CmoCh04G030620 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G030620
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CASP-like protein
Location	Cmo_Chr04: 21406927 .. 21409857 (+)
RNA-Seq Expression	CmoCh04G030620
Synteny	CmoCh04G030620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGGGAGTCCAGGAAGAATGAGCGGCTTTGCACTGAGATGTGCGCAATGGCTTTTCGCTGCTGCATCGATTGGGGTTATGGTTACTGCTCCTGGCTTCTTCAACTCCACTGCCTTCTGGTAATAATGCTAATCTATTTCCCGCTCACCATTTCTTTTGTTTTACTGTGAAATGTGGATTAGCTGTTCAATCTTGGCCGGAGCCGTTGTAGTGTGGGTGTTTCTGACAATCGAAGTTCAATTCAGTAGGGAAAGAAACAAAATATTGTATGGCTTGCCTGCGTCATTCCTTTCTTGGAGTATTATTAATTGTTGGTAAAAGATGATCGTAGTTAGTGAGGTCTTTTCAAATGATTGAGAACTTCAGCACTTTCATTGTTCTTACAAGGTGTCCTGGTTTCATTATGATTCAGCGTTCGAATTATTGTTGTTCTCAGTTCAATCAGCTTATCTTTTCAGATATATCTGAAGGTGAAACTGTTGGCTTATGTTTTCCATATTGAGAAAGTTTTTTTTGATAAGATGAACCCAATGTTAGAAAAGATGGAGGACGAATTTACTGCAAACTGCATTATGTTTTTTGGAGCCTAATCGTTTTAAAAATTTATGCTGAGCTATTTTTTGGGCAGACCCCGCGAGCAATGTCATTGTTCTTAGTGTTAGAGTCCATCCTAGCCACCATTTTTGTGTTCATTAGGCGATGAATTGTTTGCGTCTAGGTTGCCCATTCGTTTGATCATAATGTTACTGTTTTCTTTGAAAATGGTCCTTCAACGAATTGAACTAACAGTTTGGATAGGGGACGTGTGCATGTGCAACTTAGCGTGAATAGGGGAAACCACAGTTCCTGCCATGAATGTGAATATATGAAAACTTTTCTGATGCTGAAATTTGCCAATGCAGTTTTGAACTTTCCGCTTTAAATATTCTAAATTACACTACATTCTCTGATTCTTTCTTTATATTTTCATTGTTTTATGTGACTGTTTTGACCAGTCTATCTTCAGTTCTATTGCAAAGTTGTGGTTCTTGTCTAATTTTGGCACTTTTATTCCGACCAGTTACCTAATTGCTTCCATGGGGCTTCAAATTCTTTGGAGCTTTGGATTAGCATGCCTTGATTTGCATGCTTTGCATATGAAGAAAAGCCTGCGGAATTCAGTTTTATTGTGTCTATTTGCTATTGGAGATTGGGTTAGTATCACCGTCTTTTGACTTGCGAGTACATGAGTGTAATTTTATCACAATATTGCGGACTAAATGTTACAAGATTTCATGGTGGATGACAAGATCCATACATGTTTTGGATTTAAGGAGGTTTTATTGTATTTTTGAAGTTTTAGAGAATTATCTTTAAGATTACAAGTTACTATTATTATGGTATTGATTGCCAATGTACAAGTATTAGCAGAGCAAGTACAGGTCATTATGGTATTGATCGCCAAAGTTAGAACCTTTCAATTAACCATAGCTTACTCTAAGTTTATTTTCAAGGCTATAAACAATCATTCATGTCGTTGCATTAGTATGAAGATTTCAAATATTAGAATGAAAGTTGCATTTTATGCCTCTTAAGCCATGGACTTGTTCCTTTGCATTTCTTGTGTTTAGATTTGCATGCTAGAGTCATTCAAGTAGACGTGATCAAGCTATATTGTGGAGTGATTCGAATTACGAGTTTTCTTTACTCTTGATCTTGATCATCCAGATAATTCGTTCCAAAACTTTCTCTTAGAGTCATTCAAGTAGTCTAATGATTGTATGTGATCGTGGAAGAGACCCCGAAAGTAACTTAGTCCATCTAAGTCTCCCAGTGTCATTGACCAATTACCTGCTTAAGTTTGAACGTCTCAGTTGGTATGGGACCATAAAAGTTTTTGACTAATTATAGCCAGTTTCCATCTCTATCCGAGATAAGCCAATAGAGACCATACAAGGCTCCCTATCACTGGTGCGTTTCCCCCCAAATTCGTGAAGATACGCTAGACCAATTGGAGACCTCAAGCTGAATTGACTGTTTTACAATTCTACACGCTGTCCTCTGAATGTTGTATAATATTAGTACTTGGACTTCCTGATGTTTACATAAAGTTTAAAGTGCGACATGAGGTTTGCTGTAAGCCAATTCCCTGCCCTTGGATTGTATAAGTACAAGTCCACCACTATCGGATATTATCTTTTTTGGGTTTTTCCTTTCGAGTTTTCCTTAAGATCTTTAAAACACGTCTGCTAGGGAGAAGTTTTCACACCCTTATAAAGAATGTTTCGTTCTCCTCTCCAACCAATATGAAATCTCACGATTGGTTCTCTGCAATTCCTTCAGTCCAATCACATGCTTTCAGGATTTTGGATGTTGTGGATGCTTGAGAGGTTATAAGAAACCATGAGCGTAGGGTATGTCAGGCTGCTTTGTCTATCTTTTGACATTGTCAACGGGGTATTTGGATCCAAGAAATTGAATAAAGTTTCACAATCTCGCTCGGTAATCAATATTCCGAAGCTCAATGCTCCTATAAAGCTACTGTGGACATTCCAAATAAATATTAGCTACAGGTTTGAATATTGATCTCGAGGAAAAAGTTCTCCATTTTGTTGCATTTCTTCTGGTACTTGGTAGACATTCATGCTTTTATTAATTTCTTTTAGCATAATAGCTACTTTATGAATTCATCCATATGAAATGCAGGTTGTAGCTACGCTTTCGCTCGCGGCTGCATCCTCATCCGCTGGGGTGGCCATTTTGTATTCAAGGGACTTGAACTACTGCAGATCACCACTTCGTATTTCATGTAGCAAGATTGAAATATCTGTGGCTTTTGCTTTTGTCTCATGGTTCTTACTTGCTATATCTTCGCTAGTAACATTTTGGCTCTTGGGCACTGTATAATAACATGACTTGGCCTTCTTTTTCTTGAAGGCTTTCCCTCCC

mRNA sequence

ATGTTTGGGAGTCCAGGAAGAATGAGCGGCTTTGCACTGAGATGTGCGCAATGGCTTTTCGCTGCTGCATCGATTGGGGTTATGGTTACTGCTCCTGGCTTCTTCAACTCCACTGCCTTCTGTTCTATTGCAAAGTTGTGGTTCTTGTCTAATTTTGGCACTTTTATTCCGACCAGTTACCTAATTGCTTCCATGGGGCTTCAAATTCTTTGGAGCTTTGGATTAGCATGCCTTGATTTGCATGCTTTGCATATGAAGAAAAGCCTGCGGAATTCAGTTTTATTGTGTCTATTTGCTATTGGAGATTGGGTTGTAGCTACGCTTTCGCTCGCGGCTGCATCCTCATCCGCTGGGGTGGCCATTTTGTATTCAAGGGACTTGAACTACTGCAGATCACCACTTCGTATTTCATGTAGCAAGATTGAAATATCTGTGGCTTTTGCTTTTGTCTCATGGTTCTTACTTGCTATATCTTCGCTAGTAACATTTTGGCTCTTGGGCACTGTATAATAACATGACTTGGCCTTCTTTTTCTTGAAGGCTTTCCCTCCC

Coding sequence (CDS)

ATGTTTGGGAGTCCAGGAAGAATGAGCGGCTTTGCACTGAGATGTGCGCAATGGCTTTTCGCTGCTGCATCGATTGGGGTTATGGTTACTGCTCCTGGCTTCTTCAACTCCACTGCCTTCTGTTCTATTGCAAAGTTGTGGTTCTTGTCTAATTTTGGCACTTTTATTCCGACCAGTTACCTAATTGCTTCCATGGGGCTTCAAATTCTTTGGAGCTTTGGATTAGCATGCCTTGATTTGCATGCTTTGCATATGAAGAAAAGCCTGCGGAATTCAGTTTTATTGTGTCTATTTGCTATTGGAGATTGGGTTGTAGCTACGCTTTCGCTCGCGGCTGCATCCTCATCCGCTGGGGTGGCCATTTTGTATTCAAGGGACTTGAACTACTGCAGATCACCACTTCGTATTTCATGTAGCAAGATTGAAATATCTGTGGCTTTTGCTTTTGTCTCATGGTTCTTACTTGCTATATCTTCGCTAGTAACATTTTGGCTCTTGGGCACTGTATAA

Protein sequence

MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSYLIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV

Homology

[Close]

BLAST of CmoCh04G030620 vs. ExPASy Swiss-Prot
Match: Q945M8 (CASP-like protein 5B2 OS=Arabidopsis thaliana OX=3702 GN=At3g53850 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 7.6e-38
Identity = 87/169 (51.48%), Postives = 111/169 (65.68%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           + G PG + G  LR  Q   AAASIGVMV+A  F   TAFC                  Y
Sbjct: 4   LLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFC------------------Y 63

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           LIASMGLQ+LWSFGLACLD++AL  KK L+N +L+ LF +GDWV A LSLAAA SSAGV 
Sbjct: 64  LIASMGLQLLWSFGLACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVV 123

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           +LY +D+ YC +  +  C + E++VA +FV+W  +A+SS VTFW+L +V
Sbjct: 124 VLYEKDIKYCNTQSQYPCLRYEVAVALSFVTWIQIAVSSHVTFWILASV 154

[Close]

BLAST of CmoCh04G030620 vs. ExPASy Swiss-Prot
Match: Q9LZM5 (CASP-like protein 5B1 OS=Arabidopsis thaliana OX=3702 GN=At5g02060 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-37
Identity = 85/166 (51.20%), Postives = 109/166 (65.66%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           M GSPG MSG  LR  Q   AAASIGVMV++  F N TAFC                  +
Sbjct: 4   MIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFC------------------F 63

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           L+ASMGLQ++WSFGLACLD++A+  K  LR+ +LL LF +GDWV A L+LAAA SSAGV 
Sbjct: 64  LVASMGLQLIWSFGLACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVT 123

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLL 167
           +L+++D  +CR    +SC + +ISV  +F +WFL AISS   FW+L
Sbjct: 124 VLFTKDTEFCRQQPALSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

[Close]

BLAST of CmoCh04G030620 vs. ExPASy Swiss-Prot
Match: B8BD96 (CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.9e-37
Identity = 84/167 (50.30%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 3   GSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSYLI 62
           GSPG  SG +LR +Q +FA AS+  M +A GF N TAFC                  YLI
Sbjct: 6   GSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFC------------------YLI 65

Query: 63  ASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAIL 122
           ASMGLQ+LWSFGLACLD+++L  K+ L N VL+ LF +GDWV A LS AAAS+SAGV IL
Sbjct: 66  ASMGLQLLWSFGLACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTIL 125

Query: 123 YSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           + RD+++CR   ++SC + E+SV  AF++W  +A S++  FWLL ++
Sbjct: 126 FERDVHFCRMYPQLSCGRYELSVILAFITWSFIATSAVSMFWLLASL 154

[Close]

BLAST of CmoCh04G030620 vs. ExPASy Swiss-Prot
Match: Q6K478 (CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.9e-37
Identity = 84/167 (50.30%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 3   GSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSYLI 62
           GSPG  SG +LR +Q +FA AS+  M +A GF N TAFC                  YLI
Sbjct: 6   GSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFC------------------YLI 65

Query: 63  ASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAIL 122
           ASMGLQ+LWSFGLACLD+++L  K+ L N VL+ LF +GDWV A LS AAAS+SAGV IL
Sbjct: 66  ASMGLQLLWSFGLACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTIL 125

Query: 123 YSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           + RD+++CR   ++SC + E+SV  AF++W  +A S++  FWLL ++
Sbjct: 126 FERDVHFCRMYPQLSCGRYELSVILAFITWSFIATSAVSMFWLLASL 154

[Close]

BLAST of CmoCh04G030620 vs. ExPASy Swiss-Prot
Match: B6T990 (CASP-like protein 5B3 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.5e-37
Identity = 85/164 (51.83%), Postives = 109/164 (66.46%), Query Frame = 0


Query: 3   GSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSYLI 62
           GSPG  SG ALR +Q + A AS+G M TA GF N TAFC                  YLI
Sbjct: 6   GSPGTWSGMALRLSQCVSAGASMGAMATAYGFSNYTAFC------------------YLI 65

Query: 63  ASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAIL 122
           ASMGLQ+LWSFGLACLD+++L  K+ L N VL+ LF +GDWV A LS AAAS+SAGV IL
Sbjct: 66  ASMGLQLLWSFGLACLDVYSLKTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTIL 125

Query: 123 YSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLL 167
           + RD+++CR   ++SC +  +SV  AF++W  +A S++  FWLL
Sbjct: 126 FERDVHFCRMYPQLSCGRYALSVVLAFITWSFIATSAVSMFWLL 151

[Close]

BLAST of CmoCh04G030620 vs. ExPASy TrEMBL
Match: A0A6J1GSN5 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457076 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.4e-72
Identity = 151/169 (89.35%), Postives = 151/169 (89.35%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFC                  Y
Sbjct: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFC------------------Y 60

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA
Sbjct: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV
Sbjct: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 151

[Close]

BLAST of CmoCh04G030620 vs. ExPASy TrEMBL
Match: A0A6J1JTC6 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487666 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71
Identity = 150/169 (88.76%), Postives = 151/169 (89.35%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFC                  Y
Sbjct: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFC------------------Y 60

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           LIASMGLQILWSFGLACLDLHA+HMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA
Sbjct: 61  LIASMGLQILWSFGLACLDLHAMHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV
Sbjct: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 151

[Close]

BLAST of CmoCh04G030620 vs. ExPASy TrEMBL
Match: A0A0A0K7M5 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G008760 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.6e-65
Identity = 139/169 (82.25%), Postives = 143/169 (84.62%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           MFGSPGRMSG  LRCAQWLFAA SIG MVTAPGFFNSTAFC                  Y
Sbjct: 74  MFGSPGRMSGLVLRCAQWLFAAVSIGFMVTAPGFFNSTAFC------------------Y 133

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           LIASMGLQILWSFGLACLDLHAL MKKSLRNSVLLCLFAIGDWVV+TLSLAAASSSAGVA
Sbjct: 134 LIASMGLQILWSFGLACLDLHALRMKKSLRNSVLLCLFAIGDWVVSTLSLAAASSSAGVA 193

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           ILYSRDL+YCRSP  ISCSKIEISVAFAF+SWFLL +SSLVTFWLLGTV
Sbjct: 194 ILYSRDLDYCRSPPYISCSKIEISVAFAFISWFLLGLSSLVTFWLLGTV 224

[Close]

BLAST of CmoCh04G030620 vs. ExPASy TrEMBL
Match: A0A1S3B3D0 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103485526 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.6e-65
Identity = 139/169 (82.25%), Postives = 143/169 (84.62%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           MFGSPGRMSG  LRCAQWLFAA SIG MVTAPGFFNSTAFC                  Y
Sbjct: 1   MFGSPGRMSGLVLRCAQWLFAAVSIGFMVTAPGFFNSTAFC------------------Y 60

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           LIASMGLQILWSFGLACLDLHAL MKKSLRNSVLLCLFAIGDWVV+TLSLAAASSSAGVA
Sbjct: 61  LIASMGLQILWSFGLACLDLHALRMKKSLRNSVLLCLFAIGDWVVSTLSLAAASSSAGVA 120

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           ILYSRDL+YCRSP  ISCSKIEISVAFAF+SWFLL +SSLVTFWLLGTV
Sbjct: 121 ILYSRDLDYCRSPPYISCSKIEISVAFAFISWFLLVLSSLVTFWLLGTV 151

[Close]

BLAST of CmoCh04G030620 vs. ExPASy TrEMBL
Match: A0A6J1C1V6 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006665 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.8e-64
Identity = 136/169 (80.47%), Postives = 142/169 (84.02%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           M GSPGRMSG  LRCAQWLFAAASIGVM+TAPGFFNSTAFC                  Y
Sbjct: 1   MLGSPGRMSGLVLRCAQWLFAAASIGVMITAPGFFNSTAFC------------------Y 60

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           LIASMGLQILWSFGLACLD+HAL MKKSLRNSVLLCLFAIGDWVVATL+LAAASSSAGV 
Sbjct: 61  LIASMGLQILWSFGLACLDVHALRMKKSLRNSVLLCLFAIGDWVVATLALAAASSSAGVV 120

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           ILYSRDL+YCR P  I C+KIEISVAFAF+SWFLLAISSLVTFWLLGTV
Sbjct: 121 ILYSRDLDYCRLPPHIQCTKIEISVAFAFISWFLLAISSLVTFWLLGTV 151

[Close]

BLAST of CmoCh04G030620 vs. NCBI nr
Match: KAG7033333.1 (CASP-like protein 5B2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.0 bits (798), Expect = 3.2e-81
Identity = 168/192 (87.50%), Postives = 168/192 (87.50%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFC------------------- 60
           MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFC                   
Sbjct: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCVRIIVVLSSISLSFQIYLK 60

Query: 61  ----SIAKLWFLSNFGTFIPTSYLIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCL 120
               SI KLWFLSNFGTFIPTSYLIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCL
Sbjct: 61  SIFSSIVKLWFLSNFGTFIPTSYLIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCL 120

Query: 121 FAIGDWVVATLSLAAASSSAGVAILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAI 170
           FAIGDWVVATLSLAAASSSAGVAILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAI
Sbjct: 121 FAIGDWVVATLSLAAASSSAGVAILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAI 180

[Close]

BLAST of CmoCh04G030620 vs. NCBI nr
Match: XP_022954983.1 (CASP-like protein 5B2 [Cucurbita moschata] >KAG6602647.1 CASP-like protein 5B2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 279.6 bits (714), Expect = 1.7e-71
Identity = 151/169 (89.35%), Postives = 151/169 (89.35%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFC                  Y
Sbjct: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFC------------------Y 60

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA
Sbjct: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV
Sbjct: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 151

[Close]

BLAST of CmoCh04G030620 vs. NCBI nr
Match: XP_022990919.1 (CASP-like protein 5B2 [Cucurbita maxima])

HSP 1 Score: 278.9 bits (712), Expect = 3.0e-71
Identity = 150/169 (88.76%), Postives = 151/169 (89.35%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFC                  Y
Sbjct: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFC------------------Y 60

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           LIASMGLQILWSFGLACLDLHA+HMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA
Sbjct: 61  LIASMGLQILWSFGLACLDLHAMHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV
Sbjct: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 151

[Close]

BLAST of CmoCh04G030620 vs. NCBI nr
Match: XP_023518253.1 (CASP-like protein 5B1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.7 bits (709), Expect = 6.6e-71
Identity = 150/169 (88.76%), Postives = 151/169 (89.35%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFC                  Y
Sbjct: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFC------------------Y 60

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           LIASMGLQILWSFGLACLDLHALHMKKSLR+SVLLCLFAIGDWVVATLSLAAASSSAGVA
Sbjct: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRSSVLLCLFAIGDWVVATLSLAAASSSAGVA 120

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV
Sbjct: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 151

[Close]

BLAST of CmoCh04G030620 vs. NCBI nr
Match: XP_038884812.1 (CASP-like protein 5B2 [Benincasa hispida])

HSP 1 Score: 260.8 bits (665), Expect = 8.3e-66
Identity = 141/169 (83.43%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           MFGSPGRMSG ALRCAQWLFAAASIG M+TAPGFFNSTAFC                  Y
Sbjct: 1   MFGSPGRMSGLALRCAQWLFAAASIGFMITAPGFFNSTAFC------------------Y 60

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           LIASMGLQILWSFGLACLDLHAL MKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA
Sbjct: 61  LIASMGLQILWSFGLACLDLHALRMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           ILYSRDL+YCR P  I CSKIEISVAFAF+SWFLLAISSLVTFWLLGTV
Sbjct: 121 ILYSRDLDYCRLPPHIPCSKIEISVAFAFISWFLLAISSLVTFWLLGTV 151

[Close]

BLAST of CmoCh04G030620 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 158.3 bits (399), Expect = 5.4e-39
Identity = 87/169 (51.48%), Postives = 111/169 (65.68%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           + G PG + G  LR  Q   AAASIGVMV+A  F   TAFC                  Y
Sbjct: 4   LLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFC------------------Y 63

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           LIASMGLQ+LWSFGLACLD++AL  KK L+N +L+ LF +GDWV A LSLAAA SSAGV 
Sbjct: 64  LIASMGLQLLWSFGLACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVV 123

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGTV 170
           +LY +D+ YC +  +  C + E++VA +FV+W  +A+SS VTFW+L +V
Sbjct: 124 VLYEKDIKYCNTQSQYPCLRYEVAVALSFVTWIQIAVSSHVTFWILASV 154

[Close]

BLAST of CmoCh04G030620 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-38
Identity = 85/166 (51.20%), Postives = 109/166 (65.66%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           M GSPG MSG  LR  Q   AAASIGVMV++  F N TAFC                  +
Sbjct: 4   MIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFC------------------F 63

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           L+ASMGLQ++WSFGLACLD++A+  K  LR+ +LL LF +GDWV A L+LAAA SSAGV 
Sbjct: 64  LVASMGLQLIWSFGLACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVT 123

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLL 167
           +L+++D  +CR    +SC + +ISV  +F +WFL AISS   FW+L
Sbjct: 124 VLFTKDTEFCRQQPALSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

[Close]

BLAST of CmoCh04G030620 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 145.2 bits (365), Expect = 4.8e-35
Identity = 83/166 (50.00%), Postives = 106/166 (63.86%), Query Frame = 0


Query: 3   GSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSYLI 62
           G+PG ++G  LR +Q +FAA SI  MVT+ GFF+ TAFC                  YLI
Sbjct: 6   GTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFC------------------YLI 65

Query: 63  ASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAIL 122
           A+MGLQ++WSFGLA LD  AL  KK+L + VL+ LF +GDWV +TLSLA ASSSAG+ +L
Sbjct: 66  AAMGLQVIWSFGLAILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVL 125

Query: 123 YSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGT 169
           Y  DL  C       C K ++SVA AF+ W  +A+SSL T WLL +
Sbjct: 126 YFGDLGSC--SFEAECWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of CmoCh04G030620 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 114.8 bits (286), Expect = 6.9e-26
Identity = 73/168 (43.45%), Postives = 98/168 (58.33%), Query Frame = 0


Query: 1   MFGSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSY 60
           M G PG + G ALR  Q+LFAAA++ VM +   F + TAFC                  Y
Sbjct: 32  MEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFC------------------Y 91

Query: 61  LIASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVA 120
           L+A+ GLQ LWS  LA +D++A+ +K+SL+N  L+ LFAIGD V +TL+ AAA +SAG+ 
Sbjct: 92  LVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGIT 151

Query: 121 ILYSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGT 169
           +L   DLN C    +  C + E S A AF+SWF    S L  FW L +
Sbjct: 152 VLIDNDLNSC---AQNHCVQFETSTALAFISWFAALPSFLFNFWSLAS 178

[Close]

BLAST of CmoCh04G030620 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 97.8 bits (242), Expect = 8.7e-21
Identity = 63/166 (37.95%), Postives = 93/166 (56.02%), Query Frame = 0


Query: 3   GSPGRMSGFALRCAQWLFAAASIGVMVTAPGFFNSTAFCSIAKLWFLSNFGTFIPTSYLI 62
           G PG   G  LR +Q++ A  S+ VMVT   F ++TAFC                   L+
Sbjct: 36  GMPGTTGGLILRLSQFVPALISVSVMVTTSDFRSATAFCC------------------LV 95

Query: 63  ASMGLQILWSFGLACLDLHALHMKKSLRNSVLLCLFAIGDWVVATLSLAAASSSAGVAIL 122
            ++ LQ LWS  L  +D +AL +++SLRN  ++  F IGD V +TL+ AAAS+SAG+ +L
Sbjct: 96  LAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGITVL 155

Query: 123 YSRDLNYCRSPLRISCSKIEISVAFAFVSWFLLAISSLVTFWLLGT 169
            + DL  C       C++ E + A AF+SWF ++ S ++ FW L T
Sbjct: 156 IN-DLGQCNVN---HCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

The following BLAST results are available for this feature:

BLAST of CmoCh04G030620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945M8	7.6e-38	51.48	CASP-like protein 5B2 OS=Arabidopsis thaliana OX=3702 GN=At3g53850 PE=2 SV=1	[more]
Q9LZM5	2.2e-37	51.20	CASP-like protein 5B1 OS=Arabidopsis thaliana OX=3702 GN=At5g02060 PE=2 SV=1	[more]
B8BD96	2.9e-37	50.30	CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 S...	[more]
Q6K478	2.9e-37	50.30	CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 P...	[more]
B6T990	8.5e-37	51.83	CASP-like protein 5B3 OS=Zea mays OX=4577 PE=2 SV=1	[more]

BLAST of CmoCh04G030620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GSN5	8.4e-72	89.35	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457076 PE=3 SV=1	[more]
A0A6J1JTC6	1.4e-71	88.76	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487666 PE=3 SV=1	[more]
A0A0A0K7M5	2.6e-65	82.25	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G008760 PE=3 SV=1	[more]
A0A1S3B3D0	2.6e-65	82.25	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103485526 PE=3 SV=1	[more]
A0A6J1C1V6	3.8e-64	80.47	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006665 PE=3 SV=1	[more]

BLAST of CmoCh04G030620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033333.1	3.2e-81	87.50	CASP-like protein 5B2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022954983.1	1.7e-71	89.35	CASP-like protein 5B2 [Cucurbita moschata] >KAG6602647.1 CASP-like protein 5B2, ...	[more]
XP_022990919.1	3.0e-71	88.76	CASP-like protein 5B2 [Cucurbita maxima]	[more]
XP_023518253.1	6.6e-71	88.76	CASP-like protein 5B1 [Cucurbita pepo subsp. pepo]	[more]
XP_038884812.1	8.3e-66	83.43	CASP-like protein 5B2 [Benincasa hispida]	[more]

BLAST of CmoCh04G030620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53850.1	5.4e-39	51.48	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	1.6e-38	51.20	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	4.8e-35	50.00	Uncharacterised protein family (UPF0497)	[more]
AT2G28370.1	6.9e-26	43.45	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	8.7e-21	37.95	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 4..154 e-value: 5.0E-21 score: 75.1
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 1..169
None	No IPR available	PANTHER	PTHR32021:SF24	CASP-LIKE PROTEIN	coord: 1..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G030620.1	CmoCh04G030620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane