CmoCh04G029760 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTTCTACTCTCTCGGCATCCAAACACCAAAATCAGGGATCGAAATCGTCGTCGATGGCAGCTCTGCGAGCAGTTTCCAACTCTGTGAGATTAGCCTGTGCGAATCCGAGTAATTCCTCTATTAATCGGCCTGTTTCCGTCAAGCTTTCCGCTCCATTGTTCACTCAGAGCTCCAAGCTCTTTTCCGCTCCCAAGAATCTGAGTTTCTTCGCGCATGGAAGATCGGTCGCTTGCCGTAGCCAGGCTAGCGCCTCTGATTCTTCTCCTAATCCAAGTGAGTTTTTAGGTTTTTGCAATGAATTTACATTCGGTTTTGAGCATCTATGTGGATTTTGATCTTTCCTTTGGTTTCTGTAGGTAGAGTTCAGGAATTATACGTTTATGAAATCAACGAGAGGGATCGTCAAAGTCCTGCGTATCTTAGGTTAAGCCAGAAGAATACAAATGCGCTTGGCGATCTGGTTCCTTTCACTAACAAAGTAAGTGAACTTTCTTATCTGTCATTTTCTATGCTTTCAATTTGCATTCACGTTATCAATTTTAAGTCGTGTTGCTTCTGGAGAAACTACTGGATCTTATCTATAGAGAATTCAGTTTTCTGAGAGATTAAATTGACCAGAATGCTTAGATTCATAGTTTTTAATTCTTCTCGGGAAGATTTTTTTTTCTCTACTTGGCGCCATTGAAAATCAAAGGATTTCTGTCTCTTTGGCGCCCTTTGCCTCTTTTGGTGTTTGTCCTAACTTCAGTCCATTTTGAGTCTAAGCACTTTACTTTTTGGTCTCTCCAAAAGTCTTCGTATCAACAGAGATAATGTTTCGTAACTATAATTCTAAGATATTTTTCATATAGTCTGGGGAATGTGGGACTCCTCCCTCAAAAATCTTCTTCTCGAATAAAGTATATCACAAAGCTTCTCTTGGAGTCTATAGAACCCTTGAACAACCTCCTCTCAATTGAGACTCTATTTTTTCTCTAGAACTTTCAGTAAACAATTTGTTCCACACTTCAACTACTCTTGAATAAATCAGAAGCTTATGGAACTCTCAAACAACCTTCTCTCAATTGAGGCTGGGCTAATTCTTTAGAACCTTCCAACAAAAAGTACACAATTTATTTGATACTTGAGTCATTTTTGGCTAAAATTTCAAGACTCATAACTTCATTGTTGGATACTTGAGGATTCTATATACATGGTTTAGTTAAGGCATGACTTTGATACCATGTTAGAAATCATAAATATCCACAATGATATGATATTGCTTACTTTAAGCATAAATTCTTATAACTTTACTTTTGATTTACTCAAAAAATTTCATACGAATGGAGATGATATTTTTTACTTATAGATTCATAAATTTTCCCTTCTGGTCAATAATAGATACGAGACTCTTCTAAAGAATATGTTCATCATTCTTAGGACCTGATTAGTTGGAGGTTTTTCTTGGATGAATAAGCATAAACAAGCAAAAGTCATCATTCATCATCTCTTCCTGTTTCGAAGGTTTTAACTATTCTAAAAAAAAAGTAATATAATTAATTATTTAATTTTATAAATCAATAAGAAGCACGTTCATAATGATTAATGAATAGTGTATTAATTAATTATTGTTCAAAATATAAAAAATCATTACAGCTATACACTGGAGACCTGCAAAAACGGGTAGGAATTACAGCGGGGCTATGCATATTGGTGCAAAACAAACCTGAAAAGAAAGGTGACCATTACGAGGCCATCTACAGCTTTTACTTTGGGGACTACGGTCACATAGCGGTGCAGGGGCCATACCTCACCTATGAGGACACGTATCTGGCTGTGACTGGCGGGTCAGGAATCTTCGAAGGTGTGACGGGTCAGGTTAAGCTGCAGCAGATAATTTTCCCCTTCAAGCTTTTCTATACCTTCTACTTGAAGGGCATTAGGGAGTTGCCCGCAGAACTTTCTGTGAAGCCCACCGAGCCCGGCCCAGCTGCTGAGCCCAGCCCAAATGCCAAGGCCTGTCACCCACAAGCCACCATTCCTGGTTTCACTAACTAGGGTAGGGTTAGTGAGTGGAGCACTAATTGATTAATGGTGGGAGATTTGATGAAACAGAAAATCGAAAGCGATAATAATGTTAAAAGAGAATGGGCAAACATAGTGAAAGGGACGAAAGGAAAATGTCAACATAGTGGATGGGAATCACAAATAGATTGATGCAATCAAAGATATTATGCCCGCCATTTCTTCAACGTTGTAGAATAACTGTTGTCTTCAACTTACTCTTTTGTTATTATCATTATTGTTGTTATTTTTATTTTATTTTTTAATATTAATGCCCGAACATGCTTACCCCGCCATTGCTGAAACCATTTATGATGGCCCATTCTTTTTATATATTTCTTCGACTTCTGTTAAAACTCATTTTACTTCGTTTTAATAGATATTTGGGTGGTACGATATCTCTATTTGAGTATGAAATTTACTTTGTTGTCTAAATAAAATTTCAGTGGAAGAACAATCGATCAT CTCTTCTACTCTCTCGGCATCCAAACACCAAAATCAGGGATCGAAATCGTCGTCGATGGCAGCTCTGCGAGCAGTTTCCAACTCTGTGAGATTAGCCTGTGCGAATCCGAGTAATTCCTCTATTAATCGGCCTGTTTCCGTCAAGCTTTCCGCTCCATTGTTCACTCAGAGCTCCAAGCTCTTTTCCGCTCCCAAGAATCTGAGTTTCTTCGCGCATGGAAGATCGGTCGCTTGCCGTAGCCAGGCTAGCGCCTCTGATTCTTCTCCTAATCCAAGTAGAGTTCAGGAATTATACGTTTATGAAATCAACGAGAGGGATCGTCAAAGTCCTGCGTATCTTAGGTTAAGCCAGAAGAATACAAATGCGCTTGGCGATCTGGTTCCTTTCACTAACAAACTATACACTGGAGACCTGCAAAAACGGGTAGGAATTACAGCGGGGCTATGCATATTGGTGCAAAACAAACCTGAAAAGAAAGGTGACCATTACGAGGCCATCTACAGCTTTTACTTTGGGGACTACGGTCACATAGCGGTGCAGGGGCCATACCTCACCTATGAGGACACGTATCTGGCTGTGACTGGCGGGTCAGGAATCTTCGAAGGTGTGACGGGTCAGGTTAAGCTGCAGCAGATAATTTTCCCCTTCAAGCTTTTCTATACCTTCTACTTGAAGGGCATTAGGGAGTTGCCCGCAGAACTTTCTGTGAAGCCCACCGAGCCCGGCCCAGCTGCTGAGCCCAGCCCAAATGCCAAGGCCTGTCACCCACAAGCCACCATTCCTGGTTTCACTAACTAGGGTAGGGTTAGTGAGTGGAGCACTAATTGATTAATGGTGGGAGATTTGATGAAACAGAAAATCGAAAGCGATAATAATGTTAAAAGAGAATGGGCAAACATAGTGAAAGGGACGAAAGGAAAATGTCAACATAGTGGATGGGAATCACAAATAGATTGATGCAATCAAAGATATTATGCCCGCCATTTCTTCAACGTTGTAGAATAACTGTTGTCTTCAACTTACTCTTTTGTTATTATCATTATTGTTGTTATTTTTATTTTATTTTTTAATATTAATGCCCGAACATGCTTACCCCGCCATTGCTGAAACCATTTATGATGGCCCATTCTTTTTATATATTTCTTCGACTTCTGTTAAAACTCATTTTACTTCGTTTTAATAGATATTTGGGTGGTACGATATCTCTATTTGAGTATGAAATTTACTTTGTTGTCTAAATAAAATTTCAGTGGAAGAACAATCGATCAT ATGGCAGCTCTGCGAGCAGTTTCCAACTCTGTGAGATTAGCCTGTGCGAATCCGAGTAATTCCTCTATTAATCGGCCTGTTTCCGTCAAGCTTTCCGCTCCATTGTTCACTCAGAGCTCCAAGCTCTTTTCCGCTCCCAAGAATCTGAGTTTCTTCGCGCATGGAAGATCGGTCGCTTGCCGTAGCCAGGCTAGCGCCTCTGATTCTTCTCCTAATCCAAGTAGAGTTCAGGAATTATACGTTTATGAAATCAACGAGAGGGATCGTCAAAGTCCTGCGTATCTTAGGTTAAGCCAGAAGAATACAAATGCGCTTGGCGATCTGGTTCCTTTCACTAACAAACTATACACTGGAGACCTGCAAAAACGGGTAGGAATTACAGCGGGGCTATGCATATTGGTGCAAAACAAACCTGAAAAGAAAGGTGACCATTACGAGGCCATCTACAGCTTTTACTTTGGGGACTACGGTCACATAGCGGTGCAGGGGCCATACCTCACCTATGAGGACACGTATCTGGCTGTGACTGGCGGGTCAGGAATCTTCGAAGGTGTGACGGGTCAGGTTAAGCTGCAGCAGATAATTTTCCCCTTCAAGCTTTTCTATACCTTCTACTTGAAGGGCATTAGGGAGTTGCCCGCAGAACTTTCTGTGAAGCCCACCGAGCCCGGCCCAGCTGCTGAGCCCAGCCCAAATGCCAAGGCCTGTCACCCACAAGCCACCATTCCTGGTTTCACTAACTAG MAALRAVSNSVRLACANPSNSSINRPVSVKLSAPLFTQSSKLFSAPKNLSFFAHGRSVACRSQASASDSSPNPSRVQELYVYEINERDRQSPAYLRLSQKNTNALGDLVPFTNKLYTGDLQKRVGITAGLCILVQNKPEKKGDHYEAIYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVTGQVKLQQIIFPFKLFYTFYLKGIRELPAELSVKPTEPGPAAEPSPNAKACHPQATIPGFTN Homology
BLAST of CmoCh04G029760 vs. ExPASy Swiss-Prot
Match: A2XID3 (Allene oxide cyclase, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=AOC PE=2 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 2.0e-71 Identity = 129/187 (68.98%), Postives = 151/187 (80.75%), Query Frame = 0
BLAST of CmoCh04G029760 vs. ExPASy Swiss-Prot
Match: Q75KD7 (Allene oxide cyclase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=AOC PE=1 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 2.0e-71 Identity = 129/187 (68.98%), Postives = 151/187 (80.75%), Query Frame = 0
BLAST of CmoCh04G029760 vs. ExPASy Swiss-Prot
Match: Q93ZC5 (Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AOC4 PE=2 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 1.4e-64 Identity = 120/186 (64.52%), Postives = 148/186 (79.57%), Query Frame = 0
BLAST of CmoCh04G029760 vs. ExPASy Swiss-Prot
Match: Q9LS02 (Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AOC2 PE=1 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 5.9e-63 Identity = 123/207 (59.42%), Postives = 152/207 (73.43%), Query Frame = 0
BLAST of CmoCh04G029760 vs. ExPASy Swiss-Prot
Match: Q9LS03 (Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AOC1 PE=1 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 7.7e-63 Identity = 116/187 (62.03%), Postives = 142/187 (75.94%), Query Frame = 0
BLAST of CmoCh04G029760 vs. ExPASy TrEMBL
Match: A0A6J1GWN4 (Allene-oxide cyclase OS=Cucurbita moschata OX=3662 GN=LOC111458193 PE=3 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 3.5e-135 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of CmoCh04G029760 vs. ExPASy TrEMBL
Match: A0A6J1JLJ4 (Allene-oxide cyclase OS=Cucurbita maxima OX=3661 GN=LOC111486971 PE=3 SV=1) HSP 1 Score: 479.6 bits (1233), Expect = 8.1e-132 Identity = 243/247 (98.38%), Postives = 244/247 (98.79%), Query Frame = 0
BLAST of CmoCh04G029760 vs. ExPASy TrEMBL
Match: A0A6J1FEY8 (Allene-oxide cyclase OS=Cucurbita moschata OX=3662 GN=LOC111445098 PE=3 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115 Identity = 218/248 (87.90%), Postives = 228/248 (91.94%), Query Frame = 0
BLAST of CmoCh04G029760 vs. ExPASy TrEMBL
Match: A0A6J1C241 (Allene-oxide cyclase OS=Momordica charantia OX=3673 GN=LOC111006717 PE=3 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 1.8e-115 Identity = 216/247 (87.45%), Postives = 227/247 (91.90%), Query Frame = 0
BLAST of CmoCh04G029760 vs. ExPASy TrEMBL
Match: A0A6J1K285 (Allene-oxide cyclase OS=Cucurbita maxima OX=3661 GN=LOC111489456 PE=3 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 9.0e-115 Identity = 215/248 (86.69%), Postives = 228/248 (91.94%), Query Frame = 0
BLAST of CmoCh04G029760 vs. NCBI nr
Match: XP_022956471.1 (allene oxide cyclase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 490.7 bits (1262), Expect = 7.2e-135 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of CmoCh04G029760 vs. NCBI nr
Match: XP_023524890.1 (allene oxide cyclase, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 488.4 bits (1256), Expect = 3.6e-134 Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 0
BLAST of CmoCh04G029760 vs. NCBI nr
Match: KAG6602569.1 (Allene oxide cyclase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033246.1 Allene oxide cyclase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 486.9 bits (1252), Expect = 1.0e-133 Identity = 245/247 (99.19%), Postives = 245/247 (99.19%), Query Frame = 0
BLAST of CmoCh04G029760 vs. NCBI nr
Match: XP_022989931.1 (allene oxide cyclase, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131 Identity = 243/247 (98.38%), Postives = 244/247 (98.79%), Query Frame = 0
BLAST of CmoCh04G029760 vs. NCBI nr
Match: XP_022939096.1 (allene oxide cyclase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 425.6 bits (1093), Expect = 2.9e-115 Identity = 218/248 (87.90%), Postives = 228/248 (91.94%), Query Frame = 0
BLAST of CmoCh04G029760 vs. TAIR 10
Match: AT1G13280.1 (allene oxide cyclase 4 ) HSP 1 Score: 247.7 bits (631), Expect = 9.9e-66 Identity = 120/186 (64.52%), Postives = 148/186 (79.57%), Query Frame = 0
BLAST of CmoCh04G029760 vs. TAIR 10
Match: AT3G25770.1 (allene oxide cyclase 2 ) HSP 1 Score: 242.3 bits (617), Expect = 4.2e-64 Identity = 123/207 (59.42%), Postives = 152/207 (73.43%), Query Frame = 0
BLAST of CmoCh04G029760 vs. TAIR 10
Match: AT3G25780.1 (allene oxide cyclase 3 ) HSP 1 Score: 241.9 bits (616), Expect = 5.5e-64 Identity = 124/219 (56.62%), Postives = 155/219 (70.78%), Query Frame = 0
BLAST of CmoCh04G029760 vs. TAIR 10
Match: AT3G25760.1 (allene oxide cyclase 1 ) HSP 1 Score: 241.9 bits (616), Expect = 5.5e-64 Identity = 116/187 (62.03%), Postives = 142/187 (75.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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