CmoCh04G025900 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G025900
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr04: 18926576 .. 18928306 (+)
RNA-Seq ExpressionCmoCh04G025900
SyntenyCmoCh04G025900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTACTTCGATCTCCTGTTGCAGAAGTGCTCTTCCTTCTCGCAAATCAAGCAACTCCAAGCAAACCTCATCACCAATGGCCATTTTCACTTCTCTTCCTCTCGCACCAAGCTTCTCGAGCTCTGCGCCATCTCCCCCTTCGGCGACCTTTCTCATGCCCTCCATATTTTCCGCCATATCCACTCCCCTTCCACCAAGGATTGGAACGCCGTCATTCGCGGCACCGCCTTGAGCTCCAATCCCTCAAATGCCATTTTCTGGTACAGAACCATGACCGCGTCAAATGGGCCTCATAGAGTCGACGCTCTCACCTGCTCCTTTGCCCTCAAAGCTTGTGCGCGTGCGTTGGCCCGTTCTGAAGTGATGCAATTGCATTCACAGGTTTTGCGATTTGGGTTCGATGCTGATGTTCTCCTACAGACTACATTGCTTGATGCGTACGCAAAAGTTGAGGATCTTGATCAGGCCCAGAAGGTGTTCGACGAAATGCCAGAACCAGATATCGCCTCGTGGAATTCTCTGATTGCTGGGTTTGCTCAAGGGGGTCGACCAAGCGATGCTATAGACTTGTTTAAGAGAATGAAGGAGGATGGGAATTTGAGGCCCAATGAAGTAACCGTTCAAGGTGCTCTCTCGGCGTGTTCCCAATTGGGTACTTTGAAAGAAGGTGAGAATGTTCGCAAATACATAGCAGAGGAGAATTTAGACACAGTTGTGCAGGTTTGTAATGTTGTTATTGATATGTATGCTAAATGTGGATCTGTGGATAAAGCTTATTGGGTGTTTGAGAATATGAGATGTGAGAAAAGTTTAATCACATGGAATACAATGATAATGGCATTTGCAATGCATGGTGATGGACACAAAGCGTTAGATCTTTTTGAAAAGTTGGGTCGATCTGGTATATATCCTGATGCAATATCATATCTAGCGGTGCTATGCGCCTGTAACCACGCAGGGCTCATAGAGGATGGACTTAAGCTCTTCAATTCAATGGTGCAAAGGGGTGTGGCGCCAAATATAAAGCATTACGGAGTAGTGGTCGATTTGTTGGGTCGAGCCGGGCGTCTGAAAGAAGCTTATGAAATTGTAAGTTCAATGCCTTTTCCTAATATGGTTCTGTGGCAGACTTTGCTTGGTGCTTGCAGGACTTATGGGGATGTAAAAATGGCAGAGATGGCATCTAGGAAGCTAGTAGAGATGGGCTTTATTAGCTGTGGTGATTTTGTTCTGTTGTCGAACGTGTATGCTGCTCGTCGGAGATGGGATGACGTTGGGCGAGTTAGGGATGCCATGAGAAGAAGGGATGTGAAGAAGACGCCTGGATTTAGTTACATAGAAGTGAAAGGTAATATGCACAAATTTCTTTATGGCGACCGAAGCCATTCGAGTTGTCGTGAAATTTATGCAAAGCTTGATGAGATCATGTTTAGGATCAAAGCCATTGGATATACAGCTGAAACTGGTAATGTATTGCATGATATTGAGGAGGAGGACAAGGAGAACGTGCTGTGTTATCATAGTGAGAAGCTTGCTGTAGCCTTTGGATTATCTTGTACTGAAGAAGGGACCCCAATCCAAGTGATTAAGAATTTAAGGATTTGTGGGGATTGTCATGTTGTGATTAAGCTAATATCAAAGAGTTATAATCGAGAAATTTTCGTAAGGGACCGAACTCGATTTCACCGGTTTAAAGATGGTTTGTGTTCTTGCAAAGATTATTGGTGA

mRNA sequence

ATGGCCTACTTCGATCTCCTGTTGCAGAAGTGCTCTTCCTTCTCGCAAATCAAGCAACTCCAAGCAAACCTCATCACCAATGGCCATTTTCACTTCTCTTCCTCTCGCACCAAGCTTCTCGAGCTCTGCGCCATCTCCCCCTTCGGCGACCTTTCTCATGCCCTCCATATTTTCCGCCATATCCACTCCCCTTCCACCAAGGATTGGAACGCCGTCATTCGCGGCACCGCCTTGAGCTCCAATCCCTCAAATGCCATTTTCTGGTACAGAACCATGACCGCGTCAAATGGGCCTCATAGAGTCGACGCTCTCACCTGCTCCTTTGCCCTCAAAGCTTGTGCGCGTGCGTTGGCCCGTTCTGAAGTGATGCAATTGCATTCACAGGTTTTGCGATTTGGGTTCGATGCTGATGTTCTCCTACAGACTACATTGCTTGATGCGTACGCAAAAGTTGAGGATCTTGATCAGGCCCAGAAGGTGTTCGACGAAATGCCAGAACCAGATATCGCCTCGTGGAATTCTCTGATTGCTGGGTTTGCTCAAGGGGGTCGACCAAGCGATGCTATAGACTTGTTTAAGAGAATGAAGGAGGATGGGAATTTGAGGCCCAATGAAGTAACCGTTCAAGGTGCTCTCTCGGCGTGTTCCCAATTGGGTACTTTGAAAGAAGGTGAGAATGTTCGCAAATACATAGCAGAGGAGAATTTAGACACAGTTGTGCAGGTTTGTAATGTTGTTATTGATATGTATGCTAAATGTGGATCTGTGGATAAAGCTTATTGGGTGTTTGAGAATATGAGATGTGAGAAAAGTTTAATCACATGGAATACAATGATAATGGCATTTGCAATGCATGGTGATGGACACAAAGCGTTAGATCTTTTTGAAAAGTTGGGTCGATCTGGTATATATCCTGATGCAATATCATATCTAGCGGTGCTATGCGCCTGTAACCACGCAGGGCTCATAGAGGATGGACTTAAGCTCTTCAATTCAATGGTGCAAAGGGGTGTGGCGCCAAATATAAAGCATTACGGAGTAGTGGTCGATTTGTTGGGTCGAGCCGGGCGTCTGAAAGAAGCTTATGAAATTGTAAGTTCAATGCCTTTTCCTAATATGGTTCTGTGGCAGACTTTGCTTGGTGCTTGCAGGACTTATGGGGATGTAAAAATGGCAGAGATGGCATCTAGGAAGCTAGTAGAGATGGGCTTTATTAGCTGTGGTGATTTTGTTCTGTTGTCGAACGTGTATGCTGCTCGTCGGAGATGGGATGACGTTGGGCGAGTTAGGGATGCCATGAGAAGAAGGGATGTGAAGAAGACGCCTGGATTTAGTTACATAGAAGTGAAAGGTAATATGCACAAATTTCTTTATGGCGACCGAAGCCATTCGAGTTGTCGTGAAATTTATGCAAAGCTTGATGAGATCATGTTTAGGATCAAAGCCATTGGATATACAGCTGAAACTGGTAATGTATTGCATGATATTGAGGAGGAGGACAAGGAGAACGTGCTGTGTTATCATAGTGAGAAGCTTGCTGTAGCCTTTGGATTATCTTGTACTGAAGAAGGGACCCCAATCCAAGTGATTAAGAATTTAAGGATTTGTGGGGATTGTCATGTTGTGATTAAGCTAATATCAAAGAGTTATAATCGAGAAATTTTCGTAAGGGACCGAACTCGATTTCACCGGTTTAAAGATGGTTTGTGTTCTTGCAAAGATTATTGGTGA

Coding sequence (CDS)

ATGGCCTACTTCGATCTCCTGTTGCAGAAGTGCTCTTCCTTCTCGCAAATCAAGCAACTCCAAGCAAACCTCATCACCAATGGCCATTTTCACTTCTCTTCCTCTCGCACCAAGCTTCTCGAGCTCTGCGCCATCTCCCCCTTCGGCGACCTTTCTCATGCCCTCCATATTTTCCGCCATATCCACTCCCCTTCCACCAAGGATTGGAACGCCGTCATTCGCGGCACCGCCTTGAGCTCCAATCCCTCAAATGCCATTTTCTGGTACAGAACCATGACCGCGTCAAATGGGCCTCATAGAGTCGACGCTCTCACCTGCTCCTTTGCCCTCAAAGCTTGTGCGCGTGCGTTGGCCCGTTCTGAAGTGATGCAATTGCATTCACAGGTTTTGCGATTTGGGTTCGATGCTGATGTTCTCCTACAGACTACATTGCTTGATGCGTACGCAAAAGTTGAGGATCTTGATCAGGCCCAGAAGGTGTTCGACGAAATGCCAGAACCAGATATCGCCTCGTGGAATTCTCTGATTGCTGGGTTTGCTCAAGGGGGTCGACCAAGCGATGCTATAGACTTGTTTAAGAGAATGAAGGAGGATGGGAATTTGAGGCCCAATGAAGTAACCGTTCAAGGTGCTCTCTCGGCGTGTTCCCAATTGGGTACTTTGAAAGAAGGTGAGAATGTTCGCAAATACATAGCAGAGGAGAATTTAGACACAGTTGTGCAGGTTTGTAATGTTGTTATTGATATGTATGCTAAATGTGGATCTGTGGATAAAGCTTATTGGGTGTTTGAGAATATGAGATGTGAGAAAAGTTTAATCACATGGAATACAATGATAATGGCATTTGCAATGCATGGTGATGGACACAAAGCGTTAGATCTTTTTGAAAAGTTGGGTCGATCTGGTATATATCCTGATGCAATATCATATCTAGCGGTGCTATGCGCCTGTAACCACGCAGGGCTCATAGAGGATGGACTTAAGCTCTTCAATTCAATGGTGCAAAGGGGTGTGGCGCCAAATATAAAGCATTACGGAGTAGTGGTCGATTTGTTGGGTCGAGCCGGGCGTCTGAAAGAAGCTTATGAAATTGTAAGTTCAATGCCTTTTCCTAATATGGTTCTGTGGCAGACTTTGCTTGGTGCTTGCAGGACTTATGGGGATGTAAAAATGGCAGAGATGGCATCTAGGAAGCTAGTAGAGATGGGCTTTATTAGCTGTGGTGATTTTGTTCTGTTGTCGAACGTGTATGCTGCTCGTCGGAGATGGGATGACGTTGGGCGAGTTAGGGATGCCATGAGAAGAAGGGATGTGAAGAAGACGCCTGGATTTAGTTACATAGAAGTGAAAGGTAATATGCACAAATTTCTTTATGGCGACCGAAGCCATTCGAGTTGTCGTGAAATTTATGCAAAGCTTGATGAGATCATGTTTAGGATCAAAGCCATTGGATATACAGCTGAAACTGGTAATGTATTGCATGATATTGAGGAGGAGGACAAGGAGAACGTGCTGTGTTATCATAGTGAGAAGCTTGCTGTAGCCTTTGGATTATCTTGTACTGAAGAAGGGACCCCAATCCAAGTGATTAAGAATTTAAGGATTTGTGGGGATTGTCATGTTGTGATTAAGCTAATATCAAAGAGTTATAATCGAGAAATTTTCGTAAGGGACCGAACTCGATTTCACCGGTTTAAAGATGGTTTGTGTTCTTGCAAAGATTATTGGTGA

Protein sequence

MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARSEVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVVQVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKEAYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Homology
[Close]
BLAST of CmoCh04G025900 vs. ExPASy Swiss-Prot
Match: Q9FX24 (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H68 PE=2 SV=2)

HSP 1 Score: 702.6 bits (1812), Expect = 3.7e-201
Identity = 354/582 (60.82%), Postives = 433/582 (74.40%), Query Frame = 0 

Query: 3   YFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIH 62
           Y + ++QKC SFSQIKQLQ++ +T GHF  S  R++LLE CAISPFGDLS A+ IFR+I 
Sbjct: 5   YMETMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIP 64

Query: 63  SPSTKDWNAVIRGTALSSNPSNAIFWYRTM----TASNGPHRVDALTCSFALKACARALA 122
            P T DWNA+IRG A SS+PS A  WYR+M    ++S+   RVDALTCSF LKACARAL 
Sbjct: 65  KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124

Query: 123 RSEVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAG 182
            S + QLH Q+ R G  AD LL TTLLDAY+K  DL  A K+FDEMP  D+ASWN+LIAG
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184

Query: 183 FAQGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDT 242
              G R S+A++L+KRM+ +G +R +EVTV  AL ACS LG +KEGEN+    + +N   
Sbjct: 185 LVSGNRASEAMELYKRMETEG-IRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN--- 244

Query: 243 VVQVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL 302
            V V N  IDMY+KCG VDKAY VFE    +KS++TWNTMI  FA+HG+ H+AL++F+KL
Sbjct: 245 -VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 304

Query: 303 GRSGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRL 362
             +GI PD +SYLA L AC HAGL+E GL +FN+M  +GV  N+KHYG VVDLL RAGRL
Sbjct: 305 EDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRL 364

Query: 363 KEAYEIVSSMP-FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVY 422
           +EA++I+ SM   P+ VLWQ+LLGA   Y DV+MAE+ASR++ EMG  + GDFVLLSNVY
Sbjct: 365 REAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVY 424

Query: 423 AARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIM 482
           AA+ RW DVGRVRD M  + VKK PG SYIE KG +H+F   D+SH   REIY K+DEI 
Sbjct: 425 AAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIR 484

Query: 483 FRIKAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSC---TEEGTPIQVIKNLR 542
           F+I+  GY A+TG VLHDI EE+KEN LCYHSEKLAVA+GL      +E +P++VI NLR
Sbjct: 485 FKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLR 544

Query: 543 ICGDCHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           ICGDCHVV K ISK Y REI VRDR RFHRFKDG CSC+D+W
Sbjct: 545 ICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581

[Close]
BLAST of CmoCh04G025900 vs. ExPASy Swiss-Prot
Match: B8YEK4 (Pentatricopeptide repeat-containing protein OGR1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=OGR1 PE=2 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 1.4e-168
Identity = 308/583 (52.83%), Postives = 401/583 (68.78%), Query Frame = 0 

Query: 3   YFDLLLQKCSSFSQIKQLQANLITNGHF-HFSSSRTKLLELCAISPF-GDLSHALHIFRH 62
           + + LL + +S     Q  A L+T+GH       R + L+  A+SP    L HAL + R 
Sbjct: 9   HLESLLPRLASLRHYLQFHARLLTSGHLGAHPGLRARFLDRLALSPHPAALPHALLLLRS 68

Query: 63  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 122
           + +P+T D NA +RG A S +P+ ++             R DAL+ SFALKA AR     
Sbjct: 69  LPTPATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFALKASARCSDAH 128

Query: 123 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 182
             +QLH+ VLR G  ADV L TTLLD+YAK  DL  A+KVFDEM   D+A+WNSL+AG A
Sbjct: 129 TTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATWNSLLAGLA 188

Query: 183 QGGRPSDAIDLFKRMKED-----GNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEEN 242
           QG  P+ A+ LF R+            PNEVT+  ALSAC+Q+G LK+G  V ++     
Sbjct: 189 QGTEPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFG 248

Query: 243 LDTVVQVCNVVIDMYAKCGSVDKAYWVFENMRCE-KSLITWNTMIMAFAMHGDGHKALDL 302
           LD  V+VCN +IDMY+KCGS+ +A  VF +++ E ++L+++N  I A +MHG G  AL L
Sbjct: 249 LDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALRL 308

Query: 303 FEKLGRSGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGR 362
           F+++  + I PD ++YLAVLC CNH+GL++DGL++FNSM    VAPN+KHYG +VDLLGR
Sbjct: 309 FDEM-PTRIEPDGVTYLAVLCGCNHSGLVDDGLRVFNSM---RVAPNMKHYGTIVDLLGR 368

Query: 363 AGRLKEAYEIVSSMPFP-NMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLL 422
           AGRL EAY+ V SMPFP ++VLWQTLLGA + +G V++AE+A+ KL E+G    GD+VLL
Sbjct: 369 AGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLL 428

Query: 423 SNVYAARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKL 482
           SNVYA++ RW DVGRVRD MR  DV+K PGFSY E+ G MHKF+ GD+ H   +EIY  L
Sbjct: 429 SNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEIYRAL 488

Query: 483 DEIMFRIKAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNL 542
           ++I+ RI  +GY  ET NVLHDI EE+K+  LCYHSEKLA+AFGL  T  G  ++VIKNL
Sbjct: 489 EDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNL 548

Query: 543 RICGDCHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           RICGDCHVV KLISK+Y R I +RDR RFHRF+DG CSC+DYW
Sbjct: 549 RICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW 587

[Close]
BLAST of CmoCh04G025900 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 465.3 bits (1196), Expect = 1.0e-129
Identity = 238/571 (41.68%), Postives = 362/571 (63.40%), Query Frame = 0 

Query: 12  SSFSQIKQLQANLITNGHFHFSSSRTK--LLELCAISPFGDLSHALHIFRHIHSP-STKD 71
           SS ++++Q+ A  I +G     +   K  +  L ++     +S+A  +F  I  P +   
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 72  WNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARSEVMQLHSQ 131
           WN +IRG A   N  +A   YR M  S G    D  T  F +KA            +HS 
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVS-GLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147

Query: 132 VLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRPSDA 191
           V+R GF + + +Q +LL  YA   D+  A KVFD+MPE D+ +WNS+I GFA+ G+P +A
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 207

Query: 192 IDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVVQVCNVVID 251
           + L+  M   G ++P+  T+   LSAC+++G L  G+ V  Y+ +  L   +   NV++D
Sbjct: 208 LALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 267

Query: 252 MYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL-GRSGIYPDA 311
           +YA+CG V++A  +F+ M  +K+ ++W ++I+  A++G G +A++LF+ +    G+ P  
Sbjct: 268 LYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 327

Query: 312 ISYLAVLCACNHAGLIEDGLKLFNSMVQR-GVAPNIKHYGVVVDLLGRAGRLKEAYEIVS 371
           I+++ +L AC+H G++++G + F  M +   + P I+H+G +VDLL RAG++K+AYE + 
Sbjct: 328 ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIK 387

Query: 372 SMPF-PNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRWDD 431
           SMP  PN+V+W+TLLGAC  +GD  +AE A  +++++     GD+VLLSN+YA+ +RW D
Sbjct: 388 SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 447

Query: 432 VGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAIGY 491
           V ++R  M R  VKK PG S +EV   +H+FL GD+SH     IYAKL E+  R+++ GY
Sbjct: 448 VQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 507

Query: 492 TAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVVIKL 551
             +  NV  D+EEE+KEN + YHSEK+A+AF L  T E +PI V+KNLR+C DCH+ IKL
Sbjct: 508 VPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKL 567

Query: 552 ISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           +SK YNREI VRDR+RFH FK+G CSC+DYW
Sbjct: 568 VSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]
BLAST of CmoCh04G025900 vs. ExPASy Swiss-Prot
Match: Q9LXY5 (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H80 PE=2 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 8.7e-126
Identity = 226/574 (39.37%), Postives = 359/574 (62.54%), Query Frame = 0 

Query: 7   LLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIHS-PS 66
           +LQ C+S  +++++ +++I NG  H  S    LL  CA+S  G LSHA  +F H  S PS
Sbjct: 11  MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70

Query: 67  TKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARSEVMQL 126
           T DWN +IRG + SS+P N+I +Y  M  S+   R D  T +FALK+C R  +  + +++
Sbjct: 71  TSDWNYLIRGFSNSSSPLNSILFYNRMLLSS-VSRPDLFTFNFALKSCERIKSIPKCLEI 130

Query: 127 HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRP 186
           H  V+R GF  D ++ T+L+  Y+    ++ A KVFDEMP  D+ SWN +I  F+  G  
Sbjct: 131 HGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLH 190

Query: 187 SDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVVQVCNV 246
           + A+ ++KRM  +G +  +  T+   LS+C+ +  L  G  + +   +   ++ V V N 
Sbjct: 191 NQALSMYKRMGNEG-VCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 250

Query: 247 VIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIYP 306
           +IDMYAKCGS++ A  VF  MR ++ ++TWN+MI+ + +HG G +A+  F K+  SG+ P
Sbjct: 251 LIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 310

Query: 307 DAISYLAVLCACNHAGLIEDGLKLFNSM-VQRGVAPNIKHYGVVVDLLGRAGRLKEAYEI 366
           +AI++L +L  C+H GL+++G++ F  M  Q  + PN+KHYG +VDL GRAG+L+ + E+
Sbjct: 311 NAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 370

Query: 367 V-SSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRW 426
           + +S    + VLW+TLLG+C+ + ++++ E+A +KLV++   + GD+VL++++Y+A    
Sbjct: 371 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDA 430

Query: 427 DDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAI 486
                +R  +R  D++  PG+S+IE+   +HKF+  D+ H     IY++L E++ R    
Sbjct: 431 QAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILA 490

Query: 487 GYTAETGN-VLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVV 546
           GY  E  N     + +    +    HSEKLA+A+GL  T  GT +++ KNLR+C DCH  
Sbjct: 491 GYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSF 550

Query: 547 IKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
            K +SK++NREI VRDR RFH F DG+CSC DYW
Sbjct: 551 TKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581

[Close]
BLAST of CmoCh04G025900 vs. ExPASy Swiss-Prot
Match: Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 440.3 bits (1131), Expect = 3.4e-122
Identity = 230/575 (40.00%), Postives = 351/575 (61.04%), Query Frame = 0 

Query: 6   LLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPF-GDLSHALHIFRHIHSP 65
           LL+ KC+S  ++ Q+QA  I   H    S   KL+  C  SP    +S+A H+F  +  P
Sbjct: 34  LLISKCNSLRELMQIQAYAI-KSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 93

Query: 66  STKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARSEVMQ 125
               +N++ RG +  +NP   +F        +G    D  T    LKACA A A  E  Q
Sbjct: 94  DIVIFNSMARGYSRFTNPLE-VFSLFVEILEDG-ILPDNYTFPSLLKACAVAKALEEGRQ 153

Query: 126 LHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGR 185
           LH   ++ G D +V +  TL++ Y + ED+D A+ VFD + EP +  +N++I G+A+  R
Sbjct: 154 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 213

Query: 186 PSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVVQVCN 245
           P++A+ LF+ M +   L+PNE+T+   LS+C+ LG+L  G+ + KY  + +    V+V  
Sbjct: 214 PNEALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNT 273

Query: 246 VVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIY 305
            +IDM+AKCGS+D A  +FE MR  K    W+ MI+A+A HG   K++ +FE++    + 
Sbjct: 274 ALIDMFAKCGSLDDAVSIFEKMR-YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 333

Query: 306 PDAISYLAVLCACNHAGLIEDGLKLFNSMVQR-GVAPNIKHYGVVVDLLGRAGRLKEAYE 365
           PD I++L +L AC+H G +E+G K F+ MV + G+ P+IKHYG +VDLL RAG L++AYE
Sbjct: 334 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE 393

Query: 366 IVSSMPF-PNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRR 425
            +  +P  P  +LW+ LL AC ++ ++ +AE  S ++ E+     GD+V+LSN+YA  ++
Sbjct: 394 FIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKK 453

Query: 426 WDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKA 485
           W+ V  +R  M+ R   K PG S IEV   +H+F  GD   S+  +++  LDE++  +K 
Sbjct: 454 WEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 513

Query: 486 IGYTAETGNVLH-DIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHV 545
            GY  +T  V+H ++ +++KE  L YHSEKLA+ FGL  T  GT I+V+KNLR+C DCH 
Sbjct: 514 SGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHN 573

Query: 546 VIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
             KLIS  + R++ +RD  RFH F+DG CSC D+W
Sbjct: 574 AAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603

[Close]
BLAST of CmoCh04G025900 vs. ExPASy TrEMBL
Match: A0A6J1H8R5 (pentatricopeptide repeat-containing protein At1g34160 OS=Cucurbita moschata OX=3662 GN=LOC111461576 PE=3 SV=1)

HSP 1 Score: 1182.5 bits (3058), Expect = 0.0e+00
Identity = 576/576 (100.00%), Postives = 576/576 (100.00%), Query Frame = 0 

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH
Sbjct: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120
           IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS
Sbjct: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120

Query: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240
           QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV
Sbjct: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360
           SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE
Sbjct: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360

Query: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
           AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 576

[Close]
BLAST of CmoCh04G025900 vs. ExPASy TrEMBL
Match: A0A6J1JI91 (pentatricopeptide repeat-containing protein At1g34160 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487208 PE=3 SV=1)

HSP 1 Score: 1162.1 bits (3005), Expect = 0.0e+00
Identity = 565/576 (98.09%), Postives = 570/576 (98.96%), Query Frame = 0 

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH
Sbjct: 23  MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 82

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120
           +HSPSTKDWNAVIRGTALSSNPSNA+FWYRTM ASNGPHRVDALTCSFALKACARALARS
Sbjct: 83  VHSPSTKDWNAVIRGTALSSNPSNALFWYRTMNASNGPHRVDALTCSFALKACARALARS 142

Query: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 143 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 202

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240
           QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENV KYI EENLDT+V
Sbjct: 203 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVHKYIVEENLDTIV 262

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDG+KALDLFEKLGR
Sbjct: 263 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGYKALDLFEKLGR 322

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360
           SGI PDAISYLAVLCACNHAGLIEDGLKL NSM+QRGVAPNIKHYGVVVDLLGRAGRLKE
Sbjct: 323 SGICPDAISYLAVLCACNHAGLIEDGLKLCNSMMQRGVAPNIKHYGVVVDLLGRAGRLKE 382

Query: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
           AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 383 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 442

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 443 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 502

Query: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KAIGYTAETGNVLHDIEEEDKENVLC HSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 503 KAIGYTAETGNVLHDIEEEDKENVLCCHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 562

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 563 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 598

[Close]
BLAST of CmoCh04G025900 vs. ExPASy TrEMBL
Match: A0A0A0KB77 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G052690 PE=3 SV=1)

HSP 1 Score: 1038.5 bits (2684), Expect = 1.1e-299
Identity = 499/576 (86.63%), Postives = 538/576 (93.40%), Query Frame = 0 

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYF+LLLQKCSSFSQIKQLQANLI NG FHFSSSRTKLLELCAIS FGDLS+ALHIFR+
Sbjct: 1   MAYFNLLLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIFRY 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120
           I  PST DWNAVIRGTALSS+P+NA+FWYR M ASNG HR+DALTCSFALKACARALARS
Sbjct: 61  IPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARS 120

Query: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           E +QLHSQ+LRFGF+ADVLLQTTLLDAYAK+ DLD AQK+FDEMP+PDIASWN+LIAGFA
Sbjct: 121 EAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240
           QG RP+DAI  FKRMK DGNLRPN VTVQGAL ACSQLG LKEGE+V KYI EE L++ V
Sbjct: 181 QGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGS+DKAYWVFENMRC+KSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360
           SG+ PDA+SYLAVLCACNHAGL+EDGLKLFNSM QRG+ PNIKHYG +VDLLGRAGRLKE
Sbjct: 301 SGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKE 360

Query: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
           AY+IVSS+PFPNMVLWQTLLGACRTYGDV+MAE+ASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYDIVSSLPFPNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           +RWDDVGRVRDAMRRRDVKKTPGFSYIE+KG M+KF+ GD+SHSSCREIYAKLDEI  RI
Sbjct: 421 QRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KA GY+A+T NVLHDI +EDKEN LCYHSEKLAVAFGL+CTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISK Y REI VRDRTRFHRFK+GLCSCKDYW
Sbjct: 541 VVIKLISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576

[Close]
BLAST of CmoCh04G025900 vs. ExPASy TrEMBL
Match: A0A6J1BW13 (pentatricopeptide repeat-containing protein At1g34160 OS=Momordica charantia OX=3673 GN=LOC111006231 PE=3 SV=1)

HSP 1 Score: 1031.9 bits (2667), Expect = 9.9e-298
Identity = 498/576 (86.46%), Postives = 528/576 (91.67%), Query Frame = 0 

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYFDLLLQKCSSFSQIKQLQANLITNG F  SSSRTKLLELCAISPFGDL HA+ IFRH
Sbjct: 18  MAYFDLLLQKCSSFSQIKQLQANLITNGRFQLSSSRTKLLELCAISPFGDLPHAIRIFRH 77

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120
           I +P T DWNAVIRGTALSS+P+NA+ WYR M AS GPHRVDALTCSF LKACARALARS
Sbjct: 78  IRAPPTNDWNAVIRGTALSSDPANAVLWYRAMAASIGPHRVDALTCSFTLKACARALARS 137

Query: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           E MQLHSQ+LRFGFDAD+LLQTTLLDAYAKV DLD+AQK+FDE+P+PDIASWN+LIAGFA
Sbjct: 138 EAMQLHSQLLRFGFDADILLQTTLLDAYAKVGDLDRAQKLFDEIPQPDIASWNALIAGFA 197

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240
           QG RP DAI LFKRMKEDG LRPNEVTVQGAL ACSQLG LKEGE V KYI EENLD  V
Sbjct: 198 QGSRPGDAIALFKRMKEDGYLRPNEVTVQGALLACSQLGALKEGEEVHKYIIEENLDMNV 257

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGSVDKAYWVF+NMRCEKSLI+WNTMIMAFA+HG G+KALDLFEKLG 
Sbjct: 258 QVCNVVIDMYAKCGSVDKAYWVFQNMRCEKSLISWNTMIMAFAIHGHGYKALDLFEKLGL 317

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360
           SGI PDA+SYL VLCACNH GL+EDG+KLFNSM +RG+APNIKHYG VVDLLGRAGRLKE
Sbjct: 318 SGISPDAVSYLVVLCACNHGGLVEDGVKLFNSMGKRGLAPNIKHYGSVVDLLGRAGRLKE 377

Query: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
           AYEIV+SMPFPNMVLWQTLLGACRTYG+V+MAE+ASRKLVEMGFISCGDFVLLSNVYAA 
Sbjct: 378 AYEIVNSMPFPNMVLWQTLLGACRTYGNVEMAELASRKLVEMGFISCGDFVLLSNVYAAC 437

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           +RWDDVGR+RDAMRRRDVKKTPGFSY EVKG MHKF YGD++HSSC EIYAKLDEI FRI
Sbjct: 438 QRWDDVGRIRDAMRRRDVKKTPGFSYTEVKGKMHKFAYGDQNHSSCHEIYAKLDEIKFRI 497

Query: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KA GY AETGNVLHDI EEDKEN LCYHSEKLAVAFGL CTEEGT IQVIKNLRIC DCH
Sbjct: 498 KACGYAAETGNVLHDIGEEDKENALCYHSEKLAVAFGLICTEEGTLIQVIKNLRICVDCH 557

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISK YNREI VRDRTRFHRFK+GLCSCKDYW
Sbjct: 558 VVIKLISKIYNREIIVRDRTRFHRFKEGLCSCKDYW 593

[Close]
BLAST of CmoCh04G025900 vs. ExPASy TrEMBL
Match: A0A1S3C3U7 (pentatricopeptide repeat-containing protein At1g34160 OS=Cucumis melo OX=3656 GN=LOC103496566 PE=3 SV=1)

HSP 1 Score: 1023.1 bits (2644), Expect = 4.6e-295
Identity = 489/576 (84.90%), Postives = 532/576 (92.36%), Query Frame = 0 

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYF+LLLQKCSSFS IKQLQANLI NG FHFSSSRTKLLELCA+S  GDLS+ALHIFR+
Sbjct: 1   MAYFNLLLQKCSSFSHIKQLQANLIINGDFHFSSSRTKLLELCAVSSCGDLSYALHIFRY 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120
           I  PST DWNA+IRGTALSS+P+NA+ WYR M ASNGPHR+DALTCSFALKACARALA S
Sbjct: 61  IRYPSTNDWNAIIRGTALSSDPANAVVWYRAMAASNGPHRIDALTCSFALKACARALACS 120

Query: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           E +QLHSQ+LRFGF+ADVLLQTTLLD YAKV DLD AQK+FDEMP PDIASWN+LI+GFA
Sbjct: 121 EAIQLHSQLLRFGFNADVLLQTTLLDVYAKVGDLDLAQKLFDEMPRPDIASWNALISGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240
           QG RP+DAI +FKRMKE GNLRPN VTVQGAL ACSQLGTLKEGENV KYI EE LD  V
Sbjct: 181 QGSRPADAIMMFKRMKEGGNLRPNAVTVQGALLACSQLGTLKEGENVHKYIVEEKLDMNV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGS+DKAYWVFENMRC+KSLITWNTMIMAFAMHGDG++ALDLF+KLGR
Sbjct: 241 QVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGYEALDLFKKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360
           SG+ PDA+SYLAVLCACNHAGL+EDGLKLFN M QRG+ PNIKHYG +VDLLGRAGRLKE
Sbjct: 301 SGMSPDAVSYLAVLCACNHAGLVEDGLKLFNLMAQRGLEPNIKHYGSMVDLLGRAGRLKE 360

Query: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
           AY+IV+S+PFPNMVLWQTLLGACRTYGDV+MAE+AS KLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYDIVNSLPFPNMVLWQTLLGACRTYGDVEMAELASGKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           +RWDDVGRVRDAMR RDVKKTPGFSYIE+KG M++F+YGD+SHSSCREIYAKLDEI  RI
Sbjct: 421 QRWDDVGRVRDAMRIRDVKKTPGFSYIEIKGKMYQFVYGDQSHSSCREIYAKLDEINLRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KA GY+A+T NVLHDI +EDKEN LCYHSEKLAVAFGL+CTEEG PIQVIKNLRICGDCH
Sbjct: 481 KAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGIPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISK YNREI VRDRTRFHRFK+GLCSCKDYW
Sbjct: 541 VVIKLISKIYNREIIVRDRTRFHRFKEGLCSCKDYW 576

[Close]
BLAST of CmoCh04G025900 vs. NCBI nr
Match: XP_022960919.1 (pentatricopeptide repeat-containing protein At1g34160 [Cucurbita moschata] >XP_022960927.1 pentatricopeptide repeat-containing protein At1g34160 [Cucurbita moschata])

HSP 1 Score: 1182.5 bits (3058), Expect = 0.0e+00
Identity = 576/576 (100.00%), Postives = 576/576 (100.00%), Query Frame = 0 

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH
Sbjct: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120
           IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS
Sbjct: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120

Query: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240
           QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV
Sbjct: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360
           SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE
Sbjct: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360

Query: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
           AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 576

[Close]
BLAST of CmoCh04G025900 vs. NCBI nr
Match: KAG6602212.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1179.1 bits (3049), Expect = 0.0e+00
Identity = 574/576 (99.65%), Postives = 574/576 (99.65%), Query Frame = 0 

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH
Sbjct: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120
           IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS
Sbjct: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120

Query: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           EVMQ HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240
           QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENV KYIAEENLDTVV
Sbjct: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360
           SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE
Sbjct: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360

Query: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
           AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 576

[Close]
BLAST of CmoCh04G025900 vs. NCBI nr
Match: XP_023526446.1 (pentatricopeptide repeat-containing protein At1g34160 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1177.5 bits (3045), Expect = 0.0e+00
Identity = 572/576 (99.31%), Postives = 575/576 (99.83%), Query Frame = 0 

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALH+FRH
Sbjct: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHVFRH 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120
           IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS
Sbjct: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120

Query: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240
           QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENV KYIAEENLDTVV
Sbjct: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360
           SGIYPDAISYLAVLCACNHAGLIE+GLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE
Sbjct: 301 SGIYPDAISYLAVLCACNHAGLIEEGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360

Query: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
           AY+IVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYDIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 576

[Close]
BLAST of CmoCh04G025900 vs. NCBI nr
Match: KAG7032894.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 571/576 (99.13%), Postives = 571/576 (99.13%), Query Frame = 0 

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH
Sbjct: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120
           IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTAS GPHRVDALTCSFALKACARALARS
Sbjct: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120

Query: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           EVMQ HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240
           QGGRPSDAIDLFKRMKEDGNLRPN VTVQGALSACSQLGTLKEGENV KYIAEENLDTVV
Sbjct: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360
           SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE
Sbjct: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360

Query: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
           AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KAIGYTAETGNVLHDIEEEDK NVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 576

[Close]
BLAST of CmoCh04G025900 vs. NCBI nr
Match: XP_022990287.1 (pentatricopeptide repeat-containing protein At1g34160 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1162.1 bits (3005), Expect = 0.0e+00
Identity = 565/576 (98.09%), Postives = 570/576 (98.96%), Query Frame = 0 

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH
Sbjct: 23  MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 82

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120
           +HSPSTKDWNAVIRGTALSSNPSNA+FWYRTM ASNGPHRVDALTCSFALKACARALARS
Sbjct: 83  VHSPSTKDWNAVIRGTALSSNPSNALFWYRTMNASNGPHRVDALTCSFALKACARALARS 142

Query: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 143 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 202

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240
           QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENV KYI EENLDT+V
Sbjct: 203 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVHKYIVEENLDTIV 262

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDG+KALDLFEKLGR
Sbjct: 263 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGYKALDLFEKLGR 322

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKE 360
           SGI PDAISYLAVLCACNHAGLIEDGLKL NSM+QRGVAPNIKHYGVVVDLLGRAGRLKE
Sbjct: 323 SGICPDAISYLAVLCACNHAGLIEDGLKLCNSMMQRGVAPNIKHYGVVVDLLGRAGRLKE 382

Query: 361 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
           AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 383 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 442

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 443 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 502

Query: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KAIGYTAETGNVLHDIEEEDKENVLC HSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 503 KAIGYTAETGNVLHDIEEEDKENVLCCHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 562

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 563 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 598

[Close]
BLAST of CmoCh04G025900 vs. TAIR 10
Match: AT1G34160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 702.6 bits (1812), Expect = 2.6e-202
Identity = 354/582 (60.82%), Postives = 433/582 (74.40%), Query Frame = 0 

Query: 3   YFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIH 62
           Y + ++QKC SFSQIKQLQ++ +T GHF  S  R++LLE CAISPFGDLS A+ IFR+I 
Sbjct: 5   YMETMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIP 64

Query: 63  SPSTKDWNAVIRGTALSSNPSNAIFWYRTM----TASNGPHRVDALTCSFALKACARALA 122
            P T DWNA+IRG A SS+PS A  WYR+M    ++S+   RVDALTCSF LKACARAL 
Sbjct: 65  KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124

Query: 123 RSEVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAG 182
            S + QLH Q+ R G  AD LL TTLLDAY+K  DL  A K+FDEMP  D+ASWN+LIAG
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184

Query: 183 FAQGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDT 242
              G R S+A++L+KRM+ +G +R +EVTV  AL ACS LG +KEGEN+    + +N   
Sbjct: 185 LVSGNRASEAMELYKRMETEG-IRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN--- 244

Query: 243 VVQVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL 302
            V V N  IDMY+KCG VDKAY VFE    +KS++TWNTMI  FA+HG+ H+AL++F+KL
Sbjct: 245 -VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 304

Query: 303 GRSGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRL 362
             +GI PD +SYLA L AC HAGL+E GL +FN+M  +GV  N+KHYG VVDLL RAGRL
Sbjct: 305 EDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRL 364

Query: 363 KEAYEIVSSMP-FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVY 422
           +EA++I+ SM   P+ VLWQ+LLGA   Y DV+MAE+ASR++ EMG  + GDFVLLSNVY
Sbjct: 365 REAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVY 424

Query: 423 AARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIM 482
           AA+ RW DVGRVRD M  + VKK PG SYIE KG +H+F   D+SH   REIY K+DEI 
Sbjct: 425 AAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIR 484

Query: 483 FRIKAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSC---TEEGTPIQVIKNLR 542
           F+I+  GY A+TG VLHDI EE+KEN LCYHSEKLAVA+GL      +E +P++VI NLR
Sbjct: 485 FKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLR 544

Query: 543 ICGDCHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           ICGDCHVV K ISK Y REI VRDR RFHRFKDG CSC+D+W
Sbjct: 545 ICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581

[Close]
BLAST of CmoCh04G025900 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 465.3 bits (1196), Expect = 7.1e-131
Identity = 238/571 (41.68%), Postives = 362/571 (63.40%), Query Frame = 0 

Query: 12  SSFSQIKQLQANLITNGHFHFSSSRTK--LLELCAISPFGDLSHALHIFRHIHSP-STKD 71
           SS ++++Q+ A  I +G     +   K  +  L ++     +S+A  +F  I  P +   
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 72  WNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARSEVMQLHSQ 131
           WN +IRG A   N  +A   YR M  S G    D  T  F +KA            +HS 
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVS-GLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147

Query: 132 VLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRPSDA 191
           V+R GF + + +Q +LL  YA   D+  A KVFD+MPE D+ +WNS+I GFA+ G+P +A
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 207

Query: 192 IDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVVQVCNVVID 251
           + L+  M   G ++P+  T+   LSAC+++G L  G+ V  Y+ +  L   +   NV++D
Sbjct: 208 LALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 267

Query: 252 MYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL-GRSGIYPDA 311
           +YA+CG V++A  +F+ M  +K+ ++W ++I+  A++G G +A++LF+ +    G+ P  
Sbjct: 268 LYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 327

Query: 312 ISYLAVLCACNHAGLIEDGLKLFNSMVQR-GVAPNIKHYGVVVDLLGRAGRLKEAYEIVS 371
           I+++ +L AC+H G++++G + F  M +   + P I+H+G +VDLL RAG++K+AYE + 
Sbjct: 328 ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIK 387

Query: 372 SMPF-PNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRWDD 431
           SMP  PN+V+W+TLLGAC  +GD  +AE A  +++++     GD+VLLSN+YA+ +RW D
Sbjct: 388 SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 447

Query: 432 VGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAIGY 491
           V ++R  M R  VKK PG S +EV   +H+FL GD+SH     IYAKL E+  R+++ GY
Sbjct: 448 VQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 507

Query: 492 TAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVVIKL 551
             +  NV  D+EEE+KEN + YHSEK+A+AF L  T E +PI V+KNLR+C DCH+ IKL
Sbjct: 508 VPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKL 567

Query: 552 ISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           +SK YNREI VRDR+RFH FK+G CSC+DYW
Sbjct: 568 VSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]
BLAST of CmoCh04G025900 vs. TAIR 10
Match: AT3G56550.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 452.2 bits (1162), Expect = 6.2e-127
Identity = 226/574 (39.37%), Postives = 359/574 (62.54%), Query Frame = 0 

Query: 7   LLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIHS-PS 66
           +LQ C+S  +++++ +++I NG  H  S    LL  CA+S  G LSHA  +F H  S PS
Sbjct: 11  MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70

Query: 67  TKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARSEVMQL 126
           T DWN +IRG + SS+P N+I +Y  M  S+   R D  T +FALK+C R  +  + +++
Sbjct: 71  TSDWNYLIRGFSNSSSPLNSILFYNRMLLSS-VSRPDLFTFNFALKSCERIKSIPKCLEI 130

Query: 127 HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRP 186
           H  V+R GF  D ++ T+L+  Y+    ++ A KVFDEMP  D+ SWN +I  F+  G  
Sbjct: 131 HGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLH 190

Query: 187 SDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVVQVCNV 246
           + A+ ++KRM  +G +  +  T+   LS+C+ +  L  G  + +   +   ++ V V N 
Sbjct: 191 NQALSMYKRMGNEG-VCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 250

Query: 247 VIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIYP 306
           +IDMYAKCGS++ A  VF  MR ++ ++TWN+MI+ + +HG G +A+  F K+  SG+ P
Sbjct: 251 LIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 310

Query: 307 DAISYLAVLCACNHAGLIEDGLKLFNSM-VQRGVAPNIKHYGVVVDLLGRAGRLKEAYEI 366
           +AI++L +L  C+H GL+++G++ F  M  Q  + PN+KHYG +VDL GRAG+L+ + E+
Sbjct: 311 NAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 370

Query: 367 V-SSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRW 426
           + +S    + VLW+TLLG+C+ + ++++ E+A +KLV++   + GD+VL++++Y+A    
Sbjct: 371 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDA 430

Query: 427 DDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAI 486
                +R  +R  D++  PG+S+IE+   +HKF+  D+ H     IY++L E++ R    
Sbjct: 431 QAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILA 490

Query: 487 GYTAETGN-VLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVV 546
           GY  E  N     + +    +    HSEKLA+A+GL  T  GT +++ KNLR+C DCH  
Sbjct: 491 GYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSF 550

Query: 547 IKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
            K +SK++NREI VRDR RFH F DG+CSC DYW
Sbjct: 551 TKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581

[Close]
BLAST of CmoCh04G025900 vs. TAIR 10
Match: AT4G21065.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 444.9 bits (1143), Expect = 9.9e-125
Identity = 207/455 (45.49%), Postives = 314/455 (69.01%), Query Frame = 0 

Query: 125 LHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGR 184
           +HS V+R GF + + +Q +LL  YA   D+  A KVFD+MPE D+ +WNS+I GFA+ G+
Sbjct: 10  IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69

Query: 185 PSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVVQVCN 244
           P +A+ L+  M   G ++P+  T+   LSAC+++G L  G+ V  Y+ +  L   +   N
Sbjct: 70  PEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 129

Query: 245 VVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL-GRSGI 304
           V++D+YA+CG V++A  +F+ M  +K+ ++W ++I+  A++G G +A++LF+ +    G+
Sbjct: 130 VLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 189

Query: 305 YPDAISYLAVLCACNHAGLIEDGLKLFNSMVQR-GVAPNIKHYGVVVDLLGRAGRLKEAY 364
            P  I+++ +L AC+H G++++G + F  M +   + P I+H+G +VDLL RAG++K+AY
Sbjct: 190 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 249

Query: 365 EIVSSMPF-PNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARR 424
           E + SMP  PN+V+W+TLLGAC  +GD  +AE A  +++++     GD+VLLSN+YA+ +
Sbjct: 250 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 309

Query: 425 RWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIK 484
           RW DV ++R  M R  VKK PG S +EV   +H+FL GD+SH     IYAKL E+  R++
Sbjct: 310 RWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 369

Query: 485 AIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHV 544
           + GY  +  NV  D+EEE+KEN + YHSEK+A+AF L  T E +PI V+KNLR+C DCH+
Sbjct: 370 SEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHL 429

Query: 545 VIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
            IKL+SK YNREI VRDR+RFH FK+G CSC+DYW
Sbjct: 430 AIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462

[Close]
BLAST of CmoCh04G025900 vs. TAIR 10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 440.3 bits (1131), Expect = 2.4e-123
Identity = 230/575 (40.00%), Postives = 351/575 (61.04%), Query Frame = 0 

Query: 6   LLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPF-GDLSHALHIFRHIHSP 65
           LL+ KC+S  ++ Q+QA  I   H    S   KL+  C  SP    +S+A H+F  +  P
Sbjct: 34  LLISKCNSLRELMQIQAYAI-KSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 93

Query: 66  STKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARSEVMQ 125
               +N++ RG +  +NP   +F        +G    D  T    LKACA A A  E  Q
Sbjct: 94  DIVIFNSMARGYSRFTNPLE-VFSLFVEILEDG-ILPDNYTFPSLLKACAVAKALEEGRQ 153

Query: 126 LHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGR 185
           LH   ++ G D +V +  TL++ Y + ED+D A+ VFD + EP +  +N++I G+A+  R
Sbjct: 154 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 213

Query: 186 PSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVVQVCN 245
           P++A+ LF+ M +   L+PNE+T+   LS+C+ LG+L  G+ + KY  + +    V+V  
Sbjct: 214 PNEALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNT 273

Query: 246 VVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIY 305
            +IDM+AKCGS+D A  +FE MR  K    W+ MI+A+A HG   K++ +FE++    + 
Sbjct: 274 ALIDMFAKCGSLDDAVSIFEKMR-YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 333

Query: 306 PDAISYLAVLCACNHAGLIEDGLKLFNSMVQR-GVAPNIKHYGVVVDLLGRAGRLKEAYE 365
           PD I++L +L AC+H G +E+G K F+ MV + G+ P+IKHYG +VDLL RAG L++AYE
Sbjct: 334 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE 393

Query: 366 IVSSMPF-PNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRR 425
            +  +P  P  +LW+ LL AC ++ ++ +AE  S ++ E+     GD+V+LSN+YA  ++
Sbjct: 394 FIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKK 453

Query: 426 WDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKA 485
           W+ V  +R  M+ R   K PG S IEV   +H+F  GD   S+  +++  LDE++  +K 
Sbjct: 454 WEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 513

Query: 486 IGYTAETGNVLH-DIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHV 545
            GY  +T  V+H ++ +++KE  L YHSEKLA+ FGL  T  GT I+V+KNLR+C DCH 
Sbjct: 514 SGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHN 573

Query: 546 VIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
             KLIS  + R++ +RD  RFH F+DG CSC D+W
Sbjct: 574 AAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603

The following BLAST results are available for this feature:
BLAST of CmoCh04G025900 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FX243.7e-20160.82Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana OX... [more]
B8YEK41.4e-16852.83Pentatricopeptide repeat-containing protein OGR1, mitochondrial OS=Oryza sativa ... [more]
A8MQA31.0e-12941.68Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
Q9LXY58.7e-12639.37Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX... [more]
Q8LK933.4e-12240.00Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... [more]
BLAST of CmoCh04G025900 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H8R50.0e+00100.00pentatricopeptide repeat-containing protein At1g34160 OS=Cucurbita moschata OX=3... [more]
A0A6J1JI910.0e+0098.09pentatricopeptide repeat-containing protein At1g34160 isoform X1 OS=Cucurbita ma... [more]
A0A0A0KB771.1e-29986.63DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G0526... [more]
A0A6J1BW139.9e-29886.46pentatricopeptide repeat-containing protein At1g34160 OS=Momordica charantia OX=... [more]
A0A1S3C3U74.6e-29584.90pentatricopeptide repeat-containing protein At1g34160 OS=Cucumis melo OX=3656 GN... [more]
BLAST of CmoCh04G025900 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960919.10.0e+00100.00pentatricopeptide repeat-containing protein At1g34160 [Cucurbita moschata] >XP_0... [more]
KAG6602212.10.0e+0099.65Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023526446.10.0e+0099.31pentatricopeptide repeat-containing protein At1g34160 isoform X1 [Cucurbita pepo... [more]
KAG7032894.10.0e+0099.13Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022990287.10.0e+0098.09pentatricopeptide repeat-containing protein At1g34160 isoform X1 [Cucurbita maxi... [more]
BLAST of CmoCh04G025900 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G34160.12.6e-20260.82Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G21065.17.1e-13141.68Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G56550.16.2e-12739.37Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G21065.29.9e-12545.49Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G02980.12.4e-12340.00Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 243..268
e-value: 1.5E-4
score: 21.8
coord: 142..166
e-value: 0.0019
score: 18.3
coord: 345..368
e-value: 0.29
score: 11.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 271..317
e-value: 1.2E-8
score: 35.0
coord: 167..215
e-value: 1.7E-9
score: 37.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 308..342
e-value: 3.9E-6
score: 24.7
coord: 242..269
e-value: 0.0021
score: 16.1
coord: 171..204
e-value: 8.3E-8
score: 29.9
coord: 273..307
e-value: 2.1E-7
score: 28.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 168..202
score: 11.673842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 271..305
score: 11.180584
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 306..340
score: 10.840783
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 442..566
e-value: 1.5E-39
score: 134.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 166..233
e-value: 6.1E-10
score: 40.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 6..165
e-value: 1.1E-16
score: 63.2
coord: 234..326
e-value: 1.8E-21
score: 78.9
coord: 327..455
e-value: 6.5E-17
score: 63.9
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 2..569
NoneNo IPR availablePANTHERPTHR47924:SF41BNAC07G48870D PROTEINcoord: 2..569

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G025900.1CmoCh04G025900.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0080156 mitochondrial mRNA modification
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding