CmoCh04G027060 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G027060
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	rhomboid-like protein 19
Location	Cmo_Chr04: 19666286 .. 19670249 (+)
RNA-Seq Expression	CmoCh04G027060
Synteny	CmoCh04G027060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAAAGAAACTGTAATCAGAAGTATTCATGATCTGGATTATCCGCACGGGGTGCACCATAATACTGTACGCCTCACCGCACCCAATACCCAACTCTTCCACGTTACGATCTTCGAAGCTCGAGCCAAGACCCACCTCCTCTGTAACCCAAAAGTCTCCCGCGAAGCAAAACAGTCCATTTTTAGCACACAACTCCGATCACCGTCGTCCACGGTCTATTTCAACGGTCACTATCCACCGTCTCTGCATATGAGTACTCCAGCAGTACCGGGGGTAAGCTCCGTTACAATTGTTTGTTTTAATCTTCTCCAAATTGGCGGTCGATCAGTCGCATTCAGATCTCGCAGTTCGTCTTTTCTATCTCGGAACGTGTATGCTAGATCTTGACATTTTATCGAAATTCGGCGACGTTTCTAATGATGTTTTGTTGTTTTGTGTAATTCGTTTTGTAATTGGATAGGGGCCTGGCTTGTTTACTGGATTCACGAAGCTATGCAAGGGCTTAGCTGTGGTGCTGGTTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGTTGTTAGTTATCTCGCTCTTATTCCAGCCAGGTATCTTGTTTGGAGAACTTAGTCTTTGGATTAGTGGTAGTGATAACCGTGCAAAGCTGATGCGTTCGTTCTTGCAGTAATGCCTGTAGGTTACGGGTTAGAAATGTCTTTGTTTTCTCGAGTCGAAATTTAGTCAGGAAAAAATCAAGAATCTTGTGATCACAGATGAAAATTTATTGAATTCTTGTATCTGCTAGGATTTCAGGTGGGCAGGTATATGTTACATGTTTTGAAATGATCATAGTGATCCAGAGGCTTGTCTTGTGTCCTGTGGGATTGATGGAAGTTAGTCAATAGTTTAGTTTCCATCCATGGAAATTTGGTCGTAATTGTAAAATGCAATGACTCTGTTGATTCCTCTATTCAATTTATTGGCCATAACATCCAAGTAGCGGTTTACCCTTCTTCAGATAAAACGTTTATGTTGATAAGAAGTTGCAACAAACTTTTTGAGAGGCTACTGTTGTGGATTATTGAAAGAAGTAGTCCAACGCTGGCTAATTAGGAGGAAGATCATGGGTTTATAAGTAAGGAACACTATCTCCATTGATATGAGGCCTTTTGGAGAAACTAAAAGAAAAGTCATGAGAGCTTATGCTCAAAGTGAACAATATCATATCATTGTAGAGAGTCGTGGTTCCCAACAGCTACATGATCTACTGCTTTAGGATTCCAAGGGTTATGTTCCAGAGGCCTAAGTTTACTGCTTTGATGTCTAGAACTCTTTCATTTTTTTAATCTGATGTTTTCACTGCTACACAATCTGAATTATTAACACGAGTGTGAAATGTGAATCCCTTATTATTCTGAATTGGCTTTAGTTATTTAACTACAATATTTTAGTTTCCTGATAGGAAGAAAGATTATTAATAAGAGTAGAAATGTAGAGAATGATATCCTCTGCACTAGAGTATATCATTTTATATATAAATGATCCGAGTAAAAGTATGCAAAAATGATCCCACAGTCTAAATGTTTACACTCCTGGGCCTGCAAGAGGTAAAATATAAACATCTTTTTCAGAAAACTTCTCCATCTGAGTATTTTTGTTAGCAAGTCTTCCGTTCTAACTCGACTACTCAATGAAGAGCTGAAACTGCAATATGACCTCAATCTTTTACTAGCCATCTTCTGATAACCCATAATTTACTACAAAAATCAAAATGGAGAAATATATCATTTACCAAAGAGGTGAAGGGCCATTAATTTAGGGAAAACAAGGATGACTGATGCAATGGTATTATAGATATGAAAGCTCGATCAACTGCAAATCATGAGTCATTGTCATTCTATTGGATCATCTATTCATCAAAATACCAAAATTGTCATTATCTTTCAGTATTCTATCGATGTTTTTCACTGCTTATATATAGAATTATCAAGCTAAGACCATATTGAATCTCTCACTCTCAACTACAACAATAAAACTATTGATCAAAATGTAGAAATTTGTGCCCAGTTTAATTCATTATTTTATTTTATTTGTGTGATGTGGGAATATTTCCTCTGTAGTGTAGGAATCGATTAAATTCAGGGAAGGCAGGTATCTGACCGAGTTTTGAGTAGTTAAATTTACATGGAAAATGTGTAAACAATAAATGGTTGGGTCATTCATTCCTTTGAACTTCTATTTTGTAGGACTATTCCTTTTGCTTGGAATCTCATAACTGCTGGTTATGTTGAACAGACAGTATATGGGGTATGCACTCACGTTGTCATACACTATTTTGTTTCCCTTTACAGAATCATAATTTGAACATATCTCACTATTTTTTGTTCAATCTTCACTGGAAGTTAGACTCACTGAGAGCCATATATTGCAGGTTATTGTCAGCACAGTTGGTCTCCTTTTTGTTGGGAAGCTGCTTGAACCCATCTGGGGCTCTAGAGAATTTTTGAAATTCATCTTTGTAGTCAATTTTATAACTTCTTTATGTGTCTTTATCACAGCAATTGCCCTATACTATATTACACAGGAGGAAAGTTATCTGTAAGTGCTACCGAGTCCTCGTGCATCAAAGGCTCTTTTTAGGCATACTCGTGTACATGTCTTTAGCTGATAGCGCATTATGGATTTTCATTTAAGCCATTTTTTGTCCGATTCATTCCATATAAGTATTTTACAGTCTCCCTTTATCAACTCCTCTTTAAACATGTTTCATTTTACGCCTCTCGGTCTTTCCATACATCTTGTTTACATATTTTTTTTCGGTCTCAGTTATCTGCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAACAAATCATACCTGATCAAGAGTTGCCATTATTGAAACTGAGAACTAAGGTATGAAAAATGTAGATAGCCATTTCCAAATTTTGAATGGTTTTTATCAGAGTTTTTCTTGAACGCTCTTTTGGGCTTTGCTTGAAACTTCATGCAGTGGTTGCCATCTCTTGCTGTATTAGTATCCATTGCTGTAAGCTGTTGGACAACAGGGGCAGCAACGTATCTTCCAACAATAATATTTGGAACATACATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAACAAAACTGAAAGGCGATCCTAGTGATGATTTTGCATTCTCTTCATTCTTCCCTGAACTCCTACGGTATTCTGTTTATCTAGAAGTTCCTTTTTCTACCTTTTAAGCTTCTCTTGCCGATGTTTTCAGGAATATTCTGTGTTCTTTCTCTCCATAGTCCATAGCGTACTATGACTCTTGATGTTCCTGTGCAGGCCAGTCATTGATCCAGTTGCATCAATATTTCATCGTCTGCTTTGTGGAAGATCTGAATCCTCTAACGATTCCGAGGACTATACTGCTGCAGGTGCCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTCGACGGAGGTAATATTTGCTAATATTTTTCTTCTGACTCATAAGGTTAAGTGTAAAGAATAGTAAAGATTGAAAATTCTACTGGTTGCAGAGAAAGGGGAGCAAGAGCTTTGGAAGAAAGACTGGCAGCTGAGAGATTGGCTGCAGCCAGAAGTGGTCAAGAGTCGGGAAGAGATGCAACAGAGAATGTTTGATAATATAATCCTATATAAGTTGGCGTTCATCTGATGATCAACTACTTGGGGGGGACTGTGCAGTATATCAAGAGGTCCTCTTTTCTTTATTCTGTTATGCAATTTTGCTTTGCACATTCCTTCTGAGTTGCAAAAATGTTGCTTCATTTATGCCCTTTGCAGCATTATTGTGGATTTATTTGTATACAGCCCAAGATATATAGAGTACAATTTCCTCCCAAGTTTCTCCCACTTTTATTTATCTATTTATTAGGACTAAAATACATTTTTTATCGTTGAAAAGTTTCTATTTCGCCTTAAA

mRNA sequence

ATGGTCAAAGAAACTGTAATCAGAAGTATTCATGATCTGGATTATCCGCACGGGGTGCACCATAATACTGTACGCCTCACCGCACCCAATACCCAACTCTTCCACGTTACGATCTTCGAAGCTCGAGCCAAGACCCACCTCCTCTGTAACCCAAAAGTCTCCCGCGAAGCAAAACAGTCCATTTTTAGCACACAACTCCGATCACCGTCGTCCACGGTCTATTTCAACGGTCACTATCCACCGTCTCTGCATATGAGTACTCCAGCAGTACCGGGGGGGCCTGGCTTGTTTACTGGATTCACGAAGCTATGCAAGGGCTTAGCTGTGGTGCTGGTTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGTTGTTAGTTATCTCGCTCTTATTCCAGCCAGGACTATTCCTTTTGCTTGGAATCTCATAACTGCTGGTTATGTTGAACAGACAGTATATGGGGTTATTGTCAGCACAGTTGGTCTCCTTTTTGTTGGGAAGCTGCTTGAACCCATCTGGGGCTCTAGAGAATTTTTGAAATTCATCTTTGTAGTCAATTTTATAACTTCTTTATGTGTCTTTATCACAGCAATTGCCCTATACTATATTACACAGGAGGAAAGTTATCTTTATCTGCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAACAAATCATACCTGATCAAGAGTTGCCATTATTGAAACTGAGAACTAAGTGGTTGCCATCTCTTGCTGTATTAGTATCCATTGCTGTAAGCTGTTGGACAACAGGGGCAGCAACGTATCTTCCAACAATAATATTTGGAACATACATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAACAAAACTGAAAGGCGATCCTAGTGATGATTTTGCATTCTCTTCATTCTTCCCTGAACTCCTACGGCCAGTCATTGATCCAGTTGCATCAATATTTCATCGTCTGCTTTGTGGAAGATCTGAATCCTCTAACGATTCCGAGGACTATACTGCTGCAGGTGCCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTCGACGGAGAGAAAGGGGAGCAAGAGCTTTGGAAGAAAGACTGGCAGCTGAGAGATTGGCTGCAGCCAGAAGTGGTCAAGAGTCGGGAAGAGATGCAACAGAGAATGTTTGATAATATAATCCTATATAAGTTGGCGTTCATCTGATGATCAACTACTTGGGGGGGACTGTGCAGTATATCAAGAGGTCCTCTTTTCTTTATTCTGTTATGCAATTTTGCTTTGCACATTCCTTCTGAGTTGCAAAAATGTTGCTTCATTTATGCCCTTTGCAGCATTATTGTGGATTTATTTGTATACAGCCCAAGATATATAGAGTACAATTTCCTCCCAAGTTTCTCCCACTTTTATTTATCTATTTATTAGGACTAAAATACATTTTTTATCGTTGAAAAGTTTCTATTTCGCCTTAAA

Coding sequence (CDS)

ATGGTCAAAGAAACTGTAATCAGAAGTATTCATGATCTGGATTATCCGCACGGGGTGCACCATAATACTGTACGCCTCACCGCACCCAATACCCAACTCTTCCACGTTACGATCTTCGAAGCTCGAGCCAAGACCCACCTCCTCTGTAACCCAAAAGTCTCCCGCGAAGCAAAACAGTCCATTTTTAGCACACAACTCCGATCACCGTCGTCCACGGTCTATTTCAACGGTCACTATCCACCGTCTCTGCATATGAGTACTCCAGCAGTACCGGGGGGGCCTGGCTTGTTTACTGGATTCACGAAGCTATGCAAGGGCTTAGCTGTGGTGCTGGTTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGTTGTTAGTTATCTCGCTCTTATTCCAGCCAGGACTATTCCTTTTGCTTGGAATCTCATAACTGCTGGTTATGTTGAACAGACAGTATATGGGGTTATTGTCAGCACAGTTGGTCTCCTTTTTGTTGGGAAGCTGCTTGAACCCATCTGGGGCTCTAGAGAATTTTTGAAATTCATCTTTGTAGTCAATTTTATAACTTCTTTATGTGTCTTTATCACAGCAATTGCCCTATACTATATTACACAGGAGGAAAGTTATCTTTATCTGCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAACAAATCATACCTGATCAAGAGTTGCCATTATTGAAACTGAGAACTAAGTGGTTGCCATCTCTTGCTGTATTAGTATCCATTGCTGTAAGCTGTTGGACAACAGGGGCAGCAACGTATCTTCCAACAATAATATTTGGAACATACATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAACAAAACTGAAAGGCGATCCTAGTGATGATTTTGCATTCTCTTCATTCTTCCCTGAACTCCTACGGCCAGTCATTGATCCAGTTGCATCAATATTTCATCGTCTGCTTTGTGGAAGATCTGAATCCTCTAACGATTCCGAGGACTATACTGCTGCAGGTGCCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTCGACGGAGAGAAAGGGGAGCAAGAGCTTTGGAAGAAAGACTGGCAGCTGAGAGATTGGCTGCAGCCAGAAGTGGTCAAGAGTCGGGAAGAGATGCAACAGAGAATGTTTGA

Protein sequence

MVKETVIRSIHDLDYPHGVHHNTVRLTAPNTQLFHVTIFEARAKTHLLCNPKVSREAKQSIFSTQLRSPSSTVYFNGHYPPSLHMSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLITAGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTGAATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFHRLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQESGRDATENV

Homology

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BLAST of CmoCh04G027060 vs. ExPASy Swiss-Prot
Match: Q8LF05 (Rhomboid-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=RBL19 PE=2 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 5.4e-119
Identity = 215/308 (69.81%), Postives = 257/308 (83.44%), Query Frame = 0


Query: 85  MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 144
           MS+P    G  +FT FTKLCKGLA+VLV GH++VQ  PA V YLALIPARTIPFAWNLIT
Sbjct: 1   MSSP----GTSMFTNFTKLCKGLALVLVVGHLVVQFIPATVPYLALIPARTIPFAWNLIT 60

Query: 145 AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 204
           +GY E +VYGV+ STV LLF+GK LEP+WGS EFLKFIFVVNF+T LCVF+TAIALYYIT
Sbjct: 61  SGYFELSVYGVVFSTVSLLFMGKFLEPVWGSTEFLKFIFVVNFLTYLCVFVTAIALYYIT 120

Query: 205 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 264
           + E YLY+P +GF+G+LAG LVGIKQIIPDQE+ LLK++ KWLPS+ +++SIA S +T  
Sbjct: 121 RLEVYLYMPFAGFHGVLAGLLVGIKQIIPDQEILLLKIKAKWLPSIMLILSIASSFFTLD 180

Query: 265 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 324
           +A YLPT+IFGTY+ W+YLRY QR+PETKL+GDPSDDFAFS+FFPELLRPVIDP+A IFH
Sbjct: 181 SAAYLPTLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPELLRPVIDPIALIFH 240

Query: 325 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 384
           R+LCGRS ++++  DY+ +GAPLPGSD  EASRRRERGARALEERL  ERL  AR+  E 
Sbjct: 241 RMLCGRSNATSEDHDYSTSGAPLPGSDSAEASRRRERGARALEERLGTERLVPARNKDEL 300

Query: 385 GRDATENV 393
             D  +NV
Sbjct: 301 QSDGLDNV 304

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BLAST of CmoCh04G027060 vs. ExPASy Swiss-Prot
Match: Q9WUH1 (Transmembrane protein 115 OS=Mus musculus OX=10090 GN=Tmem115 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 7.5e-28
Identity = 93/286 (32.52%), Postives = 149/286 (52.10%), Query Frame = 0


Query: 107 LAVVLVGGHILVQVFPAVVSY------------LALIPARTIP---FAWNLITAGYVEQT 166
           L  +L    ++V+   AVV +            LA+ P    P   + W L T G +EQ 
Sbjct: 12  LGAILASASVVVKALCAVVLFLYLLSFAVDTGCLAVTPGYLFPPNFWIWTLATHGLMEQH 71

Query: 167 VYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYITQEESYLY 226
           V+ V +S   ++  G+LLEP+WG+ E L F  VVN    L   +  +  Y  +    YL+
Sbjct: 72  VWDVAISLATVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGALAYLLTYMASFNLVYLF 131

Query: 227 -LPVSGFYGILAGFLVGIKQIIPD-QELPLLKLRTKWLPSLAVLVSIAVSCWTTGAATYL 286
            + + G  G L G LV +KQ + D   L + ++R   +P L + + + +   T   +  L
Sbjct: 132 TIRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVVPMLLLALLLLLRLATLLQSPAL 191

Query: 287 PTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFHRLL-- 346
            +  FG   SW+YLR++QR   ++ +GD +D FAF++FFPE+L+PV+  +A++ H LL  
Sbjct: 192 ASYGFGLLSSWVYLRFYQR--HSRGRGDMADHFAFATFFPEILQPVVGLLANLVHGLLVK 251

Query: 347 ---CGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERL 371
              C ++    D    ++    LPG+DP +A RRR+   +AL ERL
Sbjct: 252 VKICQKTVKRYDVGAPSSITISLPGTDPQDAERRRQLALKALNERL 295

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BLAST of CmoCh04G027060 vs. ExPASy Swiss-Prot
Match: Q12893 (Transmembrane protein 115 OS=Homo sapiens OX=9606 GN=TMEM115 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.8e-27
Identity = 92/286 (32.17%), Postives = 147/286 (51.40%), Query Frame = 0


Query: 107 LAVVLVGGHILVQVFPAVVSY------------LALIPARTIP---FAWNLITAGYVEQT 166
           L  +L    ++V+   A V +            LA+ P    P   + W L T G +EQ 
Sbjct: 12  LGAILASASVVVKALCAAVLFLYLLSFAVDTGCLAVTPGYLFPPNFWIWTLATHGLMEQH 71

Query: 167 VYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYITQEESYLY 226
           V+ V +S   ++  G+LLEP+WG+ E L F  VVN    L      +  Y  +    YL+
Sbjct: 72  VWDVAISLTTVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFNLVYLF 131

Query: 227 -LPVSGFYGILAGFLVGIKQIIPD-QELPLLKLRTKWLPSLAVLVSIAVSCWTTGAATYL 286
            + + G  G L G LV +KQ + D   L + ++R   +P L + + + +   T   +  L
Sbjct: 132 TVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVMPMLLLALLLLLRLATLLQSPAL 191

Query: 287 PTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFHRLL-- 346
            +  FG   SW+YLR++QR   ++ +GD +D FAF++FFPE+L+PV+  +A++ H LL  
Sbjct: 192 ASYGFGLLSSWVYLRFYQR--HSRGRGDMADHFAFATFFPEILQPVVGLLANLVHSLLVK 251

Query: 347 ---CGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERL 371
              C ++    D    ++    LPG+DP +A RRR+   +AL ERL
Sbjct: 252 VKICQKTVKRYDVGAPSSITISLPGTDPQDAERRRQLALKALNERL 295

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BLAST of CmoCh04G027060 vs. ExPASy Swiss-Prot
Match: A4FUB8 (Transmembrane protein 115 OS=Bos taurus OX=9913 GN=TMEM115 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.7e-27
Identity = 87/253 (34.39%), Postives = 137/253 (54.15%), Query Frame = 0


Query: 128 LALIPARTIP---FAWNLITAGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFV 187
           LA+ P    P   + W L T G +EQ V+ V +S   ++  G+LLEP+WG+ E L F  V
Sbjct: 45  LAVTPGYLFPPNFWIWTLATHGLMEQHVWDVAISLATVVVAGRLLEPLWGALELLIFFSV 104

Query: 188 VNFITSLCVFITAIALYYITQEESYLY-LPVSGFYGILAGFLVGIKQIIPD-QELPLLKL 247
           VN    L      +  Y  +    YL+ + + G  G L G LV +KQ + D   L + ++
Sbjct: 105 VNVSVGLLGAFAYLLTYMASFNLVYLFTVRIHGALGFLGGVLVALKQTMGDCVVLRVPQV 164

Query: 248 RTKWLPSLAVLVSIAVSCWTTGAATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDF 307
           R   +P L + + + +   T   +  L +  FG   SW+YLR++QR   ++ +GD +D F
Sbjct: 165 RVSVVPMLLLGLLLLLRLATLLQSPALASYGFGLISSWVYLRFYQR--HSRGRGDMADHF 224

Query: 308 AFSSFFPELLRPVIDPVASIFHRLL-----CGRSESSNDSEDYTAAGAPLPGSDPIEASR 367
           AF++FFPE+L+PV+  +A++ H LL     C ++    D    ++    LPG+DP +A R
Sbjct: 225 AFATFFPEILQPVVGLLANLVHGLLVKVKICQKTVKRYDVGAPSSITISLPGTDPQDAER 284

Query: 368 RRERGARALEERL 371
           RR+   +AL ERL
Sbjct: 285 RRQLALKALNERL 295

[Close]

BLAST of CmoCh04G027060 vs. ExPASy Swiss-Prot
Match: Q12239 (Transmembrane protein 115 homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YOL107W PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-11
Identity = 64/273 (23.44%), Postives = 123/273 (45.05%), Query Frame = 0


Query: 128 LALIPARTIPFAWNLITAGYVEQTVYGVIVSTVGLLFVGKLLEPIW-GSREFLKFIFVVN 187
           L ++P++   +  +L+ + +++   + V+V+ + L+  G  +E  W  S+E  KFI V+ 
Sbjct: 68  LQMVPSQIWRYPTSLVLSNFIDTKAWKVVVNLLNLIIGGSFIERNWNSSKEMFKFIIVLG 127

Query: 188 FITSLCVFITAIALYYITQEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLK----- 247
            +T++ + +  + + + + +   L +P+ G Y IL GF +  +Q++P+  +  LK     
Sbjct: 128 SLTNVLIIMLTLLVSFFSNKVR-LDIPLDGNYTILIGFPIIYRQLLPETTIIHLKTPQFL 187

Query: 248 ---LRTKWLPSLAVLVSIAVSCWTTGAATYLPTIIFGTYISWIYLRYWQR--------KP 307
               R K LP   +                L +I    + SW YLR++Q+         P
Sbjct: 188 AKNFRFKLLPIFVMFTMTVTQIIWFHHFAQLFSIWVTFFASWSYLRFFQKLAPLNCPSLP 247

Query: 308 ETK-------LKGDPSDDFAFSSFFPELLRPVIDPVASIFHRLLCGRSESSNDSEDY--- 367
            T        L GD SD F    FFP+L++P++ P+ +  + ++  + +      D    
Sbjct: 248 TTNSQGGQEILVGDASDTFQLIYFFPDLIKPILRPIFNFIYNVVVVKFKVIKPFHDIDID 307

Query: 368 ---TAAGAPLPGSDPIEASRRRERGARALEERL 371
              T A +           RRR+   + LEER+
Sbjct: 308 IGNTIAESRGAKKIMTVEERRRQLALQVLEERM 339

[Close]

BLAST of CmoCh04G027060 vs. ExPASy TrEMBL
Match: A0A6J1HJV9 (rhomboid-like protein 19 OS=Cucurbita moschata OX=3662 GN=LOC111464773 PE=4 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 2.5e-167
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 85  MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 144
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 145 AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 204
           AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 205 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 264
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180

Query: 265 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 324
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240

Query: 325 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 384
           RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES
Sbjct: 241 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300

Query: 385 GRDATENV 393
           GRDATENV
Sbjct: 301 GRDATENV 308

[Close]

BLAST of CmoCh04G027060 vs. ExPASy TrEMBL
Match: A0A6J1JMW3 (rhomboid-like protein 19 OS=Cucurbita maxima OX=3661 GN=LOC111487282 PE=4 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 4.4e-164
Identity = 302/308 (98.05%), Postives = 304/308 (98.70%), Query Frame = 0


Query: 85  MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 144
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 145 AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 204
           AGYVEQTVYGV+VSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 205 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 264
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAV VSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVFVSIAVSCWTTG 180

Query: 265 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 324
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240

Query: 325 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 384
           RL+CGRSES NDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARS QES
Sbjct: 241 RLICGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSDQES 300

Query: 385 GRDATENV 393
            RDATENV
Sbjct: 301 VRDATENV 308

[Close]

BLAST of CmoCh04G027060 vs. ExPASy TrEMBL
Match: A0A6J1C1K7 (rhomboid-like protein 19 OS=Momordica charantia OX=3673 GN=LOC111006580 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 4.4e-156
Identity = 283/308 (91.88%), Postives = 297/308 (96.43%), Query Frame = 0


Query: 85  MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 144
           MSTPAVPGG GLFTGFTKLCKGLAVVLVGGHILVQ FPAVV+YLALIP RTIPFAWNL+T
Sbjct: 1   MSTPAVPGGSGLFTGFTKLCKGLAVVLVGGHILVQFFPAVVNYLALIPTRTIPFAWNLLT 60

Query: 145 AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 204
           AGYVEQ+VYGV+ ST+GLLFVGKLLEPIWGSREFLKFIFVVNF+TSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVYGVVASTIGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 205 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 264
           QEESYLY+P+SGFYGILAGFLVGIKQIIPDQELPLLKLR KWLPSLA+LVSIAVS WT G
Sbjct: 121 QEESYLYMPISGFYGILAGFLVGIKQIIPDQELPLLKLRAKWLPSLALLVSIAVSFWTVG 180

Query: 265 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 324
           AATYLPTIIFGTYISWIYLRYWQRKPE KLKGDPSDDFAFS+FFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASIFH 240

Query: 325 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 384
           RLLCGRSESSN+++DYT  GAPLPGSDPIEASRRRERGARALEERLAAERLAAARS QES
Sbjct: 241 RLLCGRSESSNNADDYTVGGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 385 GRDATENV 393
           GRDAT+NV
Sbjct: 301 GRDATDNV 308

[Close]

BLAST of CmoCh04G027060 vs. ExPASy TrEMBL
Match: A0A5D3C5G3 (Rhomboid-like protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00860 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 7.5e-156
Identity = 280/308 (90.91%), Postives = 301/308 (97.73%), Query Frame = 0


Query: 85  MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 144
           MSTPAVPGG G FTGFTKLCKGLAVVL+GGHILVQ+FPAVV+YLALIPARTIPFAWNL+T
Sbjct: 1   MSTPAVPGGSGSFTGFTKLCKGLAVVLIGGHILVQLFPAVVNYLALIPARTIPFAWNLLT 60

Query: 145 AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 204
           AGY+EQ++YGV+VSTVGLLFVGKLLEPIWGSREFLKFIFVVNF+TSLCVFITAIALYYIT
Sbjct: 61  AGYIEQSIYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 205 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 264
           QEESYLYLPVSGFYGILAGFLVGIKQ+IPDQELP+LKL+ KWLPS+AVLVSIA+S WTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPVLKLKAKWLPSVAVLVSIAISFWTTG 180

Query: 265 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 324
           AATYLPTIIFGTYISWIYLRYWQRKPE KLKGDPSDDFAFS+FFPELLRPVIDP+ASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIASIFH 240

Query: 325 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 384
           R+LCGRSES +++EDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARS QES
Sbjct: 241 RMLCGRSESRDNAEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 385 GRDATENV 393
           G+DATENV
Sbjct: 301 GKDATENV 308

[Close]

BLAST of CmoCh04G027060 vs. ExPASy TrEMBL
Match: A0A1S3CPF3 (rhomboid-like protein 19 OS=Cucumis melo OX=3656 GN=LOC103503313 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 7.5e-156
Identity = 280/308 (90.91%), Postives = 301/308 (97.73%), Query Frame = 0


Query: 85  MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 144
           MSTPAVPGG G FTGFTKLCKGLAVVL+GGHILVQ+FPAVV+YLALIPARTIPFAWNL+T
Sbjct: 1   MSTPAVPGGSGSFTGFTKLCKGLAVVLIGGHILVQLFPAVVNYLALIPARTIPFAWNLLT 60

Query: 145 AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 204
           AGY+EQ++YGV+VSTVGLLFVGKLLEPIWGSREFLKFIFVVNF+TSLCVFITAIALYYIT
Sbjct: 61  AGYIEQSIYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 205 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 264
           QEESYLYLPVSGFYGILAGFLVGIKQ+IPDQELP+LKL+ KWLPS+AVLVSIA+S WTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPVLKLKAKWLPSVAVLVSIAISFWTTG 180

Query: 265 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 324
           AATYLPTIIFGTYISWIYLRYWQRKPE KLKGDPSDDFAFS+FFPELLRPVIDP+ASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIASIFH 240

Query: 325 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 384
           R+LCGRSES +++EDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARS QES
Sbjct: 241 RMLCGRSESRDNAEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 385 GRDATENV 393
           G+DATENV
Sbjct: 301 GKDATENV 308

[Close]

BLAST of CmoCh04G027060 vs. NCBI nr
Match: XP_022964776.1 (rhomboid-like protein 19 [Cucurbita moschata])

HSP 1 Score: 598.2 bits (1541), Expect = 5.1e-167
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 85  MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 144
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 145 AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 204
           AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 205 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 264
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180

Query: 265 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 324
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240

Query: 325 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 384
           RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES
Sbjct: 241 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300

Query: 385 GRDATENV 393
           GRDATENV
Sbjct: 301 GRDATENV 308

[Close]

BLAST of CmoCh04G027060 vs. NCBI nr
Match: XP_023552913.1 (rhomboid-like protein 19 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 597.0 bits (1538), Expect = 1.1e-166
Identity = 307/308 (99.68%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 85  MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 144
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 145 AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 204
           AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 205 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 264
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180

Query: 265 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 324
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPV+SIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVSSIFH 240

Query: 325 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 384
           RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES
Sbjct: 241 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300

Query: 385 GRDATENV 393
           GRDATENV
Sbjct: 301 GRDATENV 308

[Close]

BLAST of CmoCh04G027060 vs. NCBI nr
Match: KAG6602322.1 (Rhomboid-like protein 19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 596.3 bits (1536), Expect = 1.9e-166
Identity = 307/308 (99.68%), Postives = 307/308 (99.68%), Query Frame = 0


Query: 85  MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 144
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 145 AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 204
           AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 205 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 264
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180

Query: 265 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 324
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240

Query: 325 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 384
           RLLCGRSES NDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES
Sbjct: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300

Query: 385 GRDATENV 393
           GRDATENV
Sbjct: 301 GRDATENV 308

[Close]

BLAST of CmoCh04G027060 vs. NCBI nr
Match: KAG7033005.1 (Rhomboid-like protein 19 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 594.7 bits (1532), Expect = 5.7e-166
Identity = 306/308 (99.35%), Postives = 306/308 (99.35%), Query Frame = 0


Query: 85  MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 144
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 145 AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 204
           AGYVEQTVYG IVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGAIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 205 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 264
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 180

Query: 265 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 324
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240

Query: 325 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 384
           RLLCGRSES NDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES
Sbjct: 241 RLLCGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 300

Query: 385 GRDATENV 393
           GRDATENV
Sbjct: 301 GRDATENV 308

[Close]

BLAST of CmoCh04G027060 vs. NCBI nr
Match: XP_022990416.1 (rhomboid-like protein 19 [Cucurbita maxima])

HSP 1 Score: 587.4 bits (1513), Expect = 9.0e-164
Identity = 302/308 (98.05%), Postives = 304/308 (98.70%), Query Frame = 0


Query: 85  MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 144
           MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT
Sbjct: 1   MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 60

Query: 145 AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 204
           AGYVEQTVYGV+VSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT
Sbjct: 61  AGYVEQTVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 120

Query: 205 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 264
           QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAV VSIAVSCWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVFVSIAVSCWTTG 180

Query: 265 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 324
           AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 240

Query: 325 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 384
           RL+CGRSES NDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARS QES
Sbjct: 241 RLICGRSESPNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSDQES 300

Query: 385 GRDATENV 393
            RDATENV
Sbjct: 301 VRDATENV 308

[Close]

BLAST of CmoCh04G027060 vs. TAIR 10
Match: AT3G07950.1 (rhomboid protein-related )

HSP 1 Score: 429.1 bits (1102), Expect = 3.8e-120
Identity = 215/308 (69.81%), Postives = 257/308 (83.44%), Query Frame = 0


Query: 85  MSTPAVPGGPGLFTGFTKLCKGLAVVLVGGHILVQVFPAVVSYLALIPARTIPFAWNLIT 144
           MS+P    G  +FT FTKLCKGLA+VLV GH++VQ  PA V YLALIPARTIPFAWNLIT
Sbjct: 1   MSSP----GTSMFTNFTKLCKGLALVLVVGHLVVQFIPATVPYLALIPARTIPFAWNLIT 60

Query: 145 AGYVEQTVYGVIVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFITSLCVFITAIALYYIT 204
           +GY E +VYGV+ STV LLF+GK LEP+WGS EFLKFIFVVNF+T LCVF+TAIALYYIT
Sbjct: 61  SGYFELSVYGVVFSTVSLLFMGKFLEPVWGSTEFLKFIFVVNFLTYLCVFVTAIALYYIT 120

Query: 205 QEESYLYLPVSGFYGILAGFLVGIKQIIPDQELPLLKLRTKWLPSLAVLVSIAVSCWTTG 264
           + E YLY+P +GF+G+LAG LVGIKQIIPDQE+ LLK++ KWLPS+ +++SIA S +T  
Sbjct: 121 RLEVYLYMPFAGFHGVLAGLLVGIKQIIPDQEILLLKIKAKWLPSIMLILSIASSFFTLD 180

Query: 265 AATYLPTIIFGTYISWIYLRYWQRKPETKLKGDPSDDFAFSSFFPELLRPVIDPVASIFH 324
           +A YLPT+IFGTY+ W+YLRY QR+PETKL+GDPSDDFAFS+FFPELLRPVIDP+A IFH
Sbjct: 181 SAAYLPTLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPELLRPVIDPIALIFH 240

Query: 325 RLLCGRSESSNDSEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSGQES 384
           R+LCGRS ++++  DY+ +GAPLPGSD  EASRRRERGARALEERL  ERL  AR+  E 
Sbjct: 241 RMLCGRSNATSEDHDYSTSGAPLPGSDSAEASRRRERGARALEERLGTERLVPARNKDEL 300

Query: 385 GRDATENV 393
             D  +NV
Sbjct: 301 QSDGLDNV 304

The following BLAST results are available for this feature:

BLAST of CmoCh04G027060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LF05	5.4e-119	69.81	Rhomboid-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=RBL19 PE=2 SV=1	[more]
Q9WUH1	7.5e-28	32.52	Transmembrane protein 115 OS=Mus musculus OX=10090 GN=Tmem115 PE=1 SV=1	[more]
Q12893	2.8e-27	32.17	Transmembrane protein 115 OS=Homo sapiens OX=9606 GN=TMEM115 PE=1 SV=1	[more]
A4FUB8	3.7e-27	34.39	Transmembrane protein 115 OS=Bos taurus OX=9913 GN=TMEM115 PE=2 SV=1	[more]
Q12239	1.3e-11	23.44	Transmembrane protein 115 homolog OS=Saccharomyces cerevisiae (strain ATCC 20450...	[more]

BLAST of CmoCh04G027060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJV9	2.5e-167	100.00	rhomboid-like protein 19 OS=Cucurbita moschata OX=3662 GN=LOC111464773 PE=4 SV=1	[more]
A0A6J1JMW3	4.4e-164	98.05	rhomboid-like protein 19 OS=Cucurbita maxima OX=3661 GN=LOC111487282 PE=4 SV=1	[more]
A0A6J1C1K7	4.4e-156	91.88	rhomboid-like protein 19 OS=Momordica charantia OX=3673 GN=LOC111006580 PE=4 SV=...	[more]
A0A5D3C5G3	7.5e-156	90.91	Rhomboid-like protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CPF3	7.5e-156	90.91	rhomboid-like protein 19 OS=Cucumis melo OX=3656 GN=LOC103503313 PE=4 SV=1	[more]

BLAST of CmoCh04G027060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964776.1	5.1e-167	100.00	rhomboid-like protein 19 [Cucurbita moschata]	[more]
XP_023552913.1	1.1e-166	99.68	rhomboid-like protein 19 [Cucurbita pepo subsp. pepo]	[more]
KAG6602322.1	1.9e-166	99.68	Rhomboid-like protein 19, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7033005.1	5.7e-166	99.35	Rhomboid-like protein 19 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022990416.1	9.0e-164	98.05	rhomboid-like protein 19 [Cucurbita maxima]	[more]

BLAST of CmoCh04G027060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07950.1	3.8e-120	69.81	rhomboid protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01160	DUF1751_2	coord: 132..230 e-value: 6.6E-47 score: 171.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 332..361
None	No IPR available	PANTHER	PTHR13377:SF9	RHOMBOID-LIKE PROTEIN 19	coord: 93..392
IPR013861	TMEM115/Pdh1/Rbl19	PFAM	PF08551	DUF1751	coord: 132..230 e-value: 1.8E-33 score: 115.1
IPR013861	TMEM115/Pdh1/Rbl19	PANTHER	PTHR13377	PLACENTAL PROTEIN 6	coord: 93..392
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 100..294 e-value: 4.0E-6 score: 28.6
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 103..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G027060.1	CmoCh04G027060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane