CmoCh04G027740 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G027740
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	16 kDa phloem protein 2
Location	Cmo_Chr04: 20026703 .. 20027638 (+)
RNA-Seq Expression	CmoCh04G027740
Synteny	CmoCh04G027740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGACAGAGGCAAAGCGATGGCGATGGGTATGTTGGAGGTCCACTTGATTAGTGGTAAAGGACTTCAAGCCCATGATCCGCTTAATAGTAAGCTCCAATCTGCGGTTCCTACTTGCTTTCATGCTCTGCCTATGCTCTTACTTACTTATTAACCTATTCCATTTTCTCCCCATTTCGCAGAACCAATTGACCCTTATGTTGAGATCAACTACAAGGGCCAAGAACGCATGAGCAAAGTTGCTAAAAGTTAGTCTCTCCTTTTTCTTTCCGGCCTCTAAAATTTTATAAACTAATATAATTTTTGTTCGTGTGGTTTTAAATGTCGCAGATGCAGGACCAGATCCAGTATGGAATGAAAAGTTTAAATTCCTAGCAGAGTACCCTGGGAGCGGCGGTGACTTCCTTATCTTATTCAAGGTCATGGACCATGACGTTATAGATGGTGATGATTACATTGGCGATGTCTCGTAAGACCATTGATCTTCTCTTACATAACTACTACTATTACTATCACCACCACATTCACAGTTTACGAAAGATGGAACTAAATGACTATTGCAGAATAGATGTCAAGGATTTATTAGTGGAAGGAGTTAGAAAGGGATGGTCGGAGTTACCGCCTAGAATGTACCAGGTTATAGCACACAAACTTTACTTCAAGGGAGAAATTGAAGTTGGAGTGTCCTTCAAGCGGCAGGTAATAGAGCATGTTTAGTGTTTGAATGTGAGCGTGTGTAAAGTTAAGCTTATTTGGTTTGATTTAATGGTGAAATAGGGGTAATTAAGGAAGAACAAGTGGGAGGATGGAAGCAAAGCGAAGACTACGTGGCTTGCCTTCTTCGAACCCATTCCCCAAATGTATGCAAACTTGTTACCAATTTGAATTTCTACCTCTTTTGGTATGTTATTCAGATTCTAAACTATGAATTAACCTAA

mRNA sequence

CAGACAGAGGCAAAGCGATGGCGATGGGTATGTTGGAGGTCCACTTGATTAGTGGTAAAGGACTTCAAGCCCATGATCCGCTTAATAAACCAATTGACCCTTATGTTGAGATCAACTACAAGGGCCAAGAACGCATGAGCAAAGTTGCTAAAAATGCAGGACCAGATCCAGTATGGAATGAAAAGTTTAAATTCCTAGCAGAGTACCCTGGGAGCGGCGGTGACTTCCTTATCTTATTCAAGGTCATGGACCATGACGTTATAGATGGTGATGATTACATTGGCGATGTCTCAATAGATGTCAAGGATTTATTAGTGGAAGGAGTTAGAAAGGGATGGTCGGAGTTACCGCCTAGAATGTACCAGGTTATAGCACACAAACTTTACTTCAAGGGAGAAATTGAAGTTGGAGTGTCCTTCAAGCGGCAGGTAATAGAGCATGAAGAACAAGTGGGAGGATGGAAGCAAAGCGAAGACTACGTGGCTTGCCTTCTTCGAACCCATTCCCCAAATGTATGCAAACTTGTTACCAATTTGAATTTCTACCTCTTTTGGTATGTTATTCAGATTCTAAACTATGAATTAACCTAA

Coding sequence (CDS)

ATGGCGATGGGTATGTTGGAGGTCCACTTGATTAGTGGTAAAGGACTTCAAGCCCATGATCCGCTTAATAAACCAATTGACCCTTATGTTGAGATCAACTACAAGGGCCAAGAACGCATGAGCAAAGTTGCTAAAAATGCAGGACCAGATCCAGTATGGAATGAAAAGTTTAAATTCCTAGCAGAGTACCCTGGGAGCGGCGGTGACTTCCTTATCTTATTCAAGGTCATGGACCATGACGTTATAGATGGTGATGATTACATTGGCGATGTCTCAATAGATGTCAAGGATTTATTAGTGGAAGGAGTTAGAAAGGGATGGTCGGAGTTACCGCCTAGAATGTACCAGGTTATAGCACACAAACTTTACTTCAAGGGAGAAATTGAAGTTGGAGTGTCCTTCAAGCGGCAGGTAATAGAGCATGAAGAACAAGTGGGAGGATGGAAGCAAAGCGAAGACTACGTGGCTTGCCTTCTTCGAACCCATTCCCCAAATGTATGCAAACTTGTTACCAATTTGAATTTCTACCTCTTTTGGTATGTTATTCAGATTCTAAACTATGAATTAACCTAA

Protein sequence

MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFLAEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAHKLYFKGEIEVGVSFKRQVIEHEEQVGGWKQSEDYVACLLRTHSPNVCKLVTNLNFYLFWYVIQILNYELT

Homology

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BLAST of CmoCh04G027740 vs. ExPASy Swiss-Prot
Match: Q9ZT46 (16 kDa phloem protein 2 OS=Cucurbita maxima OX=3661 GN=PP16-2 PE=1 SV=3)

HSP 1 Score: 263.8 bits (673), Expect = 1.5e-69
Identity = 121/137 (88.32%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           M MGM+EVHLISGKGLQAHDPLNKPIDPY EIN+KGQERMSKVAKNAGPDP+WNEKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFL 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
            EYPGSGGDF ILFKVMDHD IDGDDYIGDV IDV++LL EGVRKGWSELPPRMYQV+AH
Sbjct: 61  VEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVQNLLAEGVRKGWSELPPRMYQVLAH 120

Query: 121 KLYFKGEIEVGVSFKRQ 138
           K+YFKGEIEVGV F+RQ
Sbjct: 121 KIYFKGEIEVGVFFQRQ 137

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BLAST of CmoCh04G027740 vs. ExPASy Swiss-Prot
Match: Q9ZT47 (16 kDa phloem protein 1 OS=Cucurbita maxima OX=3661 GN=PP16-1 PE=1 SV=3)

HSP 1 Score: 253.4 bits (646), Expect = 2.0e-66
Identity = 118/137 (86.13%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           M MGM+EVHLISGKGLQAHDPLNKPIDPY EIN+KGQERMSKVAKNAGP+P+W+EKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPNPLWDEKFKFL 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
           AEYPGSGGDF ILFKVMDHD IDGDDYIGDV IDVK+LL EGVRKG SE+PPRMY V+AH
Sbjct: 61  AEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVKNLLAEGVRKGKSEMPPRMYHVLAH 120

Query: 121 KLYFKGEIEVGVSFKRQ 138
           K++FKGEIEVGVSFK Q
Sbjct: 121 KIHFKGEIEVGVSFKLQ 137

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BLAST of CmoCh04G027740 vs. ExPASy Swiss-Prot
Match: Q9M2T2 (16 kDa phloem protein 1 OS=Arabidopsis thaliana OX=3702 GN=PP16-1 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.5e-37
Identity = 81/155 (52.26%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAK-NAGPDPVWNEKFKF 60
           MA+G+LEV LISGKGL+  D L K IDPYVEI YKGQ R S VAK + G +P WN+K K+
Sbjct: 1   MAVGILEVSLISGKGLKRSDFLGK-IDPYVEIQYKGQTRKSSVAKEDGGRNPTWNDKLKW 60

Query: 61  LAEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIA 120
            AE+PGSG D+ ++ KVMDHD    DD+IG+ ++ VK+LL  GV KG +EL P  Y ++ 
Sbjct: 61  RAEFPGSGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEMGVEKGTAELRPTKYNIVD 120

Query: 121 HKLYFKGEIEVGVSFK--RQVIEHEEQVGGWKQSE 153
             L F GE+ +GVS+   +      EQ GGWK S+
Sbjct: 121 SDLSFVGELLIGVSYSLLQDRGMDGEQFGGWKHSQ 154

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BLAST of CmoCh04G027740 vs. ExPASy Swiss-Prot
Match: A2WWV5 (Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ERG1 PE=2 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-26
Identity = 60/152 (39.47%), Postives = 89/152 (58.55%), Query Frame = 0


