CmoCh05G001610 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGATCAAGACTCCTCCCCTCCGGTCCAAGTTGAATCCCGAGAGCCGGAGATCAAAGATCCCATTAAGCCGGCGAACCCATTTGCTACCAAATTCAGCATATGGCCACCAACGCAGCGCACTCGTGACGCTGTTACAAGCCGTCTGATCGAAACCCTCTCCACCCCTTCCATTCTCTCTAAGCGTTACGGCACGATTCCGCCTGAAGCCGCCGCCACCATTGCGCGGGTCATCGAGGACGAAGCGTATGCCACTGCCGATGGGTCTCCAACCACCGTGGACGACGGCATCGAGATTCTGCAGCTCTACTCCAAGGAGATTAGTAAGCGGATGCTCGAGGCGGTGAAGGGTAGAGCGATTCCCGCGGCTCCGACGGAAAATGGTGAGAAGGAGGGATCGTCATCGCCTGTTGTTGATCCTAATGACGAAAACCCTACTTCGGAAATTGAATCTTGA ATGTCCGATCAAGACTCCTCCCCTCCGGTCCAAGTTGAATCCCGAGAGCCGGAGATCAAAGATCCCATTAAGCCGGCGAACCCATTTGCTACCAAATTCAGCATATGGCCACCAACGCAGCGCACTCGTGACGCTGTTACAAGCCGTCTGATCGAAACCCTCTCCACCCCTTCCATTCTCTCTAAGCGTTACGGCACGATTCCGCCTGAAGCCGCCGCCACCATTGCGCGGGTCATCGAGGACGAAGCGTATGCCACTGCCGATGGGTCTCCAACCACCGTGGACGACGGCATCGAGATTCTGCAGCTCTACTCCAAGGAGATTAGTAAGCGGATGCTCGAGGCGGTGAAGGGTAGAGCGATTCCCGCGGCTCCGACGGAAAATGGTGAGAAGGAGGGATCGTCATCGCCTGTTGTTGATCCTAATGACGAAAACCCTACTTCGGAAATTGAATCTTGA ATGTCCGATCAAGACTCCTCCCCTCCGGTCCAAGTTGAATCCCGAGAGCCGGAGATCAAAGATCCCATTAAGCCGGCGAACCCATTTGCTACCAAATTCAGCATATGGCCACCAACGCAGCGCACTCGTGACGCTGTTACAAGCCGTCTGATCGAAACCCTCTCCACCCCTTCCATTCTCTCTAAGCGTTACGGCACGATTCCGCCTGAAGCCGCCGCCACCATTGCGCGGGTCATCGAGGACGAAGCGTATGCCACTGCCGATGGGTCTCCAACCACCGTGGACGACGGCATCGAGATTCTGCAGCTCTACTCCAAGGAGATTAGTAAGCGGATGCTCGAGGCGGTGAAGGGTAGAGCGATTCCCGCGGCTCCGACGGAAAATGGTGAGAAGGAGGGATCGTCATCGCCTGTTGTTGATCCTAATGACGAAAACCCTACTTCGGAAATTGAATCTTGA MSDQDSSPPVQVESREPEIKDPIKPANPFATKFSIWPPTQRTRDAVTSRLIETLSTPSILSKRYGTIPPEAAATIARVIEDEAYATADGSPTTVDDGIEILQLYSKEISKRMLEAVKGRAIPAAPTENGEKEGSSSPVVDPNDENPTSEIES Homology
BLAST of CmoCh05G001610 vs. ExPASy Swiss-Prot
Match: Q9M7N6 (MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 8.1e-31 Identity = 76/137 (55.47%), Postives = 99/137 (72.26%), Query Frame = 0
BLAST of CmoCh05G001610 vs. ExPASy Swiss-Prot
Match: Q9C500 (WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.6e-26 Identity = 67/132 (50.76%), Postives = 88/132 (66.67%), Query Frame = 0
BLAST of CmoCh05G001610 vs. ExPASy Swiss-Prot
Match: Q9FMH6 (WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 5.1e-25 Identity = 67/123 (54.47%), Postives = 84/123 (68.29%), Query Frame = 0
BLAST of CmoCh05G001610 vs. ExPASy Swiss-Prot
Match: Q0WQ91 (WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.8e-14 Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 0
BLAST of CmoCh05G001610 vs. ExPASy Swiss-Prot
Match: Q9LE82 (RAN GTPase-activating protein 1 OS=Arabidopsis thaliana OX=3702 GN=RANGAP1 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08 Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of CmoCh05G001610 vs. ExPASy TrEMBL
Match: A0A6J1HFL2 (MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462597 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CmoCh05G001610 vs. ExPASy TrEMBL
Match: A0A6J1KE17 (MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492391 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.2e-71 Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of CmoCh05G001610 vs. ExPASy TrEMBL
Match: A0A5A7V571 (MFP1 attachment factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00640 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 9.6e-51 Identity = 112/154 (72.73%), Postives = 129/154 (83.77%), Query Frame = 0
BLAST of CmoCh05G001610 vs. ExPASy TrEMBL
Match: A0A1S3BBH7 (MFP1 attachment factor 1 OS=Cucumis melo OX=3656 GN=LOC103487862 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 9.6e-51 Identity = 112/154 (72.73%), Postives = 129/154 (83.77%), Query Frame = 0
BLAST of CmoCh05G001610 vs. ExPASy TrEMBL
Match: A0A0A0LNB9 (MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_2G355000 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 9.9e-48 Identity = 109/151 (72.19%), Postives = 125/151 (82.78%), Query Frame = 0
BLAST of CmoCh05G001610 vs. NCBI nr
Match: XP_022961994.1 (MFP1 attachment factor 1-like [Cucurbita moschata]) HSP 1 Score: 288.9 bits (738), Expect = 2.6e-74 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CmoCh05G001610 vs. NCBI nr
Match: KAG6598350.1 (MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 287.3 bits (734), Expect = 7.5e-74 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CmoCh05G001610 vs. NCBI nr
Match: XP_023545637.1 (MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72 Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CmoCh05G001610 vs. NCBI nr
Match: XP_022997483.1 (MFP1 attachment factor 1-like [Cucurbita maxima]) HSP 1 Score: 278.1 bits (710), Expect = 4.5e-71 Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of CmoCh05G001610 vs. NCBI nr
Match: XP_038885619.1 (MFP1 attachment factor 1-like [Benincasa hispida]) HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55 Identity = 119/152 (78.29%), Postives = 130/152 (85.53%), Query Frame = 0
BLAST of CmoCh05G001610 vs. TAIR 10
Match: AT1G47200.1 (WPP domain protein 2 ) HSP 1 Score: 119.0 bits (297), Expect = 3.3e-27 Identity = 67/132 (50.76%), Postives = 88/132 (66.67%), Query Frame = 0
BLAST of CmoCh05G001610 vs. TAIR 10
Match: AT5G43070.1 (WPP domain protein 1 ) HSP 1 Score: 115.5 bits (288), Expect = 3.6e-26 Identity = 67/123 (54.47%), Postives = 84/123 (68.29%), Query Frame = 0
BLAST of CmoCh05G001610 vs. TAIR 10
Match: AT5G27940.1 (WPP domain protein 3 ) HSP 1 Score: 80.5 bits (197), Expect = 1.3e-15 Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 0
BLAST of CmoCh05G001610 vs. TAIR 10
Match: AT3G63130.1 (RAN GTPase activating protein 1 ) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09 Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of CmoCh05G001610 vs. TAIR 10
Match: AT3G63130.2 (RAN GTPase activating protein 1 ) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09 Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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