CmoCh04G027920 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G027920
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionskin secretory protein xP2-like
LocationCmo_Chr04: 20091658 .. 20092542 (-)
RNA-Seq ExpressionCmoCh04G027920
SyntenyCmoCh04G027920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAATCCGGCAAATCCGGCGAGCCTCTGAACCTAAAACTGAATCCTCCGCCGTTGGGCACTGAAGTCCTTCAAATACTCTTCCCCTTCCCTCCTTCAAACTCATTCTCTGGTGTTGCAGTCTTTCTCTATATACCTTACAGAGGATTTCTGCGACCTTCAGAATCCTATTTAAATAAAACTTCCTCTCTTTTTCTCTTCGATTCTCCTCATCTCTTTGCCGCTTCAGCATTAATGGCCCGCCAACTGCTTCTCCTCGCTCTTCTCTTCGCCGCCGTCCTCGGCATTGCCTCTGCTGCCAAGGCCCCAGCCCCTGACGCCGACTCTGCCGCAGCCAAGACCCCGGCTGCTGCTCCATCCAACTCTTCCTCCGCTGCCGATGCACCCAAAGGGGCTGCTTCTGCCCCCAAGGCCGAAGCCGATGCTCCCGAGGCCGATGCCGGAGCTCCAAAGGCCGATGCCGGAGCCCCAAAGGCAGAAGCCGGTGCTCCCGAGGCCGATGCCGGAGCCCCAAAGGCAGAAGCCGGTGCTCCCGAGGCCGATGCCGGAGCCCCAAAGGCAGAAGCCGGTGCTCCCGAGGCCGATGCCGAAGCCCCGAAGGCAGAAGCCGGAGCCCCCGAGGCCGATGCCGGAGCCCCTAGTGCTGATGCCCCTGCCGGTAGCCCTGCATCCGGGCCGGCCAGCGATGAGTCTCCCTCCGCAGCCCCTGAATCCGATGCAGAGGCGTCATCTCCACCTTCCCCAAGCGGACCTGCGGAAGGACCAGCCAGCGAGGAGGAAGCTGCAGATGCACCGGCCCCTGATGCTTCTGGCAGTGGATCTTCGTTCCTGAAGATGTCTGCTACCACGGTTGCGACCATTGCTGGAGTCATTGTGTTCTAA

mRNA sequence

ATGGCGAAATCCGGCAAATCCGGCGAGCCTCTGAACCTAAAACTGAATCCTCCGCCGTTGGGCACTGAAGTCCTTCAAATACTCTTCCCCTTCCCTCCTTCAAACTCATTCTCTGGTGTTGCAGTCTTTCTCTATATACCTTACAGAGGATTTCTGCGACCTTCAGAATCCTATTTAAATAAAACTTCCTCTCTTTTTCTCTTCGATTCTCCTCATCTCTTTGCCGCTTCAGCATTAATGGCCCGCCAACTGCTTCTCCTCGCTCTTCTCTTCGCCGCCGTCCTCGGCATTGCCTCTGCTGCCAAGGCCCCAGCCCCTGACGCCGACTCTGCCGCAGCCAAGACCCCGGCTGCTGCTCCATCCAACTCTTCCTCCGCTGCCGATGCACCCAAAGGGGCTGCTTCTGCCCCCAAGGCCGAAGCCGATGCTCCCGAGGCCGATGCCGGAGCTCCAAAGGCCGATGCCGGAGCCCCAAAGGCAGAAGCCGGTGCTCCCGAGGCCGATGCCGGAGCCCCAAAGGCAGAAGCCGGTGCTCCCGAGGCCGATGCCGGAGCCCCAAAGGCAGAAGCCGGTGCTCCCGAGGCCGATGCCGAAGCCCCGAAGGCAGAAGCCGGAGCCCCCGAGGCCGATGCCGGAGCCCCTAGTGCTGATGCCCCTGCCGGTAGCCCTGCATCCGGGCCGGCCAGCGATGAGTCTCCCTCCGCAGCCCCTGAATCCGATGCAGAGGCGTCATCTCCACCTTCCCCAAGCGGACCTGCGGAAGGACCAGCCAGCGAGGAGGAAGCTGCAGATGCACCGGCCCCTGATGCTTCTGGCAGTGGATCTTCGTTCCTGAAGATGTCTGCTACCACGGTTGCGACCATTGCTGGAGTCATTGTGTTCTAA

Coding sequence (CDS)

ATGGCGAAATCCGGCAAATCCGGCGAGCCTCTGAACCTAAAACTGAATCCTCCGCCGTTGGGCACTGAAGTCCTTCAAATACTCTTCCCCTTCCCTCCTTCAAACTCATTCTCTGGTGTTGCAGTCTTTCTCTATATACCTTACAGAGGATTTCTGCGACCTTCAGAATCCTATTTAAATAAAACTTCCTCTCTTTTTCTCTTCGATTCTCCTCATCTCTTTGCCGCTTCAGCATTAATGGCCCGCCAACTGCTTCTCCTCGCTCTTCTCTTCGCCGCCGTCCTCGGCATTGCCTCTGCTGCCAAGGCCCCAGCCCCTGACGCCGACTCTGCCGCAGCCAAGACCCCGGCTGCTGCTCCATCCAACTCTTCCTCCGCTGCCGATGCACCCAAAGGGGCTGCTTCTGCCCCCAAGGCCGAAGCCGATGCTCCCGAGGCCGATGCCGGAGCTCCAAAGGCCGATGCCGGAGCCCCAAAGGCAGAAGCCGGTGCTCCCGAGGCCGATGCCGGAGCCCCAAAGGCAGAAGCCGGTGCTCCCGAGGCCGATGCCGGAGCCCCAAAGGCAGAAGCCGGTGCTCCCGAGGCCGATGCCGAAGCCCCGAAGGCAGAAGCCGGAGCCCCCGAGGCCGATGCCGGAGCCCCTAGTGCTGATGCCCCTGCCGGTAGCCCTGCATCCGGGCCGGCCAGCGATGAGTCTCCCTCCGCAGCCCCTGAATCCGATGCAGAGGCGTCATCTCCACCTTCCCCAAGCGGACCTGCGGAAGGACCAGCCAGCGAGGAGGAAGCTGCAGATGCACCGGCCCCTGATGCTTCTGGCAGTGGATCTTCGTTCCTGAAGATGTCTGCTACCACGGTTGCGACCATTGCTGGAGTCATTGTGTTCTAA

Protein sequence

MAKSGKSGEPLNLKLNPPPLGTEVLQILFPFPPSNSFSGVAVFLYIPYRGFLRPSESYLNKTSSLFLFDSPHLFAASALMARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAPSNSSSAADAPKGAASAPKAEADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPEADAGAPKAEAGAPEADAEAPKAEAGAPEADAGAPSADAPAGSPASGPASDESPSAAPESDAEASSPPSPSGPAEGPASEEEAADAPAPDASGSGSSFLKMSATTVATIAGVIVF
Homology
BLAST of CmoCh04G027920 vs. ExPASy TrEMBL
Match: A0A6J1H5Y9 (skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111460771 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.3e-133
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0

Query: 1   MAKSGKSGEPLNLKLNPPPLGTEVLQILFPFPPSNSFSGVAVFLYIPYRGFLRPSESYLN 60
           MAKSGKSGEPLNLKLNPPPLGTEVLQILFPFPPSNSFSGVAVFLYIPYRGFLRPSESYLN
Sbjct: 1   MAKSGKSGEPLNLKLNPPPLGTEVLQILFPFPPSNSFSGVAVFLYIPYRGFLRPSESYLN 60

Query: 61  KTSSLFLFDSPHLFAASALMARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAP 120
           KTSSLFLFDSPHLFAASALMARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAP
Sbjct: 61  KTSSLFLFDSPHLFAASALMARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAP 120

Query: 121 SNSSSAADAPKGAASAPKAEADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPE 180
           SNSSSAADAPKGAASAPKAEADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPE
Sbjct: 121 SNSSSAADAPKGAASAPKAEADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPE 180

Query: 181 ADAGAPKAEAGAPEADAEAPKAEAGAPEADAGAPSADAPAGSPASGPASDESPSAAPESD 240
           ADAGAPKAEAGAPEADAEAPKAEAGAPEADAGAPSADAPAGSPASGPASDESPSAAPESD
Sbjct: 181 ADAGAPKAEAGAPEADAEAPKAEAGAPEADAGAPSADAPAGSPASGPASDESPSAAPESD 240

Query: 241 AEASSPPSPSGPAEGPASEEEAADAPAPDASGSGSSFLKMSATTVATIAGVIVF 295
           AEASSPPSPSGPAEGPASEEEAADAPAPDASGSGSSFLKMSATTVATIAGVIVF
Sbjct: 241 AEASSPPSPSGPAEGPASEEEAADAPAPDASGSGSSFLKMSATTVATIAGVIVF 294

