CmoCh04G025440 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G025440
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionGlycolipid transfer protein 3-like
LocationCmo_Chr04: 18673301 .. 18676346 (-)
RNA-Seq ExpressionCmoCh04G025440
SyntenyCmoCh04G025440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGAACATGTGTGTGTGTGTGTGTGTTTATGCCTCTACTGATGATACTAAGTGGTGGTGGGTTGAAATGCAGAGGTTGGAGAGTGTGTATGAGTCTGATCCTTTGTTGTATTCGAATATGGTGGAAGTTTTGAAGAAAGAGATGAATGATGGAATTGCTAGGAACCTCACCAGTTGTAGCAGAGCCTTTCTTTGGCTTACAAGGTAGCTACTTGTGTTCATTCATCAGATTGTTGGTTGCTTCCTTGACTTCTGCTAACTGCTTGTGATGCAAATTGTTAGTTCCTAAGCTTTTGTTGTGTTCTGTGTGGTTGAGAAAAAATCTATTTCTGTAACGCCCTAAGTCTACCTCGAGCAGATATGGTCCTTTTTGGATTTTCCCTTGCTTTCACACCCTTATAAAAAGTGTTTCGTTCTCCTCCTTAGCTGATGCAGGGTCTCACAATATCCACCCTCTTCAGGGACCAACATCCTCCCCAACTGATGTGGGATCTCATAATATCTACCTCCTTCGGGGACCAACGTCCTCGTGGGCACTGTTTCCTTTTTTTCGATCGTGCTTTGTTCTCCTCTCCGACCGATGTGGGGTCTCACAATATCCACCCTCTTCGGGGACCAGCGTCCTCCCGAACTGATGTGGGATCTCACAATATCTACCTCTTTCGGGGACCAGCGTCCCCGCTAGCACTCGTTCCTTTCTCCAATCGATGTGGGGTTCTCTTTGGACTTCCCCTCAAAGTTTTAAAAACGTATCTACTAGAGAGAGGTTTTCACACCCTTATAAAAAGTGCTCTGTTCTCCTCCCCAACCAATATGAGATCTCATAATATCCACTCCCTTTGGAGCCTAACGTCTTCGCTGACACTCGTTCCCTTCTCCAATCGAAGTGGGTTCTCTTTAGACTTTTCCTTTCAGGTTTTCCCTCAAAGTTTTTAAAACACGTCTGGTAAGGAGAGATTTTCACACTCTTGTAAAGAATGTTTCGTTCTTCTCCCTAACTGATGTGGGATTTCACCGTTTCCTTGCCTCTTTTACGTGGAGTTGTTGATTAGGAGTTTTATGGAGCTATACTTCGATATAGGTCCCTGGATTTTACAGTGGCGTTACTAGAGAAGTCAAGAGAAGAACCTAGGCTGAGCATGGAGCAAGCAGTAGAGGATGCTTACAACCTTACTCTGAAGCCATGGCATGGATGGATTTCATCTGCTGCTGTCAAAGTATTGTCTCTTTTGCTTTTCTTTGCCATCATGGTACTTTTGTATAAACCAAAAACCTATGGTTCTTGTAGATAGCTCTGAAACTTGTGCCCGACAGTGAAAGGTTTGATCGTCTCCTAACAGCCAACGACGAACGAAACGACACCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAGCTCTCACCTTTTCTAGAACACATCCATTCTATTCTGGTAAACCCAAGTATTCCTTTCAGCACTATAATCAATTTCATGACAGTTAACCAACCGAGAGTGTTCTTATGTGTCTTTTCCCAGAGACTGTACAGGTTAGATCGATTAAAGTCTGCCTAGAGAAGAAGTAATGGACAAAGGAATGAAGAATGGATCCTGAAGTTCTGACATTTTCTTGTAAATACACTGCCATACGTGTCACGGAAAAGTTTCCCTCTTTTTCAGATCTCACGTCAGTTGGGCGAAGCATTCTTTAAAAGGGGGTAAAAATCTCTCCCTAGCAGACACGTTTTAAAATCGTGAGGCTGACGGCAATACGTAACTAACCAAAGCAGACAATATCAGCTAGCGGTGACCTTAGACTGTTACATATTGTATTCATACACTTCTAATCTAAGTTTTCTTACACATGTAATGGTTAGGCTTGTAATGTAAGTAATCGAGTTTCTAGGCCTTACGTCGAATCTCTAATCTTCGATCGTGCTGTTTAGTCAATGGCAACAAAACAATTACCTCATAAAGATATGCTTCCTTTCTGCTTATTGTTCCAATCCCTTAATATATAGCTGACAGATGCTCAATCTGTTCCTAGTCCATCCAGAATAAACTAATATGTGAGGAAAAGTAGATATCAGTTCTAAGTTTTCAGTCAAAATGTATCATTCTTTCAACCTGAAGCTTCCTCATCTTCAATGGCTGCAGTTAACTTGATGGCCACTTTCACGATTCTGATGTTCTCCTGCAATTGTTTCATCATAAGTCCTGACACAATAATAATGTTAAAGAGTTAAAATATAAGGGATGAACTCAGTTTTCTTCCGGTTAATGCAAAATTTACCATTGTAAGATCATTGACACGCATCTCAATTTACCATTGTCAGCCAACAATTACCACGAACATCACTGACATTCAGCTTCACATTTCTAGTCGGTACCTCATTTCAATTATGTTTATACAATCCAAAAATGCCAGAAAAATAAAACAGAATAAACCTGAGATCGAAACAACAGCAAAAATTATGGTAAGTTCGCTGTTCTTGATTAGTGTATAAACAATATAGTTAACGAAGAGTTGCATGGAGGGGAAATCAGCGGTATTAACATCCCCCCCTACAATTGTTCAGTGGAAAGAGAAGAGTTTACTTAGATTTATAGCTCAAAGTCACCAGGTTTTCCCTACAGATGATAGAATCCAAAACCATCGTTTATTCCTTTCGTGTTTTCTCCTGTATCTGTGGCTAATTGGATGGGTTTAAGGTAACGGGTTAGCTCTACAAGGGACCAAGACTGGTACTTTTTGCCAGTTAATGTCCCCGCCATTGACATGTCTATTCTAAGCTAAGAATATCAGCATGGTTAAAAATCATGCCAACATATGAGTTTCGTCATTTACATTATACAAAGACACCATGTTATCTGCCGATTCTATTTCGAGAAGTGGAGGATTTTGATTGGGAATGTTGTCTCTTACAATTGGATATTCCACTGTCGCTTACACTGCCTTGAGTAAGATTTTCTTCAGGTTCAGAAAATTCTCTTGACCAGGAATTCAAAGGAATCAGATGACTATCATCCTTGGCGCTCTTCCGCTGCTCTTCATGCCGTTTAA

mRNA sequence

ATGGGGAAGAACATGTGTGTGTGTGTGTGTGTTTATGCCTCTACTGATGATACTAAGTGGTGGTGGGTTGAAATGCAGAGGTTGGAGAGTGTGTATGAGTCTGATCCTTTGTTGTATTCGAATATGGTGGAAGTTTTGAAGAAAGAGATGAATGATGGAATTGCTAGGAACCTCACCAGTTGTAGCAGAGCCTTTCTTTGGCTTACAAGGTCCCTGGATTTTACAGTGGCGTTACTAGAGAAGTCAAGAGAAGAACCTAGGCTGAGCATGGAGCAAGCAGTAGAGGATGCTTACAACCTTACTCTGAAGCCATGGCATGGATGGATTTCATCTGCTGCTGTCAAAATAGCTCTGAAACTTGTGCCCGACAGTGAAAGGTTTGATCGTCTCCTAACAGCCAACGACGAACGAAACGACACCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAGCTCTCACCTTTTCTAGAACACATCCATTCTATTCTGGTTCAGAAAATTCTCTTGACCAGGAATTCAAAGGAATCAGATGACTATCATCCTTGGCGCTCTTCCGCTGCTCTTCATGCCGTTTAA

Coding sequence (CDS)

ATGGGGAAGAACATGTGTGTGTGTGTGTGTGTTTATGCCTCTACTGATGATACTAAGTGGTGGTGGGTTGAAATGCAGAGGTTGGAGAGTGTGTATGAGTCTGATCCTTTGTTGTATTCGAATATGGTGGAAGTTTTGAAGAAAGAGATGAATGATGGAATTGCTAGGAACCTCACCAGTTGTAGCAGAGCCTTTCTTTGGCTTACAAGGTCCCTGGATTTTACAGTGGCGTTACTAGAGAAGTCAAGAGAAGAACCTAGGCTGAGCATGGAGCAAGCAGTAGAGGATGCTTACAACCTTACTCTGAAGCCATGGCATGGATGGATTTCATCTGCTGCTGTCAAAATAGCTCTGAAACTTGTGCCCGACAGTGAAAGGTTTGATCGTCTCCTAACAGCCAACGACGAACGAAACGACACCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAGCTCTCACCTTTTCTAGAACACATCCATTCTATTCTGGTTCAGAAAATTCTCTTGACCAGGAATTCAAAGGAATCAGATGACTATCATCCTTGGCGCTCTTCCGCTGCTCTTCATGCCGTTTAA

Protein sequence

MGKNMCVCVCVYASTDDTKWWWVEMQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSREEPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEEIDSFISQLSPFLEHIHSILVQKILLTRNSKESDDYHPWRSSAALHAV
Homology
[Close]
BLAST of CmoCh04G025440 vs. ExPASy Swiss-Prot
Match: Q9LU33 (Glycolipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=GLTP3 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.1e-40
Identity = 78/139 (56.12%), Postives = 107/139 (76.98%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLE ++ESDPL+YSN+VE+L+KE  +G +R   SCSRA LWLTR++DFT+ALL++  +
Sbjct: 84  IQRLEKMWESDPLVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFTLALLQRLVK 143

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           +   +MEQA+E+ YNLT+KPWHGWISSAA K+ALKLVP++  F  +L A DE +  + ++
Sbjct: 144 DMSQNMEQAIEECYNLTIKPWHGWISSAAFKVALKLVPNNNTFINVLAAKDETHQMVQDD 203

Query: 145 IDSFISQLSPFLEHIHSIL 164
           I S IS L P L  +HSIL
Sbjct: 204 ITSLISLLIPLLSQLHSIL 222

[Close]
BLAST of CmoCh04G025440 vs. ExPASy Swiss-Prot
Match: Q6NLQ3 (Glycolipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=GLTP2 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.9e-34
Identity = 70/141 (49.65%), Postives = 95/141 (67.38%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLE  YE+D  +YSN+ E+LKKE  +G ++ + SC RA  WLTR++DFT  LL    +
Sbjct: 74  IQRLEKFYETDSCVYSNLAEILKKEKEEGTSKMVASCGRALFWLTRTMDFTAGLLRLLSK 133

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           E    ME+ VE+ Y  TLKP HGWI+SAA K+ LKLVPD++ F   + A DE  DTL E+
Sbjct: 134 EMSSKMEELVEECYMTTLKPHHGWIASAAFKVCLKLVPDNKTFMEAIGARDESYDTLRED 193

Query: 145 IDSFISQLSPFLEHIHSILVQ 166
           ID+  S L+P L+ I+ +L Q
Sbjct: 194 IDTLSSLLTPILKEIYFVLEQ 214

[Close]
BLAST of CmoCh04G025440 vs. ExPASy Swiss-Prot
Match: O22797 (Glycolipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=GLTP1 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 6.9e-19
Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 0 

Query: 27  RLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSREEP 86
           RLE  Y SDP  +  +   ++ E+   IA+  +SC+   LWLTR++DF V L        
Sbjct: 59  RLEKNYLSDPDKFKYLYTFVQVEIESKIAKGSSSCTNGLLWLTRAMDFLVELFRNLVAHQ 118

Query: 87  RLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEEID 146
             SM QA  D+Y  TLK WHGW++S+   +ALKL PD ++F  +++     +  +  +++
Sbjct: 119 DWSMPQACADSYQKTLKKWHGWLASSTFSMALKLAPDRKKFMDVISG----SGNIQADME 178

Query: 147 SFISQLSPFLEHIHSIL 164
            F ++  PFL   H  L
Sbjct: 179 RFCAEFGPFLHDNHKFL 191

[Close]
BLAST of CmoCh04G025440 vs. ExPASy Swiss-Prot
Match: D3ZY60 (Pleckstrin homology domain-containing family A member 8 OS=Rattus norvegicus OX=10116 GN=Plekha8 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.3e-06
Identity = 34/141 (24.11%), Postives = 66/141 (46.81%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           ++++   Y ++   ++ + +++  E+   +AR   S + A LWL R L F    L + + 
Sbjct: 366 IKKVNQKYITNKEEFTTLQKIVLHEVEADVARVRNSATEALLWLKRGLKFLKGFLTEVKN 425

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLT--ANDERNDTLV 144
             +  ++ A+ +AY  TL+  HGW+      +AL+  P  E F   LT    D + +   
Sbjct: 426 GEK-DIQTALNNAYGKTLRQHHGWVVRGVFALALRAAPSYEDFVAALTIKEGDHQKEAFS 485

Query: 145 EEIDSFISQLSPFLEHIHSIL 164
             +   +S   P +E   +IL
Sbjct: 486 AGMQRDLSLYLPAMEKQLAIL 505

[Close]
BLAST of CmoCh04G025440 vs. ExPASy Swiss-Prot
Match: Q5U3N0 (Pleckstrin homology domain-containing family A member 8 OS=Danio rerio OX=7955 GN=plekha8 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.9e-06
Identity = 35/141 (24.82%), Postives = 65/141 (46.10%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +++++    SDP  +  +  ++  E+   +A+   S + A LWL R L F    L +   
Sbjct: 395 IKKIQQKVVSDPESFPTLQSIVLHEVKTEVAQVRNSATEALLWLKRGLKFLKEFLSEINT 454

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTA--NDERNDTLV 144
             +  ++ A+ +AY  TL+ +HGW+      +AL+  P  E F   L +   DE  +   
Sbjct: 455 GVK-DVQGALYNAYGKTLRQYHGWVVRGVFALALRAAPSYEGFMAALVSYEGDELKEGFR 514

Query: 145 EEIDSFISQLSPFLEHIHSIL 164
             +   +    P +E+  SIL
Sbjct: 515 TGMHRDLDIYLPAMENQLSIL 534

[Close]
BLAST of CmoCh04G025440 vs. ExPASy TrEMBL
Match: A0A6J1E660 (glycolipid transfer protein 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431144 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.0e-71
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE
Sbjct: 63  IQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 122

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE
Sbjct: 123 EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 182

Query: 145 IDSFISQLSPFLEHIHSILV 165
           IDSFISQLSPFLEHIHSILV
Sbjct: 183 IDSFISQLSPFLEHIHSILV 202

[Close]
BLAST of CmoCh04G025440 vs. ExPASy TrEMBL
Match: A0A6J1E6H1 (glycolipid transfer protein 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431144 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.1e-70
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE
Sbjct: 63  IQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 122

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE
Sbjct: 123 EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 182

Query: 145 IDSFISQLSPFLEHIHSIL 164
           IDSFISQLSPFLEHIHSIL
Sbjct: 183 IDSFISQLSPFLEHIHSIL 201

[Close]
BLAST of CmoCh04G025440 vs. ExPASy TrEMBL
Match: A0A6J1JGT9 (glycolipid transfer protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486880 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 8.9e-70
Identity = 137/145 (94.48%), Postives = 141/145 (97.24%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLESVYESDPLLYSNMVEVLKKEMNDGIAR LTSCSRAFLWLTRSLDFTVALLEKSRE
Sbjct: 63  IQRLESVYESDPLLYSNMVEVLKKEMNDGIARKLTSCSRAFLWLTRSLDFTVALLEKSRE 122

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDE+NDTLVEE
Sbjct: 123 EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDEQNDTLVEE 182

Query: 145 IDSFISQLSPFLEHIHSILVQKILL 170
           IDSFISQLSPFLEHIHSILV   ++
Sbjct: 183 IDSFISQLSPFLEHIHSILVNPSII 207

[Close]
BLAST of CmoCh04G025440 vs. ExPASy TrEMBL
Match: A0A6J1JRD9 (glycolipid transfer protein 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486880 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.4e-69
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLESVYESDPLLYSNMVEVLKKEMNDGIAR LTSCSRAFLWLTRSLDFTVALLEKSRE
Sbjct: 63  IQRLESVYESDPLLYSNMVEVLKKEMNDGIARKLTSCSRAFLWLTRSLDFTVALLEKSRE 122

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDE+NDTLVEE
Sbjct: 123 EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDEQNDTLVEE 182

Query: 145 IDSFISQLSPFLEHIHSIL 164
           IDSFISQLSPFLEHIHSIL
Sbjct: 183 IDSFISQLSPFLEHIHSIL 201

[Close]
BLAST of CmoCh04G025440 vs. ExPASy TrEMBL
Match: A0A5D3DJY9 (Glycolipid transfer protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00330 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.7e-58
Identity = 115/143 (80.42%), Postives = 129/143 (90.21%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLE++YESDP +YSNMVE+LKKE N+G AR LTSCSRAFLWLTRSLDFTV+LL+KS+E
Sbjct: 46  IQRLETMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKE 105

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           EPRLSMEQAVEDAYNLTLKPWHGWISSAA KIALKLVPDSE F  LL A DE ND LV+E
Sbjct: 106 EPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFTNLLMAKDENNDALVKE 165

Query: 145 IDSFISQLSPFLEHIHSILVQKI 168
           IDSFISQL+PFLE IH+ILV+ +
Sbjct: 166 IDSFISQLAPFLEDIHNILVRSL 188

[Close]
BLAST of CmoCh04G025440 vs. NCBI nr
Match: KAG7032853.1 (Glycolipid transfer protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 296.2 bits (757), Expect = 2.0e-76
Identity = 151/167 (90.42%), Postives = 153/167 (91.62%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLT             RE
Sbjct: 63  IQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLT-------------RE 122

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTAN+ERNDTLVEE
Sbjct: 123 EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANEERNDTLVEE 182

Query: 145 IDSFISQLSPFLEHIHSILVQKILLTRNSKESDDYHPWRSSAALHAV 192
           IDSFISQLSPFLEHIHSILVQKILLTRNSKESDDYHPW SSAALHAV
Sbjct: 183 IDSFISQLSPFLEHIHSILVQKILLTRNSKESDDYHPWHSSAALHAV 216

[Close]
BLAST of CmoCh04G025440 vs. NCBI nr
Match: XP_022923457.1 (glycolipid transfer protein 3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-70
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE
Sbjct: 63  IQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 122

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE
Sbjct: 123 EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 182

Query: 145 IDSFISQLSPFLEHIHSILV 165
           IDSFISQLSPFLEHIHSILV
Sbjct: 183 IDSFISQLSPFLEHIHSILV 202

[Close]
BLAST of CmoCh04G025440 vs. NCBI nr
Match: XP_022923464.1 (glycolipid transfer protein 3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 6.3e-70
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE
Sbjct: 63  IQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 122

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE
Sbjct: 123 EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 182

Query: 145 IDSFISQLSPFLEHIHSIL 164
           IDSFISQLSPFLEHIHSIL
Sbjct: 183 IDSFISQLSPFLEHIHSIL 201

[Close]
BLAST of CmoCh04G025440 vs. NCBI nr
Match: XP_022989802.1 (glycolipid transfer protein 3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 273.1 bits (697), Expect = 1.8e-69
Identity = 137/145 (94.48%), Postives = 141/145 (97.24%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLESVYESDPLLYSNMVEVLKKEMNDGIAR LTSCSRAFLWLTRSLDFTVALLEKSRE
Sbjct: 63  IQRLESVYESDPLLYSNMVEVLKKEMNDGIARKLTSCSRAFLWLTRSLDFTVALLEKSRE 122

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDE+NDTLVEE
Sbjct: 123 EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDEQNDTLVEE 182

Query: 145 IDSFISQLSPFLEHIHSILVQKILL 170
           IDSFISQLSPFLEHIHSILV   ++
Sbjct: 183 IDSFISQLSPFLEHIHSILVNPSII 207

[Close]
BLAST of CmoCh04G025440 vs. NCBI nr
Match: KAG6602162.1 (Glycolipid transfer protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.1 bits (697), Expect = 1.8e-69
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE
Sbjct: 63  IQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 122

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTAN+ERNDTLVEE
Sbjct: 123 EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANEERNDTLVEE 182

Query: 145 IDSFISQLSPFLEHIHSIL 164
           IDSFISQLSPFLEHIHSIL
Sbjct: 183 IDSFISQLSPFLEHIHSIL 201

[Close]
BLAST of CmoCh04G025440 vs. TAIR 10
Match: AT3G21260.3 (Glycolipid transfer protein (GLTP) family protein )

HSP 1 Score: 166.0 bits (419), Expect = 2.9e-41
Identity = 78/139 (56.12%), Postives = 107/139 (76.98%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLE ++ESDPL+YSN+VE+L+KE  +G +R   SCSRA LWLTR++DFT+ALL++  +
Sbjct: 84  IQRLEKMWESDPLVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFTLALLQRLVK 143

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           +   +MEQA+E+ YNLT+KPWHGWISSAA K+ALKLVP++  F  +L A DE +  + ++
Sbjct: 144 DMSQNMEQAIEECYNLTIKPWHGWISSAAFKVALKLVPNNNTFINVLAAKDETHQMVQDD 203

Query: 145 IDSFISQLSPFLEHIHSIL 164
           I S IS L P L  +HSIL
Sbjct: 204 ITSLISLLIPLLSQLHSIL 222

[Close]
BLAST of CmoCh04G025440 vs. TAIR 10
Match: AT3G21260.2 (Glycolipid transfer protein (GLTP) family protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-40
Identity = 77/137 (56.20%), Postives = 105/137 (76.64%), Query Frame = 0 

Query: 27  RLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSREEP 86
           RLE ++ESDPL+YSN+VE+L+KE  +G +R   SCSRA LWLTR++DFT+ALL++  ++ 
Sbjct: 2   RLEKMWESDPLVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFTLALLQRLVKDM 61

Query: 87  RLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEEID 146
             +MEQA+E+ YNLT+KPWHGWISSAA K+ALKLVP++  F  +L A DE +  + ++I 
Sbjct: 62  SQNMEQAIEECYNLTIKPWHGWISSAAFKVALKLVPNNNTFINVLAAKDETHQMVQDDIT 121

Query: 147 SFISQLSPFLEHIHSIL 164
           S IS L P L  +HSIL
Sbjct: 122 SLISLLIPLLSQLHSIL 138

[Close]
BLAST of CmoCh04G025440 vs. TAIR 10
Match: AT3G21260.1 (Glycolipid transfer protein (GLTP) family protein )

HSP 1 Score: 158.3 bits (399), Expect = 6.1e-39
Identity = 74/133 (55.64%), Postives = 102/133 (76.69%), Query Frame = 0 

Query: 31  VYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSREEPRLSM 90
           ++ESDPL+YSN+VE+L+KE  +G +R   SCSRA LWLTR++DFT+ALL++  ++   +M
Sbjct: 1   MWESDPLVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFTLALLQRLVKDMSQNM 60

Query: 91  EQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEEIDSFIS 150
           EQA+E+ YNLT+KPWHGWISSAA K+ALKLVP++  F  +L A DE +  + ++I S IS
Sbjct: 61  EQAIEECYNLTIKPWHGWISSAAFKVALKLVPNNNTFINVLAAKDETHQMVQDDITSLIS 120

Query: 151 QLSPFLEHIHSIL 164
            L P L  +HSIL
Sbjct: 121 LLIPLLSQLHSIL 133

[Close]
BLAST of CmoCh04G025440 vs. TAIR 10
Match: AT1G21360.1 (glycolipid transfer protein 2 )

HSP 1 Score: 144.8 bits (364), Expect = 7.0e-35
Identity = 70/141 (49.65%), Postives = 95/141 (67.38%), Query Frame = 0 

Query: 25  MQRLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSRE 84
           +QRLE  YE+D  +YSN+ E+LKKE  +G ++ + SC RA  WLTR++DFT  LL    +
Sbjct: 74  IQRLEKFYETDSCVYSNLAEILKKEKEEGTSKMVASCGRALFWLTRTMDFTAGLLRLLSK 133

Query: 85  EPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEE 144
           E    ME+ VE+ Y  TLKP HGWI+SAA K+ LKLVPD++ F   + A DE  DTL E+
Sbjct: 134 EMSSKMEELVEECYMTTLKPHHGWIASAAFKVCLKLVPDNKTFMEAIGARDESYDTLRED 193

Query: 145 IDSFISQLSPFLEHIHSILVQ 166
           ID+  S L+P L+ I+ +L Q
Sbjct: 194 IDTLSSLLTPILKEIYFVLEQ 214

[Close]
BLAST of CmoCh04G025440 vs. TAIR 10
Match: AT2G33470.1 (glycolipid transfer protein 1 )

HSP 1 Score: 95.5 bits (236), Expect = 4.9e-20
Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 0 

Query: 27  RLESVYESDPLLYSNMVEVLKKEMNDGIARNLTSCSRAFLWLTRSLDFTVALLEKSREEP 86
           RLE  Y SDP  +  +   ++ E+   IA+  +SC+   LWLTR++DF V L        
Sbjct: 59  RLEKNYLSDPDKFKYLYTFVQVEIESKIAKGSSSCTNGLLWLTRAMDFLVELFRNLVAHQ 118

Query: 87  RLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDERNDTLVEEID 146
             SM QA  D+Y  TLK WHGW++S+   +ALKL PD ++F  +++     +  +  +++
Sbjct: 119 DWSMPQACADSYQKTLKKWHGWLASSTFSMALKLAPDRKKFMDVISG----SGNIQADME 178

Query: 147 SFISQLSPFLEHIHSIL 164
            F ++  PFL   H  L
Sbjct: 179 RFCAEFGPFLHDNHKFL 191

The following BLAST results are available for this feature:
BLAST of CmoCh04G025440 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LU334.1e-4056.12Glycolipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=GLTP3 PE=2 SV=1[more]
Q6NLQ39.9e-3449.65Glycolipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=GLTP2 PE=2 SV=1[more]
O227976.9e-1935.04Glycolipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=GLTP1 PE=2 SV=1[more]
D3ZY602.3e-0624.11Pleckstrin homology domain-containing family A member 8 OS=Rattus norvegicus OX=... [more]
Q5U3N03.9e-0624.82Pleckstrin homology domain-containing family A member 8 OS=Danio rerio OX=7955 G... [more]
BLAST of CmoCh04G025440 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E6608.0e-7199.29glycolipid transfer protein 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1E6H13.1e-7099.28glycolipid transfer protein 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1JGT98.9e-7094.48glycolipid transfer protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1JRD94.4e-6997.84glycolipid transfer protein 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A5D3DJY92.7e-5880.42Glycolipid transfer protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
BLAST of CmoCh04G025440 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7032853.12.0e-7690.42Glycolipid transfer protein 2, partial [Cucurbita argyrosperma subsp. argyrosper... [more]
XP_022923457.11.7e-7099.29glycolipid transfer protein 3-like isoform X1 [Cucurbita moschata][more]
XP_022923464.16.3e-7099.28glycolipid transfer protein 3-like isoform X2 [Cucurbita moschata][more]
XP_022989802.11.8e-6994.48glycolipid transfer protein 3-like isoform X1 [Cucurbita maxima][more]
KAG6602162.11.8e-6998.56Glycolipid transfer protein 3, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CmoCh04G025440 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G21260.32.9e-4156.12Glycolipid transfer protein (GLTP) family protein [more]
AT3G21260.21.5e-4056.20Glycolipid transfer protein (GLTP) family protein [more]
AT3G21260.16.1e-3955.64Glycolipid transfer protein (GLTP) family protein [more]
AT1G21360.17.0e-3549.65glycolipid transfer protein 2 [more]
AT2G33470.14.9e-2035.04glycolipid transfer protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014830Glycolipid transfer protein domainPFAMPF08718GLTPcoord: 25..131
e-value: 2.2E-25
score: 89.7
IPR036497Glycolipid transfer protein superfamilyGENE3D1.10.3520.10Glycolipid transfer proteincoord: 22..165
e-value: 2.5E-33
score: 117.5
IPR036497Glycolipid transfer protein superfamilySUPERFAMILY110004Glycolipid transfer protein, GLTPcoord: 25..165
NoneNo IPR availablePANTHERPTHR10219GLYCOLIPID TRANSFER PROTEIN-RELATEDcoord: 25..168
NoneNo IPR availablePANTHERPTHR10219:SF34GLYCOLIPID TRANSFER PROTEIN 3coord: 25..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G025440.1CmoCh04G025440.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0120009 intermembrane lipid transfer
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0120013 lipid transfer activity