CmoCh04G029800 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G029800
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	thioredoxin H4-1-like
Location	Cmo_Chr04: 21042787 .. 21044281 (-)
RNA-Seq Expression	CmoCh04G029800
Synteny	CmoCh04G029800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAACTGCTGGACTAAGGTAAGCCTGGCTGGAAGTTCATCTCTTTTCCTTGGTCGTATGTTTTCAGGGTCTTATATTGGATTTCTGTTGTATGCTCTCTGCTTTATTTTGTTTGCTAGCCCTGAAGTTTCTGATCGTCCTTTGTATATTTTGTTTTTATTCATCAAGTTCTTGGGTCACCTTGGGTCCATATAAGACATAACCAAGTGGAGGTTTGAGAGAAATAACACTTAGCTTCTGAGGATTCTTTATCGTTCAGAATCATGCAAGTCCACTAAATTTTCAGAGGATCAAAATTTCCCTCTTTAATTATCATATCTGAACTCTCTTTTTCTTAAAGATTTTTTAACAAATCTACTTTAAAGAGATTTATTGTGAAATTCTTATATGAAGTTCCACTTCCTTGTTCGCCGATAGTCAAGGTTGATTTATTCGACTTCCCCTTCATTTACATGATGTCAACGTTAAGTGTTGGAGTGTTACTGTTCAAGTTTTGGCAATCATCCTTGATACCCATAGTCTGAAAATTTCTTGAACGTGGTCCTCTTCTGATCATTAGATGCATGATTAGACCATAGGTTTTAATTTCTTTGTCATATCTTTAACGTTGTAAAATTGAGAACCGTGTTGTTTCAACCTGCTCAAATAAATTCTGTCTTCTAAGTGAGTTACATCCACACTTGACATTCTGTAGGTTTTCAGTAGTGATCAAGAAGACTATGCTGAAGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTGGGTCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCGACCAGAGATGGCAAGATTGTAAGTTTCTCCCTATATACTATTTCTTCAATGTGAGGATGACGAATGAATTTCTAGTCCACTCATTCATTTTTAAAACCTCGATCCTGTTCAAGTAAGGTGGTCTAGTCCTCTTAGTTTTTTGTGTTTGGCATTTAACAAATTCAGGATGTTTTTTTCTTTATATAAGTGAATCGTGAAGAAAAATATACAGAGTTCTTTTACCTTAAAACTATGGAACAGGTCATTGCAAATTTCAGTGCATCATGGAGTAGACCTTGTAAGTCCATGACGCCAGCATATTGTGAGCTTGCTGATAAGTATACTTCCATGGTGTTTTTGGCCATTGATGTCGATGAGCTAGCTGTAAGTAAAAACACGTTTTGGTTGCCCTTCGTTTATTTATATAAATTCGTGTTTTTAGAGGCGTTGAAGATGAGTATGAATCTAGCTCCCTAGTCCTAATTTAAACTAATAAGGGTCTAGCACTTTATTGTTTTCTATTGCGAATTGATTGGAAATTTCTTGGACTGATCTCAGGAGCTCAGTAAATCTTGGGACATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAACTGCAATGGATGAATCGGTAATGAAATCTCAGAGTTGA

mRNA sequence

ATGGGAAACTGCTGGACTAAGGTTTTCAGTAGTGATCAAGAAGACTATGCTGAAGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTGGGTCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCGACCAGAGATGGCAAGATTGTCATTGCAAATTTCAGTGCATCATGGAGTAGACCTTGTAAGTCCATGACGCCAGCATATTGTGAGCTTGCTGATAAGTATACTTCCATGGTGTTTTTGGCCATTGATGTCGATGAGCTAGCTGAGCTCAGTAAATCTTGGGACATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAACTGCAATGGATGAATCGGTAATGAAATCTCAGAGTTGA

Coding sequence (CDS)

ATGGGAAACTGCTGGACTAAGGTTTTCAGTAGTGATCAAGAAGACTATGCTGAAGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTGGGTCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCGACCAGAGATGGCAAGATTGTCATTGCAAATTTCAGTGCATCATGGAGTAGACCTTGTAAGTCCATGACGCCAGCATATTGTGAGCTTGCTGATAAGTATACTTCCATGGTGTTTTTGGCCATTGATGTCGATGAGCTAGCTGAGCTCAGTAAATCTTGGGACATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAACTGCAATGGATGAATCGGTAATGAAATCTCAGAGTTGA

Protein sequence

MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKITAMDESVMKSQS

Homology

[Close]

BLAST of CmoCh04G029800 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.0e-35
Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MG C  K      +D   ++ +   NVHLI + E+W+ KL EA+RDGKIV+ANFSA W  
Sbjct: 1   MGLCLAKRNHDADDDEPHIE-LAGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCG 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PCK + P Y EL++ Y S++FL IDVDEL++ S SW+IKATPTF F +DG+QVDKLVGA+
Sbjct: 61  PCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGAN 120

Query: 121 KSDLQQKITAMDESVMKS 139
           K +L +KITA+ +S+  S
Sbjct: 121 KPELHKKITAILDSLPPS 137

[Close]

BLAST of CmoCh04G029800 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-35
Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVD--SKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASW 60
           MG+C +K    D      V NV+    NVHLI + E W+ KL EA RDGKIV+ANFSA+W
Sbjct: 1   MGSCVSKGKGDDD----SVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATW 60

Query: 61  SRPCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVG 120
             PCK + P + EL++K++S++FL +DVDEL++ S SWDIKATPTF F K+G+Q+ KLVG
Sbjct: 61  CGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVG 120

Query: 121 ADKSDLQQKITAMDESVMKS 139
           A+K +LQ+K+T++ +SV +S
Sbjct: 121 ANKPELQKKVTSIIDSVPES 136

[Close]

BLAST of CmoCh04G029800 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-33
Identity = 69/134 (51.49%), Postives = 94/134 (70.15%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MG+C  K   SD+ED  + +     NVH+I + E W+ K+ EA +DGKIVIANFSA+W  
Sbjct: 1   MGSCVGKE-RSDEEDKIDFK---GGNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCG 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PC+ + P Y E++  Y   +FL IDVDEL + S SWDI+ATPTF F K+G QVDKLVGA+
Sbjct: 61  PCRVIAPVYAEMSQTYPQFMFLTIDVDELMDFSSSWDIRATPTFFFLKNGEQVDKLVGAN 120

Query: 121 KSDLQQKITAMDES 135
           K +L++K+ A+ +S
Sbjct: 121 KPELEKKVAALADS 130

[Close]

BLAST of CmoCh04G029800 vs. ExPASy Swiss-Prot
Match: Q0DKF1 (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-31
Identity = 65/131 (49.62%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MG C  K     +ED  + +     NVH+I S E W+ K+ EA +DGKIV+ANFSASW  
Sbjct: 1   MGGCVGKGRRHIEEDKLDFK---GGNVHVITSKEDWDRKIEEANKDGKIVVANFSASWCG 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PC+ + P Y E++  Y  ++FL IDVD+L + S SWDI+ATPTF F K+ +QVDKLVGA+
Sbjct: 61  PCRVIAPIYAEMSKTYPQLMFLTIDVDDLMDFSSSWDIRATPTFFFIKNEKQVDKLVGAN 120

Query: 121 KSDLQQKITAM 132
           K +L++K+ A+
Sbjct: 121 KPELEKKVQAL 128

[Close]

BLAST of CmoCh04G029800 vs. ExPASy Swiss-Prot
Match: Q8GXV2 (Thioredoxin-like protein CXXS2 OS=Arabidopsis thaliana OX=3702 GN=CXXS2 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.3e-30
Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 27  VHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAYCELADKYTSMVFLAIDV 86
           VH +  MEKWE K+ EA   GKI++ NF ASW  P K++ P Y ELA  YTSM+F+ IDV
Sbjct: 42  VHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYTSMIFVTIDV 101

Query: 87  DELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKITA 131
           +ELAE S  W++ ATPT VF KDGRQ+DKLVG D ++LQ+K  A
Sbjct: 102 EELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGDAAELQKKTAA 145

[Close]

BLAST of CmoCh04G029800 vs. ExPASy TrEMBL
Match: A0A6J1JH67 (thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.7e-70
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR
Sbjct: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKITAMDES 135
           KSDLQQKITAMDES
Sbjct: 121 KSDLQQKITAMDES 134

[Close]

BLAST of CmoCh04G029800 vs. ExPASy TrEMBL
Match: A0A6J1H8J4 (thioredoxin H4-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461044 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.7e-70
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR
Sbjct: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKITAMDES 135
           KSDLQQKITAMDES
Sbjct: 121 KSDLQQKITAMDES 134

[Close]

BLAST of CmoCh04G029800 vs. ExPASy TrEMBL
Match: A0A0A0KUM3 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.8e-65
Identity = 125/134 (93.28%), Postives = 127/134 (94.78%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MGNCWTK+F+S QEDYAEVQNVDSKNVHLI SMEKWEAKLLEAT DGKIVIANFSA W R
Sbjct: 1   MGNCWTKLFNSGQEDYAEVQNVDSKNVHLITSMEKWEAKLLEATEDGKIVIANFSAHWCR 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PCKSMTPAYCELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKLVGAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKITAMDES 135
           KSDLQQKI AMDES
Sbjct: 121 KSDLQQKIAAMDES 134

[Close]

BLAST of CmoCh04G029800 vs. ExPASy TrEMBL
Match: A0A1S3CBI4 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.8e-64
Identity = 124/134 (92.54%), Postives = 127/134 (94.78%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MGNCWTK+F+S QEDY EVQNVDSKNVHLI SMEKWEAKLLEAT+DGKIVIANFSA W R
Sbjct: 1   MGNCWTKLFNSAQEDYREVQNVDSKNVHLITSMEKWEAKLLEATQDGKIVIANFSAHWCR 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PCKSMTPAYCELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKLVGAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKITAMDES 135
           KSDLQQKI AMDES
Sbjct: 121 KSDLQQKIAAMDES 134

[Close]

BLAST of CmoCh04G029800 vs. ExPASy TrEMBL
Match: A0A6J1JRL7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111489170 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.1e-60
Identity = 114/134 (85.07%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MG+CWTK+F+SDQ+D A  + VDSKNVHLI S+EKWEAKL EAT+DGKIV+ANFSA W R
Sbjct: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120

Query: 121 KSDLQQKITAMDES 135
           KSDLQQKI AMDE+
Sbjct: 121 KSDLQQKIAAMDEA 134

[Close]

BLAST of CmoCh04G029800 vs. NCBI nr
Match: KAG6602571.1 (hypothetical protein SDJN03_07804, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.4 bits (703), Expect = 2.7e-70
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR
Sbjct: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKITAMDESV 136
           KSDLQQKITAMDES+
Sbjct: 121 KSDLQQKITAMDESL 135

[Close]

BLAST of CmoCh04G029800 vs. NCBI nr
Match: KAG7033249.1 (hypothetical protein SDJN02_07303, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275.4 bits (703), Expect = 2.7e-70
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR
Sbjct: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKITAMDESV 136
           KSDLQQKITAMDES+
Sbjct: 121 KSDLQQKITAMDESL 135

[Close]

BLAST of CmoCh04G029800 vs. NCBI nr
Match: XP_022960245.1 (thioredoxin H4-1-like [Cucurbita moschata] >XP_023553289.1 thioredoxin H4-1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.0 bits (702), Expect = 3.5e-70
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR
Sbjct: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKITAMDES 135
           KSDLQQKITAMDES
Sbjct: 121 KSDLQQKITAMDES 134

[Close]

BLAST of CmoCh04G029800 vs. NCBI nr
Match: XP_022989932.1 (thioredoxin H4-1-like [Cucurbita maxima])

HSP 1 Score: 275.0 bits (702), Expect = 3.5e-70
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR
Sbjct: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKITAMDES 135
           KSDLQQKITAMDES
Sbjct: 121 KSDLQQKITAMDES 134

[Close]

BLAST of CmoCh04G029800 vs. NCBI nr
Match: XP_038890472.1 (thioredoxin H4-1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 263.8 bits (673), Expect = 8.2e-67
Identity = 130/140 (92.86%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60
           MGNCWTK F+S QEDYAEVQNVDSKNVHLI SMEKWEAKLLEAT+DGKIVIANFSA W R
Sbjct: 1   MGNCWTKFFNSVQEDYAEVQNVDSKNVHLITSMEKWEAKLLEATKDGKIVIANFSAPWCR 60

Query: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120
           PCKSMTPAYCELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKLVGAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKITAMDESVMKSQS 141
           KSDLQQKI AMDESV+KSQS
Sbjct: 121 KSDLQQKIAAMDESVIKSQS 140

[Close]

BLAST of CmoCh04G029800 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 )

HSP 1 Score: 150.6 bits (379), Expect = 9.4e-37
Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVD--SKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASW 60
           MG+C +K    D      V NV+    NVHLI + E W+ KL EA RDGKIV+ANFSA+W
Sbjct: 1   MGSCVSKGKGDDD----SVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATW 60

Query: 61  SRPCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVG 120
             PCK + P + EL++K++S++FL +DVDEL++ S SWDIKATPTF F K+G+Q+ KLVG
Sbjct: 61  CGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVG 120

Query: 121 ADKSDLQQKITAMDESVMKS 139
           A+K +LQ+K+T++ +SV +S
Sbjct: 121 ANKPELQKKVTSIIDSVPES 136

[Close]

BLAST of CmoCh04G029800 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 )

HSP 1 Score: 150.6 bits (379), Expect = 9.4e-37
Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 1   MGNCWTKVFSSDQEDYAEVQNVD--SKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASW 60
           MG+C +K    D      V NV+    NVHLI + E W+ KL EA RDGKIV+ANFSA+W
Sbjct: 1   MGSCVSKGKGDDD----SVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATW 60

Query: 61  SRPCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVG 120
             PCK + P + EL++K++S++FL +DVDEL++ S SWDIKATPTF F K+G+Q+ KLVG
Sbjct: 61  CGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVG 120

Query: 121 ADKSDLQQKITAMDESVMKS 139
           A+K +LQ+K+T++ +SV +S
Sbjct: 121 ANKPELQKKVTSIIDSVPES 136

[Close]

BLAST of CmoCh04G029800 vs. TAIR 10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2 )

HSP 1 Score: 131.7 bits (330), Expect = 4.5e-31
Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 27  VHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAYCELADKYTSMVFLAIDV 86
           VH +  MEKWE K+ EA   GKI++ NF ASW  P K++ P Y ELA  YTSM+F+ IDV
Sbjct: 42  VHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYTSMIFVTIDV 101

Query: 87  DELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKITA 131
           +ELAE S  W++ ATPT VF KDGRQ+DKLVG D ++LQ+K  A
Sbjct: 102 EELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGDAAELQKKTAA 145

[Close]

BLAST of CmoCh04G029800 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 4.5e-31
Identity = 58/111 (52.25%), Postives = 79/111 (71.17%), Query Frame = 0


Query: 20  QNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAYCELADKYTSM 79
           Q+     VH +  +EKWE K+ EA   GKI++ NFSA W  PCK + P + +LA +Y SM
Sbjct: 35  QHGSKGKVHPVSRIEKWEEKITEANNHGKILVVNFSAPWCVPCKKIEPVFRDLASRYPSM 94

Query: 80  VFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKITA 131
           +F+ +DV+ELAE S  W+++ATPT VF KDGRQ+DKLVGA+ S+LQ+K  A
Sbjct: 95  IFVTVDVEELAEFSNEWNVEATPTVVFLKDGRQMDKLVGAETSELQKKTAA 145

[Close]

BLAST of CmoCh04G029800 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 99.0 bits (245), Expect = 3.2e-21
Identity = 46/125 (36.80%), Postives = 80/125 (64.00%), Query Frame = 0


Query: 10  SSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAY 69
           + ++E  A + + +  ++H   S  + EAK   A +  +++I  F+A+W  PC+ M+P Y
Sbjct: 258 AQEREAQAALNDGEVISIH---STSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLY 317

Query: 70  CELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKIT 129
             LA +++ +VFL +D+D+  +++ SW+I + PTF F +DG++VDK+VGADK  L+QKI 
Sbjct: 318 SNLATQHSRVVFLKVDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIA 377

Query: 130 AMDES 135
               S
Sbjct: 378 QHSSS 379

The following BLAST results are available for this feature:

BLAST of CmoCh04G029800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P85801	1.0e-35	53.62	Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1	[more]
Q9C9Y6	1.3e-35	52.86	Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1	[more]
Q9AS75	1.2e-33	51.49	Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 S...	[more]
Q0DKF1	1.5e-31	49.62	Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 S...	[more]
Q8GXV2	6.3e-30	57.69	Thioredoxin-like protein CXXS2 OS=Arabidopsis thaliana OX=3702 GN=CXXS2 PE=2 SV=...	[more]

BLAST of CmoCh04G029800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JH67	1.7e-70	100.00	thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1	[more]
A0A6J1H8J4	1.7e-70	100.00	thioredoxin H4-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461044 PE=4 SV=1	[more]
A0A0A0KUM3	4.8e-65	93.28	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140...	[more]
A0A1S3CBI4	1.8e-64	92.54	thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1	[more]
A0A6J1JRL7	6.1e-60	85.07	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111489170 PE=4 SV=1	[more]

BLAST of CmoCh04G029800 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602571.1	2.7e-70	99.26	hypothetical protein SDJN03_07804, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7033249.1	2.7e-70	99.26	hypothetical protein SDJN02_07303, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022960245.1	3.5e-70	100.00	thioredoxin H4-1-like [Cucurbita moschata] >XP_023553289.1 thioredoxin H4-1-like...	[more]
XP_022989932.1	3.5e-70	100.00	thioredoxin H4-1-like [Cucurbita maxima]	[more]
XP_038890472.1	8.2e-67	92.86	thioredoxin H4-1-like isoform X2 [Benincasa hispida]	[more]

BLAST of CmoCh04G029800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08710.1	9.4e-37	52.86	thioredoxin H-type 9	[more]
AT3G08710.2	9.4e-37	52.86	thioredoxin H-type 9	[more]
AT2G40790.1	4.5e-31	57.69	C-terminal cysteine residue is changed to a serine 2	[more]
AT3G56420.1	4.5e-31	52.25	Thioredoxin superfamily protein	[more]
AT3G17880.1	3.2e-21	36.80	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..139 e-value: 1.6E-38 score: 133.4
None	No IPR available	PANTHER	PTHR10438:SF394	THIOREDOXIN-LIKE PROTEIN CXXS2-RELATED	coord: 10..134
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 10..134
None	No IPR available	CDD	cd02947	TRX_family	coord: 40..128 e-value: 4.76347E-29 score: 99.94
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 34..129 e-value: 2.7E-20 score: 72.3
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 8..133 score: 12.329744
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 23..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G029800.1	CmoCh04G029800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane