CmoCh05G003330 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G003330
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionganglioside-induced differentiation-associated protein 2-like
LocationCmo_Chr05: 1475231 .. 1476932 (+)
RNA-Seq ExpressionCmoCh05G003330
SyntenyCmoCh05G003330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTATTCTGTAATAACTTTATAATTAAAGCATTTATCTGAAAACAACTATGATATATTGGATATGACAAAGCTCTGTTTCTATCTAATACATAAATTCCATCTCACCTCTTAACAAAACAACCGGCAAGAAAGTTAAGACCAACATTTACCGACCGCCCCCACGGCCCTTAAGAATTATACACACGGCTGAGAGGATAAACATCCAAGGCTGGGCAGAGCCCCTGTCCTGTCGGATAAACCCCCCCACCGAACCCACTCGAATCCAATCCGACCCATCAAAACGAACATGCTTTCGAATATTCCTCTGCCATTTCCCCATTTTAAACCCCGAAACCCACAACTCTTCTACCTTGTCTTTTTTCATCATGAACTACTCTGTTTCTTCTTCTTCTTCTTCTTCTCTCTCCGACCAGCTTCACCTCCTTGGAAAAGCTGAGGTTTTTAAACTCCATGGTCGTGATAGAGCTGGCCGCAATGTGTTCCTCATTGTCGGAAAACACTTTCCAGGTACCGACTTTCAAAACAGAGTGTGAGTGTGAGTGTGCTCTGTTTTACTTATGGTGATTGCTGTTTTGGTTTCAGCTCGGTTCGTGAGCACCCAGGCTGTGAATCTCTATCTGAAGGATAAGATTTTCCCCTTCCTCAAAGATGGGCCCTTCACGTTGGTGTACATTCACACAGATGTTCATTGGACAGAGAATTTCCCTGGAATCTCCAATCTCAAGGCAATCTATGAGTTCATTCCAACCACCATTAAGTACAACCTTAAAGCTGTTTATTTTGTCCACCCCAGTTTGCAGGCTCGTCTGTTCTTCGCCACTGTCGGCCGCCTAATTCTGGGCGCCGAGTAAGCATTCTTCCTCCCCTGAATTTGAACTTCCCATTGCTCAAAAAGCCAAAAAGACCATATCTTTATGGTGGGATTCTTTATTTGTTGACTTGCAGGCTGTATAACAAAGTGAAATATGTGAAAAGAGTGGAGTTTCTATGGGAGTATGTTAGAAGGAAAGAGATAGAGTTACCGGAGTTTGTGTATGATTATGATGAGAAATTGGAGTTCTGTCCTGTGATGGACTCTGGTTTGGAGAGTGATTATCTCAGGCTCTTCTCCGCCTCGCCGTCTGTGGATTCTGCGGTTTCTACGTACTCCTCCATGAGGTGTTTTGCTTGATGGTGAAGACTCAAAGATGGAGTTGGGATACATGGGTCTTTTTGGGTTTTGTTGTAGGAGTTCTTTTGGAAGTAGTGGTAGTAAATATTGTGAGTAGGGACTCTCTGTAGGCAAAGTTAAAAGGTTTATGAGCTTTCCTTATAAAGAAACAAATATAAAGGCAGATGATTCTTCTGAACTCAGCTCCACTAGTTTCTCCCTGCATATGCTCCCAATTCATAATTACGATAGCTTCAACAGGCTACTAACATGATACGCCATAAATACATACATACAGTGGTCGATAGGAACTCTTTGGCTTCCTGTAGTTTCTAGCCCTTCATTCAAAGTCTCATGTCACGTGAGTGGATTTGGTTTCCTCGGTCATTCTGGGAATCTGATAGCTATCACTTACTAGTCAATGAAAGTGAGGTCAGTTTCAGTCTTCTTCATAGTAGTTTGAAAGTCAGTGTCATGTACTTGCTTATGGAATTATGTGTTAAGCATATCGATGTGGAAGTTGACTGATTTCCTCTGGGCAGACCGTCAAA

mRNA sequence

TTTATTCTGTAATAACTTTATAATTAAAGCATTTATCTGAAAACAACTATGATATATTGGATATGACAAAGCTCTGTTTCTATCTAATACATAAATTCCATCTCACCTCTTAACAAAACAACCGGCAAGAAAGTTAAGACCAACATTTACCGACCGCCCCCACGGCCCTTAAGAATTATACACACGGCTGAGAGGATAAACATCCAAGGCTGGGCAGAGCCCCTGTCCTGTCGGATAAACCCCCCCACCGAACCCACTCGAATCCAATCCGACCCATCAAAACGAACATGCTTTCGAATATTCCTCTGCCATTTCCCCATTTTAAACCCCGAAACCCACAACTCTTCTACCTTGTCTTTTTTCATCATGAACTACTCTGTTTCTTCTTCTTCTTCTTCTTCTCTCTCCGACCAGCTTCACCTCCTTGGAAAAGCTGAGGTTTTTAAACTCCATGGTCGTGATAGAGCTGGCCGCAATGTGTTCCTCATTGTCGGAAAACACTTTCCAGCTCGGTTCGTGAGCACCCAGGCTGTGAATCTCTATCTGAAGGATAAGATTTTCCCCTTCCTCAAAGATGGGCCCTTCACGTTGGTGTACATTCACACAGATGTTCATTGGACAGAGAATTTCCCTGGAATCTCCAATCTCAAGGCAATCTATGAGTTCATTCCAACCACCATTAAGTACAACCTTAAAGCTGTTTATTTTGTCCACCCCAGTTTGCAGGCTCGTCTGTTCTTCGCCACTGTCGGCCGCCTAATTCTGGGCGCCGAGCTGTATAACAAAGTGAAATATGTGAAAAGAGTGGAGTTTCTATGGGAGTATGTTAGAAGGAAAGAGATAGAGTTACCGGAGTTTGTGTATGATTATGATGAGAAATTGGAGTTCTGTCCTGTGATGGACTCTGGTTTGGAGAGTGATTATCTCAGGCTCTTCTCCGCCTCGCCGTCTGTGGATTCTGCGGTTTCTACGTACTCCTCCATGAGGTGTTTTGCTTGATGGTGAAGACTCAAAGATGGAGTTGGGATACATGGGTCTTTTTGGGTTTTGTTGTAGGAGTTCTTTTGGAAGTAGTGGTAGTAAATATTGTGAGTAGGGACTCTCTGTAGGCAAAGTTAAAAGGTTTATGAGCTTTCCTTATAAAGAAACAAATATAAAGGCAGATGATTCTTCTGAACTCAGCTCCACTAGTTTCTCCCTGCATATGCTCCCAATTCATAATTACGATAGCTTCAACAGGCTACTAACATGATACGCCATAAATACATACATACAGTGGTCGATAGGAACTCTTTGGCTTCCTGTAGTTTCTAGCCCTTCATTCAAAGTCTCATGTCACGTGAGTGGATTTGGTTTCCTCGGTCATTCTGGGAATCTGATAGCTATCACTTACTAGTCAATGAAAGTGAGGTCAGTTTCAGTCTTCTTCATAGTAGTTTGAAAGTCAGTGTCATGTACTTGCTTATGGAATTATGTGTTAAGCATATCGATGTGGAAGTTGACTGATTTCCTCTGGGCAGACCGTCAAA

Coding sequence (CDS)

ATGAACTACTCTGTTTCTTCTTCTTCTTCTTCTTCTCTCTCCGACCAGCTTCACCTCCTTGGAAAAGCTGAGGTTTTTAAACTCCATGGTCGTGATAGAGCTGGCCGCAATGTGTTCCTCATTGTCGGAAAACACTTTCCAGCTCGGTTCGTGAGCACCCAGGCTGTGAATCTCTATCTGAAGGATAAGATTTTCCCCTTCCTCAAAGATGGGCCCTTCACGTTGGTGTACATTCACACAGATGTTCATTGGACAGAGAATTTCCCTGGAATCTCCAATCTCAAGGCAATCTATGAGTTCATTCCAACCACCATTAAGTACAACCTTAAAGCTGTTTATTTTGTCCACCCCAGTTTGCAGGCTCGTCTGTTCTTCGCCACTGTCGGCCGCCTAATTCTGGGCGCCGAGCTGTATAACAAAGTGAAATATGTGAAAAGAGTGGAGTTTCTATGGGAGTATGTTAGAAGGAAAGAGATAGAGTTACCGGAGTTTGTGTATGATTATGATGAGAAATTGGAGTTCTGTCCTGTGATGGACTCTGGTTTGGAGAGTGATTATCTCAGGCTCTTCTCCGCCTCGCCGTCTGTGGATTCTGCGGTTTCTACGTACTCCTCCATGAGGTGTTTTGCTTGA

Protein sequence

MNYSVSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHPSLQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVMDSGLESDYLRLFSASPSVDSAVSTYSSMRCFA
Homology
BLAST of CmoCh05G003330 vs. ExPASy Swiss-Prot
Match: Q5CZL1 (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis OX=8364 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.0e-12
Identity = 52/173 (30.06%), Postives = 85/173 (49.13%), Query Frame = 0

Query: 2   NYSVSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLK 61
           N  +S + +  LSD    +   +     G D  GR V ++VG++ P   +  +   LY  
Sbjct: 319 NRWLSRARTEDLSD----IAALKALYQSGVDNCGRTVMVVVGRNIPVLLIDMEKALLYF- 378

Query: 62  DKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHPSLQA 121
             +   +    + LVY HT +    N P    LK +Y+ +    K NLKA+YFVHP+ ++
Sbjct: 379 IHMMDHVAAKEYVLVYFHT-LTGEHNHPDSDFLKNMYDIVDVKYKKNLKALYFVHPTFRS 438

Query: 122 RL---FFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEK 172
           ++   FF T       + L +KV  V+ +  L+  V  ++IE+P FV DYD +
Sbjct: 439 KVSSWFFTT----FTVSGLKDKVHQVESLHQLFSAVPPEQIEIPPFVLDYDAR 481

BLAST of CmoCh05G003330 vs. ExPASy Swiss-Prot
Match: A7T167 (Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-11
Identity = 46/147 (31.29%), Postives = 80/147 (54.42%), Query Frame = 0

Query: 30  GRDRAGRNVFLIVGKHFPARFVST-QAVNLYLKDKIFPFLKDGPFTLVYIHTDVHWT-EN 89
           G D  GR V + V +HF A+     +AV  ++   +   + +  + +VY HT  H T EN
Sbjct: 346 GVDFLGRPVVVFVARHFTAQNTDLGKAVAYFI--SVLDRIVNRDYVVVYFHT--HSTEEN 405

Query: 90  FPGISNLKAIYEFIPTTIKYNLKAVYFVHPSLQARL---FFATVGRLILGAELYNKVKYV 149
            P +S LK +Y  +    + NLKA Y VHP++ AR+   FF T       + +  KV ++
Sbjct: 406 QPPMSFLKELYHIVDNKYRRNLKAFYIVHPTVWARIVTWFFTT----FTASSVKEKVHFL 465

Query: 150 KRVEFLWEYVRRKEIELPEFVYDYDEK 172
             V++L++++   ++++P +V +YD K
Sbjct: 466 SGVQYLYDWINPDQLDIPAYVLEYDMK 484

BLAST of CmoCh05G003330 vs. ExPASy Swiss-Prot
Match: Q66HX8 (Ganglioside-induced differentiation-associated protein 2 OS=Danio rerio OX=7955 GN=gdap2 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.8e-11
Identity = 41/146 (28.08%), Postives = 76/146 (52.05%), Query Frame = 0

Query: 30  GRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFLKDGPFTLVYIHTDVHWTENFP 89
           G D  GR V ++VG++ P   +  +   LY    +   +    + +VY HT +    N  
Sbjct: 353 GVDLCGRTVMVVVGRNIPVMLIDMEKALLYF-IHVMDHITVKEYVMVYFHT-LTGEHNHL 412

Query: 90  GISNLKAIYEFIPTTIKYNLKAVYFVHPSLQARL---FFATVGRLILGAELYNKVKYVKR 149
               LK +Y+ +    K NL+A YFVHP+ ++++   FF T       + L +KV +++ 
Sbjct: 413 DTDFLKKLYDIVDAKFKKNLRAFYFVHPTFRSKVSTWFFTTFS----VSGLKDKVHHIEN 472

Query: 150 VEFLWEYVRRKEIELPEFVYDYDEKL 173
           ++ L+  V  ++I++P FV +YD ++
Sbjct: 473 LQQLFTCVLPEQIDIPPFVLEYDSRV 492

BLAST of CmoCh05G003330 vs. ExPASy Swiss-Prot
Match: Q9DBL2 (Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus OX=10090 GN=Gdap2 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.8e-11
Identity = 45/163 (27.61%), Postives = 81/163 (49.69%), Query Frame = 0

Query: 14  SDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFLKDGPF 73
           S+ L  +   +     G D  GR V ++VG++ P   +      LY    +   +    +
Sbjct: 329 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYF-IHVMDHIAVKEY 388

Query: 74  TLVYIHTDVHWTENFPGISN--LKAIYEFIPTTIKYNLKAVYFVHPSLQARL---FFATV 133
            LVY HT    T ++  + +  LK +Y+ +    K NLKAVYFVHP+ ++++   FF T 
Sbjct: 389 VLVYFHT---LTSDYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTF 448

Query: 134 GRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEK 172
                 + L +K+ +V  ++ L+  +  ++I+ P FV +YD +
Sbjct: 449 S----VSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYDAR 483

BLAST of CmoCh05G003330 vs. ExPASy Swiss-Prot
Match: Q66H63 (Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus OX=10116 GN=Gdap2 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.6e-11
Identity = 45/163 (27.61%), Postives = 80/163 (49.08%), Query Frame = 0

Query: 14  SDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFLKDGPF 73
           S+ L  +   +     G D  GR V ++VG++ P   +      LY    +   +    +
Sbjct: 328 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYF-IHVMDHIAVKEY 387

Query: 74  TLVYIHTDVHWTENFPGISN--LKAIYEFIPTTIKYNLKAVYFVHPSLQARL---FFATV 133
            LVY HT    T  +  + +  LK +Y+ +    K NLKAVYFVHP+ ++++   FF T 
Sbjct: 388 VLVYFHT---LTSEYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTF 447

Query: 134 GRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEK 172
                 + L +K+ +V  ++ L+  +  ++I+ P FV +YD +
Sbjct: 448 S----VSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYDAR 482

BLAST of CmoCh05G003330 vs. ExPASy TrEMBL
Match: A0A6J1KC43 (protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491951 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 6.9e-108
Identity = 201/210 (95.71%), Postives = 203/210 (96.67%), Query Frame = 0

Query: 1   MNYSVSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYL 60
           MNYSV    SSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYL
Sbjct: 1   MNYSV----SSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYL 60

Query: 61  KDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHPSLQ 120
           KDKIFPF+KDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPT IK NLKAVYFVHP LQ
Sbjct: 61  KDKIFPFVKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTNIKNNLKAVYFVHPGLQ 120

Query: 121 ARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVMDS 180
           ARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYD+DEKLEFCPVMDS
Sbjct: 121 ARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPVMDS 180

Query: 181 GLESDYLRLFSASPSVDSAVSTYSSMRCFA 211
           GLESDYLRLFSASPSVDSAVSTYSSMRCFA
Sbjct: 181 GLESDYLRLFSASPSVDSAVSTYSSMRCFA 206

BLAST of CmoCh05G003330 vs. ExPASy TrEMBL
Match: A0A1S4DW79 (ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC107990288 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.1e-92
Identity = 171/206 (83.01%), Postives = 192/206 (93.20%), Query Frame = 0

Query: 5   VSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKI 64
           ++ SSSSSLSDQLHLLGK EVF+LHGRD+AGRNV LIVGK+FPARFVS+QAVN+YLKDKI
Sbjct: 1   MNCSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKI 60

Query: 65  FPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHPSLQARLF 124
           FP LKDGPFT+VYIHTDVHWTEN PGISNLKAIYE IP TIK N++AVYF+HPSLQ R+F
Sbjct: 61  FPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVF 120

Query: 125 FATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVMDSGLES 184
           FATVGRL+L AELYNKVKYVKRVEFLWE+VRRKE+ELP+FVYD+DEKLEFCPVMDS LE+
Sbjct: 121 FATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLEN 180

Query: 185 DYLRLFSASPSVDSAVSTYSSMRCFA 211
           DYLR+FS SPS++S VSTY SMRCFA
Sbjct: 181 DYLRVFSPSPSLNSGVSTY-SMRCFA 205

BLAST of CmoCh05G003330 vs. ExPASy TrEMBL
Match: A0A5A7VHB1 (Ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001720 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.1e-92
Identity = 173/210 (82.38%), Postives = 192/210 (91.43%), Query Frame = 0

Query: 1   MNYSVSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYL 60
           MNY     SSSSLSDQLHLLGK EVF+LHGRD+AGRNV LIVGK+FPARFVS+QAVN+YL
Sbjct: 1   MNY-----SSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYL 60

Query: 61  KDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHPSLQ 120
           KDKIFP LKDGPFT+VYIHTDVHWTEN PGISNLKAIYE IP TIK N++AVYF+HPSLQ
Sbjct: 61  KDKIFPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQ 120

Query: 121 ARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVMDS 180
            R+FFATVGRL+L AELYNKVKYVKRVEFLWE+VRRKE+ELP+FVYD+DEKLEFCPVMDS
Sbjct: 121 TRVFFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDS 180

Query: 181 GLESDYLRLFSASPSVDSAVSTYSSMRCFA 211
            LE+DYLR+FS SPS++S VSTY SMRCFA
Sbjct: 181 DLENDYLRVFSPSPSLNSGVSTY-SMRCFA 204

BLAST of CmoCh05G003330 vs. ExPASy TrEMBL
Match: A0A0A0LML6 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G348170 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.1e-92
Identity = 170/204 (83.33%), Postives = 191/204 (93.63%), Query Frame = 0

Query: 7   SSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFP 66
           SSSSSSLSDQLHLLGK EVF+LHGRD+AGRNV LIVGK+FPARFVS+QAVN+YLKDKIFP
Sbjct: 4   SSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFP 63

Query: 67  FLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHPSLQARLFFA 126
            LKDGPFT+VYIHTDVHWTEN PGISNLKAIYE IP TIK N++AVYF+HPSLQ R+FFA
Sbjct: 64  LLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFA 123

Query: 127 TVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVMDSGLESDY 186
           TVGRL+L AELYNKVKYVKRVEFLWE+VRRKE++LP+FVYD+DEKLEFCPVM+S LE+DY
Sbjct: 124 TVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLENDY 183

Query: 187 LRLFSASPSVDSAVSTYSSMRCFA 211
           LR+FS SPS++S VSTY SMRCFA
Sbjct: 184 LRVFSPSPSLNSGVSTY-SMRCFA 206

BLAST of CmoCh05G003330 vs. ExPASy TrEMBL
Match: A0A6J1HFG8 (protein GDAP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111462564 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.8e-87
Identity = 163/171 (95.32%), Postives = 166/171 (97.08%), Query Frame = 0

Query: 40  LIVGKHFPARFVSTQAVNLYLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYE 99
           +++     ARFVSTQAVNLYLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYE
Sbjct: 1   MVIAVLVSARFVSTQAVNLYLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYE 60

Query: 100 FIPTTIKYNLKAVYFVHPSLQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEI 159
           FIPTTIKYNLKAVYFVHPSLQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEI
Sbjct: 61  FIPTTIKYNLKAVYFVHPSLQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEI 120

Query: 160 ELPEFVYDYDEKLEFCPVMDSGLESDYLRLFSASPSVDSAVSTYSSMRCFA 211
           ELPEFVYDYDEKLEFCPVMDSGLESDYLRLFSASPSVDSAVSTYSSMRCFA
Sbjct: 121 ELPEFVYDYDEKLEFCPVMDSGLESDYLRLFSASPSVDSAVSTYSSMRCFA 171

BLAST of CmoCh05G003330 vs. NCBI nr
Match: KAG7029460.1 (Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412.1 bits (1058), Expect = 2.8e-111
Identity = 209/212 (98.58%), Postives = 209/212 (98.58%), Query Frame = 0

Query: 1   MNYSV--SSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNL 60
           MNYSV  SSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNL
Sbjct: 1   MNYSVSSSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNL 60

Query: 61  YLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHPS 120
           YLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIK NLKAVYFVHPS
Sbjct: 61  YLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPS 120

Query: 121 LQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVM 180
           LQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVM
Sbjct: 121 LQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVM 180

Query: 181 DSGLESDYLRLFSASPSVDSAVSTYSSMRCFA 211
           DSGLESDYLRLFSASPSVDSAVSTYSSMRCFA
Sbjct: 181 DSGLESDYLRLFSASPSVDSAVSTYSSMRCFA 212

BLAST of CmoCh05G003330 vs. NCBI nr
Match: KAG6598524.1 (Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 411.8 bits (1057), Expect = 3.6e-111
Identity = 209/213 (98.12%), Postives = 209/213 (98.12%), Query Frame = 0

Query: 1   MNYSV---SSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVN 60
           MNYSV   SSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVN
Sbjct: 1   MNYSVSSSSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVN 60

Query: 61  LYLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHP 120
           LYLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIK NLKAVYFVHP
Sbjct: 61  LYLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHP 120

Query: 121 SLQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPV 180
           SLQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPV
Sbjct: 121 SLQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPV 180

Query: 181 MDSGLESDYLRLFSASPSVDSAVSTYSSMRCFA 211
           MDSGLESDYLRLFSASPSVDSAVSTYSSMRCFA
Sbjct: 181 MDSGLESDYLRLFSASPSVDSAVSTYSSMRCFA 213

BLAST of CmoCh05G003330 vs. NCBI nr
Match: KAG6598528.1 (Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110
Identity = 208/214 (97.20%), Postives = 208/214 (97.20%), Query Frame = 0

Query: 1   MNYSVSSSSSSSLS----DQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAV 60
           MNYSVSSSSSSS S    DQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAV
Sbjct: 1   MNYSVSSSSSSSSSSLSPDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAV 60

Query: 61  NLYLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVH 120
           NLYLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIK NLKAVYFVH
Sbjct: 61  NLYLKDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVH 120

Query: 121 PSLQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCP 180
           PSLQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCP
Sbjct: 121 PSLQARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCP 180

Query: 181 VMDSGLESDYLRLFSASPSVDSAVSTYSSMRCFA 211
           VMDSGLESDYLRLFSASPSVDSAVSTYSSMRCFA
Sbjct: 181 VMDSGLESDYLRLFSASPSVDSAVSTYSSMRCFA 214

BLAST of CmoCh05G003330 vs. NCBI nr
Match: XP_023546880.1 (protein GDAP2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.8 bits (1039), Expect = 4.4e-109
Identity = 204/210 (97.14%), Postives = 206/210 (98.10%), Query Frame = 0

Query: 1   MNYSVSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYL 60
           MNYSV SSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYL
Sbjct: 1   MNYSV-SSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYL 60

Query: 61  KDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHPSLQ 120
           KDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIK NLKAVYFVHP LQ
Sbjct: 61  KDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQ 120

Query: 121 ARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVMDS 180
           ARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYD+DEKLEFCP+MDS
Sbjct: 121 ARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDS 180

Query: 181 GLESDYLRLFSASPSVDSAVSTYSSMRCFA 211
           GLESDYLRLF ASPSVDSAVSTYSSMRCFA
Sbjct: 181 GLESDYLRLFPASPSVDSAVSTYSSMRCFA 209

BLAST of CmoCh05G003330 vs. NCBI nr
Match: XP_022996823.1 (protein GDAP2 homolog [Cucurbita maxima])

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107
Identity = 201/210 (95.71%), Postives = 203/210 (96.67%), Query Frame = 0

Query: 1   MNYSVSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYL 60
           MNYSV    SSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYL
Sbjct: 1   MNYSV----SSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYL 60

Query: 61  KDKIFPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHPSLQ 120
           KDKIFPF+KDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPT IK NLKAVYFVHP LQ
Sbjct: 61  KDKIFPFVKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTNIKNNLKAVYFVHPGLQ 120

Query: 121 ARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVMDS 180
           ARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYD+DEKLEFCPVMDS
Sbjct: 121 ARLFFATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPVMDS 180

Query: 181 GLESDYLRLFSASPSVDSAVSTYSSMRCFA 211
           GLESDYLRLFSASPSVDSAVSTYSSMRCFA
Sbjct: 181 GLESDYLRLFSASPSVDSAVSTYSSMRCFA 206

BLAST of CmoCh05G003330 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 224.9 bits (572), Expect = 5.9e-59
Identity = 109/203 (53.69%), Postives = 150/203 (73.89%), Query Frame = 0

Query: 8   SSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPF 67
           SS  S  +Q  L+ K E+FK+HGRD+ GR +  I+GK FPARF+S   +  YL++KIFP 
Sbjct: 2   SSQISEIEQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPR 61

Query: 68  LKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHPSLQARLFFAT 127
           L   PF ++Y+HT V  +ENFPGIS L+AIY+ IP  ++ NL+ VYF+HP LQ+RLF AT
Sbjct: 62  LGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLAT 121

Query: 128 VGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVMDSGLESDYL 187
            GR +    LY K++Y+ RV++LWE+VRR EIE+PEFVYD+D+ LE+ P+MD G ESD+ 
Sbjct: 122 CGRFLFSGGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHA 181

Query: 188 RLFSASPSVDSAVSTYSSMRCFA 211
           R+F A  +VDS+VS++ SMRC +
Sbjct: 182 RVF-AGAAVDSSVSSF-SMRCIS 202

BLAST of CmoCh05G003330 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 162.2 bits (409), Expect = 4.7e-40
Identity = 78/172 (45.35%), Postives = 114/172 (66.28%), Query Frame = 0

Query: 24  EVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPFLKDGPFTLVYIHTDVH 83
           + F L G DR+G  +F IVGK+FPAR VS + +  Y+  KI     +GP  LVY+H+ V 
Sbjct: 53  QFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMHSTVQ 112

Query: 84  WTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHPSLQARLFFATVGRLILGAELYNKVKY 143
             +N PGI+ L+ IYE +P+ IK  L+ VYF+HP L++RL  AT+GRL+L   LY K+KY
Sbjct: 113 KDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGLYWKIKY 172

Query: 144 VKRVEFLWEYVRRKEIELPEFVYDYDEKLEFCPVMDSGLESDYLRLFSASPS 196
           V R+++LWE +++ E+E+P+FV ++D  LE  P+ D G+E D  +L     S
Sbjct: 173 VSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPDPFQLSEVQSS 224

BLAST of CmoCh05G003330 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-10
Identity = 40/165 (24.24%), Postives = 89/165 (53.94%), Query Frame = 0

Query: 5   VSSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKI 64
           ++ ++S +LS+    + + ++    G D  G  V ++VG HF  R +  +   LY+  + 
Sbjct: 383 LAKANSINLSE----IAEMKIVYRGGVDTEGHPVMVVVGAHFLLRCLDLERFVLYVIKEF 442

Query: 65  FPFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKYNLKAVYFVHPSLQARLF 124
            P ++  P+++VY H+     +  P +  +K + + +    + NL+A+Y +HP+   +  
Sbjct: 443 EPVIQK-PYSIVYFHSAAS-LQVQPDLGWMKRLEQILGRKHQRNLQAIYVLHPTFHLKAT 502

Query: 125 FATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDYD 170
             T+ +  +   ++ KV Y  R+  L++YV R+++ +P+FV+ +D
Sbjct: 503 ILTM-QFFVDNVVWKKVVYADRLLQLFKYVPREQLTIPDFVFQHD 540

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q5CZL19.0e-1230.06Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis O... [more]
A7T1671.2e-1131.29Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1[more]
Q66HX85.8e-1128.08Ganglioside-induced differentiation-associated protein 2 OS=Danio rerio OX=7955 ... [more]
Q9DBL25.8e-1127.61Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus OX=1009... [more]
Q66H637.6e-1127.61Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus OX... [more]
Match NameE-valueIdentityDescription
A0A6J1KC436.9e-10895.71protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491951 PE=4 SV=1[more]
A0A1S4DW793.1e-9283.01ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo OX... [more]
A0A5A7VHB14.1e-9282.38Ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo va... [more]
A0A0A0LML64.1e-9283.33CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G348170 P... [more]
A0A6J1HFG81.8e-8795.32protein GDAP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111462564 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG7029460.12.8e-11198.58Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6598524.13.6e-11198.12Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6598528.12.4e-11097.20Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023546880.14.4e-10997.14protein GDAP2 homolog [Cucurbita pepo subsp. pepo][more]
XP_022996823.11.4e-10795.71protein GDAP2 homolog [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT4G35750.15.9e-5953.69SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein... [more]
AT3G10210.14.7e-4045.35SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein... [more]
AT1G69340.11.7e-1024.24appr-1-p processing enzyme family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 19..170
e-value: 9.0E-5
score: 31.9
IPR001251CRAL-TRIO lipid binding domainPFAMPF13716CRAL_TRIO_2coord: 35..170
e-value: 5.9E-29
score: 101.1
IPR001251CRAL-TRIO lipid binding domainCDDcd00170SEC14coord: 28..162
e-value: 3.707E-8
score: 48.9206
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 19..173
e-value: 4.7E-28
score: 99.7
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 24..159
NoneNo IPR availablePANTHERPTHR11106:SF101PROTEIN, PUTATIVE-RELATEDcoord: 5..210
NoneNo IPR availablePANTHERPTHR11106GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATEDcoord: 5..210

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G003330.1CmoCh05G003330.1mRNA