CmoCh05G003610 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G003610
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionethylene-responsive transcription factor ERF003-like
LocationCmo_Chr05: 1637315 .. 1637932 (-)
RNA-Seq ExpressionCmoCh05G003610
SyntenyCmoCh05G003610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCACTTTAAAGAACTAAGACAACGATAACCCACTACCCATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGGCATTGGGGCTCATGGGTGTCCGAGATTCGTCACCCTTTACTGTAAAACCCCATATATTATCTTATTTTCTTGCACCCATTTGCTTAAATTTTCTTACCTTGCTCTCTGTTTTGCAGGAAAACCAGAATTTGGCTGGGCACGTTCGAAACGGCTGAGGACGCTGCCAGAGCCTACGATGAAGCTGCTCGCCTAATGTGCGGTCCTCGTGCCAGAACCAATTTCCCTTTCAACGCAAATGACTCCAATTCCTCTTCTTCTAAGCTCCTCTCTGCTAATTTGACCGCCAAACTCCACCGCTGCTACATGGCGTCGCTTCATTTGACCAACCCATTGCCGCAGAAACCCGCCGAGAAGAAAAGGGCGGTGAAAATGACACAAATGGAGACTGCCCATCAGCCGTTTGTGGCTCTGGAAGAGGACCACATTGAACAGATGATCGAGGAGTTGATTCATTATGGGTCTGTTGAGCTCTGCTCTGTTGTACCGCCGCCGCCGCCGCCGCCTCAGCCGTTTTGATATTAATTTTTAATTTTAAAA

mRNA sequence

CTCACTTTAAAGAACTAAGACAACGATAACCCACTACCCATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGGCATTGGGGCTCATGGGTGTCCGAGATTCGTCACCCTTTACTGAAAACCAGAATTTGGCTGGGCACGTTCGAAACGGCTGAGGACGCTGCCAGAGCCTACGATGAAGCTGCTCGCCTAATGTGCGGTCCTCGTGCCAGAACCAATTTCCCTTTCAACGCAAATGACTCCAATTCCTCTTCTTCTAAGCTCCTCTCTGCTAATTTGACCGCCAAACTCCACCGCTGCTACATGGCGTCGCTTCATTTGACCAACCCATTGCCGCAGAAACCCGCCGAGAAGAAAAGGGCGGTGAAAATGACACAAATGGAGACTGCCCATCAGCCGTTTGTGGCTCTGGAAGAGGACCACATTGAACAGATGATCGAGGAGTTGATTCATTATGGGTCTGTTGAGCTCTGCTCTGTTGTACCGCCGCCGCCGCCGCCGCCTCAGCCGTTTTGATATTAATTTTTAATTTTAAAA

Coding sequence (CDS)

ATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGGCATTGGGGCTCATGGGTGTCCGAGATTCGTCACCCTTTACTGAAAACCAGAATTTGGCTGGGCACGTTCGAAACGGCTGAGGACGCTGCCAGAGCCTACGATGAAGCTGCTCGCCTAATGTGCGGTCCTCGTGCCAGAACCAATTTCCCTTTCAACGCAAATGACTCCAATTCCTCTTCTTCTAAGCTCCTCTCTGCTAATTTGACCGCCAAACTCCACCGCTGCTACATGGCGTCGCTTCATTTGACCAACCCATTGCCGCAGAAACCCGCCGAGAAGAAAAGGGCGGTGAAAATGACACAAATGGAGACTGCCCATCAGCCGTTTGTGGCTCTGGAAGAGGACCACATTGAACAGATGATCGAGGAGTTGATTCATTATGGGTCTGTTGAGCTCTGCTCTGTTGTACCGCCGCCGCCGCCGCCGCCTCAGCCGTTTTGA

Protein sequence

MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF
Homology
[Close]
BLAST of CmoCh05G003610 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.2e-54
Identity = 112/177 (63.28%), Postives = 127/177 (71.75%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEK------------- 120
           TNFP+N N   +SSSKLLSA LTAKLH+CYMASL +T     +   +             
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 121 -------KRAVKMTQME------TAHQPFVALEEDHIEQMIEELIHYGSVELCSVVP 152
                  +   + T+++         Q F  LEEDHIEQMIEEL+HYGS+ELCSV+P
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 177

[Close]
BLAST of CmoCh05G003610 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.6e-43
Identity = 91/117 (77.78%), Postives = 96/117 (82.05%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG RAR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNP--LPQKP---AEKKRAVK 113
           TNFP+N N S SSSSKLLSA L AKLHRCYMASL +T P  LP+ P   A    AVK
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLPEAPRIIASPNNAVK 117

[Close]
BLAST of CmoCh05G003610 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.3e-26
Identity = 61/101 (60.40%), Postives = 73/101 (72.28%), Query Frame = 0 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPF 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NAND-----------------SNSSSSKLLSANLTAKLHRC 90
           N N+                 S+S+SS  LS+ L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]
BLAST of CmoCh05G003610 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-22
Identity = 66/123 (53.66%), Postives = 77/123 (62.60%), Query Frame = 0 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP- 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  FNANDSNS-------SSSKLLSANLTAKLHR-C-----YMASLHLTNPLPQKPAEKKRAV 115
             +N SNS        S K LS  L AKL + C     Y+  L L N        +KRA 
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

[Close]
BLAST of CmoCh05G003610 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-21
Identity = 57/93 (61.29%), Postives = 65/93 (69.89%), Query Frame = 0 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 --------NANDSNS--SSSKLLSANLTAKLHR 89
                  +  D NS   S K LS  L AKL +
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK 97

[Close]
BLAST of CmoCh05G003610 vs. ExPASy TrEMBL
Match: A0A6J1HGM1 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111462773 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 7.4e-86
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH 120
           TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH
Sbjct: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH 120

Query: 121 QPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF 161
           QPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF
Sbjct: 121 QPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF 160

[Close]
BLAST of CmoCh05G003610 vs. ExPASy TrEMBL
Match: A0A6J1KC60 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111491967 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.2e-81
Identity = 158/169 (93.49%), Postives = 158/169 (93.49%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSN--SSSSKLLSANLTAKLHRCYMASLHLTNPLPQKP-------AEKKRAV 120
           TNFPFNANDSN  SSSSKLLSANLTAKLHRCYMASLHLTNP PQKP       AEKKRAV
Sbjct: 61  TNFPFNANDSNSSSSSSKLLSANLTAKLHRCYMASLHLTNPSPQKPAANNPMTAEKKRAV 120

Query: 121 KMTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF 161
           K TQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF
Sbjct: 121 KKTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF 169

[Close]
BLAST of CmoCh05G003610 vs. ExPASy TrEMBL
Match: A0A6J1KP69 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111496339 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.0e-66
Identity = 139/167 (83.23%), Postives = 145/167 (86.83%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQ+RYRGVR+RHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYD AARLMCGPRAR
Sbjct: 1   MARPQRRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPA-----EKKR----AV 120
           TNFPFNANDSN  S KL SANLTAKLHRCYMASLHL NP PQKPA     EK+R    AV
Sbjct: 61  TNFPFNANDSN--SFKLFSANLTAKLHRCYMASLHLKNPSPQKPAMPVTMEKERVAAAAV 120

Query: 121 KMTQMET-AHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPP 158
           K  Q ET AHQPF ALEE+ IEQMIEELIHYGS+ELCSV+PPPPPPP
Sbjct: 121 KKGQTETAAHQPFEALEENDIEQMIEELIHYGSIELCSVMPPPPPPP 165

[Close]
BLAST of CmoCh05G003610 vs. ExPASy TrEMBL
Match: A0A6J1GI88 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111454444 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 7.2e-65
Identity = 134/157 (85.35%), Postives = 137/157 (87.26%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVR+RHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYD AARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKR---AVKMTQME 120
           TNFPFNANDSN  S KL SANLTAKLHRCYMASLHLTNP PQ   E +R   AVK  Q E
Sbjct: 61  TNFPFNANDSN--SFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTE 120

Query: 121 -TAHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPP 154
             AHQPF ALEED IEQMIEELIHYGSVELCSV+PPP
Sbjct: 121 MAAHQPFEALEEDDIEQMIEELIHYGSVELCSVMPPP 155

[Close]
BLAST of CmoCh05G003610 vs. ExPASy TrEMBL
Match: A0A0A0LQD0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382550 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 132/160 (82.50%), Postives = 135/160 (84.38%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQK-------PAEKKRAVK- 120
           TNFPFN+NDSNSSSSKLLSANLTAKLHRC MASLH   P   +          K   V+ 
Sbjct: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGVDVAGIKPLTVEG 120

Query: 121 MTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVVPP 153
            TQ E  HQPFVALEEDHIEQMIEELIHYGSVELCSVVPP
Sbjct: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPP 160

[Close]
BLAST of CmoCh05G003610 vs. NCBI nr
Match: XP_022962279.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 326.2 bits (835), Expect = 1.5e-85
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH 120
           TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH
Sbjct: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH 120

Query: 121 QPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF 161
           QPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF
Sbjct: 121 QPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF 160

[Close]
BLAST of CmoCh05G003610 vs. NCBI nr
Match: KAG7029485.1 (Ethylene-responsive transcription factor [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325.1 bits (832), Expect = 3.4e-85
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH 120
           TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH
Sbjct: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH 120

Query: 121 QPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF 161
           QPFVALEEDHIEQMIEELIHYGSVELCSV+PPPPPPPQPF
Sbjct: 121 QPFVALEEDHIEQMIEELIHYGSVELCSVLPPPPPPPQPF 160

[Close]
BLAST of CmoCh05G003610 vs. NCBI nr
Match: XP_023546750.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.2 bits (814), Expect = 4.2e-83
Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH 120
           TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNP PQKPAEKKRAVKMTQMETAH
Sbjct: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPSPQKPAEKKRAVKMTQMETAH 120

Query: 121 QPFVALEEDHIEQMIEELIHYGSVELCSVV-PPPPPPPQPF 161
           QPFVALEEDHIEQMIEELIHYGSVELCSV+ PPPPPPPQPF
Sbjct: 121 QPFVALEEDHIEQMIEELIHYGSVELCSVLPPPPPPPPQPF 161

[Close]
BLAST of CmoCh05G003610 vs. NCBI nr
Match: XP_022996843.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 158/169 (93.49%), Postives = 158/169 (93.49%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSN--SSSSKLLSANLTAKLHRCYMASLHLTNPLPQKP-------AEKKRAV 120
           TNFPFNANDSN  SSSSKLLSANLTAKLHRCYMASLHLTNP PQKP       AEKKRAV
Sbjct: 61  TNFPFNANDSNSSSSSSKLLSANLTAKLHRCYMASLHLTNPSPQKPAANNPMTAEKKRAV 120

Query: 121 KMTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF 161
           K TQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF
Sbjct: 121 KKTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPPQPF 169

[Close]
BLAST of CmoCh05G003610 vs. NCBI nr
Match: XP_023002525.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 262.7 bits (670), Expect = 2.1e-66
Identity = 139/167 (83.23%), Postives = 145/167 (86.83%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQ+RYRGVR+RHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYD AARLMCGPRAR
Sbjct: 1   MARPQRRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPA-----EKKR----AV 120
           TNFPFNANDSN  S KL SANLTAKLHRCYMASLHL NP PQKPA     EK+R    AV
Sbjct: 61  TNFPFNANDSN--SFKLFSANLTAKLHRCYMASLHLKNPSPQKPAMPVTMEKERVAAAAV 120

Query: 121 KMTQMET-AHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPPP 158
           K  Q ET AHQPF ALEE+ IEQMIEELIHYGS+ELCSV+PPPPPPP
Sbjct: 121 KKGQTETAAHQPFEALEENDIEQMIEELIHYGSIELCSVMPPPPPPP 165