Query: 4   GMLEVHLISGKGLQAHDPLNK--PIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFLA 63
           G+LEVHL+  KGL  +D L +   IDPYV + Y+ QER S VA++ G +P WNE FKF  
Sbjct: 5   GVLEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKFQI 64

Query: 64  EYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAHK 123
               + G   +  ++MDHD    DD++G+ +I+V DL+  G+  G  E+    ++V+   
Sbjct: 65  NSTAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSESKHRVVLAD 124

Query: 124 LYFKGEIEVGVSF--KRQVIEHEEQVGGWKQS 152
             + GEI V ++F    +  +H EQVGGW  S
Sbjct: 125 KTYHGEIRVSLTFTASAKAQDHAEQVGGWAHS 156

[Close]

BLAST of CmoCh04G027740 vs. ExPASy Swiss-Prot
Match: Q0JHU5 (Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG1 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-26
Identity = 60/152 (39.47%), Postives = 89/152 (58.55%), Query Frame = 0


Query: 4   GMLEVHLISGKGLQAHDPLNK--PIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFLA 63
           G+LEVHL+  KGL  +D L +   IDPYV + Y+ QER S VA++ G +P WNE FKF  
Sbjct: 5   GVLEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKFQI 64

Query: 64  EYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAHK 123
               + G   +  ++MDHD    DD++G+ +I+V DL+  G+  G  E+    ++V+   
Sbjct: 65  NSTAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSESKHRVVLAD 124

Query: 124 LYFKGEIEVGVSF--KRQVIEHEEQVGGWKQS 152
             + GEI V ++F    +  +H EQVGGW  S
Sbjct: 125 KTYHGEIRVSLTFTASAKAQDHAEQVGGWAHS 156

[Close]

BLAST of CmoCh04G027740 vs. ExPASy TrEMBL
Match: Q4JHI4 (16 kDa. phloem protein 2 OS=Cucurbita maxima x Cucurbita moschata OX=334420 GN=PP16 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.5e-74
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL
Sbjct: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
           AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH
Sbjct: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120

Query: 121 KLYFKGEIEVGVSFKRQ 138
           KLYFKGEIEVGVSFKRQ
Sbjct: 121 KLYFKGEIEVGVSFKRQ 137

[Close]

BLAST of CmoCh04G027740 vs. ExPASy TrEMBL
Match: A0A6J1E6J3 (16 kDa phloem protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111429867 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.5e-74
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL
Sbjct: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
           AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH
Sbjct: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120

Query: 121 KLYFKGEIEVGVSFKRQ 138
           KLYFKGEIEVGVSFKRQ
Sbjct: 121 KLYFKGEIEVGVSFKRQ 137

[Close]

BLAST of CmoCh04G027740 vs. ExPASy TrEMBL
Match: Q4JHJ1 (16 kDa. phloem protein 2 OS=Cucurbita moschata OX=3662 GN=PP16 PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.3e-73
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           MAMGMLEVHLISGKGL+AHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL
Sbjct: 1   MAMGMLEVHLISGKGLRAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
           AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH
Sbjct: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120

Query: 121 KLYFKGEIEVGVSFKRQ 138
           KLYFKGEIEVGVSFKRQ
Sbjct: 121 KLYFKGEIEVGVSFKRQ 137

[Close]

BLAST of CmoCh04G027740 vs. ExPASy TrEMBL
Match: A0MZ35 (16 kDa phloem protein 2 OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.7e-68
Identity = 126/137 (91.97%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           M MGMLEVHLISGKGLQAHDPLNKPIDPYV+INYKGQERMS VAKNAGPDPVWNEKFKFL
Sbjct: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYVDINYKGQERMSGVAKNAGPDPVWNEKFKFL 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
           AEYPGSGGDF ILFKVMDHDVIDGDDYIGDV IDVKDLL EG+R GWSELPPRMYQVIAH
Sbjct: 61  AEYPGSGGDFHILFKVMDHDVIDGDDYIGDVKIDVKDLLAEGIRNGWSELPPRMYQVIAH 120

Query: 121 KLYFKGEIEVGVSFKRQ 138
           K YFKGEIEVGV F+RQ
Sbjct: 121 KRYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027740 vs. ExPASy TrEMBL
Match: Q4JHI6 (16 kDa. phloem protein 1 OS=Cucurbita maxima x Cucurbita moschata OX=334420 GN=PP16 PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 125/137 (91.24%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDP+W+EKFKFL
Sbjct: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
           AEYPGSGGDF ILFKVMDHDVIDGDDYIGDV IDVKDLL EGVRKGWSE+ PRMY V+AH
Sbjct: 61  AEYPGSGGDFHILFKVMDHDVIDGDDYIGDVKIDVKDLLAEGVRKGWSEIRPRMYHVLAH 120

Query: 121 KLYFKGEIEVGVSFKRQ 138
           K++FKGEIEVGVSFK Q
Sbjct: 121 KIHFKGEIEVGVSFKLQ 137

[Close]

BLAST of CmoCh04G027740 vs. NCBI nr
Match: KAG6602381.1 (16 kDa phloem protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 287.3 bits (734), Expect = 9.4e-74
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL
Sbjct: 171 MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 230

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
           AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH
Sbjct: 231 AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 290

Query: 121 KLYFKGEIEVGVSFKRQ 138
           KLYFKGEIEVGVSFKRQ
Sbjct: 291 KLYFKGEIEVGVSFKRQ 307

[Close]

BLAST of CmoCh04G027740 vs. NCBI nr
Match: XP_022921700.1 (16 kDa phloem protein 2 [Cucurbita moschata] >AAY96415.1 16 kDa. phloem protein 2 [Cucurbita maxima x Cucurbita moschata])

HSP 1 Score: 287.3 bits (734), Expect = 9.4e-74
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL
Sbjct: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
           AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH
Sbjct: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120

Query: 121 KLYFKGEIEVGVSFKRQ 138
           KLYFKGEIEVGVSFKRQ
Sbjct: 121 KLYFKGEIEVGVSFKRQ 137

[Close]

BLAST of CmoCh04G027740 vs. NCBI nr
Match: AAY96408.1 (16 kDa. phloem protein 2 [Cucurbita moschata])

HSP 1 Score: 285.8 bits (730), Expect = 2.7e-73
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           MAMGMLEVHLISGKGL+AHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL
Sbjct: 1   MAMGMLEVHLISGKGLRAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
           AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH
Sbjct: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120

Query: 121 KLYFKGEIEVGVSFKRQ 138
           KLYFKGEIEVGVSFKRQ
Sbjct: 121 KLYFKGEIEVGVSFKRQ 137

[Close]

BLAST of CmoCh04G027740 vs. NCBI nr
Match: ABK41005.1 (16 kDa phloem protein 2 [Cucurbita pepo])

HSP 1 Score: 267.7 bits (683), Expect = 7.7e-68
Identity = 126/137 (91.97%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           M MGMLEVHLISGKGLQAHDPLNKPIDPYV+INYKGQERMS VAKNAGPDPVWNEKFKFL
Sbjct: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYVDINYKGQERMSGVAKNAGPDPVWNEKFKFL 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
           AEYPGSGGDF ILFKVMDHDVIDGDDYIGDV IDVKDLL EG+R GWSELPPRMYQVIAH
Sbjct: 61  AEYPGSGGDFHILFKVMDHDVIDGDDYIGDVKIDVKDLLAEGIRNGWSELPPRMYQVIAH 120

Query: 121 KLYFKGEIEVGVSFKRQ 138
           K YFKGEIEVGV F+RQ
Sbjct: 121 KRYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027740 vs. NCBI nr
Match: XP_023529375.1 (16 kDa phloem protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.5 bits (680), Expect = 1.7e-67
Identity = 125/137 (91.24%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           M MGMLEVHLISGKGLQAHDPLNKPIDPYV+INYKG+ERMSKVAKNAGPDPVW EKFKFL
Sbjct: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYVDINYKGRERMSKVAKNAGPDPVWKEKFKFL 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
           AEYPGSGGDF ILFKVMDHDVIDGDDYIGDV IDVKDLL EG+R GWSELPPRMYQVIAH
Sbjct: 61  AEYPGSGGDFHILFKVMDHDVIDGDDYIGDVKIDVKDLLAEGIRNGWSELPPRMYQVIAH 120

Query: 121 KLYFKGEIEVGVSFKRQ 138
           K YFKGEIEVGV F+RQ
Sbjct: 121 KRYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027740 vs. TAIR 10
Match: AT3G55470.2 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 161.4 bits (407), Expect = 7.2e-40
Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           MA+G+LEV LISGKGL+  D L K IDPYVEI YKGQ R S VAK+ G +P WN+K K+ 
Sbjct: 1   MAVGILEVSLISGKGLKRSDFLGK-IDPYVEIQYKGQTRKSSVAKDGGRNPTWNDKLKWR 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
           AE+PGSG D+ ++ KVMDHD    DD+IG+ ++ VK+LL  GV KG +EL P  Y ++  
Sbjct: 61  AEFPGSGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEMGVEKGTAELRPTKYNIVDS 120

Query: 121 KLYFKGEIEVGVSFK--RQVIEHEEQVGGWKQSE 153
            L F GE+ +GVS+   +      EQ GGWK S+
Sbjct: 121 DLSFVGELLIGVSYSLLQDRGMDGEQFGGWKHSQ 153

[Close]

BLAST of CmoCh04G027740 vs. TAIR 10
Match: AT3G55470.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.8e-38
Identity = 81/155 (52.26%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAK-NAGPDPVWNEKFKF 60
           MA+G+LEV LISGKGL+  D L K IDPYVEI YKGQ R S VAK + G +P WN+K K+
Sbjct: 1   MAVGILEVSLISGKGLKRSDFLGK-IDPYVEIQYKGQTRKSSVAKEDGGRNPTWNDKLKW 60

Query: 61  LAEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIA 120
            AE+PGSG D+ ++ KVMDHD    DD+IG+ ++ VK+LL  GV KG +EL P  Y ++ 
Sbjct: 61  RAEFPGSGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEMGVEKGTAELRPTKYNIVD 120

Query: 121 HKLYFKGEIEVGVSFK--RQVIEHEEQVGGWKQSE 153
             L F GE+ +GVS+   +      EQ GGWK S+
Sbjct: 121 SDLSFVGELLIGVSYSLLQDRGMDGEQFGGWKHSQ 154

[Close]

BLAST of CmoCh04G027740 vs. TAIR 10
Match: AT1G63220.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 95.9 bits (237), Expect = 3.7e-20
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           M  G LEV L+S KGL+  D LN  +DPYV++  + Q++ S VA+  G  P WNE F F 
Sbjct: 1   MPHGTLEVVLVSAKGLEDADFLNN-MDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFT 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
                S G   +  K+ D DV   DD +G+ +I ++ + VEG       +PP  Y V+  
Sbjct: 61  V----SEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEG------SIPPTAYNVVKD 120

Query: 121 KLYFKGEIEVGVSFK----RQVIEHEEQVGGWKQSE 153
           + Y KGEI V +SFK    R     EE  GGWK SE
Sbjct: 121 EEY-KGEIWVALSFKPSENRSRGMDEESYGGWKNSE 144

[Close]

BLAST of CmoCh04G027740 vs. TAIR 10
Match: AT1G63220.2 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-14
Identity = 58/156 (37.18%), Postives = 74/156 (47.44%), Query Frame = 0


Query: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFL 60
           M  G LEV L+S KGL+  D LN               + S VA+  G  P WNE F F 
Sbjct: 1   MPHGTLEVVLVSAKGLEDADFLN---------------QKSNVAEGMGTTPEWNETFIFT 60

Query: 61  AEYPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSELPPRMYQVIAH 120
                S G   +  K+ D DV   DD +G+ +I ++ + VEG       +PP  Y V+  
Sbjct: 61  V----SEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEG------SIPPTAYNVVKD 120

Query: 121 KLYFKGEIEVGVSFK----RQVIEHEEQVGGWKQSE 153
           + Y KGEI V +SFK    R     EE  GGWK SE
Sbjct: 121 EEY-KGEIWVALSFKPSENRSRGMDEESYGGWKNSE 130

[Close]

BLAST of CmoCh04G027740 vs. TAIR 10
Match: AT4G05330.1 (ARF-GAP domain 13 )

HSP 1 Score: 55.5 bits (132), Expect = 5.6e-08
Identity = 31/108 (28.70%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 3   MGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPVWNEKFKFLAE 62
           +G+L+V +  G  L   D ++   DPYV +N  G++++     N+  +PVWN+  + +  
Sbjct: 179 IGLLKVTIKKGTNLAIRDMMSS--DPYVVLNL-GKQKLQTTVMNSNLNPVWNQ--ELMLS 238

Query: 63  YPGSGGDFLILFKVMDHDVIDGDDYIGDVSIDVKDLLVEGVRKGWSEL 111
            P S G   +  +V D+D    DD +G+  ID++ L+   +  G  E+
Sbjct: 239 VPESYGP--VKLQVYDYDTFSADDIMGEADIDIQPLITSAMAFGDPEM 279

The following BLAST results are available for this feature:

BLAST of CmoCh04G027740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT46	1.5e-69	88.32	16 kDa phloem protein 2 OS=Cucurbita maxima OX=3661 GN=PP16-2 PE=1 SV=3	[more]
Q9ZT47	2.0e-66	86.13	16 kDa phloem protein 1 OS=Cucurbita maxima OX=3661 GN=PP16-1 PE=1 SV=3	[more]
Q9M2T2	2.5e-37	52.26	16 kDa phloem protein 1 OS=Arabidopsis thaliana OX=3702 GN=PP16-1 PE=1 SV=1	[more]
A2WWV5	1.5e-26	39.47	Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ERG1 PE=...	[more]
Q0JHU5	1.5e-26	39.47	Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG1 P...	[more]

BLAST of CmoCh04G027740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q4JHI4	4.5e-74	100.00	16 kDa. phloem protein 2 OS=Cucurbita maxima x Cucurbita moschata OX=334420 GN=P...	[more]
A0A6J1E6J3	4.5e-74	100.00	16 kDa phloem protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111429867 PE=4 SV=1	[more]
Q4JHJ1	1.3e-73	99.27	16 kDa. phloem protein 2 OS=Cucurbita moschata OX=3662 GN=PP16 PE=2 SV=1	[more]
A0MZ35	3.7e-68	91.97	16 kDa phloem protein 2 OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
Q4JHI6	1.1e-67	91.24	16 kDa. phloem protein 1 OS=Cucurbita maxima x Cucurbita moschata OX=334420 GN=P...	[more]

BLAST of CmoCh04G027740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602381.1	9.4e-74	100.00	16 kDa phloem protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022921700.1	9.4e-74	100.00	16 kDa phloem protein 2 [Cucurbita moschata] >AAY96415.1 16 kDa. phloem protein ...	[more]
AAY96408.1	2.7e-73	99.27	16 kDa. phloem protein 2 [Cucurbita moschata]	[more]
ABK41005.1	7.7e-68	91.97	16 kDa phloem protein 2 [Cucurbita pepo]	[more]
XP_023529375.1	1.7e-67	91.24	16 kDa phloem protein 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh04G027740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55470.2	7.2e-40	52.60	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT3G55470.1	1.8e-38	52.26	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G63220.1	3.7e-20	40.38	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G63220.2	1.8e-14	37.18	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G05330.1	5.6e-08	28.70	ARF-GAP domain 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 5..107 e-value: 2.4E-16 score: 70.3
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 5..110 e-value: 6.0E-18 score: 65.1
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..108 score: 18.879818
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 2..157 e-value: 3.3E-23 score: 84.5
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 2..134
None	No IPR available	PANTHER	PTHR46502:SF15	ELICITOR-RESPONSIVE PROTEIN 1	coord: 1..152
None	No IPR available	PANTHER	PTHR46502	C2 DOMAIN-CONTAINING	coord: 1..152
None	No IPR available	CDD	cd04049	C2_putative_Elicitor-responsive_gene	coord: 4..128 e-value: 3.07329E-65 score: 194.473

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G027740.1	CmoCh04G027740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding