CmoCh04G025680 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCACTCTCTCTTCAACTTCTCACGCTCTCAGTCGCCATCTTCCTTTTTCCTCTGACCCAACAGACGCGCACACACACAGACCAAAATCATAATCGAAAACCCAAAAGCCTCGCCGCTCTCAAATCCCAATCTGGACACCCCGAAATTCCTCGCGAAAATCTTGTTGTGTTGTGTTACTTGAAAGATTCCCATTGATTTTCGAGAGAATCTTCGCGAATTCCTTGCCTATTTTAGAGGACAAAAATGGCATCATCCAAGCTCTGGGCATCTTCCGGTTCGCGAAATTCGGATCTATCTCGAGGTTCTTCTTCTTCTTCCTCTTCTGCTTCTCTTTTAAACCCTCAATTTCTCTCCAATAGTTCCAGGAATAATGACAACAATCGGACTCGCAATCGAAGCCATAGTCTTAGCTCGATGAATCTCGATGGCTTAGTTCGTGATGGGTATGATTCTAATCCCACGGAGTCTATTCTCTTAGATGCGCAGATCACTCTTGTTGATTCCCCTATCCCCTCTACGTTTCCCATGAATACGACTAATTCCTCTGCCGTCATTGATAGTTATCACAATACTTCCTCCGGCGCGCCCAAGACTGTGGATGATGTGTGGAGGGAGATTGTATCGGGTGAGAGGAAGGAGTTGAAGGAGGAGGTTACTGATGAGTTGATAACCCTCGAGGATTTTCTTGTGAAAACTGGAGCTGCGCCTGTTGAGGATGTCAAATTGCCGCAGACGGAGAGGCTGAGTGGAGGGATTTTTTCGTTTGATTCAATTCCAGGCAGCTCGTTTCAGGCAGTGGAAAAGGTCGAAGGATCCATTGTGGGATTTGGAAGTGGGGTCGATTTGGTTGGCAGTGGAGGAAGTGTGGGGAGAGGGAAAAGAGGGCGAGCTGCCTTGGAGCCCTTGGATAAGGCTGCTGAGCAAAGACAGAGGAGGATGATCAAGAATAGGGAGTCTGCTGCAAGGTCTAGGGAAAGGAAGCAGGTGACTGAATGTGCTCTTTATAAACAAAAGGAACTTTCAGCTTTGATTCTTGTTTGAAATGTATTTGATGGTATACTTTTGCTGTTTGGTTTTTCGATCTCAGGCTTATCAAGTGGAATTAGAGTCGTTAGTAGCAAAATTAGAGGAGGAGAACGAGCGGCTTTTGAGAGAAAAGGTACTTTTATTTTCGATATCAGACATATGAGAACGTCTTTTTTATTCAATTTTCTGTTCCACTGGATTTGGGATCTATTTGCTATTGCTTGCATTTGCCTGTCGGAGAAAGTTGCTTAAGAGTTCGTAAAGTTTTTTGAGAATCTCAAAGTGGGATTCGAATCCAGGACGCGTCAGAGATTGCTTTTCTTCTTATGGAAGCTACAAGCTATCATTATATTGATATATTGGAGCCTGAACTTTTCTCCTTCCGTTTGATCCTTCAGACCTCCCTGAGTCTCTCTTTTATGAAAACCCATTCTAATTCCCTGTTTTTTAGTTCCCAACGAACTAGTATAAATTTGAGTACATTGGGCTACATCGAATATGTAATGTCCCACATTGGTTGGGGAGGAGAACAAAACACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCATATGCGTTTTAAAGCCTTGAGGGGAATCTCGAAAGGGAAAGCCCAAAGAAGACAATATTTGCTAGCGGTGGATCTGGATCGTTACAGAATATTTTATTTTATGTTAATCTTATGTTGTATATCTTAGATCTTGAGCAGTATCTTTACTGATGTGCATACTGGATAATCATTTGTCTGATTAGAATAAATGGTGGATATATTTGATAGTTGGTGAATAGGAGCTTAAAGTTATTGACTAAAAGAGACTGCAGGGCACCAAGAAACAGTTAAAGCTGTTGGTATTTCTGATTATAGAAGGATCCTGAAGAACACAAATAATTCTTTTTTACTAGACAAAATACTATGCGTAGGAAAAGGGAGAGAATAATGGTTGTGGATCCATTTGTGTTATTTAGAAAACAATAATGAAAGAAATATTCTATAATATGTGCTGTTATTTCAAAGATCTAGAAGACTGGAAATAATCCATTTCTGAATGGAGAGACTTAGATGAGTAGGATCCAACTTAGTATAATTCTGCTTTTGACAAATCTAGGTTTATTCTTTGTGTAGTGTAGGCTAGAGTTGGGAAGTTGGATTTGCAGAGTCTGTATTTTGGTTGTTCAAGTGATTGGTTACTTAAACTTTGGGTTTAGCGTTGCATTTGTTTGGTTGATAGGTTTGTAATTTGTGGAAGTAAGTGTGTACGTTGTAGAAAAGTTCCAGGTTTATGCCTGTGAGATTTGCAAGCTCTAATCAAAGTTTAATAAGTCTACTATGTGATCCAACATCGGTCGAGGAGGAGAATGAAACATTCATTATAGGTGTGTGGAAATCTCTCCTTAGCAGACGCATTTTAAAACCTTGAGGGAAAACCCGAAAGGGAAAGCGCAGAAAAAACTGTTACAGGAACGAATGTTCAACTTTACATGTTAGAGCTACCCGAAATTTAGTTTGATGGTCGACAAAAACATATTGTATTTGAAAAAAGGGAACCTCTCTCATGGCCATGGATTTGTTGTAGCTATGTAAACAGAGGACTGTTGTCTGTTCTGCAATTTTGTTGGTTACATTTTAGCACTTAAAAAATTCATCTCTTTTGCAGGCCGAGAGGAGCAAGGAAAGGCATAAGCAGGTATTGATTTCTAACTTTGATGCTACCATTGCTGTGTTATGAAAGAGGTTTTGCTTTGACTATTATCTTTCAGCTCTCTTGTGCTGTCTCTCTTGTTTTCCTTTTAAAAGGAATAGCACGGTGAATTTCTTCTAAAATCTAGCTGTTTTGTTTAAACAGTTGCAGTGAATTTTCTTGCTCCATGTTGATAAGAAATCTTTGATTTGCATTTGAATTTCATCAACCTAATTTGAAGTATTTTTTTTCGCTGTTAGCGAGGGCCATCGTTAATTGTAGTATTTGCGTTCCTCTTGGCTTGTCTGCGAGCAATTGAAAGTTCATCAAATATCGGATTATCGAATATTTTATTGCATCAGTGATCACCATCATCGAAACATTCTGTGGATAACCTCTGTCGTTTAGCCTCTTTCAGAACTTTGTCTTGAAAGAACTTTATGGTACATTATACCATTGGAAACTAGAAAGCAGCAATTTCTTTAGCTACAAGTCTTGATTGATTATTCCCAAAAGAAAAAAAGAAAACCGTTTGTGAGATCACACGTCCACCAGAGAGTGGAACAAAACATTTCTTAAGGGTATAAAAATCTCTCCTTAGTAGAGGCGAAAGAGAACAATATTTGCTAGTGGTGAATTTGAGCGGTTACAAATGGTATATCAGTATGTAGCTTTTTACCTACATACGTTCCTTTATTTATAATTTGCAAAGTAAGACTGGTTTCCCTCTAAGCAGAATATTGAAGATGTATGTTTTCGAACTTAACGAGTTTTGAGCCCAATCATCCATGTTGTTGATGAAATATGACAGACTGGTGACCTCAGTTTTCATTCTATAATGACATGTTAAACTTGAACTACATGGCAGTGTTTACATGTAATGATACTGCTGGTTTGATATTTTCCTGGTACAGCTAATGGAAAAGGTGATTCCTGTGGTTGAAAAGCGACGACCCCCACGAGGGATTCGGCGAGTGAATTCCATGAAATGGTGAATGGTGAACTACTTATCTTCCACGAGACGCATTCAATAGAGCAGAAGAGATGGACATAGGATTGACATCACTGAGACCATATTCTTTGCTGGTAATCGCTCACACCAGTGATCACAATCCATCCATGAAGATTGACAGGGAATGACAAAACTAAAGCAGGATACATGAAAGATGTAAAGGTAGATATTTAGAATAAAGTCGATTAGAGCAAATAAAAGTAGAAACTTTGAGGTGCTCAACTGTCCGTCTCACAATTTTTTATGTATGAGAGTAAATATAGGGAGTTGGGTTGAGTTGATTAACTTGTTGACAAGACTAGAAGTGTTCTAAAAAAAAGTCTCCTCTGTGTAGGAAGTATTGTGCTAAATTATAACTTACGAAGACTACATTTTAATCTCAAA TCTCACTCTCTCTTCAACTTCTCACGCTCTCAGTCGCCATCTTCCTTTTTCCTCTGACCCAACAGACGCGCACACACACAGACCAAAATCATAATCGAAAACCCAAAAGCCTCGCCGCTCTCAAATCCCAATCTGGACACCCCGAAATTCCTCGCGAAAATCTTGTTGTGTTGTGTTACTTGAAAGATTCCCATTGATTTTCGAGAGAATCTTCGCGAATTCCTTGCCTATTTTAGAGGACAAAAATGGCATCATCCAAGCTCTGGGCATCTTCCGGTTCGCGAAATTCGGATCTATCTCGAGGTTCTTCTTCTTCTTCCTCTTCTGCTTCTCTTTTAAACCCTCAATTTCTCTCCAATAGTTCCAGGAATAATGACAACAATCGGACTCGCAATCGAAGCCATAGTCTTAGCTCGATGAATCTCGATGGCTTAGTTCGTGATGGGTATGATTCTAATCCCACGGAGTCTATTCTCTTAGATGCGCAGATCACTCTTGTTGATTCCCCTATCCCCTCTACGTTTCCCATGAATACGACTAATTCCTCTGCCGTCATTGATAGTTATCACAATACTTCCTCCGGCGCGCCCAAGACTGTGGATGATGTGTGGAGGGAGATTGTATCGGGTGAGAGGAAGGAGTTGAAGGAGGAGGTTACTGATGAGTTGATAACCCTCGAGGATTTTCTTGTGAAAACTGGAGCTGCGCCTGTTGAGGATGTCAAATTGCCGCAGACGGAGAGGCTGAGTGGAGGGATTTTTTCGTTTGATTCAATTCCAGGCAGCTCGTTTCAGGCAGTGGAAAAGGTCGAAGGATCCATTGTGGGATTTGGAAGTGGGGTCGATTTGGTTGGCAGTGGAGGAAGTGTGGGGAGAGGGAAAAGAGGGCGAGCTGCCTTGGAGCCCTTGGATAAGGCTGCTGAGCAAAGACAGAGGAGGATGATCAAGAATAGGGAGTCTGCTGCAAGGTCTAGGGAAAGGAAGCAGGCTTATCAAGTGGAATTAGAGTCGTTAGTAGCAAAATTAGAGGAGGAGAACGAGCGGCTTTTGAGAGAAAAGGCCGAGAGGAGCAAGGAAAGGCATAAGCAGCTAATGGAAAAGGTGATTCCTGTGGTTGAAAAGCGACGACCCCCACGAGGGATTCGGCGAGTGAATTCCATGAAATGGTGAATGGTGAACTACTTATCTTCCACGAGACGCATTCAATAGAGCAGAAGAGATGGACATAGGATTGACATCACTGAGACCATATTCTTTGCTGGTAATCGCTCACACCAGTGATCACAATCCATCCATGAAGATTGACAGGGAATGACAAAACTAAAGCAGGATACATGAAAGATGTAAAGGTAGATATTTAGAATAAAGTCGATTAGAGCAAATAAAAGTAGAAACTTTGAGGTGCTCAACTGTCCGTCTCACAATTTTTTATGTATGAGAGTAAATATAGGGAGTTGGGTTGAGTTGATTAACTTGTTGACAAGACTAGAAGTGTTCTAAAAAAAAGTCTCCTCTGTGTAGGAAGTATTGTGCTAAATTATAACTTACGAAGACTACATTTTAATCTCAAA ATGGCATCATCCAAGCTCTGGGCATCTTCCGGTTCGCGAAATTCGGATCTATCTCGAGGTTCTTCTTCTTCTTCCTCTTCTGCTTCTCTTTTAAACCCTCAATTTCTCTCCAATAGTTCCAGGAATAATGACAACAATCGGACTCGCAATCGAAGCCATAGTCTTAGCTCGATGAATCTCGATGGCTTAGTTCGTGATGGGTATGATTCTAATCCCACGGAGTCTATTCTCTTAGATGCGCAGATCACTCTTGTTGATTCCCCTATCCCCTCTACGTTTCCCATGAATACGACTAATTCCTCTGCCGTCATTGATAGTTATCACAATACTTCCTCCGGCGCGCCCAAGACTGTGGATGATGTGTGGAGGGAGATTGTATCGGGTGAGAGGAAGGAGTTGAAGGAGGAGGTTACTGATGAGTTGATAACCCTCGAGGATTTTCTTGTGAAAACTGGAGCTGCGCCTGTTGAGGATGTCAAATTGCCGCAGACGGAGAGGCTGAGTGGAGGGATTTTTTCGTTTGATTCAATTCCAGGCAGCTCGTTTCAGGCAGTGGAAAAGGTCGAAGGATCCATTGTGGGATTTGGAAGTGGGGTCGATTTGGTTGGCAGTGGAGGAAGTGTGGGGAGAGGGAAAAGAGGGCGAGCTGCCTTGGAGCCCTTGGATAAGGCTGCTGAGCAAAGACAGAGGAGGATGATCAAGAATAGGGAGTCTGCTGCAAGGTCTAGGGAAAGGAAGCAGGCTTATCAAGTGGAATTAGAGTCGTTAGTAGCAAAATTAGAGGAGGAGAACGAGCGGCTTTTGAGAGAAAAGGCCGAGAGGAGCAAGGAAAGGCATAAGCAGCTAATGGAAAAGGTGATTCCTGTGGTTGAAAAGCGACGACCCCCACGAGGGATTCGGCGAGTGAATTCCATGAAATGGTGA MASSKLWASSGSRNSDLSRGSSSSSSSASLLNPQFLSNSSRNNDNNRTRNRSHSLSSMNLDGLVRDGYDSNPTESILLDAQITLVDSPIPSTFPMNTTNSSAVIDSYHNTSSGAPKTVDDVWREIVSGERKELKEEVTDELITLEDFLVKTGAAPVEDVKLPQTERLSGGIFSFDSIPGSSFQAVEKVEGSIVGFGSGVDLVGSGGSVGRGKRGRAALEPLDKAAEQRQRRMIKNRESAARSRERKQAYQVELESLVAKLEEENERLLREKAERSKERHKQLMEKVIPVVEKRRPPRGIRRVNSMKW Homology
BLAST of CmoCh04G025680 vs. ExPASy Swiss-Prot
Match: P42777 (G-box-binding factor 4 OS=Arabidopsis thaliana OX=3702 GN=GBF4 PE=1 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.0e-40 Identity = 150/319 (47.02%), Postives = 193/319 (60.50%), Query Frame = 0
BLAST of CmoCh04G025680 vs. ExPASy Swiss-Prot
Match: Q0JHF1 (bZIP transcription factor 12 OS=Oryza sativa subsp. japonica OX=39947 GN=BZIP12 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 8.7e-24 Identity = 92/276 (33.33%), Postives = 138/276 (50.00%), Query Frame = 0
BLAST of CmoCh04G025680 vs. ExPASy Swiss-Prot
Match: Q9C5Q2 (ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=DPBF4 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.9e-10 Identity = 73/198 (36.87%), Postives = 97/198 (48.99%), Query Frame = 0
BLAST of CmoCh04G025680 vs. ExPASy Swiss-Prot
Match: Q9LES3 (ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=DPBF3 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.9e-09 Identity = 96/329 (29.18%), Postives = 142/329 (43.16%), Query Frame = 0
BLAST of CmoCh04G025680 vs. ExPASy Swiss-Prot
Match: Q9M7Q4 (ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=ABF2 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.0e-08 Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 0
BLAST of CmoCh04G025680 vs. ExPASy TrEMBL
Match: A0A6J1HH29 (G-box-binding factor 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463986 PE=4 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 7.2e-154 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
BLAST of CmoCh04G025680 vs. ExPASy TrEMBL
Match: A0A6J1JIN2 (G-box-binding factor 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487283 PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 6.7e-152 Identity = 304/307 (99.02%), Postives = 304/307 (99.02%), Query Frame = 0
BLAST of CmoCh04G025680 vs. ExPASy TrEMBL
Match: A0A6J1HIZ4 (G-box-binding factor 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463986 PE=4 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 1.8e-133 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of CmoCh04G025680 vs. ExPASy TrEMBL
Match: A0A6J1JT80 (G-box-binding factor 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487283 PE=4 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.7e-131 Identity = 268/271 (98.89%), Postives = 268/271 (98.89%), Query Frame = 0
BLAST of CmoCh04G025680 vs. ExPASy TrEMBL
Match: A0A6J1HH41 (G-box-binding factor 4-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111463986 PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 2.8e-126 Identity = 268/307 (87.30%), Postives = 268/307 (87.30%), Query Frame = 0
BLAST of CmoCh04G025680 vs. NCBI nr
Match: XP_022963796.1 (G-box-binding factor 4-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 553.1 bits (1424), Expect = 1.5e-153 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
BLAST of CmoCh04G025680 vs. NCBI nr
Match: XP_022990417.1 (G-box-binding factor 4-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 546.6 bits (1407), Expect = 1.4e-151 Identity = 304/307 (99.02%), Postives = 304/307 (99.02%), Query Frame = 0
BLAST of CmoCh04G025680 vs. NCBI nr
Match: XP_023528083.1 (G-box-binding factor 4-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 545.4 bits (1404), Expect = 3.1e-151 Identity = 303/307 (98.70%), Postives = 304/307 (99.02%), Query Frame = 0
BLAST of CmoCh04G025680 vs. NCBI nr
Match: XP_022963803.1 (G-box-binding factor 4-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 485.3 bits (1248), Expect = 3.8e-133 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of CmoCh04G025680 vs. NCBI nr
Match: KAG7032871.1 (G-box-binding factor 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 483.0 bits (1242), Expect = 1.9e-132 Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 0
BLAST of CmoCh04G025680 vs. TAIR 10
Match: AT5G44080.1 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 227.6 bits (579), Expect = 1.3e-59 Identity = 163/325 (50.15%), Postives = 219/325 (67.38%), Query Frame = 0
BLAST of CmoCh04G025680 vs. TAIR 10
Match: AT1G03970.1 (G-box binding factor 4 ) HSP 1 Score: 168.7 bits (426), Expect = 7.3e-42 Identity = 150/319 (47.02%), Postives = 193/319 (60.50%), Query Frame = 0
BLAST of CmoCh04G025680 vs. TAIR 10
Match: AT2G41070.1 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 68.2 bits (165), Expect = 1.3e-11 Identity = 73/198 (36.87%), Postives = 97/198 (48.99%), Query Frame = 0
BLAST of CmoCh04G025680 vs. TAIR 10
Match: AT2G41070.3 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 68.2 bits (165), Expect = 1.3e-11 Identity = 73/198 (36.87%), Postives = 97/198 (48.99%), Query Frame = 0
BLAST of CmoCh04G025680 vs. TAIR 10
Match: AT2G41070.2 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 68.2 bits (165), Expect = 1.3e-11 Identity = 73/198 (36.87%), Postives = 97/198 (48.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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