CmoCh05G004190 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTTCCGCTACTATCTCTATTAAGGTCAGCAAATCTCTACATGTTTTCATGTAAGGAAAAGAAAGAAAGAATCGTTGTATGCATATACGATTGTTATTGACCTTATCATTATAGCTATTAAGATTATATTATAAATCTCGGTTAGAAATAGAAGTATAAAAAAATTTATAAATTGTAATAACTCAAGCTCACCGTTAGCAGATATTATCCGTTTTGACTCATTATATATCGCTATTAACTTCACAATTTTAAAACACGATTTTATAAGACGCATCTATCAGGGAGAGGTTTCCATATCTTTTTAAGAAATATTTTGTTCCCCTCTACGATTTGATGTCATGTAATCATGGTCAATGTGACATTATTATGTGTGGGGACCACAAACCGATTCATTTCGTTCCGCTCTTCAATCGAGGTACCAAGTACCTCTAGATTATGTATCCATGACTGTAATGTCATGTAATCATAGTCGACCTGACATTATTATGTGTGGGGACCACAAACCAAGTTAGATAATTAACCTAATTCTATTTTTGTTCGTTCCGTTTTAAGAAAGGAACATCCAAAAAAAATAATTTTTTTTAAAATTTTTTCCTTGATTATCGAAATTTGGCCGTTATATTTGGCAAGTCCTAAATCTAAATTTGAATTTTACTATATATTTCAAAAAATTATGAAAGAAAAAAATAAATTAGAATTAGGTGGGGTGAGATAAATCAATCAAGAACAGGTTTTTGTTCATAAGGAACTGAACGACATGTCGAATCCTCTGTTCCTCTCTGGATTCCTTTTCTCCGTCTTCTTCGCCGCTCACCTCTTCCAATTCTGTCATGGAGACCTCGGCACTGCTACATTCTACACCGCTCCTTATCTACGTGAGTTCGCATTAATGTTCTTAATTTTTCGAATTTCTTCGTTTTGCGGCGGCGATGAATGAATGAATGAATGAATGAATGAAATTTGACACAGCCACCGCCTGTGCCGGAAAAGATACCTCGGCGTTTCCGGCCAACAACCTGTTTGCGGCGGCCGGAGAAGGAATATGGGAGAATGGAGCGGCATGTGGAAGACAGTACCAAGTGAGGTGCTTCTCTGCCGATGTGCCGAAGTCGTGCGTTCCAGATCAGATTATTCAGGTGACCATCGTGGATCGTGCGATTTCGACGGTGACGAAGCCGGCGAGAGGGGATACGACGATGGTGTTGTCGACGACGGCGTATAAATCCATTGTTCAAAGATCTGTGTCGCTCGTGAACATTGAATTTCGGGAGTGAGTGGTTTGGAGATTTTTTCTTTGAATTTTGGGGATTTTTTGTGGTTTTTTTTTTTAATGGAATTTTCTGTGGATTTTTGTAGGGTTTGAAATGAATGTTCATCAAGCAGAGGAAGATGAAGTCCGAAGTCCATTGTGTTCAGTTTCCGCCATTGACACACATCTAATTTCTTCTGTTCTTTTCGCCTCCTCAAATCTGAATCCCACCACAACTTACAGTCTAATTTTCTTATTAATAGTATTTTCAAAAGAAATATATATATATATATATATATGAATTCCGCACATACTTCTTATATTGTCTAATAAATATTTGAATTCCAGAGGG ATGATTTCCGCTACTATCTCTATTAAGGAACTGAACGACATGTCGAATCCTCTGTTCCTCTCTGGATTCCTTTTCTCCGTCTTCTTCGCCGCTCACCTCTTCCAATTCTGTCATGGAGACCTCGGCACTGCTACATTCTACACCGCTCCTTATCTACCCACCGCCTGTGCCGGAAAAGATACCTCGGCGTTTCCGGCCAACAACCTGTTTGCGGCGGCCGGAGAAGGAATATGGGAGAATGGAGCGGCATGTGGAAGACAGTACCAAGTGAGGTGCTTCTCTGCCGATGTGCCGAAGTCGTGCGTTCCAGATCAGATTATTCAGGTGACCATCGTGGATCGTGCGATTTCGACGGTGACGAAGCCGGCGAGAGGGGATACGACGATGGTGTTGTCGACGACGGCGTATAAATCCATTGTTCAAAGATCTGTGTCGCTCGTGAACATTGAATTTCGGGAGGTTTGAAATGAATGTTCATCAAGCAGAGGAAGATGAAGTCCGAAGTCCATTGTGTTCAGTTTCCGCCATTGACACACATCTAATTTCTTCTGTTCTTTTCGCCTCCTCAAATCTGAATCCCACCACAACTTACAGTCTAATTTTCTTATTAATAGTATTTTCAAAAGAAATATATATATATATATATATATGAATTCCGCACATACTTCTTATATTGTCTAATAAATATTTGAATTCCAGAGGG ATGATTTCCGCTACTATCTCTATTAAGGAACTGAACGACATGTCGAATCCTCTGTTCCTCTCTGGATTCCTTTTCTCCGTCTTCTTCGCCGCTCACCTCTTCCAATTCTGTCATGGAGACCTCGGCACTGCTACATTCTACACCGCTCCTTATCTACCCACCGCCTGTGCCGGAAAAGATACCTCGGCGTTTCCGGCCAACAACCTGTTTGCGGCGGCCGGAGAAGGAATATGGGAGAATGGAGCGGCATGTGGAAGACAGTACCAAGTGAGGTGCTTCTCTGCCGATGTGCCGAAGTCGTGCGTTCCAGATCAGATTATTCAGGTGACCATCGTGGATCGTGCGATTTCGACGGTGACGAAGCCGGCGAGAGGGGATACGACGATGGTGTTGTCGACGACGGCGTATAAATCCATTGTTCAAAGATCTGTGTCGCTCGTGAACATTGAATTTCGGGAGGTTTGA MISATISIKELNDMSNPLFLSGFLFSVFFAAHLFQFCHGDLGTATFYTAPYLPTACAGKDTSAFPANNLFAAAGEGIWENGAACGRQYQVRCFSADVPKSCVPDQIIQVTIVDRAISTVTKPARGDTTMVLSTTAYKSIVQRSVSLVNIEFREV Homology
BLAST of CmoCh05G004190 vs. ExPASy Swiss-Prot
Match: Q9ZP41 (EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08 Identity = 41/115 (35.65%), Postives = 54/115 (46.96%), Query Frame = 0
BLAST of CmoCh05G004190 vs. ExPASy Swiss-Prot
Match: Q9ZV52 (EG45-like domain containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=EGC2 PE=2 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 1.0e-04 Identity = 35/130 (26.92%), Postives = 56/130 (43.08%), Query Frame = 0
BLAST of CmoCh05G004190 vs. ExPASy TrEMBL
Match: A0A6J1HHJ2 (EG45-like domain containing protein OS=Cucurbita moschata OX=3662 GN=LOC111462996 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 5.9e-72 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of CmoCh05G004190 vs. ExPASy TrEMBL
Match: A0A6J1K9D4 (EG45-like domain containing protein OS=Cucurbita maxima OX=3661 GN=LOC111491845 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 2.3e-68 Identity = 134/141 (95.04%), Postives = 136/141 (96.45%), Query Frame = 0
BLAST of CmoCh05G004190 vs. ExPASy TrEMBL
Match: A0A6J1KQR3 (EG45-like domain containing protein OS=Cucurbita maxima OX=3661 GN=LOC111496357 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52 Identity = 110/140 (78.57%), Postives = 119/140 (85.00%), Query Frame = 0
BLAST of CmoCh05G004190 vs. ExPASy TrEMBL
Match: A0A6J1GJR6 (EG45-like domain containing protein OS=Cucurbita moschata OX=3662 GN=LOC111454490 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.7e-52 Identity = 110/140 (78.57%), Postives = 118/140 (84.29%), Query Frame = 0
BLAST of CmoCh05G004190 vs. ExPASy TrEMBL
Match: A0A1S3BC04 (EG45-like domain containing protein OS=Cucumis melo OX=3656 GN=LOC103488275 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 4.2e-46 Identity = 100/142 (70.42%), Postives = 112/142 (78.87%), Query Frame = 0
BLAST of CmoCh05G004190 vs. NCBI nr
Match: XP_022962593.1 (EG45-like domain containing protein [Cucurbita moschata] >XP_022962594.1 EG45-like domain containing protein [Cucurbita moschata]) HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of CmoCh05G004190 vs. NCBI nr
Match: KAG6598592.1 (EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029525.1 EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 278.5 bits (711), Expect = 3.5e-71 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CmoCh05G004190 vs. NCBI nr
Match: XP_023546766.1 (EG45-like domain containing protein [Cucurbita pepo subsp. pepo] >XP_023546767.1 EG45-like domain containing protein [Cucurbita pepo subsp. pepo] >XP_023546768.1 EG45-like domain containing protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 268.5 bits (685), Expect = 3.6e-68 Identity = 135/141 (95.74%), Postives = 137/141 (97.16%), Query Frame = 0
BLAST of CmoCh05G004190 vs. NCBI nr
Match: XP_022996669.1 (EG45-like domain containing protein [Cucurbita maxima]) HSP 1 Score: 268.1 bits (684), Expect = 4.8e-68 Identity = 134/141 (95.04%), Postives = 136/141 (96.45%), Query Frame = 0
BLAST of CmoCh05G004190 vs. NCBI nr
Match: KAG6585452.1 (EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 218.8 bits (556), Expect = 3.3e-53 Identity = 113/148 (76.35%), Postives = 123/148 (83.11%), Query Frame = 0
BLAST of CmoCh05G004190 vs. TAIR 10
Match: AT2G18660.1 (plant natriuretic peptide A ) HSP 1 Score: 48.1 bits (113), Expect = 7.2e-06 Identity = 35/130 (26.92%), Postives = 56/130 (43.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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