[Close]
BLAST of CmoCh05G003610 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 212.2 bits (539), Expect = 3.0e-55
Identity = 112/177 (63.28%), Postives = 127/177 (71.75%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEK------------- 120
           TNFP+N N   +SSSKLLSA LTAKLH+CYMASL +T     +   +             
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 121 -------KRAVKMTQME------TAHQPFVALEEDHIEQMIEELIHYGSVELCSVVP 152
                  +   + T+++         Q F  LEEDHIEQMIEEL+HYGS+ELCSV+P
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 177

[Close]
BLAST of CmoCh05G003610 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 5.9e-27
Identity = 61/101 (60.40%), Postives = 73/101 (72.28%), Query Frame = 0 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPF 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NAND-----------------SNSSSSKLLSANLTAKLHRC 90
           N N+                 S+S+SS  LS+ L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]
BLAST of CmoCh05G003610 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-23
Identity = 66/123 (53.66%), Postives = 77/123 (62.60%), Query Frame = 0 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP- 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  FNANDSNS-------SSSKLLSANLTAKLHR-C-----YMASLHLTNPLPQKPAEKKRAV 115
             +N SNS        S K LS  L AKL + C     Y+  L L N        +KRA 
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

[Close]
BLAST of CmoCh05G003610 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 57/93 (61.29%), Postives = 65/93 (69.89%), Query Frame = 0 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 --------NANDSNS--SSSKLLSANLTAKLHR 89
                  +  D NS   S K LS  L AKL +
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK 97

[Close]
BLAST of CmoCh05G003610 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.1e-20
Identity = 64/123 (52.03%), Postives = 75/123 (60.98%), Query Frame = 0 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP- 65
           +++RGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  FNANDSNS-------SSSKLLSANLTAKLHR-C-----YMASLHLTNPLPQKPAEKKRAV 115
             +N SNS        S K LS  L AKL + C     Y+  L L N        +KRA 
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

The following BLAST results are available for this feature:
BLAST of CmoCh05G003610 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94AW54.2e-5463.28Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ... [more]
P161462.6e-4377.78Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1[more]
Q9XI338.3e-2660.40Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q3E9582.5e-2253.66Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702... [more]
Q9LFN71.6e-2161.29Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702... [more]
BLAST of CmoCh05G003610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HGM17.4e-86100.00ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36... [more]
A0A6J1KC607.2e-8193.49ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661... [more]
A0A6J1KP691.0e-6683.23ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661... [more]
A0A6J1GI887.2e-6585.35ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36... [more]
A0A0A0LQD02.7e-6482.50AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382550 PE=... [more]
BLAST of CmoCh05G003610 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022962279.11.5e-85100.00ethylene-responsive transcription factor ERF003-like [Cucurbita moschata][more]
KAG7029485.13.4e-8599.38Ethylene-responsive transcription factor [Cucurbita argyrosperma subsp. argyrosp... [more]
XP_023546750.14.2e-8398.14ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo... [more]
XP_022996843.11.5e-8093.49ethylene-responsive transcription factor ERF003-like [Cucurbita maxima][more]
XP_023002525.12.1e-6683.23ethylene-responsive transcription factor ERF003-like [Cucurbita maxima][more]
BLAST of CmoCh05G003610 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G25190.13.0e-5563.28Integrase-type DNA-binding superfamily protein [more]
AT1G15360.15.9e-2760.40Integrase-type DNA-binding superfamily protein [more]
AT5G25390.21.8e-2353.66Integrase-type DNA-binding superfamily protein [more]
AT5G11190.11.2e-2261.29Integrase-type DNA-binding superfamily protein [more]
AT5G25390.11.1e-2052.03Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 30..46
score: 70.91
coord: 8..19
score: 66.97
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 7..70
e-value: 1.5E-41
score: 154.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 7..56
e-value: 5.6E-12
score: 45.7
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 7..64
score: 21.140162
IPR001471AP2/ERF domainCDDcd00018AP2coord: 6..64
e-value: 1.83647E-34
score: 113.521
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 6..66
e-value: 9.8E-27
score: 94.9
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 112..149
NoneNo IPR availablePANTHERPTHR31194:SF112ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003coord: 1..103
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 1..103
NoneNo IPR availablePANTHERPTHR31194:SF112ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003coord: 112..149
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 7..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G003610.1CmoCh05G003610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity