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CmoCh04G027280 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTTTATTTTTGTAAATTATAAATATTTTTACTAATGGATCATTTATTTTTATTATACTTTTTACGCATTTTTAAAAAATTAAATAAAGTTTTAAAATTAAAAAAAAAAAGTAGATTTTATTTTTGGGAATTTTGACAAGAATTTATTTAAAAATAAGAAATAGAATTTTTAAAATTTTCATATTTTCGTCAATTTCCTAAAAAAAAAAAAAAAGAGAAATAGGTTGGTAAAGCAAGTGAAGTACTTGGGCTCGAGGCCCACAGCCCAAACGACGAAAGAGTAATGTGGCCCATGATCGGTGAATGTGAAGGAATCTGCACCGTCCATTGGATCCCATAGTTCCTGTTTAAGTGACGGTCACGATTTCACGATTCGTTTTCACGAGTTTTTGCCTTGCTTTCAATTTTCCATCTTCCATTTCTGCTCTGGTGCTCCCATTGCATCCCCACCGCTCTCTATTTGATGTTCTCGCGCGCCTTCTTCACGTAGAGCTCGGGGAAAACTTCACATTGAACGAGGAAGCAGAGCAGCGAAGGAGGAGTGGACGAAGATGGACGATTATACGAGAGAAATGATGGACTTGAAGACCCTCGTCACTCGGACTCTCGAGAAGAAGGGCGTCCTCGCCAAGATCCGTGTAATTCCTTTACTTTTTCCGTCGCATTCTTGAATTTTAAGCTGTTGTTTCGTTCAGATTTTCATCTCTTCCTTCCGCTACAGATCTTCTACTCGTGTTATTTGTTCTAGATTTCTCGGAATTTGGGGGTACTTGTGCTGTTGGTTGGTGAGGACTACAGAATGAGATAGGTTTAAGCTAGGGTTTTGTTTCTACCTTCAGATTTGGAAGGACGTAGGATGGAGGACAGTGAATAATTCTTCGTCTTTCTCTTTTTTTAGCGTGAAGCTGGTTGGAATTGCAATGCAATAACTTCGAAAATTGGATCACCCTCCTAAGCTTTCAGCTATATTTTATGAATGAATTTAGGGTGTTCTAGAGCTACGGGATCTTGAACTGATTGAGAAGATAATTTCTTATATGTTCCCTGATGTAATGTTCTGTCTTTCAGCTTGTTCCCATTTTTTCATACGCTTCGATTATTATTCTCGAGTTATATTCAGCTTCGACGTTGATCTGGTGTAGGAGTCTTTATTATATACTAGTTTTGAAGAAAGATTTAATCGAAGTTCTTGAATTATCTCAGCGTACATTTCTTTTCTTCAGGCTGAACTTAGAGCTAGTGTATTTGAGGCAATTGAAGAAGAGGATCGTGTAATTGAGAAAGACGAAGGCTTGCCACCTGCATTACTCGGTAGTTGCAATGATCGAGCAAAACAGCTTCATGCTTCACCATCAGGTTCGACTACAAATACTATAAAATCAAAATAATTTATGTTGTCCAGCTTGATATAATGTGCCCCAATAATTGCTAATGGGATTTTTATAGTGCCTTCCATTGGTTTATAGATAATTGAAGTTACAAATCTAAGATGTAAAATTTTCGTGTGTAGGGTCCGATAAGGGTCAAGGGTGAACTGGATTATTTTTTAGTTTGATTCAGTACTTGAAGTAATCTAATTTTAATTGCAGGGAGGCTGCTTACTGCTCTAATATGTGAATATTTAGATTGGGCTCAGCTAAACCACACTCTAAAAGTTTATCTCCCAGAGTGCAATATGGTAATCGAGCACGTTGTCCCTTCATATGTTTCAAGTCCTACAATGACCCCCACACCCCCCCGAGAAAAAAAGAAAAGAAAAAAAGAGGAAATCAGACCCAAAAAAGAAGGATATAAGAAGTAATATGAATTCTAATGTCTTTTAATTCTGCAGCAAAAAGATTCTTGGAAAGCTGAATTGAAGGAATTTAGTAGTAAAAACGGATACGATCTTAACAGAAATGGAGATAGTGGACCGTTGCTCTTGGATGTTCTTGAGGGATTCTTGAAATTTGAGGTTAGTTGGATCTTAACAGAAACGTTTGAATGTCTTAATTACAAAATTGAAATCTTCATGGTGTATATATTTCATATTATTATTTCATACAAACAAAAAAAAAACTTCTACTGCCAACTACATTACGTGTATATTTCCCCTCTGCACTGGATAGCCAGATGTTTGCCTTGGGAACTTATCTTCTTCATCTTTTTGTTCAAAAAATCAGAACTTATCTCAAACAAGGGTTCCCGGAAGGAGAGTAACCGCTTCAGAATCTGATTCAATGTCCAGTCACGAGTCCCGAAATAGTAGGAGACCTTCATCATCTGTTGTAGGGGGTTTACCTCCAGTAGGAAGGTGAATACCTGCCTGAACTAATAATATAGCTTCCTTCCCTTACCAAATTTTTACTACTTTCCTTTTTGCATTAACACTGTTGTATATTTTTATTTCAGAACTGGTGCTGGTTCACAGGCGTCTGGTAAGTCATGTAGCTATTTCATATATGGTTATCTGCTTCCTCTTATTTGTTTATGTGATGATTTAAGCTTTCAGATAGGAGGGTAGGATCTTCAATGTCTGGTTATCGAAAAGATGAATACAGTTGGAGATACGATGGCAATGAGCTTCCTGAGGATGTAATCAGAGCCTCTGCTGCTTTGGAAAACCTGCAACTGGATCGAAAAGCTAGAAATCTAACCTCATCCTGGCGGTATGTGTGCATATTTACGCTTTCCTTTTCTCTTTCTGGAAAATTATGACTGTTTGATTGTGTGTGTATTTATTTTACTTTTTTGTCGTCAGAAAATTTCTTCTTAAAAAAAATATATACCTGCTTATTTGATTGAACTACCTCTTTCATTTAGATGCATTACTGTCCAAAACCCACCCACTACAACATATGGTCATTTCCTTCAGTGTCCAGGTTTGAAACTCCATGTCCACAAAGTGTTTCATTCTGGTACAACACCCACCAACTAGGCTAAATACATGTTGGAAAAGCTTTAAATGGCATCGATGGTGTCAGCACTCCCCAGGATTCCAACCAGGGATTTTCAGCTTCCACAACCTGTGGAAAAGGGGGCACAGCCCTGAATGGGTGTGAAAGGAACTACAAGTTAAAACCCTGGGAGTTCAAACCTGCACAATCTTTCATCCCTGCGCCAAGAACGAACACAGATTGAAAAAAAGTGAAGTTAGCCAGTTCTCTTACCAAGGAATTGCATCTAAACCTAAAAACCAAAACAAGGTGGTTTGCTCCTCTTAAAAGGAAATCTTCTGCTTGGAATATAGACATTTACACACTAGCACTACCTTTGTCTTCGAGGATCTCGCTATTCCTTGGAAGAGGCAAATAACAGGAGTTCGGCTGCAACTCAAAGGGGCGTTTAGCCCCATTAATCTCATCCTTCTTAGGACAAAAGAAAATTATTTCATCTCTGATTTAAAGGAGTGGTAGGGACAAAGGGGCATCACTCTGCCCCACCCATCTAGTAGTAAAAAATTTACCAACTCCCAATGGGGTTCAACTGCTTCCCATTTTCTTTAATTCCATTGAATTAACTTCTGTACGGCCTGTTATTCTAAAATCATATTTCTATATTGCAGACATGGGGGAGACGGACACAGTGAGGATGATAACAGAGGTGAACATATGTAACATTGAAATCATGTATTCTATTTCTTAACCTGTCCACAATGATCAAGCGAGGGTAGTGTTGATGTCGAAGATTATGTAATTTGACGTGTTTAAAATGTTTGTTTAGTTTTACCCCTTTCTGTTACTATGGACTCTTTTTAATTCTTTTGACAAACTCTCAAGCCCTGCTGTAG ATGATTTTATTTTTAGCTCGGGGAAAACTTCACATTGAACGAGGAAGCAGAGCAGCGAAGGAGGAGTGGACGAAGATGGACGATTATACGAGAGAAATGATGGACTTGAAGACCCTCGTCACTCGGACTCTCGAGAAGAAGGGCGTCCTCGCCAAGATCCGTGCTGAACTTAGAGCTAGTGTATTTGAGGCAATTGAAGAAGAGGATCGTGTAATTGAGAAAGACGAAGGCTTGCCACCTGCATTACTCGGTAGTTGCAATGATCGAGCAAAACAGCTTCATGCTTCACCATCAGGGAGGCTGCTTACTGCTCTAATATGTGAATATTTAGATTGGGCTCAGCTAAACCACACTCTAAAAGTTTATCTCCCAGAGTGCAATATGCAAAAAGATTCTTGGAAAGCTGAATTGAAGGAATTTAGTAGTAAAAACGGATACGATCTTAACAGAAATGGAGATAGTGGACCGTTGCTCTTGGATGTTCTTGAGGGATTCTTGAAATTTGAGAACTTATCTCAAACAAGGGTTCCCGGAAGGAGAGTAACCGCTTCAGAATCTGATTCAATGTCCAGTCACGAGTCCCGAAATAGTAGGAGACCTTCATCATCTGTTGTAGGGGGTTTACCTCCAGTAGGAAGAACTGGTGCTGGTTCACAGGCGTCTGATAGGAGGGTAGGATCTTCAATGTCTGGTTATCGAAAAGATGAATACAGTTGGAGATACGATGGCAATGAGCTTCCTGAGGATGTAATCAGAGCCTCTGCTGCTTTGGAAAACCTGCAACTGGATCGAAAAGCTAGAAATCTAACCTCATCCTGGCGACATGGGGGAGACGGACACAGTGAGGATGATAACAGAGGTGAACATATATTATGTAATTTGACGTGTTTAAAATGTTTGTTTAGTTTTACCCCTTTCTGTTACTATGGACTCTTTTTAATTCTTTTGACAAACTCTCAAGCCCTGCTGTAG ATGATTTTATTTTTAGCTCGGGGAAAACTTCACATTGAACGAGGAAGCAGAGCAGCGAAGGAGGAGTGGACGAAGATGGACGATTATACGAGAGAAATGATGGACTTGAAGACCCTCGTCACTCGGACTCTCGAGAAGAAGGGCGTCCTCGCCAAGATCCGTGCTGAACTTAGAGCTAGTGTATTTGAGGCAATTGAAGAAGAGGATCGTGTAATTGAGAAAGACGAAGGCTTGCCACCTGCATTACTCGGTAGTTGCAATGATCGAGCAAAACAGCTTCATGCTTCACCATCAGGGAGGCTGCTTACTGCTCTAATATGTGAATATTTAGATTGGGCTCAGCTAAACCACACTCTAAAAGTTTATCTCCCAGAGTGCAATATGCAAAAAGATTCTTGGAAAGCTGAATTGAAGGAATTTAGTAGTAAAAACGGATACGATCTTAACAGAAATGGAGATAGTGGACCGTTGCTCTTGGATGTTCTTGAGGGATTCTTGAAATTTGAGAACTTATCTCAAACAAGGGTTCCCGGAAGGAGAGTAACCGCTTCAGAATCTGATTCAATGTCCAGTCACGAGTCCCGAAATAGTAGGAGACCTTCATCATCTGTTGTAGGGGGTTTACCTCCAGTAGGAAGAACTGGTGCTGGTTCACAGGCGTCTGATAGGAGGGTAGGATCTTCAATGTCTGGTTATCGAAAAGATGAATACAGTTGGAGATACGATGGCAATGAGCTTCCTGAGGATGTAATCAGAGCCTCTGCTGCTTTGGAAAACCTGCAACTGGATCGAAAAGCTAGAAATCTAACCTCATCCTGGCGACATGGGGGAGACGGACACAGTGAGGATGATAACAGAGGTGAACATATATTATGTAATTTGACGTGTTTAAAATGTTTGTTTAGTTTTACCCCTTTCTGTTACTATGGACTCTTTTTAATTCTTTTGACAAACTCTCAAGCCCTGCTGTAG MILFLARGKLHIERGSRAAKEEWTKMDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGSCNDRAKQLHASPSGRLLTALICEYLDWAQLNHTLKVYLPECNMQKDSWKAELKEFSSKNGYDLNRNGDSGPLLLDVLEGFLKFENLSQTRVPGRRVTASESDSMSSHESRNSRRPSSSVVGGLPPVGRTGAGSQASDRRVGSSMSGYRKDEYSWRYDGNELPEDVIRASAALENLQLDRKARNLTSSWRHGGDGHSEDDNRGEHILCNLTCLKCLFSFTPFCYYGLFLILLTNSQALL Homology
BLAST of CmoCh04G027280 vs. ExPASy Swiss-Prot
Match: Q9FQ25 (Protein TONNEAU 1a OS=Arabidopsis thaliana OX=3702 GN=TON1A PE=1 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 9.6e-98 Identity = 190/261 (72.80%), Postives = 215/261 (82.38%), Query Frame = 0
BLAST of CmoCh04G027280 vs. ExPASy Swiss-Prot
Match: Q9FQ24 (Protein TONNEAU 1b OS=Arabidopsis thaliana OX=3702 GN=TON1B PE=1 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 6.9e-96 Identity = 187/259 (72.20%), Postives = 214/259 (82.63%), Query Frame = 0
BLAST of CmoCh04G027280 vs. ExPASy Swiss-Prot
Match: O95684 (Centrosomal protein 43 OS=Homo sapiens OX=9606 GN=CEP43 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 9.9e-10 Identity = 46/132 (34.85%), Postives = 77/132 (58.33%), Query Frame = 0
BLAST of CmoCh04G027280 vs. ExPASy Swiss-Prot
Match: Q4R7V3 (Centrosomal protein 43 OS=Macaca fascicularis OX=9541 GN=CEP43 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-08 Identity = 60/216 (27.78%), Postives = 105/216 (48.61%), Query Frame = 0
BLAST of CmoCh04G027280 vs. ExPASy Swiss-Prot
Match: Q4V7C1 (Centrosomal protein 43 OS=Rattus norvegicus OX=10116 GN=Cep43 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-08 Identity = 59/201 (29.35%), Postives = 101/201 (50.25%), Query Frame = 0
BLAST of CmoCh04G027280 vs. ExPASy TrEMBL
Match: A0A6J1GL12 (protein TONNEAU 1a-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455337 PE=4 SV=1) HSP 1 Score: 526.6 bits (1355), Expect = 7.5e-146 Identity = 264/265 (99.62%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of CmoCh04G027280 vs. ExPASy TrEMBL
Match: A0A6J1JMY8 (protein TONNEAU 1a-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487297 PE=4 SV=1) HSP 1 Score: 515.0 bits (1325), Expect = 2.3e-142 Identity = 258/265 (97.36%), Postives = 260/265 (98.11%), Query Frame = 0
BLAST of CmoCh04G027280 vs. ExPASy TrEMBL
Match: A0A6J1GML6 (protein TONNEAU 1b-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455337 PE=4 SV=1) HSP 1 Score: 512.7 bits (1319), Expect = 1.1e-141 Identity = 260/265 (98.11%), Postives = 261/265 (98.49%), Query Frame = 0
BLAST of CmoCh04G027280 vs. ExPASy TrEMBL
Match: A0A6J1JIR4 (protein TONNEAU 1b-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487297 PE=4 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 3.4e-138 Identity = 254/265 (95.85%), Postives = 256/265 (96.60%), Query Frame = 0
BLAST of CmoCh04G027280 vs. ExPASy TrEMBL
Match: A0A6J1BX29 (protein TONNEAU 1b-like OS=Momordica charantia OX=3673 GN=LOC111006471 PE=4 SV=1) HSP 1 Score: 500.7 bits (1288), Expect = 4.4e-138 Identity = 251/265 (94.72%), Postives = 257/265 (96.98%), Query Frame = 0
BLAST of CmoCh04G027280 vs. NCBI nr
Match: XP_022952731.1 (protein TONNEAU 1a-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 526.6 bits (1355), Expect = 1.6e-145 Identity = 264/265 (99.62%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of CmoCh04G027280 vs. NCBI nr
Match: XP_023540391.1 (protein TONNEAU 1a-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 525.0 bits (1351), Expect = 4.5e-145 Identity = 263/265 (99.25%), Postives = 264/265 (99.62%), Query Frame = 0
BLAST of CmoCh04G027280 vs. NCBI nr
Match: KAG7033021.1 (Protein TONNEAU 1b [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 518.8 bits (1335), Expect = 3.2e-143 Identity = 264/274 (96.35%), Postives = 265/274 (96.72%), Query Frame = 0
BLAST of CmoCh04G027280 vs. NCBI nr
Match: XP_022990441.1 (protein TONNEAU 1a-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 515.0 bits (1325), Expect = 4.7e-142 Identity = 258/265 (97.36%), Postives = 260/265 (98.11%), Query Frame = 0
BLAST of CmoCh04G027280 vs. NCBI nr
Match: XP_022952739.1 (protein TONNEAU 1b-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 512.7 bits (1319), Expect = 2.3e-141 Identity = 260/265 (98.11%), Postives = 261/265 (98.49%), Query Frame = 0
BLAST of CmoCh04G027280 vs. TAIR 10
Match: AT3G55000.1 (tonneau family protein ) HSP 1 Score: 358.2 bits (918), Expect = 6.8e-99 Identity = 190/261 (72.80%), Postives = 215/261 (82.38%), Query Frame = 0
BLAST of CmoCh04G027280 vs. TAIR 10
Match: AT3G55005.1 (tonneau 1b (TON1b) ) HSP 1 Score: 352.1 bits (902), Expect = 4.9e-97 Identity = 187/259 (72.20%), Postives = 214/259 (82.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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