CmoCh04G026810 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G026810
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Small polypeptide DEVIL 11
Location	Cmo_Chr04: 19523082 .. 19523288 (-)
RNA-Seq Expression	CmoCh04G026810
Synteny	CmoCh04G026810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAAGAAAGAAGAAGGCTGTGCAAGAGGGAAGTGAGAGGCTCATCGTCTTCAACCTGCTGCAGTAGTAGGAGGAGGAGATCGGGAACGGCGTCGTTTAAGCAGAGATGCAGTTTACTTGTTAAGGAACAGAGAGCAAGGTTTTACATCCTTCGCCGATGTGTCGTCATGCTCGTCTGCTGGCATTACTACGCCGACCCTTAA

mRNA sequence

ATGATGGAAGAAAGAAGAAGGCTGTGCAAGAGGGAAGTGAGAGGCTCATCGTCTTCAACCTGCTGCAGTAGTAGGAGGAGGAGATCGGGAACGGCGTCGTTTAAGCAGAGATGCAGTTTACTTGTTAAGGAACAGAGAGCAAGGTTTTACATCCTTCGCCGATGTGTCGTCATGCTCGTCTGCTGGCATTACTACGCCGACCCTTAA

Coding sequence (CDS)

ATGATGGAAGAAAGAAGAAGGCTGTGCAAGAGGGAAGTGAGAGGCTCATCGTCTTCAACCTGCTGCAGTAGTAGGAGGAGGAGATCGGGAACGGCGTCGTTTAAGCAGAGATGCAGTTTACTTGTTAAGGAACAGAGAGCAAGGTTTTACATCCTTCGCCGATGTGTCGTCATGCTCGTCTGCTGGCATTACTACGCCGACCCTTAA

Protein sequence

MMEERRRLCKREVRGSSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP

Homology

[Close]

BLAST of CmoCh04G026810 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 9.6e-08
Identity = 29/66 (43.94%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 2  MEERRRLCKRE-----VRGSSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCV 61
          ++E+ +L K++     +  SSS++  S   ++ G  +F ++C+ LVKEQRARFYI+RRCV
Sbjct: 15 LDEKWKLSKKDGGASRITRSSSTSSSSFNGKKQGRCAFTRKCARLVKEQRARFYIMRRCV 74

Query: 62 VMLVCW 63
          +ML+CW
Sbjct: 75 IMLICW 80

[Close]

BLAST of CmoCh04G026810 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.8e-07
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 7  RLCKREVRGSSSSTCCSSR--RRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCW 63
          +L K+E  G +     ++R  R++ G   F ++C  LVKEQRARFYI+RRCVVML+CW
Sbjct: 11 QLSKKESLGDNGGALNTTRSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICW 68

[Close]

BLAST of CmoCh04G026810 vs. ExPASy Swiss-Prot
Match: Q7XXN8 (Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.1e-06
Identity = 22/31 (70.97%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 33 SFKQRCSLLVKEQRARFYILRRCVVMLVCWH 64
          +F Q+CS +VK+QRA+FYILRRC+ MLVCWH
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWH 44

[Close]

BLAST of CmoCh04G026810 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.4e-06
Identity = 33/69 (47.83%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 10  KREVRGSSSSTCCSS-----------RRRRSGTASFKQRCSLLVKEQRARFYILRRCVVM 68
           K  V  SSSS+  SS           R   S ++S  Q+ S L KEQ+ARFYI+RRCV M
Sbjct: 46  KCSVPSSSSSSSSSSSISRSFSRKERRSSSSSSSSITQKYSSLAKEQKARFYIMRRCVAM 105

[Close]

BLAST of CmoCh04G026810 vs. ExPASy Swiss-Prot
Match: Q8LE84 (Small polypeptide DEVIL 18 OS=Arabidopsis thaliana OX=3702 GN=DVL18 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 9.0e-06
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 10  KREVRGSSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYA 67
           K  V  SS+S C  SR      AS  ++C  + KE ++RFYI++RCV+MLVCWH +A
Sbjct: 85  KCPVDTSSTSKCSISRSLSQKGASVTRKCRNMAKEHKSRFYIMKRCVLMLVCWHKHA 141

[Close]

BLAST of CmoCh04G026810 vs. ExPASy TrEMBL
Match: A0A5A7SZH0 (DVL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00410 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17
Identity = 54/68 (79.41%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1  MMEERRRLCKREVRGSSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLV 60
          M EE RRLCKR     +SS+ CS   RRSGTASFKQRCSLLVKEQRARFYILRRCVVMLV
Sbjct: 1  MTEEGRRLCKR-----TSSSACS---RRSGTASFKQRCSLLVKEQRARFYILRRCVVMLV 60

Query: 61 CWHYYADP 69
          CW+YYADP
Sbjct: 61 CWNYYADP 60

[Close]

BLAST of CmoCh04G026810 vs. ExPASy TrEMBL
Match: A0A5N5EYG6 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_031408 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.9e-08
Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 11 REVRGSSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 69
          ++ +GSSS      RR R    SF +RCS+LVKEQRARFYILRRCV ML+CWH   DP
Sbjct: 2  KQGQGSSSRNNFCCRRVREPCRSFGRRCSMLVKEQRARFYILRRCVTMLLCWHERGDP 59

[Close]

BLAST of CmoCh04G026810 vs. ExPASy TrEMBL
Match: A0A5K1EF88 (Uncharacterized protein OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS22368 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.9e-07
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 17 SSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYAD 68
          SSS+C SS+RR     SF  RC+ LVKEQRARFYI+RRCV ML+CW  Y D
Sbjct: 33 SSSSCTSSKRR----PSFTSRCARLVKEQRARFYIMRRCVTMLICWRDYGD 79

[Close]

BLAST of CmoCh04G026810 vs. ExPASy TrEMBL
Match: A0A3N7FP95 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G226250 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.9e-07
Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 24 SRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 69
          S+  R    SF +RCS LVKEQRARFYILRRCV MLVCWH Y +P
Sbjct: 11 SKHVREPCRSFGRRCSSLVKEQRARFYILRRCVTMLVCWHEYGEP 55

[Close]

BLAST of CmoCh04G026810 vs. ExPASy TrEMBL
Match: A0A2P6SKP2 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0367921 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.8e-07
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 16  SSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYAD 68
           SSSS C  S  RR    +F ++C+ LVKEQRARFYI+RRCV ML+CWH Y+D
Sbjct: 76  SSSSNCHKSSNRR---CAFSRKCARLVKEQRARFYIVRRCVTMLICWHDYSD 124

[Close]

BLAST of CmoCh04G026810 vs. NCBI nr
Match: KAG7016303.1 (hypothetical protein SDJN02_21410, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 104.0 bits (258), Expect = 5.2e-19
Identity = 57/68 (83.82%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 1  MMEERRRLCKREVRGSSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLV 60
          MMEERRRLC+ EVR SSS+  CS   RRS TASFKQRCSLLVKEQRARFYILRRCVVMLV
Sbjct: 1  MMEERRRLCRGEVRDSSSA--CS---RRSATASFKQRCSLLVKEQRARFYILRRCVVMLV 60

Query: 61 CWHYYADP 69
          CW+YYADP
Sbjct: 61 CWNYYADP 63

[Close]

BLAST of CmoCh04G026810 vs. NCBI nr
Match: KAE8647306.1 (hypothetical protein Csa_004317 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 2.2e-17
Identity = 54/68 (79.41%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1  MMEERRRLCKREVRGSSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLV 60
          M EERRRLCKR     + S+ CS   RRSGTASFKQRCSLLVKEQRARFYILRRCVVMLV
Sbjct: 1  MTEERRRLCKR-----TPSSACS---RRSGTASFKQRCSLLVKEQRARFYILRRCVVMLV 60

Query: 61 CWHYYADP 69
          CW+YYADP
Sbjct: 61 CWNYYADP 60

[Close]

BLAST of CmoCh04G026810 vs. NCBI nr
Match: KAA0036490.1 (DVL-like protein [Cucumis melo var. makuwa] >TYJ99996.1 DVL-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 3.8e-17
Identity = 54/68 (79.41%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1  MMEERRRLCKREVRGSSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLV 60
          M EE RRLCKR     +SS+ CS   RRSGTASFKQRCSLLVKEQRARFYILRRCVVMLV
Sbjct: 1  MTEEGRRLCKR-----TSSSACS---RRSGTASFKQRCSLLVKEQRARFYILRRCVVMLV 60

Query: 61 CWHYYADP 69
          CW+YYADP
Sbjct: 61 CWNYYADP 60

[Close]

BLAST of CmoCh04G026810 vs. NCBI nr
Match: KAB2595958.1 (hypothetical protein D8674_031408 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 66.2 bits (160), Expect = 1.2e-07
Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 11 REVRGSSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 69
          ++ +GSSS      RR R    SF +RCS+LVKEQRARFYILRRCV ML+CWH   DP
Sbjct: 2  KQGQGSSSRNNFCCRRVREPCRSFGRRCSMLVKEQRARFYILRRCVTMLLCWHERGDP 59

[Close]

BLAST of CmoCh04G026810 vs. NCBI nr
Match: DAD28534.1 (TPA_asm: hypothetical protein HUJ06_030002 [Nelumbo nucifera])

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-07
Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 16 SSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 69
          +SSS CC  R  R    SF QRCS LVKEQRARFYILRRCV MLVCW+   DP
Sbjct: 4  NSSSFCC--RHLRDPCRSFGQRCSRLVKEQRARFYILRRCVTMLVCWNECGDP 54

[Close]

BLAST of CmoCh04G026810 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 )

HSP 1 Score: 57.0 bits (136), Expect = 6.9e-09
Identity = 29/66 (43.94%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 2  MEERRRLCKRE-----VRGSSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCV 61
          ++E+ +L K++     +  SSS++  S   ++ G  +F ++C+ LVKEQRARFYI+RRCV
Sbjct: 15 LDEKWKLSKKDGGASRITRSSSTSSSSFNGKKQGRCAFTRKCARLVKEQRARFYIMRRCV 74

Query: 62 VMLVCW 63
          +ML+CW
Sbjct: 75 IMLICW 80

[Close]

BLAST of CmoCh04G026810 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 )

HSP 1 Score: 54.7 bits (130), Expect = 3.4e-08
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 7  RLCKREVRGSSSSTCCSSR--RRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCW 63
          +L K+E  G +     ++R  R++ G   F ++C  LVKEQRARFYI+RRCVVML+CW
Sbjct: 11 QLSKKESLGDNGGALNTTRSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICW 68

[Close]

BLAST of CmoCh04G026810 vs. TAIR 10
Match: AT2G36985.1 (DVL family protein )

HSP 1 Score: 53.5 bits (127), Expect = 7.6e-08
Identity = 22/31 (70.97%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 33 SFKQRCSLLVKEQRARFYILRRCVVMLVCWH 64
          +F Q+CS +VK+QRA+FYILRRC+ MLVCWH
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWH 44

[Close]

BLAST of CmoCh04G026810 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 )

HSP 1 Score: 52.4 bits (124), Expect = 1.7e-07
Identity = 33/69 (47.83%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 10  KREVRGSSSSTCCSS-----------RRRRSGTASFKQRCSLLVKEQRARFYILRRCVVM 68
           K  V  SSSS+  SS           R   S ++S  Q+ S L KEQ+ARFYI+RRCV M
Sbjct: 46  KCSVPSSSSSSSSSSSISRSFSRKERRSSSSSSSSITQKYSSLAKEQKARFYIMRRCVAM 105

[Close]

BLAST of CmoCh04G026810 vs. TAIR 10
Match: AT5G59510.1 (ROTUNDIFOLIA like 5 )

HSP 1 Score: 50.4 bits (119), Expect = 6.4e-07
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 10  KREVRGSSSSTCCSSRRRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYA 67
           K  V  SS+S C  SR      AS  ++C  + KE ++RFYI++RCV+MLVCWH +A
Sbjct: 85  KCPVDTSSTSKCSISRSLSQKGASVTRKCRNMAKEHKSRFYIMKRCVLMLVCWHKHA 141

The following BLAST results are available for this feature:

BLAST of CmoCh04G026810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8S3	9.6e-08	43.94	Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1	[more]
Q6IM93	4.8e-07	50.00	Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1	[more]
Q7XXN8	1.1e-06	70.97	Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1	[more]
Q8L7D0	2.4e-06	47.83	Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1	[more]
Q8LE84	9.0e-06	47.37	Small polypeptide DEVIL 18 OS=Arabidopsis thaliana OX=3702 GN=DVL18 PE=2 SV=1	[more]

BLAST of CmoCh04G026810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZH0	1.8e-17	79.41	DVL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G004...	[more]
A0A5N5EYG6	5.9e-08	60.34	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]
A0A5K1EF88	2.9e-07	64.71	Uncharacterized protein OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS22368 PE=4 SV...	[more]
A0A3N7FP95	2.9e-07	68.89	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G226250 PE=4 ...	[more]
A0A2P6SKP2	3.8e-07	61.54	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0367921 PE=4...	[more]

BLAST of CmoCh04G026810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016303.1	5.2e-19	83.82	hypothetical protein SDJN02_21410, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAE8647306.1	2.2e-17	79.41	hypothetical protein Csa_004317 [Cucumis sativus]	[more]
KAA0036490.1	3.8e-17	79.41	DVL-like protein [Cucumis melo var. makuwa] >TYJ99996.1 DVL-like protein [Cucumi...	[more]
KAB2595958.1	1.2e-07	60.34	hypothetical protein D8674_031408 [Pyrus ussuriensis x Pyrus communis]	[more]
DAD28534.1	1.6e-07	67.92	TPA_asm: hypothetical protein HUJ06_030002 [Nelumbo nucifera]	[more]

BLAST of CmoCh04G026810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39705.1	6.9e-09	43.94	ROTUNDIFOLIA like 8	[more]
AT3G55515.1	3.4e-08	50.00	ROTUNDIFOLIA like 7	[more]
AT2G36985.1	7.6e-08	70.97	DVL family protein	[more]
AT2G29125.1	1.7e-07	47.83	ROTUNDIFOLIA like 2	[more]
AT5G59510.1	6.4e-07	47.37	ROTUNDIFOLIA like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012552	DVL	PFAM	PF08137	DVL	coord: 43..61 e-value: 8.8E-13 score: 47.8
None	No IPR available	PANTHER	PTHR33102	DVL19-RELATED-RELATED	coord: 16..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G026810.1	CmoCh04G026810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0048367	shoot system development
cellular_component	GO:0005886	plasma membrane