BLAST of CmoCh04G027920 vs. ExPASy TrEMBL
Match: A0A6J1JUB2 (tropomyosin-1, isoforms 33/34-like OS=Cucurbita maxima OX=3661 GN=LOC111487570 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 3.7e-67
Identity = 182/215 (84.65%), Postives = 193/215 (89.77%), Query Frame = 0

Query: 80  MARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAPSNSSSAADAPKGAASAPKA 139
           MARQLLL ALLFA +LGIASAAKAP  DADSAAAKTPAAAPSNSSSAAD PKGAAS+PKA
Sbjct: 1   MARQLLLHALLFAVLLGIASAAKAPPADADSAAAKTPAAAPSNSSSAADEPKGAASSPKA 60

Query: 140 EADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPEADAGAPKAEAGAPEADAEA 199
           EADAPEA+AGAPKADAGAPKAEAGAP+A+AGAPKAEAGAP+A+AG              A
Sbjct: 61  EADAPEAEAGAPKADAGAPKAEAGAPKAEAGAPKAEAGAPKAEAG--------------A 120

Query: 200 PKAEAGAPEADAGAPSADAPAGSPASGPASDESPSAAPESDAEASSPPSPSGPAEGPASE 259
           PKA+AGAP+A+AGAP+ADAPAGSPASGPASDESPSAAPESDAEASSPPSPSG A GPASE
Sbjct: 121 PKADAGAPKAEAGAPNADAPAGSPASGPASDESPSAAPESDAEASSPPSPSGTAGGPASE 180

Query: 260 EEAADAPAPDASGSGSSFLKMSATTVATIAGVIVF 295
           EEAADAPAPDAS SGSSFLKMSATTVATIAGVIVF
Sbjct: 181 EEAADAPAPDASASGSSFLKMSATTVATIAGVIVF 201

BLAST of CmoCh04G027920 vs. ExPASy TrEMBL
Match: A0A6J1FDY2 (skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111444655 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.6e-54
Identity = 185/304 (60.86%), Postives = 214/304 (70.39%), Query Frame = 0

Query: 1   MAKSGKSGEPLNLKLNPPPLGTEVLQILFPFPPSNSFSGVAVFLYIPYRGFLRPSESYLN 60
           MAKS KSGEPLN K NPPP      +   PF    + S V     I  RGFL+PSESYLN
Sbjct: 1   MAKSAKSGEPLNSKRNPPPSAGNPFKCHSPF-LLQTHSLVLQSFSIYLRGFLQPSESYLN 60

Query: 61  KTSSLFLFDSPHLFAASALMARQLLLLALLFAAVLGIASAAKAPA-----PDADSAAAKT 120
           K     L  S HL   SA MARQLLLLAL+FA V+GI SAA   A      DA SA  KT
Sbjct: 61  KFP---LSSSSHLLTKSATMARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKT 120

Query: 121 PAAAPSNSSSAADAPKGAASAPKAEADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAE 180
            AAA   + S A A KGAAS+PKA+A AP+ADAGAP+ADAGAPKA+AGAPEADAGAPKA+
Sbjct: 121 AAAA---APSPAHAHKGAASSPKADAGAPKADAGAPEADAGAPKADAGAPEADAGAPKAD 180

Query: 181 AGAPEADAGAPKAEAGAPEADAEAPKAEAGAPEADAGAPSADAPAGSPASGPASDE---- 240
           AGAP+ADAGAP+A+AGAP+ADA AP+AEAGAP+A +    AD PA  PASGPA +E    
Sbjct: 181 AGAPKADAGAPEADAGAPKADAGAPEAEAGAPKASS---PADGPASGPASGPAGNEGSAD 240

Query: 241 SPSAAPESDAEASSPPSPSGPAEGPASE-EEAADAPA---PDASGSGSSFLKMSATTVAT 292
           SP+ +PESDA+ASSPPSPSGPA GP SE E+ ADAP+    D+  S +SF K+SA TVA 
Sbjct: 241 SPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAPSDSPADSPPSDASFQKVSAATVAG 294

BLAST of CmoCh04G027920 vs. ExPASy TrEMBL
Match: A0A6J1JWR2 (tropomyosin-1, isoforms 33/34-like OS=Cucurbita maxima OX=3661 GN=LOC111489030 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.3e-40
Identity = 153/254 (60.24%), Postives = 176/254 (69.29%), Query Frame = 0

Query: 80  MARQLLLLALLFAAVLGIASAAKAPAPD------------ADSAAAKTPAAAPSNSSSA- 139
           MARQLLLLAL+FA V+GI SAA   A D              +AAA TPA A   ++S+ 
Sbjct: 1   MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSP 60

Query: 140 ----------ADAPKGAASAPKAEADAPEADAGAPKADAGAPKAEAGAPE-------ADA 199
                     A APK  A APKA+A APEADAGAPKADAGAPKA+AGAPE       ADA
Sbjct: 61  RADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADA 120

Query: 200 GAPKAEAGAPEADAGAPKAEAGAPEADAEAPKAEAGAPEADAGAPSADAPAGSPASGPAS 259
           GAPKA+AGAPEADAGAPKA+AGAP+ADA APKA+AGAPEADAGAP A +PA  PASGPAS
Sbjct: 121 GAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPKASSPADGPASGPAS 180

Query: 260 D--------ESPSAAPESDAEASSPPSPSGPAEGPASE-EEAADAPA---PDASGSGSSF 292
                    +SP+ +PESDA+ASSPPSPSGPA GP SE E+ ADAP+    D+  S +SF
Sbjct: 181 GPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAPSDSPSDSPPSDASF 240

BLAST of CmoCh04G027920 vs. ExPASy TrEMBL
Match: A0A1S3CA92 (skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-09
Identity = 100/218 (45.87%), Postives = 124/218 (56.88%), Query Frame = 0

Query: 80  MARQLLLLALLF-AAVLGIASAAKAPAPDADSAAAKTPAAAPSNSSSAADAPKGAASAPK 139
           MARQ +LLALLF AAV+GI SAA+AP        A +PA++P             AS+PK
Sbjct: 1   MARQFILLALLFSAAVIGIVSAAEAP--------AASPASSP-------------ASSPK 60

Query: 140 AEADAPEADAGAPKADAGAP-KAEAGAPEADAGAPKAEAGAPEADAGAPKAEAGAPEADA 199
           A AD   +D G  K  A AP KA A A +A      + AGAP+  A AP A+ GAPEAD+
Sbjct: 61  A-ADLEPSDDG--KTPAAAPSKAPAAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADS 120

Query: 200 EAPKAEAGAPEADAGAPSADAPAGSPASGPASDESPSAAPESDAEASSPPSPSGPAEGPA 259
                 A +P  D  + S  APAG+PA  PA          SDAE SSPPSP+GPA GPA
Sbjct: 121 PVAGGPASSPAGDESS-STVAPAGAPAGAPA----------SDAEVSSPPSPTGPAAGPA 180

Query: 260 SEEEA---ADAPAPDASGSGSSFLKMSATTVATIAGVI 293
           S+  A   AD+PA   + SG S +K+S   VA I+GV+
Sbjct: 181 SDAAADAPADSPADSPAPSGGSLVKVSVAAVAGISGVV 183

BLAST of CmoCh04G027920 vs. NCBI nr
Match: XP_022959826.1 (skin secretory protein xP2-like [Cucurbita moschata])

HSP 1 Score: 485.7 bits (1249), Expect = 2.8e-133
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0

Query: 1   MAKSGKSGEPLNLKLNPPPLGTEVLQILFPFPPSNSFSGVAVFLYIPYRGFLRPSESYLN 60
           MAKSGKSGEPLNLKLNPPPLGTEVLQILFPFPPSNSFSGVAVFLYIPYRGFLRPSESYLN
Sbjct: 1   MAKSGKSGEPLNLKLNPPPLGTEVLQILFPFPPSNSFSGVAVFLYIPYRGFLRPSESYLN 60

Query: 61  KTSSLFLFDSPHLFAASALMARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAP 120
           KTSSLFLFDSPHLFAASALMARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAP
Sbjct: 61  KTSSLFLFDSPHLFAASALMARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAP 120

Query: 121 SNSSSAADAPKGAASAPKAEADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPE 180
           SNSSSAADAPKGAASAPKAEADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPE
Sbjct: 121 SNSSSAADAPKGAASAPKAEADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPE 180

Query: 181 ADAGAPKAEAGAPEADAEAPKAEAGAPEADAGAPSADAPAGSPASGPASDESPSAAPESD 240
           ADAGAPKAEAGAPEADAEAPKAEAGAPEADAGAPSADAPAGSPASGPASDESPSAAPESD
Sbjct: 181 ADAGAPKAEAGAPEADAEAPKAEAGAPEADAGAPSADAPAGSPASGPASDESPSAAPESD 240

Query: 241 AEASSPPSPSGPAEGPASEEEAADAPAPDASGSGSSFLKMSATTVATIAGVIVF 295
           AEASSPPSPSGPAEGPASEEEAADAPAPDASGSGSSFLKMSATTVATIAGVIVF
Sbjct: 241 AEASSPPSPSGPAEGPASEEEAADAPAPDASGSGSSFLKMSATTVATIAGVIVF 294

BLAST of CmoCh04G027920 vs. NCBI nr
Match: KAG6602398.1 (hypothetical protein SDJN03_07631, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300.8 bits (769), Expect = 1.3e-77
Identity = 197/215 (91.63%), Postives = 211/215 (98.14%), Query Frame = 0

Query: 80  MARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAPSNSSSAADAPKGAASAPKA 139
           MARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAPSNSSSAADAPKGAASAPKA
Sbjct: 1   MARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAPSNSSSAADAPKGAASAPKA 60

Query: 140 EADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPEADAGAPKAEAGAPEADAEA 199
           EADAPEADAGAPKA+AGAP+A+AGAP+A+AGAP+A+AGAP+A+AGAP+AEAGAPEA+A A
Sbjct: 61  EADAPEADAGAPKAEAGAPEADAGAPKAEAGAPEADAGAPKAEAGAPEAEAGAPEAEAGA 120

Query: 200 PKAEAGAPEADAGAPSADAPAGSPASGPASDESPSAAPESDAEASSPPSPSGPAEGPASE 259
           P+AEAGAPEADAG+P+ADAPAGSPASG ASDESPSAAPESDAEASSPPSPSGPAEGP SE
Sbjct: 121 PEAEAGAPEADAGSPNADAPAGSPASGAASDESPSAAPESDAEASSPPSPSGPAEGPGSE 180

Query: 260 EEAADAPAPDASGSGSSFLKMSATTVATIAGVIVF 295
           EEAADAPAPDAS SGSSFLKMSATTVATIAGVIVF
Sbjct: 181 EEAADAPAPDASASGSSFLKMSATTVATIAGVIVF 215

BLAST of CmoCh04G027920 vs. NCBI nr
Match: XP_023543865.1 (predicted GPI-anchored protein 58 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.0 bits (689), Expect = 2.4e-68
Identity = 204/292 (69.86%), Postives = 207/292 (70.89%), Query Frame = 0

Query: 80  MARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAPSNSSSAADAPKGAASAPKA 139
           MARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAPSNSSSAADAPK  A AP+A
Sbjct: 1   MARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAPSNSSSAADAPKADAGAPEA 60

Query: 140 EADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPE------------------- 199
           +A APEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPE                   
Sbjct: 61  DAGAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPEAEAGAPEAEAGAPEADAGA 120

Query: 200 ----------------ADAGAPKAEAGAPEADAEAPKAEAGAPE---------------- 259
                           ADAGAPKAEAGAPEADA APKAEAGAPE                
Sbjct: 121 PEADAGAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPEAEAGAPEAEAGAPEAD 180

Query: 260 --------------------------ADAGAPSADAPAGSPASGPASDESPSAAPESDAE 295
                                     ADAGAP+ADAPAGSPASGPASDES SAAPESDAE
Sbjct: 181 AGAPEADAGAPEADAGAPEAEAGAPKADAGAPNADAPAGSPASGPASDESTSAAPESDAE 240

BLAST of CmoCh04G027920 vs. NCBI nr
Match: XP_022990788.1 (tropomyosin-1, isoforms 33/34-like [Cucurbita maxima])

HSP 1 Score: 265.0 bits (676), Expect = 7.7e-67
Identity = 182/215 (84.65%), Postives = 193/215 (89.77%), Query Frame = 0

Query: 80  MARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAPSNSSSAADAPKGAASAPKA 139
           MARQLLL ALLFA +LGIASAAKAP  DADSAAAKTPAAAPSNSSSAAD PKGAAS+PKA
Sbjct: 1   MARQLLLHALLFAVLLGIASAAKAPPADADSAAAKTPAAAPSNSSSAADEPKGAASSPKA 60

Query: 140 EADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPEADAGAPKAEAGAPEADAEA 199
           EADAPEA+AGAPKADAGAPKAEAGAP+A+AGAPKAEAGAP+A+AG              A
Sbjct: 61  EADAPEAEAGAPKADAGAPKAEAGAPKAEAGAPKAEAGAPKAEAG--------------A 120

Query: 200 PKAEAGAPEADAGAPSADAPAGSPASGPASDESPSAAPESDAEASSPPSPSGPAEGPASE 259
           PKA+AGAP+A+AGAP+ADAPAGSPASGPASDESPSAAPESDAEASSPPSPSG A GPASE
Sbjct: 121 PKADAGAPKAEAGAPNADAPAGSPASGPASDESPSAAPESDAEASSPPSPSGTAGGPASE 180

Query: 260 EEAADAPAPDASGSGSSFLKMSATTVATIAGVIVF 295
           EEAADAPAPDAS SGSSFLKMSATTVATIAGVIVF
Sbjct: 181 EEAADAPAPDASASGSSFLKMSATTVATIAGVIVF 201

BLAST of CmoCh04G027920 vs. NCBI nr
Match: KAG6578683.1 (hypothetical protein SDJN03_23131, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.3 bits (599), Expect = 6.5e-58
Identity = 189/304 (62.17%), Postives = 218/304 (71.71%), Query Frame = 0

Query: 1   MAKSGKSGEPLNLKLNPPPLGTEVLQILFPFPPSNSFSGVAVFLYIPYRGFLRPSESYLN 60
           MAKS KSGEPLN K NPPP      +   PF    + S V     I  RGFL+PSESYLN
Sbjct: 1   MAKSAKSGEPLNSKRNPPPSAGNPFKCHSPF-LLQTHSLVLQSFSIYLRGFLQPSESYLN 60

Query: 61  KTSSLFLFDSPHLFAASALMARQLLLLALLFAAVLGIASAAKAPA-----PDADSAAAKT 120
           K     L  S HL   SA MARQLLLLAL+FA V+GI SAA   A      DA SA  KT
Sbjct: 61  KFP---LSSSSHLLTKSATMARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKT 120

Query: 121 PAAAPSNSSSAADAPKGAASAPKAEADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAE 180
            AAA   + S A A KGAAS+PKAEA APEA+AGAPKADAGAPKA+AGAP+ADAGAP+A+
Sbjct: 121 AAAA---APSPAHAHKGAASSPKAEAGAPEAEAGAPKADAGAPKADAGAPKADAGAPEAD 180

Query: 181 AGAPEADAGAPKAEAGAPEADAEAPKAEAGAPEADAGAPSADAPAGSPASGPASDE---- 240
           AGAP+ADAGAP+A+AGAPEA+A APKA+AGAPEA+AGAP A +PA  PASGPA +E    
Sbjct: 181 AGAPKADAGAPEADAGAPEAEAGAPKADAGAPEAEAGAPKASSPADGPASGPAGNEGSAD 240

Query: 241 SPSAAPESDAEASSPPSPSGPAEGPASE-EEAADAPA---PDASGSGSSFLKMSATTVAT 292
           SP+ +PESDA+ASSPPSPSGPA GP SE E+ ADAP+    D+  S +SF K+SA TVA 
Sbjct: 241 SPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAPSDSPADSPPSDASFQKVSAATVAG 297

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1H5Y91.3e-133100.00skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111460771 PE... [more]
A0A6J1JUB23.7e-6784.65tropomyosin-1, isoforms 33/34-like OS=Cucurbita maxima OX=3661 GN=LOC111487570 P... [more]
A0A6J1FDY21.6e-5460.86skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111444655 PE... [more]
A0A6J1JWR22.3e-4060.24tropomyosin-1, isoforms 33/34-like OS=Cucurbita maxima OX=3661 GN=LOC111489030 P... [more]
A0A1S3CA922.1e-0945.87skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022959826.12.8e-133100.00skin secretory protein xP2-like [Cucurbita moschata][more]
KAG6602398.11.3e-7791.63hypothetical protein SDJN03_07631, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023543865.12.4e-6869.86predicted GPI-anchored protein 58 [Cucurbita pepo subsp. pepo][more]
XP_022990788.17.7e-6784.65tropomyosin-1, isoforms 33/34-like [Cucurbita maxima][more]
KAG6578683.16.5e-5862.17hypothetical protein SDJN03_23131, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..277

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G027920.1CmoCh04G027920.1mRNA