESSKR 93
Query: 90 --FLNFMSGMTVCFACSVLQLMVLLMKSHERLTVWTSFMYFTMGTAIASMVVAYWSSVKA 149
++ + TV F+ S+ +++++ R + + + M A+ + A++ ++
Sbjct: 94 IAYIGMIISSTVSFSTSMSLILLVISGIRLRNRMIMAILGTFMVVAVLCISAAFFFAIVL 153
Query: 150 LTPDTQMSSIIVMLSVSLGFSVVGLPLALYI 168
+ D Q+ I+++ V GF VV L L I
Sbjct: 154 VQSDDQIIRYILLIYV--GFWVVFPVLILLI 182
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S4DVA8 | 1.5e-47 | 65.06 | uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=... | [more] |
A0A5D3BRK9 | 2.5e-42 | 66.90 | Ankyrin repeat-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A0A0KIL3 | 2.1e-25 | 45.35 | PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363520 PE=4 SV... | [more] |
A0A1S3BCY4 | 6.1e-25 | 44.51 | uncharacterized protein LOC103488512 OS=Cucumis melo OX=3656 GN=LOC103488512 PE=... | [more] |
A0A0A0KGU1 | 2.2e-22 | 43.93 | PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363530 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
XP_016899921.1 | 3.1e-47 | 65.06 | PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo] | [more] |
KAA0064719.1 | 5.1e-42 | 66.90 | ankyrin repeat-containing protein-like [Cucumis melo var. makuwa] >TYK00739.1 an... | [more] |
XP_004144204.1 | 4.3e-25 | 45.35 | uncharacterized protein LOC101208403 [Cucumis sativus] | [more] |
KAE8647228.1 | 4.3e-25 | 45.35 | hypothetical protein Csa_018955 [Cucumis sativus] | [more] |
XP_008445521.1 | 1.3e-24 | 44.51 | PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
AT3G13950.1 | 4.5e-04 | 27.15 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |