CmoCh04G026900 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G026900
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionprotein ENHANCED DISEASE RESISTANCE 2-like
LocationCmo_Chr04: 19581167 .. 19583597 (+)
RNA-Seq ExpressionCmoCh04G026900
SyntenyCmoCh04G026900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAATGGGAAGAAAAGAGGAACAAGGAGAGGGGTAGGTAGGGAGTTTAGAGAGCATTATCTGTTTTGTGTCTCTCTGTTAAGCTGGGGTTGGTTGGTGTGTACATAAAGAGAAATGGTTTTTCTCTGTATGAGAATTGGGTATAAGTGTTTGATTGTGCAATTCTTAGCTTCATCGTCACGAATACGAGCATTACGGATACAATTGGCATAATGGGTCGGGTTGGGTCGAGTCGATTTTTTCCACTCTGTTAGTCATAAAGAGAGATAGAGAAGAAAAAACAGGTCAGGTTGAGTCGGTTGTTCCCCTTTACTAGTCATAAGGAAAGATAGAGTAGAAAAACATGCCCGAATCGTTAGATCATTAATATTCTTACTTAGTGATTTGAATACGTGCATTAGAGATACCATCGATATAAATGGGTTGGAGAGGGGAACAAAACATTTTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATACGTTTTAAAATCGTGAGGTTGACGACGATATGTAATGGGTGGACAATATCTGCAAGCGGTAACCTTGGTTTGTTACAAATGGTATAAGAGTCAGACACCAGATAGTGTGTCAACAAGGACGTAGGACCTCTAAGGGGGTGGATTGCGAGATCACACATCGGTTGGAGATGGGAACAAAGCATTCGTTACAAGGGTGTGGAAACCTTTCCCTATCAGACGCATTTTAAAATCGTGAGGCTGACGATGATACATAACATACTAGAGTAGACAATATTTACTAGCAGTAGCTTGAGTTGTTACAGACCACCACTAAACCTAAAGTTTAAGGTGATTCGTCACTTATTAGTAACAAGTGATTAACAATAGCTTAAATTACAAGTTTGATTCCTTGATCCTTTGAGGGTCGTGTTAAATAGGCCTTTGAATTTTATAATATGTCTAACATCATTAAACCGTCAATTTTATGTTTACTAAACCTCGAAACTTCAAGGGTGTATAATCAGTCTCTAAGTGTCGATATTGGACACAATTTTGAATGTTTAATATCCCATTAGACACAAAATTGTTTTAAAATGTTTAATATGTAAAAAATTTATCAGACGTAAAATTGAAAACTCAATGATGTTTTTGATCTTTCAGAGTTTGTTTGGTCGGAGGTTTTATTTAAAATGTCTAATAATCAAATAGTTATGTCAACAAGATATAACAAATGTAATATATTTTTTTTATTAATATTCTTAACTTATTAAACCGAGTCGATTGAGTTGATTTTACACTTATACCCCTGGGTTTTAGTTTTCATGACAATCATTATTGTTTAAATGACTTGTTTTATTTGTTTTTGTTATTCCAGAAGTAGGGCATCTTTCTGGAAATGACATTACTACCCTCATTTGCATAAATAGTAAGTGAGAGATATTTTTTTTATAAATATTTTTCTTTATTTTGAATAGAGGAAGAGATTTTTTTAAGTAAAAGATTTTGTGGTTTGACTTTTAAAAAAAGTCAATTTTTTTTAAGGGCTGACATTCCAATATATTGGGAACCATACACTTGGTTTCCCTCACTCCCGACCATACCATTTTTGGATTAAAAAAAAACTCATATTTTCATTAATTTGTTTTTTCCTTTATAGTCTTAAATATTCTATTATAAAAAATCCACAAAAAATATTAATTATTAATTATTTGAATTAATTATATTAAAGTATAATTTATAAATCATATAAATTTAATTATTGGAAATTCTTAGTGGATAAGATATTTGATTATTAGGTATTAAAATCACAAATATATGTATATATATTAGAAGGGTAAAATAGTAATTTCGGATATGGTAATTGTTTTTCTTGTACGCCAAAATTCAGCGTGTTTAAAAACGAGAAAGAAAGAACAAACGAACATTAAGAACGAAGAGGAACGAATTCTGAACTCTGATTTTGCCGCCATTGATTCTCTGATTCCCTTCGTCGGAATCAGAGAGTCATTTCAATCCTCCGTTTCTTCAACGTCTCTTTTCTTCATAATCATACGCTACAAATCTCAATCACTACTCTCCATTTCTCTGTTTCAAGCCTTCTTTGGGGAATTTTTTGGTATTAAAATCGATCGCCATTCGCCATTTCAATGAAATTGCTCTAAAGATCATCTGTTCCTGAATCCGGGCGTTGGTTTACCTTCTGCAATGGGGGCCCCTAAAAATGACGGCAAAATGGAAGGTTGGTTGTATCTCATCCGGTCCAATCGGTTCGGGTTGCAGTACTCGAAGAAGAGATTCTTCGTTCTCCAGGATGACTGCCTCAAGAGCTTCAAATCCGTCCCTGTTTCTGAGGATGAGGTAAGAATTTATTTCACACGATTTAATTGGGAACTCGTTTGTGTGGTCTTGTTTTCTATCGCCCGTTCATGTTTCTTGGGGTCGAAATTTTTGCAGGATGGATGTGTTTAA

mRNA sequence

ATGAATAATGGGAAGAAAAGAGGAACAAGGAGAGGGGTAGGTAGGGAGTTTAGAGAGCATTATCTGTTTTGTGTCTCTCTGTTAAGCTGGGAAGTAGGGCATCTTTCTGGAAATGACATTACTACCCTCATTTGCATAAATAATCATCTGTTCCTGAATCCGGGCGTTGGTTTACCTTCTGCAATGGGGGCCCCTAAAAATGACGGCAAAATGGAAGGTTGGTTGTATCTCATCCGGTCCAATCGGTTCGGGTTGCAGTACTCGAAGAAGAGATTCTTCGTTCTCCAGGATGACTGCCTCAAGAGCTTCAAATCCGTCCCTGTTTCTGAGGATGAGGATGGATGTGTTTAA

Coding sequence (CDS)

ATGAATAATGGGAAGAAAAGAGGAACAAGGAGAGGGGTAGGTAGGGAGTTTAGAGAGCATTATCTGTTTTGTGTCTCTCTGTTAAGCTGGGAAGTAGGGCATCTTTCTGGAAATGACATTACTACCCTCATTTGCATAAATAATCATCTGTTCCTGAATCCGGGCGTTGGTTTACCTTCTGCAATGGGGGCCCCTAAAAATGACGGCAAAATGGAAGGTTGGTTGTATCTCATCCGGTCCAATCGGTTCGGGTTGCAGTACTCGAAGAAGAGATTCTTCGTTCTCCAGGATGACTGCCTCAAGAGCTTCAAATCCGTCCCTGTTTCTGAGGATGAGGATGGATGTGTTTAA

Protein sequence

MNNGKKRGTRRGVGREFREHYLFCVSLLSWEVGHLSGNDITTLICINNHLFLNPGVGLPSAMGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDEDGCV
Homology
[Close]
BLAST of CmoCh04G026900 vs. ExPASy TrEMBL
Match: A0A6J1H154 (protein ENHANCED DISEASE RESISTANCE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111459475 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.5e-21
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 62  MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDE+
Sbjct: 1   MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDEE 52

[Close]
BLAST of CmoCh04G026900 vs. ExPASy TrEMBL
Match: A0A6J1JPL8 (protein ENHANCED DISEASE RESISTANCE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111487189 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.7e-20
Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 62  MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQ+DCLKSFKSVPVS DE+
Sbjct: 1   MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQNDCLKSFKSVPVSGDEE 52

[Close]
BLAST of CmoCh04G026900 vs. ExPASy TrEMBL
Match: A0A6J1K1G5 (protein ENHANCED DISEASE RESISTANCE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489280 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.3e-19
Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 62  MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           MGA KNDGKMEGWLYLIRSNRFGLQYSKKR+FVLQDDCLKSFKSVPVSE+E+
Sbjct: 1   MGALKNDGKMEGWLYLIRSNRFGLQYSKKRYFVLQDDCLKSFKSVPVSENEE 52

[Close]
BLAST of CmoCh04G026900 vs. ExPASy TrEMBL
Match: A0A6J1FKV4 (protein ENHANCED DISEASE RESISTANCE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444916 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.3e-19
Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 62  MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           MGA KNDGKMEGWLYLIRSNRFGLQYSKKR+FVLQDDCLKSFKSVPVSE+E+
Sbjct: 1   MGALKNDGKMEGWLYLIRSNRFGLQYSKKRYFVLQDDCLKSFKSVPVSENEE 52

[Close]
BLAST of CmoCh04G026900 vs. ExPASy TrEMBL
Match: A0A5A7T327 (Protein ENHANCED DISEASE RESISTANCE 2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold147G00450 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 7.4e-19
Identity = 47/52 (90.38%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 62  MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           MGAP NDGKMEGWLYLIRSNRFGLQYS+KR+FVLQDDCLKSFKSVPVSE+E+
Sbjct: 1   MGAPINDGKMEGWLYLIRSNRFGLQYSQKRYFVLQDDCLKSFKSVPVSENEE 52

[Close]
BLAST of CmoCh04G026900 vs. NCBI nr
Match: XP_022958172.1 (protein ENHANCED DISEASE RESISTANCE 2-like [Cucurbita moschata])

HSP 1 Score: 110.9 bits (276), Expect = 7.3e-21
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 62  MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDE+
Sbjct: 1   MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDEE 52

[Close]
BLAST of CmoCh04G026900 vs. NCBI nr
Match: KAG7032991.1 (Protein ENHANCED DISEASE RESISTANCE 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 109.8 bits (273), Expect = 1.6e-20
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 62  MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           MGAPKNDGKM+GWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDE+
Sbjct: 1   MGAPKNDGKMDGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDEE 52

[Close]
BLAST of CmoCh04G026900 vs. NCBI nr
Match: KAG6602311.1 (Protein ENHANCED DISEASE RESISTANCE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 109.8 bits (273), Expect = 1.6e-20
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 62  MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           MGAPKNDGKM+GWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDE+
Sbjct: 1   MGAPKNDGKMDGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDEE 52

[Close]
BLAST of CmoCh04G026900 vs. NCBI nr
Match: XP_023553695.1 (protein ENHANCED DISEASE RESISTANCE 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-20
Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 62  MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           MG PKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDE+
Sbjct: 1   MGPPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDEE 52

[Close]
BLAST of CmoCh04G026900 vs. NCBI nr
Match: XP_022990255.1 (protein ENHANCED DISEASE RESISTANCE 2-like [Cucurbita maxima])

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-19
Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 62  MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQ+DCLKSFKSVPVS DE+
Sbjct: 1   MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQNDCLKSFKSVPVSGDEE 52

[Close]
BLAST of CmoCh04G026900 vs. TAIR 10
Match: AT3G54800.1 (Pleckstrin homology (PH) and lipid-binding START domains-containing protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 0 

Query: 62  MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           MG  + DG+MEGWLY IR NRFGLQ+S+KR+FVL ++ L SFKSVP   +E+
Sbjct: 1   MGVSQTDGRMEGWLYTIRHNRFGLQFSRKRYFVLHENNLTSFKSVPSDHNEE 52

[Close]
BLAST of CmoCh04G026900 vs. TAIR 10
Match: AT3G54800.2 (Pleckstrin homology (PH) and lipid-binding START domains-containing protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 0 

Query: 62  MGAPKNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           MG  + DG+MEGWLY IR NRFGLQ+S+KR+FVL ++ L SFKSVP   +E+
Sbjct: 1   MGVSQTDGRMEGWLYTIRHNRFGLQFSRKRYFVLHENNLTSFKSVPSDHNEE 52

[Close]
BLAST of CmoCh04G026900 vs. TAIR 10
Match: AT2G28320.1 (Pleckstrin homology (PH) and lipid-binding START domains-containing protein )

HSP 1 Score: 65.9 bits (159), Expect = 2.5e-11
Identity = 29/48 (60.42%), Postives = 40/48 (83.33%), Query Frame = 0 

Query: 66  KNDGKMEGWLYLIRSNRFGLQYSKKRFFVLQDDCLKSFKSVPVSEDED 114
           +++ KMEGWLY+IRSNRFGL +S+KR+FVL D  LKSFKS+  S+ ++
Sbjct: 8   ESETKMEGWLYIIRSNRFGLHFSRKRYFVLGDHLLKSFKSISDSKTKN 55

The following BLAST results are available for this feature:
BLAST of CmoCh04G026900 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh04G026900 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H1543.5e-2198.08protein ENHANCED DISEASE RESISTANCE 2-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1JPL88.7e-2094.23protein ENHANCED DISEASE RESISTANCE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1K1G54.3e-1992.31protein ENHANCED DISEASE RESISTANCE 2-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1FKV44.3e-1992.31protein ENHANCED DISEASE RESISTANCE 2-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A5A7T3277.4e-1990.38Protein ENHANCED DISEASE RESISTANCE 2-like isoform X1 OS=Cucumis melo var. makuw... [more]
BLAST of CmoCh04G026900 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022958172.17.3e-2198.08protein ENHANCED DISEASE RESISTANCE 2-like [Cucurbita moschata][more]
KAG7032991.11.6e-2096.15Protein ENHANCED DISEASE RESISTANCE 2 [Cucurbita argyrosperma subsp. argyrosperm... [more]
KAG6602311.11.6e-2096.15Protein ENHANCED DISEASE RESISTANCE 2, partial [Cucurbita argyrosperma subsp. so... [more]
XP_023553695.12.8e-2096.15protein ENHANCED DISEASE RESISTANCE 2-like [Cucurbita pepo subsp. pepo][more]
XP_022990255.11.8e-1994.23protein ENHANCED DISEASE RESISTANCE 2-like [Cucurbita maxima][more]
BLAST of CmoCh04G026900 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G54800.11.2e-1361.54Pleckstrin homology (PH) and lipid-binding START domains-containing protein [more]
AT3G54800.21.2e-1361.54Pleckstrin homology (PH) and lipid-binding START domains-containing protein [more]
AT2G28320.12.5e-1160.42Pleckstrin homology (PH) and lipid-binding START domains-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR045096Protein ENHANCED DISEASE RESISTANCE 2-likePANTHERPTHR12136ENHANCED DISEASE RESISTANCE-RELATEDcoord: 62..113
NoneNo IPR availablePANTHERPTHR12136:SF106PROTEIN ENHANCED DISEASE RESISTANCE 2-LIKEcoord: 62..113
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 62..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G026900.1CmoCh04G026900.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0008289 lipid binding