CmoCh04G027620 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G027620
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CASP-like protein
Location	Cmo_Chr04: 19976245 .. 19977105 (+)
RNA-Seq Expression	CmoCh04G027620
Synteny	CmoCh04G027620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACCAAGTATTGTAGGCTGTATACATACATGTATGTATATATATAGAAGCAATTGGAATTGTGGTAAGTGTTGAAGAGCAAGAGCTTGGAAGATGGCAGCCTCAAAGGGTTCAAGAATTGCTTCACTGATTCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCTACCAATTCTAAAACTCTCAACAAAGGGACTGAGAATGAAGCAAAGCTTGAATTTAAGAACGTTTATTCATATCGGTAAGTCTTTTTTTATTTTTTATTTTTTCACTAATTCTTGATTTAATGTTCTTGGGGATGTATGTGTTCCAGTTATTTGATAGCAGCGGCTGTAATTGGAGGTGTTTTGAGTTTGATTCAAATCATTCTCAGCATTTACCATATGGTTACCAAAAGCGAAGGAACTCCGCTCTTTTATTTGTTCAGCGATTACGTAAGTGCATGTAAAAAAGTGTTTTTAAGAGCTTGAAAAGTTGTTTTGGATGAACGTTAAACGATGTTATTGTATGTAGTTGTTGTCGTATCTGTTGTTATCGAGCTCGTCGGCGGCGTTAGGAGCTGGGATCGATATGAGAGCTAATTTGAAGGAGCTGTTTGGAACGCTTTTCGACTCGTTTTTCGACCAGGGGAGTGGTGCAGCTGCTGTTCTTTTTATTGCATTCGTTTGTGCTGCTGTTGTTTCAATTCTCTCTGCATTGGCCCTCATCAGGAAGCCTTGAATCAGTGGTGGTTTCTTTGTTTGATAAATTATGGTCATTTTTATTTACTTTTTTGTATGTGTATCCTTTTCCATTTTTAATTTGTAATATGTGATTTAGATTAATGAATATCTAATTTCATCGAA

mRNA sequence

ACACCAAGTATTGTAGGCTGTATACATACATGTATGTATATATATAGAAGCAATTGGAATTGTGGTAAGTGTTGAAGAGCAAGAGCTTGGAAGATGGCAGCCTCAAAGGGTTCAAGAATTGCTTCACTGATTCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCTACCAATTCTAAAACTCTCAACAAAGGGACTGAGAATGAAGCAAAGCTTGAATTTAAGAACGTTTATTCATATCGTTATTTGATAGCAGCGGCTGTAATTGGAGGTGTTTTGAGTTTGATTCAAATCATTCTCAGCATTTACCATATGGTTACCAAAAGCGAAGGAACTCCGCTCTTTTATTTGTTCAGCGATTACTTGTTGTCGTATCTGTTGTTATCGAGCTCGTCGGCGGCGTTAGGAGCTGGGATCGATATGAGAGCTAATTTGAAGGAGCTGTTTGGAACGCTTTTCGACTCGTTTTTCGACCAGGGGAGTGGTGCAGCTGCTGTTCTTTTTATTGCATTCGTTTGTGCTGCTGTTGTTTCAATTCTCTCTGCATTGGCCCTCATCAGGAAGCCTTGAATCAGTGGTGGTTTCTTTGTTTGATAAATTATGGTCATTTTTATTTACTTTTTTGTATGTGTATCCTTTTCCATTTTTAATTTGTAATATGTGATTTAGATTAATGAATATCTAATTTCATCGAA

Coding sequence (CDS)

ATGGCAGCCTCAAAGGGTTCAAGAATTGCTTCACTGATTCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCTACCAATTCTAAAACTCTCAACAAAGGGACTGAGAATGAAGCAAAGCTTGAATTTAAGAACGTTTATTCATATCGTTATTTGATAGCAGCGGCTGTAATTGGAGGTGTTTTGAGTTTGATTCAAATCATTCTCAGCATTTACCATATGGTTACCAAAAGCGAAGGAACTCCGCTCTTTTATTTGTTCAGCGATTACTTGTTGTCGTATCTGTTGTTATCGAGCTCGTCGGCGGCGTTAGGAGCTGGGATCGATATGAGAGCTAATTTGAAGGAGCTGTTTGGAACGCTTTTCGACTCGTTTTTCGACCAGGGGAGTGGTGCAGCTGCTGTTCTTTTTATTGCATTCGTTTGTGCTGCTGTTGTTTCAATTCTCTCTGCATTGGCCCTCATCAGGAAGCCTTGA

Protein sequence

MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAAAVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLKELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP

Homology

[Close]

BLAST of CmoCh04G027620 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19
Identity = 61/167 (36.53%), Postives = 103/167 (61.68%), Query Frame = 0


Query: 2   AASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAAA 61
           A S  SR+ +L LR+LTF  + +SL+I  TN+ T+  G + E K+  K+ YSYRY++AA 
Sbjct: 14  APSMVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGID-EFKVRSKDFYSYRYMLAAI 73

Query: 62  VIGGVLSLIQIILSIYHM------VTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDM 121
             G   +++QI L++ H+       T  +G  +F  + D ++SY+L + ++AA GA  ++
Sbjct: 74  AFGLTYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKEL 133

Query: 122 RANLKELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRK 163
           +  L  L G   D FF++G  +A++L + FVC A++S+ S+ AL +K
Sbjct: 134 KTQLAGLGG---DKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of CmoCh04G027620 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.5e-19
Identity = 64/163 (39.26%), Postives = 101/163 (61.96%), Query Frame = 0


Query: 4   SKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAAAVI 63
           S  SR+A+LILRILTFI +  SL+I  TN+ TL      E K+ FK+VY+YRY++A  VI
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTATLELDLV-EVKVHFKDVYAYRYMLATIVI 66

Query: 64  GGVLSLIQIILSIYHMVT-----KSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRAN 123
           G   +++QI  ++Y++ T       +G   F  F D ++SY+L++ ++    AG     +
Sbjct: 67  GLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAA----AGFASTKD 126

Query: 124 LKELFGTL--FDSFFDQGSGAAAVLFIAFVCAAVVSILSALAL 160
           +K +F     FD+F ++G  +A++L I FVC AV+S+ S+ AL
Sbjct: 127 IKPVFSGSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of CmoCh04G027620 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-16
Identity = 58/166 (34.94%), Postives = 100/166 (60.24%), Query Frame = 0


Query: 2   AASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAAA 61
           ++S GSR   L+LR+LTF+ + I+LI+ A   +T     E   +++F ++Y+YRY+I+  
Sbjct: 12  SSSTGSRTVLLLLRVLTFVFLLIALILIAIVKQT---DDETGVEIKFNDIYAYRYMISTI 71

Query: 62  VIGGVLSLIQIILSIYHMVT-----KSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMR 121
           +IG   +L+Q+ LSI+ +V+       +G  LF  F D ++SYLL+S S+A  G  +++ 
Sbjct: 72  IIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELG 131

Query: 122 ANLKELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRK 163
                  G   +SF D+ + +A++L IAF+  AV S  ++ AL +K
Sbjct: 132 R------GVPSNSFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of CmoCh04G027620 vs. ExPASy Swiss-Prot
Match: D7LD60 (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-15
Identity = 62/167 (37.13%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 8   RIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAAAVIGGVL 67
           R   L+LR+LT   + I++++ +TN+ TL + +    K+ F +VY+YRY+++AAVIG + 
Sbjct: 14  RTVLLLLRVLTAAFLVITVVLISTNTVTL-EVSSTSIKMRFNDVYAYRYMLSAAVIGLLY 73

Query: 68  SLIQIILSIYHMVTKSEGTPLFYLFS---DYLLSYLLLSSSSAALGAGIDMRANLKELFG 127
           +++Q+ L+I    T +   PL Y F+   D ++SYLL + S+A  G   D    LKE F 
Sbjct: 74  AVVQLFLTISQFATGTT-HPLNYQFNFYGDKIISYLLATGSAAGFGVSKD----LKETFL 133

Query: 128 TLF--------DSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 164
            L         D FF +G  +A++L  AFV  AV+S+ S+LAL ++P
Sbjct: 134 ALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of CmoCh04G027620 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.9e-15
Identity = 62/163 (38.04%), Postives = 99/163 (60.74%), Query Frame = 0


Query: 8   RIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAAAVIGGVL 67
           R   L+LR+LT   + I++++ +TN+ TL + +    KL F +VY+YRY+++AAVIG V 
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVTL-EISSTSIKLPFNDVYAYRYMLSAAVIGLVY 73

Query: 68  SLIQIILSIYHMVTKSEGTPLFYLF---SDYLLSYLLLSSSSAALGAGIDMRAN---LKE 127
           +++Q+ L+I    T  +  PL Y F    D ++SYLL + S+A  G   D++     L E
Sbjct: 74  AVVQLFLTISQFAT-GKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIE 133

Query: 128 LFGT-LFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 164
              T   D FF +G  +A++L  AFV  AV+S+ S+LAL ++P
Sbjct: 134 FDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of CmoCh04G027620 vs. ExPASy TrEMBL
Match: A0A6J1HET3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.1e-75
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60
           MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA
Sbjct: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120
           AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120

Query: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 164
           ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 163

[Close]

BLAST of CmoCh04G027620 vs. ExPASy TrEMBL
Match: A0A6J1JSF8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.1e-72
Identity = 157/163 (96.32%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60
           MAASKGSRIA+LILRILT ILIFISLIINA+NSKTLNKGTENEAKLEFKNVYSYRYLIAA
Sbjct: 1   MAASKGSRIATLILRILTLILIFISLIINASNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120
           AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGID RANLK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDTRANLK 120

Query: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 164
           ELFGTLFDSFFDQGSGAAAVL IAF+CAAVVSILSALALIRKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLLIAFICAAVVSILSALALIRKP 163

[Close]

BLAST of CmoCh04G027620 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.3e-55
Identity = 120/163 (73.62%), Postives = 146/163 (89.57%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60
           MAASKGSRIASLILRILTF+LIFISL+I ATNSKT+ KGTE EAK+EFK+VYSYRYL AA
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120
           AVIG  LSL+QI L++YH+VTKS+GTP F +FSD LL+YLLLS +SA LGAGID+R+N K
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 164
           +L G +F+SFFD+GS +AA+L +AF+C+AVVSILS+LAL+RKP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of CmoCh04G027620 vs. ExPASy TrEMBL
Match: A0A6J1JJD2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.4e-52
Identity = 120/163 (73.62%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60
           M  SKGSRIASLILRILTFILIFISL+INATNSKTLNKG ENE K +FK+VYSYRYLI+ 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120
            +IG VLSL+QI L+IY++VTKS  T LF +FSD LLSYLLLS +SA LGAGID+R  LK
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 164
           EL G L +SF D+G+ +AAVL +AF+CAAVVSILS+LALIRKP
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of CmoCh04G027620 vs. ExPASy TrEMBL
Match: A0A6J1GRM4 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.9e-52
Identity = 121/163 (74.23%), Postives = 138/163 (84.66%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60
           M  SKGSRIASLILRILTFILIFISLIINATNSKT NKG ENE   +FK+VYSYRYLI+ 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60

Query: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120
            VIG VLSL+QI L+IY++VTKS  T LF +FSD LLSYLLLS +SA LGAGID+R  LK
Sbjct: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 164
           EL G L +SFFD+G+ +AAVL +AF+CAAVVSILS+LALIRKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of CmoCh04G027620 vs. NCBI nr
Match: XP_022963262.1 (CASP-like protein 4D1 [Cucurbita moschata] >KAG6602371.1 CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 291.6 bits (745), Expect = 4.3e-75
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60
           MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA
Sbjct: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120
           AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120

Query: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 164
           ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 163

[Close]

BLAST of CmoCh04G027620 vs. NCBI nr
Match: XP_022990589.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 281.6 bits (719), Expect = 4.4e-72
Identity = 157/163 (96.32%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60
           MAASKGSRIA+LILRILT ILIFISLIINA+NSKTLNKGTENEAKLEFKNVYSYRYLIAA
Sbjct: 1   MAASKGSRIATLILRILTLILIFISLIINASNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120
           AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGID RANLK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDTRANLK 120

Query: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 164
           ELFGTLFDSFFDQGSGAAAVL IAF+CAAVVSILSALALIRKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLLIAFICAAVVSILSALALIRKP 163

[Close]

BLAST of CmoCh04G027620 vs. NCBI nr
Match: KAG7033050.1 (CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272.7 bits (696), Expect = 2.0e-69
Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60
           MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA
Sbjct: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120
           AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120

Query: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALAL 160
           ELFGTLFDSFFDQGSGAAAVLFIAFVCAAV S +++L L
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVGSRIASLIL 159

[Close]

BLAST of CmoCh04G027620 vs. NCBI nr
Match: XP_022134193.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-54
Identity = 120/163 (73.62%), Postives = 146/163 (89.57%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60
           MAASKGSRIASLILRILTF+LIFISL+I ATNSKT+ KGTE EAK+EFK+VYSYRYL AA
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120
           AVIG  LSL+QI L++YH+VTKS+GTP F +FSD LL+YLLLS +SA LGAGID+R+N K
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 164
           +L G +F+SFFD+GS +AA+L +AF+C+AVVSILS+LAL+RKP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of CmoCh04G027620 vs. NCBI nr
Match: XP_038877614.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 221.5 bits (563), Expect = 5.4e-54
Identity = 120/161 (74.53%), Postives = 140/161 (86.96%), Query Frame = 0


Query: 3   ASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAAAV 62
           ASKGSRIASLILRILTFILIF++L+I ATNSKT+ +GT NE K+EFK+V SYRYL+A AV
Sbjct: 2   ASKGSRIASLILRILTFILIFVALLIIATNSKTVLEGTVNETKIEFKDVNSYRYLVAVAV 61

Query: 63  IGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLKEL 122
           IGG LSL+QI  +IYH+VTK +GTPLF LFSD LLSYLLLS +SA LGAGIDMR N KEL
Sbjct: 62  IGGALSLLQIAFTIYHLVTKGDGTPLFDLFSDKLLSYLLLSGASAGLGAGIDMRVNFKEL 121

Query: 123 FGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 164
            G  F+SFFD+GS AAA+L +AF+CAA+VSILS+LALIRKP
Sbjct: 122 VGNFFNSFFDKGSAAAAILLLAFICAAIVSILSSLALIRKP 162

[Close]

BLAST of CmoCh04G027620 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-16
Identity = 62/163 (38.04%), Postives = 99/163 (60.74%), Query Frame = 0


Query: 8   RIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAAAVIGGVL 67
           R   L+LR+LT   + I++++ +TN+ TL + +    KL F +VY+YRY+++AAVIG V 
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVTL-EISSTSIKLPFNDVYAYRYMLSAAVIGLVY 73

Query: 68  SLIQIILSIYHMVTKSEGTPLFYLF---SDYLLSYLLLSSSSAALGAGIDMRAN---LKE 127
           +++Q+ L+I    T  +  PL Y F    D ++SYLL + S+A  G   D++     L E
Sbjct: 74  AVVQLFLTISQFAT-GKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIE 133

Query: 128 LFGT-LFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 164
              T   D FF +G  +A++L  AFV  AV+S+ S+LAL ++P
Sbjct: 134 FDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of CmoCh04G027620 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 81.3 bits (199), Expect = 8.1e-16
Identity = 57/162 (35.19%), Postives = 95/162 (58.64%), Query Frame = 0


Query: 8   RIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAAAVIGGVL 67
           ++  L+LR+LT + + I+LII +TNS T+     +  K  FK+VY+YRY+++AAVIG V 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTI-VSQGSALKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLIQIILSIYHMVTKSEGTPLFY---LFSDYLLSYLLLSSSSAALGAGIDMRANLKELFG 127
           ++IQ+  +I    T  +  P  Y    + D L+SYL+ + S+A  G   D++     L  
Sbjct: 74  AVIQLFFTISEFATGVK-NPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVA 133

Query: 128 ----TLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRK 163
                  D FF +G  +A++L  AF+C AV+S+ S+ A+ ++
Sbjct: 134 LDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

The following BLAST results are available for this feature:

BLAST of CmoCh04G027620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9NBE5	1.5e-19	36.53	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
B9SXY8	4.5e-19	39.26	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
C6T1Z6	2.1e-16	34.94	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
D7LD60	3.0e-15	37.13	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
Q8GWD5	3.9e-15	38.04	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]

BLAST of CmoCh04G027620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HET3	2.1e-75	100.00	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1	[more]
A0A6J1JSF8	2.1e-72	96.32	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1	[more]
A0A6J1C1A4	5.3e-55	73.62	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]
A0A6J1JJD2	1.4e-52	73.62	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1	[more]
A0A6J1GRM4	1.9e-52	74.23	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1	[more]

BLAST of CmoCh04G027620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963262.1	4.3e-75	100.00	CASP-like protein 4D1 [Cucurbita moschata] >KAG6602371.1 CASP-like protein 4D1, ...	[more]
XP_022990589.1	4.4e-72	96.32	CASP-like protein 4D1 [Cucurbita maxima]	[more]
KAG7033050.1	2.0e-69	96.23	CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022134193.1	1.1e-54	73.62	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_038877614.1	5.4e-54	74.53	CASP-like protein 4D1 [Benincasa hispida]	[more]

BLAST of CmoCh04G027620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39530.1	2.8e-16	38.04	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	8.1e-16	35.19	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..147 e-value: 2.8E-25 score: 88.9
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 4..162
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 4..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G027620.1	CmoCh04G027620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding