CmoCh04G027510 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G027510
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionActin-depolymerizing factor
LocationCmo_Chr04: 19910171 .. 19913663 (+)
RNA-Seq ExpressionCmoCh04G027510
SyntenyCmoCh04G027510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGGTTTCTTAGCCGTCTGGGTGATATTATCAATCGCCACCACCCTCCGGGTGAATGGCTTCCACAATTATTATTATTTTATAATTTATATATATATATATATCTTAATTATTTTTTTAATATTAGCAGTCGAATCTCTTAGGCCTTGCGCGGTACAGCCCTCGTTTCCCATCCCATCGTCTTCCTCTCTTCACCCACGCTTCTATCTTCTTTATCGTCTCGTCTGTGGAAGCCCTAAATTTTCTCAACCTTTCTCGCCCTTTCTTTCGCTTTCTCGGGAAAATGGTGAGCTTTTCCTCTTCTTTTCCCTTTTCGATTCATTTTGTCTGGCTTAGTTTTGTTGATTATTGTTCTTTTTTCTTTTTTTTTCCATTAGTTAATTTGTTTGTTTATTTTTCTCTTCTATGTTTTTCTATTCGATCCTTGGAGTTTTTCTATTCGATCCTTGGAGTTCTTGGCTGTTTTGAAACGGAATCCTTGTAAATCGCTGCATCGATTGATTGTTGTTCATTTTCGTCCGCTTGTTTAGTGTTTCAATGGCCTTGGATTGTTGATTATATTGAATACCATGCATTGTTAGCGAGTGGCTAAAAGCATTGGCCACCGTTGATGTAAATCGACTTATTACGTTCTCGTACATTGATCCCTGTTTTCACTGGGACCTTGTGTTGTGACTTCACTTTAAATCCTTTAGTTTATTATTATTTTTAATATTTTCCCCTGCCCGTTAATGATGATAATTGTGAGATGTTTGCTTCATCTCAGTGGTTTAAACATTGGCATTTTTGTTGATGGATATGATTCTTATATTGAGATATTTTGCATTGTGTTACCTGAAAGTGTATGATGATTTATCACAAGTTTATATAATTTGGAAACCTTCTATTGACGAAGTTGGAAAAGAAGACTGAAGGGTATTGGATTGGAAAGGAAAACATCTATTTAACTATTTCAATAGAGGTTTATTATCATCGGTCCATCTCATTTTGGTATGGTCATTGTCAAAACTCCTTCATGGATCCAAGTTATTTCACTTTGGGATAGTCCATGAGTCGCCCTCTTCTCCCTCAATGTTGTTCATCCTTTGTGATTTTCCTTTATTTCTTAGTTTGCTTCTCCCTTATCACCATCACCATTAGCGCGTTTGTTAGGAAATGGGGATAGGACGCTTGTTGGCATAGACTATAGAGCTAAGCATCATATTTGAAGGTGTGATTTGTTTCAGAATTAAAAAGTTGTGGCTCTAGAATTTCAGGGAGGAGCTGGTTAAAATTGTTCTCCTAAACACTAGAGACTAGGGTCACTGTTGGATACAATGACAATAAGAAACGAGTAATGAGAAAAGGTCAGAGGTTCAAATCCCCCCTGCATATTTTCGAACTAAAAAAAAGGATGATTTTTTTCTCTCCCTACTTCTATCATACTGTAATAAAGTGTTAGGTTTCTTATAAAAAAAAAAAGAAAAAAAAAAGGGAAACAAAAAGGATTTAGGGGTTTTACCAAAGGGATGTTCATACAGTAAGAGGACTTCTATAAAAAAGAAACTAGGATCAGATCCCTCTTGCAGGTGCATTGTTATATGAACTTGATTTCTGGGGGCTCTGTTTGTAAATATGATTTTCATGTTAGTGTTTAGTAGCATAACATGGATATTAACTACAATGATGAAAACTCCTTGGTAGGGGAAACTCGAATGGAAGTTGATTGTCATCTAACCAAAGAACTAGCTTCAAAGTTTGACCCCCAAGCCTACGTGTTGTTAGGGAATTCCCCAAACACTTCGCTGATGCTAATAACTTGAATGGGTCACTTTTGAGAGATTGATGTTTAGTGTTATGCCCTATTCACCACAGAGCCACTTACATTCCATAAAGAGTAGGGGAATTGTTTGAAGTCTAGGCCTCCAGAGCCACTTACATTCCATCTCAAAGTTCTCATGGGACATTTGTACACCTTATGAGTCAACTTTGGCCCACATTGTTTTTCCTTGGAAAAAAAAAAAAAGGATATGCCTATCATCAAATAAAAAGCTAATTCAATTATGAAAAGGATGTTTTATGTACAGATAAAACTTCATCTTGTTAACTTATGCGAAGATTGAATTAGCTTTTTATAATTGAATTAGCTTTTTATTATTGAATTAGCTTTTTATTTGATGATAGGCATATCTTTTCTTTTTTTTTTTTTCCAAGGAAAAACAATGTGGGCCAAAGTTGACTCATAAGGTGTACAAATATAGATTAGACTTCTTCTGATAATTTCACCAACGAAAAAGATTATTTCTAGGTGGCTAGTTTTGATGCATATTTCTCTATGGAAATCTGAGGCAGATTCTTCGTTTCAAGAACTGAAAGCTTGGAAAACATTGAGTGAGTTTGGGTCTTTAAATCCGTTGTCATAGTATCCTGATGGATGTTCAATAGGGTTTCTGAAGAAAATAGGACTTCATAATTTACATTTGTAAATCAATTTATCACAGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAAGTCGTGGTGGAAAAGCTTGGCGAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTACCTGCTGATGAATGCCGATATGCGGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAAAGCAGGATTATATTCATTGCCTGGTAAATGTACTACAAACGATTTCCTCACTCATTTTATGAATCTGCATTCTAACTCATCATCTATCAAATGCGATGTTTGAAGGTCTCCTGATACGTCAAGGGTGAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTGGACGGCATTCAAGTGGAGTTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTTGTAGGAGGATTTGGCCGGCGAGTCATTGTGATGCAGAGCTGATGTTAATTACGTGAAATGTTCATAGATTGTGGGCTCGAAACTTGCTTTTATGCTATATGATATTGGCTTGTTCTTGAAAAGTTTCACCTAAGAGTTGTAAGGATGACTGCTTTTTTTGGCTTTCGTGGATTTAGTTGGTTGGATATTTTAAATGTGGCTGTGGGGTTTTACCGTCGATTACTTATGCAGGGTAAATATGGATCAATGCCCGTTTGAGTTTGTGAGGTTGGTTTTATGAAGAGAACCACTAGGAATAATTTGCAATGATTTTCGAGTTTCATGTGTTCCATTTTTTCTTATCCAAATCATTTCATGATTTCGTGTCATGACTTGCTATATCTTTGTGTTAGGCATACGTTTTCTGTGGAACTCTTCCAGTTCATGAATTTAAGGGTCGGATGCTTATTTTAATAGGTTTCTCGTTTAATGTCTAATAAGTTATTGAACTTTAACGTCACGTTTTATGCCCG

mRNA sequence

ATGTTCGGTTTCTTAGCCGTCTGGGTGATATTATCAATCGCCACCACCCTCCGGTCGAATCTCTTAGGCCTTGCGCGGTACAGCCCTCGTTTCCCATCCCATCGTCTTCCTCTCTTCACCCACGCTTCTATCTTCTTTATCGTCTCGTCTGTGGAAGCCCTAAATTTTCTCAACCTTTCTCGCCCTTTCTTTCGCTTTCTCGGGAAAATGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAAGTCGTGGTGGAAAAGCTTGGCGAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTACCTGCTGATGAATGCCGATATGCGGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAAAGCAGGATTATATTCATTGCCTGGTCTCCTGATACGTCAAGGGTGAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTGGACGGCATTCAAGTGGAGTTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTTGTAGGAGGATTTGGCCGGCGAGTCATTGTGATGCAGAGCTGATGTTAATTACGTGAAATGTTCATAGATTGTGGGCTCGAAACTTGCTTTTATGCTATATGATATTGGCTTGTTCTTGAAAAGTTTCACCTAAGAGTTGTAAGGATGACTGCTTTTTTTGGCTTTCGTGGATTTAGTTGGTTGGATATTTTAAATGTGGCTGTGGGGTTTTACCGTCGATTACTTATGCAGGGTAAATATGGATCAATGCCCGTTTGAGTTTGTGAGGTTGGTTTTATGAAGAGAACCACTAGGAATAATTTGCAATGATTTTCGAGTTTCATGTGTTCCATTTTTTCTTATCCAAATCATTTCATGATTTCGTGTCATGACTTGCTATATCTTTGTGTTAGGCATACGTTTTCTGTGGAACTCTTCCAGTTCATGAATTTAAGGGTCGGATGCTTATTTTAATAGGTTTCTCGTTTAATGTCTAATAAGTTATTGAACTTTAACGTCACGTTTTATGCCCG

Coding sequence (CDS)

ATGTTCGGTTTCTTAGCCGTCTGGGTGATATTATCAATCGCCACCACCCTCCGGTCGAATCTCTTAGGCCTTGCGCGGTACAGCCCTCGTTTCCCATCCCATCGTCTTCCTCTCTTCACCCACGCTTCTATCTTCTTTATCGTCTCGTCTGTGGAAGCCCTAAATTTTCTCAACCTTTCTCGCCCTTTCTTTCGCTTTCTCGGGAAAATGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAAGTCGTGGTGGAAAAGCTTGGCGAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTACCTGCTGATGAATGCCGATATGCGGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAAAGCAGGATTATATTCATTGCCTGGTCTCCTGATACGTCAAGGGTGAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTGGACGGCATTCAAGTGGAGTTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTTGTAG

Protein sequence

MFGFLAVWVILSIATTLRSNLLGLARYSPRFPSHRLPLFTHASIFFIVSSVEALNFLNLSRPFFRFLGKMANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASLPADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRSGL
Homology
[Close]
BLAST of CmoCh04G027510 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 9.7e-67
Identity = 123/139 (88.49%), Postives = 134/139 (96.40%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKL+FL+LKAKRTYRFI++KIEEKQK+VVVEKLGEP++SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDF+T+EN QKSRI FIAWSPDT+RVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSG 209
           LQATDPTEMGLDV RSR+G
Sbjct: 121 LQATDPTEMGLDVFRSRAG 139

[Close]
BLAST of CmoCh04G027510 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.3e-66
Identity = 123/138 (89.13%), Postives = 133/138 (96.38%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+GEP++SYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           P +ECRYAVYDFDFVT ENCQKSRI FIAW PDT+RVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQA DPTEMGLDVI+SR+
Sbjct: 121 LQACDPTEMGLDVIQSRA 138

[Close]
BLAST of CmoCh04G027510 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 245.4 bits (625), Expect = 5.9e-64
Identity = 118/137 (86.13%), Postives = 130/137 (94.89%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSR 207
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]
BLAST of CmoCh04G027510 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.3e-63
Identity = 118/138 (85.51%), Postives = 130/138 (94.20%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTEM LDV RSR+
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]
BLAST of CmoCh04G027510 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-62
Identity = 115/138 (83.33%), Postives = 132/138 (95.65%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAV D+CKL+FL+LKAKRTYRFI++KI+EK+K VVVEK+GEP  +Y+DFAASL
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PA+ECRYA++D+DFVTEENCQKS+I FIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTE+GLDVIR R+
Sbjct: 121 LQATDPTEVGLDVIRGRA 138

[Close]
BLAST of CmoCh04G027510 vs. ExPASy TrEMBL
Match: A0A6J1JTE7 (actin-depolymerizing factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111487332 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.0e-71
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSGL 210
           LQATDPTEMGLDVIRSRSGL
Sbjct: 121 LQATDPTEMGLDVIRSRSGL 140

[Close]
BLAST of CmoCh04G027510 vs. ExPASy TrEMBL
Match: A0A6J1E2L4 (actin-depolymerizing factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111430219 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.0e-71
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSGL 210
           LQATDPTEMGLDVIRSRSGL
Sbjct: 121 LQATDPTEMGLDVIRSRSGL 140

[Close]
BLAST of CmoCh04G027510 vs. ExPASy TrEMBL
Match: A0A1S3CJB1 (actin-depolymerizing factor 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501640 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.4e-70
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPS+SYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSG 209
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]
BLAST of CmoCh04G027510 vs. ExPASy TrEMBL
Match: A0A6J1K1F6 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489270 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.3e-69
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRT+RFIVFKIEEK KQVVVEKLGEPSQSYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSG 209
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]
BLAST of CmoCh04G027510 vs. ExPASy TrEMBL
Match: A0A0A0KNQ1 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G512870 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.3e-69
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PS+SYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSG 209
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]
BLAST of CmoCh04G027510 vs. NCBI nr
Match: XP_022922159.1 (actin-depolymerizing factor 2 [Cucurbita moschata] >XP_022990483.1 actin-depolymerizing factor 2 [Cucurbita maxima] >KAG6602360.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033039.1 Actin-depolymerizing factor 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 279.6 bits (714), Expect = 2.1e-71
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSGL 210
           LQATDPTEMGLDVIRSRSGL
Sbjct: 121 LQATDPTEMGLDVIRSRSGL 140

[Close]
BLAST of CmoCh04G027510 vs. NCBI nr
Match: XP_023534804.1 (actin-depolymerizing factor 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.1 bits (710), Expect = 6.2e-71
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PSQSYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSGL 210
           LQATDPTEMGLDVIRSRSGL
Sbjct: 121 LQATDPTEMGLDVIRSRSGL 140

[Close]
BLAST of CmoCh04G027510 vs. NCBI nr
Match: XP_008463478.1 (PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo] >XP_008463479.1 PREDICTED: actin-depolymerizing factor 2 isoform X2 [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 9.0e-70
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPS+SYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSG 209
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]
BLAST of CmoCh04G027510 vs. NCBI nr
Match: XP_038891099.1 (actin-depolymerizing factor 2 [Benincasa hispida])

HSP 1 Score: 273.9 bits (699), Expect = 1.2e-69
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSG 209
           LQATDP+EMGLDVIRSRSG
Sbjct: 121 LQATDPSEMGLDVIRSRSG 139

[Close]
BLAST of CmoCh04G027510 vs. NCBI nr
Match: XP_022938587.1 (actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_022993173.1 actin-depolymerizing factor 2-like [Cucurbita maxima] >XP_023550781.1 actin-depolymerizing factor 2-like [Cucurbita pepo subsp. pepo] >KAG6578715.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016246.1 Actin-depolymerizing factor 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272.7 bits (696), Expect = 2.6e-69
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRT+RFIVFKIEEK KQVVVEKLGEPSQSYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSG 209
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

[Close]
BLAST of CmoCh04G027510 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 246.5 bits (628), Expect = 1.9e-65
Identity = 119/144 (82.64%), Postives = 132/144 (91.67%), Query Frame = 0 

Query: 64  FRFLGKMANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYE 123
           F  L + ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE
Sbjct: 6   FHLLSRSANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYE 65

Query: 124 DFAASLPADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKREL 183
           +FAA LPADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKREL
Sbjct: 66  EFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKREL 125

Query: 184 DGIQVELQATDPTEMGLDVIRSRS 208
           DGIQVELQATDPTEM LDV RSR+
Sbjct: 126 DGIQVELQATDPTEMDLDVFRSRA 149

[Close]
BLAST of CmoCh04G027510 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 245.4 bits (625), Expect = 4.2e-65
Identity = 118/137 (86.13%), Postives = 130/137 (94.89%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSR 207
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]
BLAST of CmoCh04G027510 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 244.2 bits (622), Expect = 9.3e-65
Identity = 118/138 (85.51%), Postives = 130/138 (94.20%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTEM LDV RSR+
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]
BLAST of CmoCh04G027510 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 237.7 bits (605), Expect = 8.7e-63
Identity = 114/138 (82.61%), Postives = 129/138 (93.48%), Query Frame = 0 

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKL+F++LKAKRT+R IV+KIE+  KQV+VEKLGEP QSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PAD+CRY +YDFDFVT ENCQKS+I FIAWSPDT++VR KMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTEMGLDV +SR+
Sbjct: 121 LQATDPTEMGLDVFKSRT 136

[Close]
BLAST of CmoCh04G027510 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 232.3 bits (591), Expect = 3.7e-61
Identity = 111/130 (85.38%), Postives = 123/130 (94.62%), Query Frame = 0 

Query: 77  MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASLPADECRY 136
           MAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YEDFAASLPADECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 137 AVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 196
           A+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 197 EMGLDVIRSR 207
           EM LDV++SR
Sbjct: 121 EMDLDVLKSR 130

The following BLAST results are available for this feature:
BLAST of CmoCh04G027510 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FVI19.7e-6788.49Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1[more]
Q9FVI26.3e-6689.13Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1[more]
Q9ZSK35.9e-6486.13Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2[more]
Q392501.3e-6385.51Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1[more]
Q0DLA31.1e-6283.33Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P... [more]
BLAST of CmoCh04G027510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JTE71.0e-71100.00actin-depolymerizing factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111487332 PE=3 S... [more]
A0A6J1E2L41.0e-71100.00actin-depolymerizing factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111430219 PE=3... [more]
A0A1S3CJB14.4e-7097.84actin-depolymerizing factor 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501640... [more]
A0A6J1K1F61.3e-6997.84actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489270 P... [more]
A0A0A0KNQ11.3e-6997.12ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G512870 PE=3 ... [more]
BLAST of CmoCh04G027510 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022922159.12.1e-71100.00actin-depolymerizing factor 2 [Cucurbita moschata] >XP_022990483.1 actin-depolym... [more]
XP_023534804.16.2e-7199.29actin-depolymerizing factor 2 [Cucurbita pepo subsp. pepo][more]
XP_008463478.19.0e-7097.84PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo] >XP_008463479... [more]
XP_038891099.11.2e-6997.84actin-depolymerizing factor 2 [Benincasa hispida][more]
XP_022938587.12.6e-6997.84actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_022993173.1 actin-de... [more]
BLAST of CmoCh04G027510 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G46010.21.9e-6582.64actin depolymerizing factor 1 [more]
AT5G59890.14.2e-6586.13actin depolymerizing factor 4 [more]
AT3G46010.19.3e-6585.51actin depolymerizing factor 1 [more]
AT3G46000.18.7e-6382.61actin depolymerizing factor 2 [more]
AT5G59890.23.7e-6185.38actin depolymerizing factor 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 81..208
e-value: 1.8E-58
score: 210.2
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 83..205
e-value: 6.8E-37
score: 126.0
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 74..208
score: 38.823349
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 66..208
e-value: 1.6E-52
score: 179.6
NoneNo IPR availablePANTHERPTHR11913:SF74ACTIN-DEPOLYMERIZING FACTOR 2-LIKEcoord: 41..207
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 70..206
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 41..207
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 75..206
e-value: 2.18907E-69
score: 206.254

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G027510.1CmoCh04G027510.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0051015 actin filament binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003779 actin binding