CmoCh04G029440 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G029440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	E3 ubiquitin-protein ligase
Location	Cmo_Chr04: 20846871 .. 20848902 (-)
RNA-Seq Expression	CmoCh04G029440
Synteny	CmoCh04G029440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGCTGTCTGCTGCTGTTTGAGCATGGACGATTTTGAAGACTATGTCAATCCTAATAGTTCGGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAACGCCGTAAGCCCTATTTTCGTTGCATTTTTTGCGATTGTGTCACTGTGAAGGATGAAAATTTCGTTATTTCATAAATAACGTGTTTTGTTCGAATGCTAATAATGGTGAAAATTCGAAGAAAATGTTGCGAACATTAATGCTTCTCACTTCATTGTATGCCATTGTATTGTGTTATTTGTTTGCGTTTGTCTTTCCATATTTTCTTGCTTTATGATGCGCGCGTAAATAAATATATATGACCCATAACGCACATCAAATTATCATCTTCTTATGGAAAGCGCTTGTAAGTTGTTTCTCACGCGTCACAATTGTTTAGCTGTAGTTACAAACTTTGTTCTTATGATAATCGTATGACTCTGCTTTCCGTCTTATTTTCTCTAGTACACATTGATTTTTCGAAGAGGAGAAGTGCATCCTGTCTCTTCATCAATTCAAGGGGCGACATCCATGAGTTCTGCATCATCGACAGACAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCATTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGATTGATTTCGAGGCGCGAGAAGGGTTCAAGCCATTTACATGAGGAGTCAGAACCTCTAAGAGGTGAAGTAGATACAGATTCAGATTCTTTGGGCTCGGCAGGCAAATGGAATGGATCTGCTTGTCTTGACGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGATCCCATCAACTAAATCTACCACTGGAGCAGGGTATGCTTATACATCTTCGGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGGTCGATTTTTTTGATAACTTCATTTTATCCTTGATTTTATTTAATTGCTCATCAAAATCTATGATTTTGGCCCTCAATATTCTTGTTTTTTGAGCTTATAGGGGGATAAACAAGTTACTAATCCACACGTTTTTTGACATGCCGAAATTTTCATTCTGCTCGTTAAATTTTCTTTTTTTCCCTAGCAGAATATACCTCAGAGAATCCCAAGATAGTGACAAAATGCTGTCATCACTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGCCCAGTTTGTGGCAAGGTATGCCTCTTTTTCTCCATCATATCATATGAACTTGTTCAATCACTATCTCAAAGCCACCCTATTAGTTGCGTTCTAGTGACTCGGATTGATGTTCGGATCTTTTTATGTTTTGGAAGTTCTGTGTTTCGTAAGCGTCGCCATTATTTGGCAAAATATGACTTTATGATTTGACGCAATTGATTTTAAGATTAATATTTCTTGGTACTTTAGTATGGATTGAGCATAAGGACTATTCTGGATTTGCAGAACCATCGTGGTTCGTTTAGAAATTGAAAAAATGTCTAGTTAACATAGATGGTCTATACGATCCATTTATTTATGTCTACCCTATCCTTGTGTCATCTTCGCTCAGAACCGACTTATTAAGCTACGTTATAATAACTCCTATAAAAAAAAAAACTTGTAGAACATCAGAAGTTTAAGAGAACACATCATTTTTCTTTTTCTTATGTGCTTCTTAGAATGGGATCACTCAATTTCATTTTTTGTTTTTGTTGATAACCTGAGGGTTCTCAAGCTAACCTGGGGGCACCTACACCCGCCCCTAGGATTGAAACCCCATGTGACCTCTGGGTAGGTGTCGTGCGCCTTTTGCGGAGGGGCCACCCCTTGGGCACTTGTTGATCTCGTTTTGACGTAAATATTTATGCTTGATTGATACACTACACCATTTTGTGATATTCGATTGGTCGGGTAGTGCTTCGGCGTTTTTTGGTATAATAACTGATGTTCTTTTCCTCAGCTCCTTCACTGGTGAAGCTTTGGGGAATGATCTTGAAACGCGATCCTTAGATGCTCATCTCTAA

mRNA sequence

ATGGGTGCTGTCTGCTGCTGTTTGAGCATGGACGATTTTGAAGACTATGTCAATCCTAATAGTTCGGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAACGCCTACACATTGATTTTTCGAAGAGGAGAAGTGCATCCTGTCTCTTCATCAATTCAAGGGGCGACATCCATGAGTTCTGCATCATCGACAGACAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCATTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGATTGATTTCGAGGCGCGAGAAGGGTTCAAGCCATTTACATGAGGAGTCAGAACCTCTAAGAGGTGAAGTAGATACAGATTCAGATTCTTTGGGCTCGGCAGGCAAATGGAATGGATCTGCTTGTCTTGACGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGATCCCATCAACTAAATCTACCACTGGAGCAGGGTATGCTTATACATCTTCGGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGAATATACCTCAGAGAATCCCAAGATAGTGACAAAATGCTGTCATCACTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGCCCAGTTTGTGGCAAGGTGTCGTGCGCCTTTTGCGGAGGGGCCACCCCTTGGGCACTTGTTGATCTCGTTTTGACCTCCTTCACTGGTGAAGCTTTGGGGAATGATCTTGAAACGCGATCCTTAGATGCTCATCTCTAA

Coding sequence (CDS)

ATGGGTGCTGTCTGCTGCTGTTTGAGCATGGACGATTTTGAAGACTATGTCAATCCTAATAGTTCGGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAACGCCTACACATTGATTTTTCGAAGAGGAGAAGTGCATCCTGTCTCTTCATCAATTCAAGGGGCGACATCCATGAGTTCTGCATCATCGACAGACAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCATTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGATTGATTTCGAGGCGCGAGAAGGGTTCAAGCCATTTACATGAGGAGTCAGAACCTCTAAGAGGTGAAGTAGATACAGATTCAGATTCTTTGGGCTCGGCAGGCAAATGGAATGGATCTGCTTGTCTTGACGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGATCCCATCAACTAAATCTACCACTGGAGCAGGGTATGCTTATACATCTTCGGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGAATATACCTCAGAGAATCCCAAGATAGTGACAAAATGCTGTCATCACTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGCCCAGTTTGTGGCAAGGTGTCGTGCGCCTTTTGCGGAGGGGCCACCCCTTGGGCACTTGTTGATCTCGTTTTGACCTCCTTCACTGGTGAAGCTTTGGGGAATGATCTTGAAACGCGATCCTTAGATGCTCATCTCTAA

Protein sequence

MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGATSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRGEVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVSCAFCGGATPWALVDLVLTSFTGEALGNDLETRSLDAHL

Homology

[Close]

BLAST of CmoCh04G029440 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.6e-71
Identity = 138/228 (60.53%), Postives = 162/228 (71.05%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MG V  C  ++D ++Y+NPNSSVYRNC C+ C   NFLN Y  +FRRGE   + SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
            S++S+SS DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH HEE EPLR 
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 121 EVDTDSDSLGSAG-KW-NGSACL---DESKENLGKSSLKIPSTKSTT---GAGYAYTSSE 180
           + D DS+S G  G KW N  + L   D  +E   KSSL+I  ++S +    +   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 181 DEDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 221
           DEDVCPTCLEEYTSENPKIVTKC HHFHL CIYEWMERS+NCPVCGKV
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKV 224

[Close]

BLAST of CmoCh04G029440 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.0e-14
Identity = 45/106 (42.45%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 124 TDSDSLGSAGKWNGSA------C--LDESKENLGKSSLKIPSTKS--TTGAGYAYTSSED 183
           TDS+S+   G+ +GS+      C  L ES      SS+ +   KS  +   G      E+
Sbjct: 78  TDSESI--KGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFSKHQGLKILVDEE 137

Query: 184 EDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGK 220
           ED CP C E+Y  ENP++ TKC H FHL C+ EW+ERSD CP+C K
Sbjct: 138 EDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 181

[Close]

BLAST of CmoCh04G029440 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.5e-13
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 175 DVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGK 220
           D CP CLEEY  +NPK++TKC H FHL CI  WMERS+ CPVC K
Sbjct: 102 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDK 146

[Close]

BLAST of CmoCh04G029440 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.1e-09
Identity = 29/76 (38.16%), Postives = 42/76 (55.26%), Query Frame = 0


Query: 147 NLGKSSLKIPSTKSTTGAGYAYTSSED-----EDVCPTCLEEYTSENPKIVTKCCHHFHL 206
           NL  +S   P+  S++ +  A   + D     +D C  CLE +T ++P  VT C H +HL
Sbjct: 11  NLSDNSPFNPAIGSSSSSSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHL 70

Query: 207 GCIYEWMERSDNCPVC 218
            CI EW +RS  CP+C
Sbjct: 71  QCIIEWSQRSKECPIC 86

[Close]

BLAST of CmoCh04G029440 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.7e-08
Identity = 23/59 (38.98%), Postives = 33/59 (55.93%), Query Frame = 0


Query: 161 TTGAGYAYTSSED--EDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVC 218
           T+ A +     +D  +D C  CLE +   +P  +T C H +HL CI EW +RS  CP+C
Sbjct: 15  TSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMC 73

[Close]

BLAST of CmoCh04G029440 vs. ExPASy TrEMBL
Match: A0A6J1GR85 (E3 ubiquitin-protein ligase At3g02290 OS=Cucurbita moschata OX=3662 GN=LOC111456789 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.5e-125
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 221
           LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV
Sbjct: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 220

[Close]

BLAST of CmoCh04G029440 vs. ExPASy TrEMBL
Match: A0A6J1JPB8 (E3 ubiquitin-protein ligase At3g02290 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487128 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 1.0e-124
Identity = 218/220 (99.09%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDS+SLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSESLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 221
           LEEYTSENPKI+TKCCHHFHLGCIYEWMERSDNCPVCGKV
Sbjct: 181 LEEYTSENPKILTKCCHHFHLGCIYEWMERSDNCPVCGKV 220

[Close]

BLAST of CmoCh04G029440 vs. ExPASy TrEMBL
Match: A0A1S3CA28 (E3 ubiquitin-protein ligase At3g02290 OS=Cucumis melo OX=3656 GN=LOC103498549 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.6e-117
Identity = 205/219 (93.61%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLS++DFEDYVNPNSSVYRNCTCLSCFIQ+FLNAYTLIFRRGEVH VSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSM+S +STDNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGSAGKWNGSACL+ESKENLGKSSLK PSTKST+G GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGK 220
           LEEYTSENPKIVTKC HHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of CmoCh04G029440 vs. ExPASy TrEMBL
Match: A0A0A0KSH8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G642120 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.2e-115
Identity = 203/219 (92.69%), Postives = 211/219 (96.35%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLS++DFEDYVNPNSSVYRNCTCLSCFIQ+FLNAYTLIFRRGEVH VSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSM+S +STDNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGS GK NGSACL+ESKENLGKSSLK PSTKST+G GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGK 220
           LEEYTSENPKIVTKC HHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of CmoCh04G029440 vs. ExPASy TrEMBL
Match: A0A6J1BYQ7 (E3 ubiquitin-protein ligase At3g02290 OS=Momordica charantia OX=3673 GN=LOC111006466 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.2e-115
Identity = 200/220 (90.91%), Postives = 210/220 (95.45%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLS++D+EDYVNPNSS+YRNCTCLSCFIQNFLNAYTLIFRRGEVH VSSSIQG 
Sbjct: 1   MGAVCCCLSVEDYEDYVNPNSSLYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGT 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSM+S +STDNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVD DSDSL + GKWNGSACLDESKENLGKSSLK PSTKSTTG GYAYTSSEDEDVCPTC
Sbjct: 121 EVDADSDSLDTPGKWNGSACLDESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 221
           LEEYTSENPKI+T+C HHFHLGCIYEWMERSDNCPVCGKV
Sbjct: 181 LEEYTSENPKIMTQCSHHFHLGCIYEWMERSDNCPVCGKV 220

[Close]

BLAST of CmoCh04G029440 vs. NCBI nr
Match: KAG7033220.1 (E3 ubiquitin-protein ligase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 459.1 bits (1180), Expect = 2.4e-125
Identity = 222/224 (99.11%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVSCAF 225
           LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV C F
Sbjct: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV-CLF 223

[Close]

BLAST of CmoCh04G029440 vs. NCBI nr
Match: XP_022954554.1 (E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_022954561.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_022954569.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_023548844.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >XP_023548852.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >XP_023548861.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >XP_023548868.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >KAG6602542.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 458.8 bits (1179), Expect = 3.2e-125
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 221
           LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV
Sbjct: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 220

[Close]

BLAST of CmoCh04G029440 vs. NCBI nr
Match: XP_022990150.1 (E3 ubiquitin-protein ligase At3g02290 isoform X1 [Cucurbita maxima] >XP_022990152.1 E3 ubiquitin-protein ligase At3g02290 isoform X1 [Cucurbita maxima] >XP_022990153.1 E3 ubiquitin-protein ligase At3g02290 isoform X1 [Cucurbita maxima] >XP_022990154.1 E3 ubiquitin-protein ligase At3g02290 isoform X1 [Cucurbita maxima])

HSP 1 Score: 456.1 bits (1172), Expect = 2.1e-124
Identity = 218/220 (99.09%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDS+SLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSESLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 221
           LEEYTSENPKI+TKCCHHFHLGCIYEWMERSDNCPVCGKV
Sbjct: 181 LEEYTSENPKILTKCCHHFHLGCIYEWMERSDNCPVCGKV 220

[Close]

BLAST of CmoCh04G029440 vs. NCBI nr
Match: XP_008459404.1 (PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo])

HSP 1 Score: 431.4 bits (1108), Expect = 5.5e-117
Identity = 205/219 (93.61%), Postives = 213/219 (97.26%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLS++DFEDYVNPNSSVYRNCTCLSCFIQ+FLNAYTLIFRRGEVH VSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSM+S +STDNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGSAGKWNGSACL+ESKENLGKSSLK PSTKST+G GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGK 220
           LEEYTSENPKIVTKC HHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of CmoCh04G029440 vs. NCBI nr
Match: XP_038889911.1 (E3 ubiquitin-protein ligase At3g02290 [Benincasa hispida])

HSP 1 Score: 429.9 bits (1104), Expect = 1.6e-116
Identity = 204/220 (92.73%), Postives = 213/220 (96.82%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGAVCCCLS++DFEDYVNPNSSVYRNCTCLSCFIQ+FL+AYTLIFRRGEVH VSSSIQG 
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLSAYTLIFRRGEVHSVSSSIQGT 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           TSM+S +STDNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180
           +VDTDSDSLGSAGKWNGSACL+ESKENLGKSSLK PSTKSTTG GYAYTSSEDEDVCPTC
Sbjct: 121 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 221
           LEEYTSENPKIVTKC HHFHLGCIYEWMERSDNCPVCGKV
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV 220

[Close]

BLAST of CmoCh04G029440 vs. TAIR 10
Match: AT3G02290.1 (RING/U-box superfamily protein )

HSP 1 Score: 269.6 bits (688), Expect = 2.6e-72
Identity = 138/228 (60.53%), Postives = 162/228 (71.05%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MG V  C  ++D ++Y+NPNSSVYRNC C+ C   NFLN Y  +FRRGE   + SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
            S++S+SS DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH HEE EPLR 
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 121 EVDTDSDSLGSAG-KW-NGSACL---DESKENLGKSSLKIPSTKSTT---GAGYAYTSSE 180
           + D DS+S G  G KW N  + L   D  +E   KSSL+I  ++S +    +   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 181 DEDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 221
           DEDVCPTCLEEYTSENPKIVTKC HHFHL CIYEWMERS+NCPVCGKV
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKV 224

[Close]

BLAST of CmoCh04G029440 vs. TAIR 10
Match: AT5G15790.1 (RING/U-box superfamily protein )

HSP 1 Score: 265.4 bits (677), Expect = 4.8e-71
Identity = 136/227 (59.91%), Postives = 163/227 (71.81%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MG V  C  +DDFEDY NP+SSV R+C C  C + NFLN Y  +FRRGE   + SS+Q A
Sbjct: 1   MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQ-A 60

Query: 61  TSMSSASST--DNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPL 120
           T++S A+ST  DN +S  + S PRPLPYDADPRY R +RD L+SRR+KGSSH HEE+EPL
Sbjct: 61  TNVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPL 120

Query: 121 RGEVDTDSDSLGSAG-KWNGSACL--DESKENLGKSSLKI--PSTKSTTGAGYAYTSSED 180
           R + D DS+S    G KW     +  ++SKE   +SS +I    T ST+  G  Y +S+D
Sbjct: 121 RSDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEG-LYITSDD 180

Query: 181 EDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 221
           EDVCPTCLEEY SENPKIVTKC HHFHL CIYEWMERS+NCPVCGKV
Sbjct: 181 EDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKV 225

[Close]

BLAST of CmoCh04G029440 vs. TAIR 10
Match: AT5G15790.2 (RING/U-box superfamily protein )

HSP 1 Score: 265.4 bits (677), Expect = 4.8e-71
Identity = 136/227 (59.91%), Postives = 163/227 (71.81%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MG V  C  +DDFEDY NP+SSV R+C C  C + NFLN Y  +FRRGE   + SS+Q A
Sbjct: 1   MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQ-A 60

Query: 61  TSMSSASST--DNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPL 120
           T++S A+ST  DN +S  + S PRPLPYDADPRY R +RD L+SRR+KGSSH HEE+EPL
Sbjct: 61  TNVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPL 120

Query: 121 RGEVDTDSDSLGSAG-KWNGSACL--DESKENLGKSSLKI--PSTKSTTGAGYAYTSSED 180
           R + D DS+S    G KW     +  ++SKE   +SS +I    T ST+  G  Y +S+D
Sbjct: 121 RSDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEG-LYITSDD 180

Query: 181 EDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 221
           EDVCPTCLEEY SENPKIVTKC HHFHL CIYEWMERS+NCPVCGKV
Sbjct: 181 EDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKV 225

[Close]

BLAST of CmoCh04G029440 vs. TAIR 10
Match: AT5G38895.1 (RING/U-box superfamily protein )

HSP 1 Score: 261.9 bits (668), Expect = 5.3e-70
Identity = 123/221 (55.66%), Postives = 155/221 (70.14%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGA CCC  +D FE YVNPN+S+ RNC CL+CF+Q+F++ Y  +F RG +HP+ S+++ A
Sbjct: 1   MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 60

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           T M+S ++ D+SLS +Y SPP PLPYDADPRY R           KGSSH  EESEPLRG
Sbjct: 61  TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRF---------VKGSSHSGEESEPLRG 120

Query: 121 EVDTDSDSLGSAG-KWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPT 180
           + +  S++LG  G KW+ S   D SKE   K S     +K+  G    Y  S+DED+CPT
Sbjct: 121 DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPT 180

Query: 181 CLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 221
           CL++YT ENPKI+TKC HHFHL CIYEWMERS+ CPVCGKV
Sbjct: 181 CLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKV 212

[Close]

BLAST of CmoCh04G029440 vs. TAIR 10
Match: AT5G38895.3 (RING/U-box superfamily protein )

HSP 1 Score: 261.9 bits (668), Expect = 5.3e-70
Identity = 123/221 (55.66%), Postives = 155/221 (70.14%), Query Frame = 0


Query: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60
           MGA CCC  +D FE YVNPN+S+ RNC CL+CF+Q+F++ Y  +F RG +HP+ S+++ A
Sbjct: 106 MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 165

Query: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120
           T M+S ++ D+SLS +Y SPP PLPYDADPRY R           KGSSH  EESEPLRG
Sbjct: 166 TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRF---------VKGSSHSGEESEPLRG 225

Query: 121 EVDTDSDSLGSAG-KWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPT 180
           + +  S++LG  G KW+ S   D SKE   K S     +K+  G    Y  S+DED+CPT
Sbjct: 226 DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPT 285

Query: 181 CLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 221
           CL++YT ENPKI+TKC HHFHL CIYEWMERS+ CPVCGKV
Sbjct: 286 CLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKV 317

The following BLAST results are available for this feature:

BLAST of CmoCh04G029440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LE94	3.6e-71	60.53	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022...	[more]
Q2HIJ8	9.0e-14	42.45	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q93ZF6	4.5e-13	66.67	E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ...	[more]
Q4TU14	5.1e-09	38.16	E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 ...	[more]
Q9ZT42	9.7e-08	38.98	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 ...	[more]

BLAST of CmoCh04G029440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GR85	1.5e-125	100.00	E3 ubiquitin-protein ligase At3g02290 OS=Cucurbita moschata OX=3662 GN=LOC111456...	[more]
A0A6J1JPB8	1.0e-124	99.09	E3 ubiquitin-protein ligase At3g02290 isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A1S3CA28	2.6e-117	93.61	E3 ubiquitin-protein ligase At3g02290 OS=Cucumis melo OX=3656 GN=LOC103498549 PE...	[more]
A0A0A0KSH8	3.2e-115	92.69	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G642120 P...	[more]
A0A6J1BYQ7	4.2e-115	90.91	E3 ubiquitin-protein ligase At3g02290 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of CmoCh04G029440 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033220.1	2.4e-125	99.11	E3 ubiquitin-protein ligase [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022954554.1	3.2e-125	100.00	E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_022954561.1 E3 ub...	[more]
XP_022990150.1	2.1e-124	99.09	E3 ubiquitin-protein ligase At3g02290 isoform X1 [Cucurbita maxima] >XP_02299015...	[more]
XP_008459404.1	5.5e-117	93.61	PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo]	[more]
XP_038889911.1	1.6e-116	92.73	E3 ubiquitin-protein ligase At3g02290 [Benincasa hispida]	[more]

BLAST of CmoCh04G029440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02290.1	2.6e-72	60.53	RING/U-box superfamily protein	[more]
AT5G15790.1	4.8e-71	59.91	RING/U-box superfamily protein	[more]
AT5G15790.2	4.8e-71	59.91	RING/U-box superfamily protein	[more]
AT5G38895.1	5.3e-70	55.66	RING/U-box superfamily protein	[more]
AT5G38895.3	5.3e-70	55.66	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 177..217 e-value: 1.3E-5 score: 34.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 176..217 e-value: 2.0E-10 score: 40.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 177..217 score: 11.677863
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 153..224 e-value: 8.6E-14 score: 52.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..76
None	No IPR available	PANTHER	PTHR46463	ZINC FINGER, RING/FYVE/PHD-TYPE	coord: 1..221
None	No IPR available	PANTHER	PTHR46463:SF43	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 1..221
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 172..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G029440.1	CmoCh04G029440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding