CmoCh04G026040 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G026040
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr04: 19000763 .. 19002767 (+)
RNA-Seq ExpressionCmoCh04G026040
SyntenyCmoCh04G026040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGAGGTAGAGAAGACACTAGAGGTACAAATAGTAATGATTTGTAGTCTCCGTTTTGTTGTTCAAAAGCAGCTGATTACCTCGTCTATAAATAATTAGTTTATGAATGCTCTATTCTGTTGTATAATCTGCTAAATGTGCGCTGTATCTAATTTCCATTAGTTATGCAAAGTTGATGTTCATTTTATTGCATAGAGGAATTCAATGAGCAAAAGTTCCCCACCCCCCCTTTTCTTAATCATTATGTGGCGTCCAATCTTTTATCAATGCACGCTTTGATGACAATACCTAGCTATTAAAGATCAGATAGTTTACTGGCTAGTAGTATGGTAACAAAGGCCCCGGATTTACTATCGCGTTATCACTTGGGCACTTGAAGTAGGCATCTTTATTGGTCTTGTGCTAATATCCATTTAAGGACGTGCAGACAGATAACCTTGTAGGATAATTTAAGCATGGTGTCAAGGGCATTAGATTTAGCTTAATGGTTATCGAAATCCCTTGGACTACTAATTAAATTACCAATATCCTATGTTCTTGACTTCCAAATATTCTAAGGGAGGGACCTAATTTCAAGCTTGGTGAACCATGATAGCCTAAAGAGGCAGAGAGCATTAAGATCCTCTGGTTTCTTTACATCCACAAAGATCCCGCTCTATGTATTTGAGAAAATGAAGCGTTGCTCAACCATTTGCTCTTTCGTTGTCTGTTCGCTTTCAAGGGCTGAAATTTCATGTGCCAACCTTTCAGCTTAGTTTGGTGCCCTCCCAAGGATTTTGAAGATTGGCTTCCTAAGTTGCTATTAGGGTGATGCTTAAAGACTGAAAGGACCCTTTCTTACAACTATAGAAGGTCAAAATTTCTCGATTTAGATGTCTCATTTGGGGAGGTTGACTTAAAGAGTTCATGGTTTTCTACTTTGAAGTTTAAATGTCTAATGGGAGAAAATGAAGATTTGTAGCAGATCTTGGTGACCCAATGGAATAAGGTGTAAAAGTACATTGGGATGAACCTCTGTATTTATTTTATTGCTTTTACTTTGCCTGTCTTTCTTTATTATATAACTAGTTTTCAGGGAAGAATCTAAAGTGGGAAGAGTTCAAGAAGTCCAAATTAATGATATTATCCATCAATAAATAAAAGGAGCCGGTGCAGTTCAATTCAGGTGAGATATCAGGTCAGCAAGTGAAAGCAAATCTAAGCAAGTTATTATTATCCTTTAGGTATGTTCTATGAAAAATTAAATGGTCGAATGTGTTTCCTGCCTTATTGGGTTATTTTGATTTTTGCTGAACTAAGTTCTTGAGTAATAATTTGAAGTATACAATCTTCTGTAGTTCTTCTCTATATCAATAGAGTCACACTTAACTGAATTTCATTAAAAAAGTTGAACATAAAATACTTCCGCTGCCCCTTGTTACTGGTGATCTGTTTTTCACAATGGACACATAATTTTGAAATTATGTCTAGATCTGTTACTGAAATGTTGATGGTGTGCATGGCAAGCTAAAAATTTATTGGCGAAGAGAAGACAGGACAACATCTTGGAGGGAGCTGTCCCTCTGCATGGCCGCTTTGAACTCATCGAAGGTAACCTTTCCATCACTGTTGGCATCCATCAAATCAAATATTTCATCTAATTTTCCAGGTTCTGTGATGTCCACTGGAAGGCAATCGTCAGGTAAAGCCTGTTTAAAATTATGAAGGTCATCATGCTTAAAGAAACAAAAGAAAAAGCATAATACCAAGTAACATGAATGAAGCAAAAATCAAGGAAGGAGCATTACTCTCAACATTGATGCAACTTCTTCCTTTGTGATGCACCCGGACCGATCTGTATCGTACATCTATCAACCATAATAATCATTAAAGCTTTGTGATTGTAGTATGTTCGCAAAGTAATGGATTCGGTAACAATGTTTTCTATGTGCAGGACATTCTCAGCAACAAGGTTCGTGCTCATTGGCTACAAGTTGCAGTAACAATAAACAGTATTGGCTAA

mRNA sequence

ATGAGAGAGGTAGAGAAGACACTAGAGGTACAAATAGTAATGATTTGTAGTCTCCGTTTTGTTGTTCAAAAGCAGCTGATTACCTCAGAAGACAGGACAACATCTTGGAGGGAGCTGTCCCTCTGCATGGCCGCTTTGAACTCATCGAAGGACATTCTCAGCAACAAGGTTCGTGCTCATTGGCTACAAGTTGCAGTAACAATAAACAGTATTGGCTAA

Coding sequence (CDS)

ATGAGAGAGGTAGAGAAGACACTAGAGGTACAAATAGTAATGATTTGTAGTCTCCGTTTTGTTGTTCAAAAGCAGCTGATTACCTCAGAAGACAGGACAACATCTTGGAGGGAGCTGTCCCTCTGCATGGCCGCTTTGAACTCATCGAAGGACATTCTCAGCAACAAGGTTCGTGCTCATTGGCTACAAGTTGCAGTAACAATAAACAGTATTGGCTAA

Protein sequence

MREVEKTLEVQIVMICSLRFVVQKQLITSEDRTTSWRELSLCMAALNSSKDILSNKVRAHWLQVAVTINSIG
Homology
BLAST of CmoCh04G026040 vs. NCBI nr
Match: KAG6602227.1 (hypothetical protein SDJN03_07460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 85.9 bits (211), Expect = 1.6e-13
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 0

Query: 30  EDRTTSWRELSLCMAALNSSKDILSNKVRAHWLQVAVTINSIG 73
           EDRTTSWRELSLCMAALNSSKDILSNKVRA WLQVAVTINSIG
Sbjct: 708 EDRTTSWRELSLCMAALNSSKDILSNKVRARWLQVAVTINSIG 750

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6602227.11.6e-1397.67hypothetical protein SDJN03_07460, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G026040.1CmoCh04G026040.1mRNA