CmoCh05G000690 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G000690
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING-type domain-containing protein
Location	Cmo_Chr05: 252742 .. 255104 (+)
RNA-Seq Expression	CmoCh05G000690
Synteny	CmoCh05G000690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGGGAATCCTTCTTCCCGCTCTCAGACGGCGCTGCCTCTTCCCTATCGGTAATCGCCGGAGGATTAAAACGCTCTTTATTTATACTTTGCAATGCCCTTTCCCCAATCACAAAAGTCGATACCAAAAGCGCTTTGATCAAAGTAAGCCTCGAAGAGCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAGTAAAAGCTGAAGAACCAATTCTTCATAGGTTGCTTTCTGGTGATACTTACTTCGTGGGGGATTCAAAGAAGCCCCGGCCACCAAATTTCTCTTCTGGGTTTCCTTTTCTGAGCTCAATTTTGTGGGTATTGTTTTTGGGGTTTTCGGATTATGTATTATCGGGTAGCGAGGTCTTCTTGTAAGGATTCTCTGAAGGTCTTGGAAGAAGATGTAGAACGCGCCAATGCTCTGTTAGTATCCATTTCCCCTTCACTGTTTATCTTCTCTGTTCATAGGAAGTTTGATGTGTTTACTGGTTTCTGTGATGCATTTAGGCCTATGGATATGATTGATTTTGATGGATATTTTTCCCAATTCTGGTTTCTGGGCTTGCAGGGCTGCTGCAATTCCAAGAGCCAAACATGGTTCCTATCTCCAAATGAAGCTGGTTTACAATCAATTGGCTCCTCTCCTTCTGTTTTTGATGCAATGGGTGGATTGTTCATGCACTTGTATACTTCCCAGATACTTAAATTTCTTCCACATACTTGTTTACAAGGCTGGTCTCTCTTTTCTTCACTTGTTTTATGTTCGCTGATTTCTTGGAGATGTGAGTTTGTTCTGTCGCATGAACTGTGTCGTTTTCTTTGCTCAGGTTTACACAGATGGAAGGCCTAACATATCAGCTCATGGAAGAAAGGCAACTGTGAAGGAATTTTACGGTACATTTTTCCCTACCAATTGTCTGCCCTGGTTTATCAAAATAGTTCTCTAATGCCTTATGCAAAAACCATTACCATTAGTGCAGTTAAAACGCTTTACATATATCCATGATTATAGAAGGAAGAACATGAGTCAGTGCTATAACACAACTAAAAACAAGAGGGAGATAATTTATACTATGGTTGTTTGCAGGGGGTTTCATTGAAACTTTGTTCTGAAAAAAGTTCCAACCCATCCCTATGCCTCTTGTTTGAAATCATTAGGCCTCTCCTATTGCGGTATTTGTTAGCGTAGAGATATAACTAAGTTTACCGTAACAAATCAACTTGGTAGAACATGTGAGATCAACATCGGTAAGAGAGGGAAACAAAGCATTCCTGGGTGTGAAAACGAACATATCTACTAGTGGTGGGGTTGAGCTGTTACAAATGGTATCAGAGCCAGACATCGGGTGGTGTGCCCCCAAGAGAAGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAATAGACGAGTTTTAAAATCGTGAGACTGATGGTAATACGTAACGGGCCAAAGTGGACAATATGACTTGGGCAACGGTCATTTACTCTCCCATTAGTCTTGATTAAAAGGAACGATACTGCATTATTTGAGGTTATGAGCTTGTTTTGTTTGCAACAAACGTCCTACTTCAGCTATCATATTGCCATCCCTTCAACGCCTCCAAGCGAGCGCGGAGGAGTTGGATAATGCTAAAGCGAAGCACGTCAAGTCGGATAACTCGAGTGAGAGAAGAGTTGAAGGAGATGGAAAACAGTCCAATGGTGATTTAGAGAGAGAAGATGAGTGTGGGATTTGCCTAGAACAACCTTCCACAAAGATGGTGCTGCCAAACTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGTAACAAACACCAACCATCCTAACATCATCATCAAATGTTACCACAGTCTATTGCTTCAAGGTCTTTGCTTGCCAATGATTTTGCAGGAACACGAGATCGGAGTCGTGCCCGTTTTGCCGGGGAAGCTTGAAGAGGATCAAATCAGAGGACTTGTGGGTGCTAACTGGAAATGAAGATGTAGTCGATGCTGAAAAGGTTTCAAAGGAAGATGTATCACGCTTTTATCTCTACATAACCACCCTCCCCAAGGAATATCCAGATGCCCTTTTCTTGGTTTATTATGAATTCTTGATCTGAACAAAACTACACCAATTTCTTAACCCATTGACTTCAAAGCCGACCGTCAAATGTAAACACACAAATCAAATGTTTCAATCTTTTTTATATATATTTAAATTAAAAGTCACGTGGATATGGGCCGGAGTCAATGGACTTGTAAAATTCAGGCCCATTTCTCGGCCCAAAGATTTTAAAATAATAAAATAGTCTATAATTAATTAA

mRNA sequence

AAAAAGGGAATCCTTCTTCCCGCTCTCAGACGGCGCTGCCTCTTCCCTATCGGTAATCGCCGGAGGATTAAAACGCTCTTTATTTATACTTTGCAATGCCCTTTCCCCAATCACAAAAGTCGATACCAAAAGCGCTTTGATCAAAGTTGCTTTCTGGTGATACTTACTTCGTGGGGGATTCAAAGAAGCCCCGGCCACCAAATTTCTCTTCTGGGTTTCCTTTTCTGAGCTCAATTTTGTGGGTATTGTTTTTGGGGTTTTCGGATTATGTATTATCGGGTAGCGAGGTCTTCTTGTAAGGATTCTCTGAAGGTCTTGGAAGAAGATGTAGAACGCGCCAATGCTCTGGCTGCTGCAATTCCAAGAGCCAAACATGGTTCCTATCTCCAAATGAAGCTGGTTTACAATCAATTGGCTCCTCTCCTTCTGTTTTTGATGCAATGGGTGGATTGTTCATGCACTTGTATACTTCCCAGATACTTAAATTTCTTCCACATACTTGTTTACAAGGTTTACACAGATGGAAGGCCTAACATATCAGCTCATGGAAGAAAGGCAACTGTGAAGGAATTTTACGCTATCATATTGCCATCCCTTCAACGCCTCCAAGCGAGCGCGGAGGAGTTGGATAATGCTAAAGCGAAGCACGTCAAGTCGGATAACTCGAGTGAGAGAAGAGTTGAAGGAGATGGAAAACAGTCCAATGGTGATTTAGAGAGAGAAGATGAGTGTGGGATTTGCCTAGAACAACCTTCCACAAAGATGGTGCTGCCAAACTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGAACACGAGATCGGAGTCGTGCCCGTTTTGCCGGGGAAGCTTGAAGAGGATCAAATCAGAGGACTTGTGGGTGCTAACTGGAAATGAAGATGTAGTCGATGCTGAAAAGGTTTCAAAGGAAGATGTATCACGCTTTTATCTCTACATAACCACCCTCCCCAAGGAATATCCAGATGCCCTTTTCTTGGTTTATTATGAATTCTTGATCTGAACAAAACTACACCAATTTCTTAACCCATTGACTTCAAAGCCGACCGTCAAATGTAAACACACAAATCAAATGTTTCAATCTTTTTTATATATATTTAAATTAAAAGTCACGTGGATATGGGCCGGAGTCAATGGACTTGTAAAATTCAGGCCCATTTCTCGGCCCAAAGATTTTAAAATAATAAAATAGTCTATAATTAATTAA

Coding sequence (CDS)

ATGTATTATCGGGTAGCGAGGTCTTCTTGTAAGGATTCTCTGAAGGTCTTGGAAGAAGATGTAGAACGCGCCAATGCTCTGGCTGCTGCAATTCCAAGAGCCAAACATGGTTCCTATCTCCAAATGAAGCTGGTTTACAATCAATTGGCTCCTCTCCTTCTGTTTTTGATGCAATGGGTGGATTGTTCATGCACTTGTATACTTCCCAGATACTTAAATTTCTTCCACATACTTGTTTACAAGGTTTACACAGATGGAAGGCCTAACATATCAGCTCATGGAAGAAAGGCAACTGTGAAGGAATTTTACGCTATCATATTGCCATCCCTTCAACGCCTCCAAGCGAGCGCGGAGGAGTTGGATAATGCTAAAGCGAAGCACGTCAAGTCGGATAACTCGAGTGAGAGAAGAGTTGAAGGAGATGGAAAACAGTCCAATGGTGATTTAGAGAGAGAAGATGAGTGTGGGATTTGCCTAGAACAACCTTCCACAAAGATGGTGCTGCCAAACTGCTGCCATTCAATGTGCATCAAATGTTACCACAATTGGAACACGAGATCGGAGTCGTGCCCGTTTTGCCGGGGAAGCTTGAAGAGGATCAAATCAGAGGACTTGTGGGTGCTAACTGGAAATGAAGATGTAGTCGATGCTGAAAAGGTTTCAAAGGAAGATGTATCACGCTTTTATCTCTACATAACCACCCTCCCCAAGGAATATCCAGATGCCCTTTTCTTGGTTTATTATGAATTCTTGATCTGA

Protein sequence

MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEELDNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYPDALFLVYYEFLI

Homology

[Close]

BLAST of CmoCh05G000690 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.5e-53
Identity = 108/241 (44.81%), Postives = 143/241 (59.34%), Query Frame = 0


Query: 7   RSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWVDCSCTC 66
           R S KDSLK LE D++ AN LA+  P    G Y+QM+L Y+  A L LFL+QW DC    
Sbjct: 2   RKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH--- 61

Query: 67  ILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEELDNAKAK 126
                L    IL+YK Y DG+  +S H RK +++EFY ++ PSL +L     +++  K K
Sbjct: 62  -FAGALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 121

Query: 127 HVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCYHNWNTR 186
            +      ++     GK S  DLERE+ECGICLE    K+VLP C HSMCI CY NW  R
Sbjct: 122 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLE-IRNKVVLPTCNHSMCINCYRNWRAR 181

Query: 187 SESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYPDALFLV 246
           S+SCPFCRGSLKR+ S DLW+ T + ++ D   + KE++ R  +YI  LP    D   + 
Sbjct: 182 SQSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVP 237

Query: 247 Y 248
           Y
Sbjct: 242 Y 237

[Close]

BLAST of CmoCh05G000690 vs. ExPASy Swiss-Prot
Match: Q4VBT5 (Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.7e-04
Identity = 22/68 (32.35%), Postives = 32/68 (47.06%), Query Frame = 0


Query: 155 CGICLE------QPSTKM--VLPNCCHSMCIKCYHNWNTRSE-------SCPFCRGSLKR 208
           CG+C+E       PS +   +L NCCH  C+KC   W +  +       SCP CR +   
Sbjct: 236 CGVCMEVVFEKTNPSERRFGILSNCCHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNF 295

[Close]

BLAST of CmoCh05G000690 vs. ExPASy TrEMBL
Match: A0A6J1HBV1 (E3 ubiquitin-protein ligase CHFR-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462660 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 8.8e-142
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60
           MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV
Sbjct: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120

Query: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180
           DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY
Sbjct: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180

Query: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240
           HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP
Sbjct: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240

Query: 241 DALFLVYYEFLI 253
           DALFLVYYEFLI
Sbjct: 241 DALFLVYYEFLI 252

[Close]

BLAST of CmoCh05G000690 vs. ExPASy TrEMBL
Match: A0A6J1HDV0 (uncharacterized protein LOC111462660 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462660 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.3e-133
Identity = 241/252 (95.63%), Postives = 241/252 (95.63%), Query Frame = 0


Query: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60
           MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV
Sbjct: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120

Query: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180
           DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY
Sbjct: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180

Query: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240
           HNWNTRSESCPFCRGSLKRIKSEDLWVLTGN           EDVSRFYLYITTLPKEYP
Sbjct: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGN-----------EDVSRFYLYITTLPKEYP 240

Query: 241 DALFLVYYEFLI 253
           DALFLVYYEFLI
Sbjct: 241 DALFLVYYEFLI 241

[Close]

BLAST of CmoCh05G000690 vs. ExPASy TrEMBL
Match: A0A6J1KBT4 (uncharacterized protein LOC111491874 OS=Cucurbita maxima OX=3661 GN=LOC111491874 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.5e-130
Identity = 234/252 (92.86%), Postives = 238/252 (94.44%), Query Frame = 0


Query: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60
           MYYRVARSSCKDSLKVLEED+ERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV
Sbjct: 1   MYYRVARSSCKDSLKVLEEDIERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120
           DCSCTC+LPRYLNFFHILVYKVYTDGRPNISAHGRKATVK+FYAIILPSLQRLQASAEEL
Sbjct: 61  DCSCTCVLPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAIILPSLQRLQASAEEL 120

Query: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180
           DNAKAKHVKSDNSSERRVEGDGK  NGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY
Sbjct: 121 DNAKAKHVKSDNSSERRVEGDGKHWNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180

Query: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240
           HNWNTRSESCPFCRGSLKRIKSEDLWVLTGN           EDV RFYLYITTLPKEYP
Sbjct: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGN-----------EDVPRFYLYITTLPKEYP 240

Query: 241 DALFLVYYEFLI 253
           DALFLVY+EFLI
Sbjct: 241 DALFLVYHEFLI 241

[Close]

BLAST of CmoCh05G000690 vs. ExPASy TrEMBL
Match: A0A1S3BB06 (uncharacterized protein LOC103487741 OS=Cucumis melo OX=3656 GN=LOC103487741 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 8.5e-129
Identity = 228/252 (90.48%), Postives = 239/252 (94.84%), Query Frame = 0


Query: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60
           MYYR+A SSC DSLKVLEEDV RANALAAAIPRAKHGSYLQMKLVYNQLAP  LFLMQW+
Sbjct: 1   MYYRLAMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVK+FYA+ILPSLQRLQA+ EE 
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQANVEEF 120

Query: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180
           DNAK KH KSDNSSERR++GDGK SNGDLEREDECGICLE PSTKMVLPNCCHSMCIKCY
Sbjct: 121 DNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLE-PSTKMVLPNCCHSMCIKCY 180

Query: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240
           HNWN RSESCPFCRGSLKRIKSEDLWVLT NEDVVDAEKVSKED+SRFYLYI++LPKEYP
Sbjct: 181 HNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYP 240

Query: 241 DALFLVYYEFLI 253
           DALFLVYYE+LI
Sbjct: 241 DALFLVYYEYLI 251

[Close]

BLAST of CmoCh05G000690 vs. ExPASy TrEMBL
Match: A0A0A0LMV8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350270 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127
Identity = 226/252 (89.68%), Postives = 237/252 (94.05%), Query Frame = 0


Query: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60
           MYYR+A SSC DSLKVLEEDV RAN LAAAIPRAKHGSYLQMKLVYNQLAP  LFLMQW+
Sbjct: 1   MYYRLAMSSCSDSLKVLEEDVRRANTLAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVK+FYA+ILPSLQRLQA  EE 
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQADIEEF 120

Query: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180
           D+AK KH KSDNSSERR++GDGK SNGDLEREDECGICLE PSTKMVLPNCCHSMCIKCY
Sbjct: 121 DSAKKKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLE-PSTKMVLPNCCHSMCIKCY 180

Query: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240
           HNWN RSESCPFCRGSLKRIKSEDLWVLT NEDVVDAEKVSKED+SRFYLYI++LPKEYP
Sbjct: 181 HNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYP 240

Query: 241 DALFLVYYEFLI 253
           DALFLVYYE+LI
Sbjct: 241 DALFLVYYEYLI 251

[Close]

BLAST of CmoCh05G000690 vs. NCBI nr
Match: XP_022962105.1 (E3 ubiquitin-protein ligase CHFR-like isoform X1 [Cucurbita moschata] >XP_022962107.1 E3 ubiquitin-protein ligase CHFR-like isoform X1 [Cucurbita moschata] >KAG6598257.1 E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 512.7 bits (1319), Expect = 1.8e-141
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60
           MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV
Sbjct: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120

Query: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180
           DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY
Sbjct: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180

Query: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240
           HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP
Sbjct: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240

Query: 241 DALFLVYYEFLI 253
           DALFLVYYEFLI
Sbjct: 241 DALFLVYYEFLI 252

[Close]

BLAST of CmoCh05G000690 vs. NCBI nr
Match: XP_023546493.1 (E3 ubiquitin-protein ligase CHFR-like [Cucurbita pepo subsp. pepo] >XP_023546495.1 E3 ubiquitin-protein ligase CHFR-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 504.2 bits (1297), Expect = 6.5e-139
Identity = 248/252 (98.41%), Postives = 249/252 (98.81%), Query Frame = 0


Query: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60
           MYY VARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV
Sbjct: 1   MYYWVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120

Query: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180
           DNAKAKHVKSDNS+ERRVEGDGK SNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY
Sbjct: 121 DNAKAKHVKSDNSNERRVEGDGKHSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180

Query: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240
           HNWN RSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP
Sbjct: 181 HNWNMRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240

Query: 241 DALFLVYYEFLI 253
           DALFLVYYEFLI
Sbjct: 241 DALFLVYYEFLI 252

[Close]

BLAST of CmoCh05G000690 vs. NCBI nr
Match: XP_022962108.1 (uncharacterized protein LOC111462660 isoform X2 [Cucurbita moschata])

HSP 1 Score: 484.2 bits (1245), Expect = 6.9e-133
Identity = 241/252 (95.63%), Postives = 241/252 (95.63%), Query Frame = 0


Query: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60
           MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV
Sbjct: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120

Query: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180
           DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY
Sbjct: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180

Query: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240
           HNWNTRSESCPFCRGSLKRIKSEDLWVLTGN           EDVSRFYLYITTLPKEYP
Sbjct: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGN-----------EDVSRFYLYITTLPKEYP 240

Query: 241 DALFLVYYEFLI 253
           DALFLVYYEFLI
Sbjct: 241 DALFLVYYEFLI 241

[Close]

BLAST of CmoCh05G000690 vs. NCBI nr
Match: XP_022996708.1 (uncharacterized protein LOC111491874 [Cucurbita maxima] >XP_022996710.1 uncharacterized protein LOC111491874 [Cucurbita maxima])

HSP 1 Score: 473.8 bits (1218), Expect = 9.3e-130
Identity = 234/252 (92.86%), Postives = 238/252 (94.44%), Query Frame = 0


Query: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60
           MYYRVARSSCKDSLKVLEED+ERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV
Sbjct: 1   MYYRVARSSCKDSLKVLEEDIERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120
           DCSCTC+LPRYLNFFHILVYKVYTDGRPNISAHGRKATVK+FYAIILPSLQRLQASAEEL
Sbjct: 61  DCSCTCVLPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAIILPSLQRLQASAEEL 120

Query: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180
           DNAKAKHVKSDNSSERRVEGDGK  NGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY
Sbjct: 121 DNAKAKHVKSDNSSERRVEGDGKHWNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180

Query: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240
           HNWNTRSESCPFCRGSLKRIKSEDLWVLTGN           EDV RFYLYITTLPKEYP
Sbjct: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGN-----------EDVPRFYLYITTLPKEYP 240

Query: 241 DALFLVYYEFLI 253
           DALFLVY+EFLI
Sbjct: 241 DALFLVYHEFLI 241

[Close]

BLAST of CmoCh05G000690 vs. NCBI nr
Match: XP_008444404.1 (PREDICTED: uncharacterized protein LOC103487741 [Cucumis melo])

HSP 1 Score: 469.5 bits (1207), Expect = 1.8e-128
Identity = 228/252 (90.48%), Postives = 239/252 (94.84%), Query Frame = 0


Query: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60
           MYYR+A SSC DSLKVLEEDV RANALAAAIPRAKHGSYLQMKLVYNQLAP  LFLMQW+
Sbjct: 1   MYYRLAMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120
           DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVK+FYA+ILPSLQRLQA+ EE 
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQANVEEF 120

Query: 121 DNAKAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCY 180
           DNAK KH KSDNSSERR++GDGK SNGDLEREDECGICLE PSTKMVLPNCCHSMCIKCY
Sbjct: 121 DNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLE-PSTKMVLPNCCHSMCIKCY 180

Query: 181 HNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYP 240
           HNWN RSESCPFCRGSLKRIKSEDLWVLT NEDVVDAEKVSKED+SRFYLYI++LPKEYP
Sbjct: 181 HNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYP 240

Query: 241 DALFLVYYEFLI 253
           DALFLVYYE+LI
Sbjct: 241 DALFLVYYEYLI 251

[Close]

BLAST of CmoCh05G000690 vs. TAIR 10
Match: AT1G24440.1 (RING/U-box superfamily protein )

HSP 1 Score: 313.2 bits (801), Expect = 2.0e-85
Identity = 156/254 (61.42%), Postives = 195/254 (76.77%), Query Frame = 0


Query: 1   MYYRVARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWV 60
           MYY++ +SS +DSLK+LE D+E AN LAA IP  K G  LQMKLV + LAP  +FL+QW+
Sbjct: 1   MYYQLTKSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWM 60

Query: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEEL 120
           D S  C+LPRY +FFHIL+YKV  DGR N S +GRKAT++EFY +ILPSL+RL  +  +L
Sbjct: 61  DFS--CLLPRYFDFFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINFADL 120

Query: 121 DNAKA--KHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIK 180
            +      + K+    +  +EG    ++ DLEREDECGICLE P TKMVLPNCCH+MCIK
Sbjct: 121 PDESLWYPNPKAITKKQYDIEGSRYMNSIDLEREDECGICLE-PCTKMVLPNCCHAMCIK 180

Query: 181 CYHNWNTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKE 240
           CY NWNT+SESCPFCRGS+KR+ SEDLWVLT +EDVVD E V+KED+ RFYL+I +LPK+
Sbjct: 181 CYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPKD 240

Query: 241 YPDALFLVYYEFLI 253
           YP+A FLVY E+LI
Sbjct: 241 YPEAAFLVYNEYLI 251

[Close]

BLAST of CmoCh05G000690 vs. TAIR 10
Match: AT1G13195.1 (RING/U-box superfamily protein )

HSP 1 Score: 302.0 bits (772), Expect = 4.5e-82
Identity = 147/247 (59.51%), Postives = 186/247 (75.30%), Query Frame = 0


Query: 8   SSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWVDCSCTCI 67
           SS  +SLKVLE DV+ AN+LA AIP  K+   LQMKLV++  A LLLFL++W+D S +C+
Sbjct: 14  SSYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCL 73

Query: 68  LPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEELDNA---- 127
           +PRYLN FH+LVYKV +DG+P ++ HGRKAT+ EFY +ILPSLQ L ++ +EL+      
Sbjct: 74  IPRYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGF 133

Query: 128 KAKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCYHNW 187
             K +    + E R     + SN  LERE+ECGICLE   TKMVLPNCCHSMCIKCY NW
Sbjct: 134 DLKRLSKKITKEAR---SSRFSNAGLEREEECGICLE-TCTKMVLPNCCHSMCIKCYRNW 193

Query: 188 NTRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYPDAL 247
           N +S+SCPFCRGS+KR+ SEDLWVL G+ DVVD    S+ED+ RFYLYI +LPK+YP+AL
Sbjct: 194 NLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEAL 253

Query: 248 FLVYYEF 251
           F+VYYE+
Sbjct: 254 FVVYYEY 256

[Close]

BLAST of CmoCh05G000690 vs. TAIR 10
Match: AT1G13195.2 (RING/U-box superfamily protein )

HSP 1 Score: 273.5 bits (698), Expect = 1.7e-73
Identity = 130/220 (59.09%), Postives = 166/220 (75.45%), Query Frame = 0


Query: 35  KHGSYLQMKLVYNQLAPLLLFLMQWVDCSCTCILPRYLNFFHILVYKVYTDGRPNISAHG 94
           K+   LQMKLV++  A LLLFL++W+D S +C++PRYLN FH+LVYKV +DG+P ++ HG
Sbjct: 3   KNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPKLTTHG 62

Query: 95  RKATVKEFYAIILPSLQRLQASAEELDNA----KAKHVKSDNSSERRVEGDGKQSNGDLE 154
           RKAT+ EFY +ILPSLQ L ++ +EL+        K +    + E R     + SN  LE
Sbjct: 63  RKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEAR---SSRFSNAGLE 122

Query: 155 REDECGICLEQPSTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTG 214
           RE+ECGICLE   TKMVLPNCCHSMCIKCY NWN +S+SCPFCRGS+KR+ SEDLWVL G
Sbjct: 123 REEECGICLE-TCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAG 182

Query: 215 NEDVVDAEKVSKEDVSRFYLYITTLPKEYPDALFLVYYEF 251
           + DVVD    S+ED+ RFYLYI +LPK+YP+ALF+VYYE+
Sbjct: 183 DNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 218

[Close]

BLAST of CmoCh05G000690 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein )

HSP 1 Score: 216.1 bits (549), Expect = 3.3e-56
Identity = 106/240 (44.17%), Postives = 154/240 (64.17%), Query Frame = 0


Query: 5   VARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWVDCSC 64
           +A+ S KDSLK LE D++ AN LA   PR K G+ +QM+L Y+  A   LFL+QW DC  
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCK- 60

Query: 65  TCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEELDNAK 124
              L  +L    +L+Y  Y DG+  +S + RKA+++EF A+ILPSL +LQ    ++D++K
Sbjct: 61  ---LAGFLGLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSK 120

Query: 125 AKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCYHNWN 184
            K V        R + + + S  ++ERE+ECGIC+E  ++K+VLPNC HS+CIKCY +W 
Sbjct: 121 QKEV---CKMRYRKKDESEMSEIEIEREEECGICMEM-NSKVVLPNCTHSLCIKCYRDWR 180

Query: 185 TRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYPDALF 244
            RS+SCPFCR SLKR+ S DLW+     D V+   +++E+  R ++YI  LP   PD ++
Sbjct: 181 GRSQSCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVY 232

[Close]

BLAST of CmoCh05G000690 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein )

HSP 1 Score: 212.2 bits (539), Expect = 4.7e-55
Identity = 108/240 (45.00%), Postives = 148/240 (61.67%), Query Frame = 0


Query: 5   VARSSCKDSLKVLEEDVERANALAAAIPRAKHGSYLQMKLVYNQLAPLLLFLMQWVDCSC 64
           +A+ S KDSLK LE D++ AN +A   PR K G+ +QM+L Y   A  LLFL+QW DC  
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCH- 60

Query: 65  TCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKEFYAIILPSLQRLQASAEELDNAK 124
              L   L    +L+Y  Y DG+  +S + RK ++K+FYA+I PSL +L+    +LD+ K
Sbjct: 61  ---LAGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDLDDRK 120

Query: 125 AKHVKSDNSSERRVEGDGKQSNGDLEREDECGICLEQPSTKMVLPNCCHSMCIKCYHNWN 184
            K V       +      K S  D+ERE+ECGIC+E  +  +VLPNC HS+CIKCY +W+
Sbjct: 121 QKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEM-NNMVVLPNCTHSLCIKCYRDWH 180

Query: 185 TRSESCPFCRGSLKRIKSEDLWVLTGNEDVVDAEKVSKEDVSRFYLYITTLPKEYPDALF 244
            RSESCPFCR SLKR+ S DLW+L    D V+   + +E+  R ++YI  LP   PD +F
Sbjct: 181 GRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQVF 235

The following BLAST results are available for this feature:

BLAST of CmoCh05G000690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	1.5e-53	44.81	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]
Q4VBT5	3.7e-04	32.35	Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 P...	[more]

BLAST of CmoCh05G000690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBV1	8.8e-142	100.00	E3 ubiquitin-protein ligase CHFR-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1HDV0	3.3e-133	95.63	uncharacterized protein LOC111462660 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KBT4	4.5e-130	92.86	uncharacterized protein LOC111491874 OS=Cucurbita maxima OX=3661 GN=LOC111491874...	[more]
A0A1S3BB06	8.5e-129	90.48	uncharacterized protein LOC103487741 OS=Cucumis melo OX=3656 GN=LOC103487741 PE=...	[more]
A0A0A0LMV8	1.2e-127	89.68	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350270 P...	[more]

BLAST of CmoCh05G000690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962105.1	1.8e-141	100.00	E3 ubiquitin-protein ligase CHFR-like isoform X1 [Cucurbita moschata] >XP_022962...	[more]
XP_023546493.1	6.5e-139	98.41	E3 ubiquitin-protein ligase CHFR-like [Cucurbita pepo subsp. pepo] >XP_023546495...	[more]
XP_022962108.1	6.9e-133	95.63	uncharacterized protein LOC111462660 isoform X2 [Cucurbita moschata]	[more]
XP_022996708.1	9.3e-130	92.86	uncharacterized protein LOC111491874 [Cucurbita maxima] >XP_022996710.1 uncharac...	[more]
XP_008444404.1	1.8e-128	90.48	PREDICTED: uncharacterized protein LOC103487741 [Cucumis melo]	[more]

BLAST of CmoCh05G000690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24440.1	2.0e-85	61.42	RING/U-box superfamily protein	[more]
AT1G13195.1	4.5e-82	59.51	RING/U-box superfamily protein	[more]
AT1G13195.2	1.7e-73	59.09	RING/U-box superfamily protein	[more]
AT5G58787.1	3.3e-56	44.17	RING/U-box superfamily protein	[more]
AT3G47160.1	4.7e-55	45.00	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 110..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..149
None	No IPR available	PANTHER	PTHR15315:SF35	F21J9.10	coord: 5..252
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 5..252
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 148..200
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 155..193 e-value: 7.8E-5 score: 32.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 153..194 e-value: 5.6E-8 score: 33.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 155..194 score: 11.987676
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 132..228 e-value: 1.8E-14 score: 54.9
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 171..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G000690.1	CmoCh05G000690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity