CmoCh04G025340 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G025340
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	thioredoxin-like
Location	Cmo_Chr04: 18609825 .. 18610848 (+)
RNA-Seq Expression	CmoCh04G025340
Synteny	CmoCh04G025340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACTTCCCAAAAAAAAAGGAAAAAAAAAAAAAGAATCGCTTCGGTTTCCTCCATTCATAAAACGAACATAACAGCTCTCCCTGTTGCCCTAAAAGCTTTATCCATCTCCAATGGCGCTCGACAACTGTATACAACTGAGCACCGCCGCCGCCATGTATGGCACCACTTCCATCCCCAAATCTCACCCATTCTCATCCACTTTCCACCAAAAGCCAACTCTCTCCCTTCAACGCCTCAACAAATTCCCCACTTCCACTGCGCGATTCAAGTCCTTCTCTCCTTCCACCTCCGTCTCCACTTTCGGAAAGTCCCGCTCCGTCACCTGTAAAGCTCGCGGCGCCGTTGACGACGGTTAGTCACCCGATCTAATCTTCTCGGTATAAAAATTTTTGTTTACACAATCGAACATTCTCGTTTCTCCGCCTTCTAGGGTTTAGAAATTCGACTCTGTTTTTCTCGTAAATTGCAGTGAAAGAGGTTACAGAGTCGAGCTGGAATGAGTTGGTGGTGGAGAGTGAAAAGACGGTGCTGGTGGAATTTTGGGCGCCGTGGTGTGGACCGTGCAAGATGATTGAGCCAGTGATTAGGGAATTGGCGCAGGATTATGCAGGGAAAATCGTGTGTTTGAAGCTCAATACAGACGCCAGCCCAAATGTAGCCTCGAAATATGGGATTAGAAGCATTCCCACAGTTCTGTTCTTCAAGAATGGACAGAAGAGAGAGGGCGTCATTGGGGCTGTACCCAAATCCACCTTGTCCGCCTCCATTGATAAGTATCTCGAGGTTTGAAGAAATCCCATTCATTAGAGATGGTTTTCGAATCTTCTTCTTCCTCTTCTTGTTGTTGTTCATCTTGTATATGAATATCATCATCATGTTGTGTAAAAATTGGAAAACTCATAACCGTTTCATCAAGAATCTCTTCTTTAATTCTCTGTTGTAGTAGCGATGACTTGTTTGAGTTTGTGAATTTGTAACTTCTGTGCCCATTTTTTTCTTTCTTGGCGGAAATCTATTACCTG

mRNA sequence

CAAACTTCCCAAAAAAAAAGGAAAAAAAAAAAAAGAATCGCTTCGGTTTCCTCCATTCATAAAACGAACATAACAGCTCTCCCTGTTGCCCTAAAAGCTTTATCCATCTCCAATGGCGCTCGACAACTGTATACAACTGAGCACCGCCGCCGCCATGTATGGCACCACTTCCATCCCCAAATCTCACCCATTCTCATCCACTTTCCACCAAAAGCCAACTCTCTCCCTTCAACGCCTCAACAAATTCCCCACTTCCACTGCGCGATTCAAGTCCTTCTCTCCTTCCACCTCCGTCTCCACTTTCGGAAAGTCCCGCTCCGTCACCTGTAAAGCTCGCGGCGCCGTTGACGACGTGAAAGAGGTTACAGAGTCGAGCTGGAATGAGTTGGTGGTGGAGAGTGAAAAGACGGTGCTGGTGGAATTTTGGGCGCCGTGGTGTGGACCGTGCAAGATGATTGAGCCAGTGATTAGGGAATTGGCGCAGGATTATGCAGGGAAAATCGTGTGTTTGAAGCTCAATACAGACGCCAGCCCAAATGTAGCCTCGAAATATGGGATTAGAAGCATTCCCACAGTTCTGTTCTTCAAGAATGGACAGAAGAGAGAGGGCGTCATTGGGGCTGTACCCAAATCCACCTTGTCCGCCTCCATTGATAAGTATCTCGAGGTTTGAAGAAATCCCATTCATTAGAGATGGTTTTCGAATCTTCTTCTTCCTCTTCTTGTTGTTGTTCATCTTGTATATGAATATCATCATCATGTTGTGTAAAAATTGGAAAACTCATAACCGTTTCATCAAGAATCTCTTCTTTAATTCTCTGTTGTAGTAGCGATGACTTGTTTGAGTTTGTGAATTTGTAACTTCTGTGCCCATTTTTTTCTTTCTTGGCGGAAATCTATTACCTG

Coding sequence (CDS)

ATGGCGCTCGACAACTGTATACAACTGAGCACCGCCGCCGCCATGTATGGCACCACTTCCATCCCCAAATCTCACCCATTCTCATCCACTTTCCACCAAAAGCCAACTCTCTCCCTTCAACGCCTCAACAAATTCCCCACTTCCACTGCGCGATTCAAGTCCTTCTCTCCTTCCACCTCCGTCTCCACTTTCGGAAAGTCCCGCTCCGTCACCTGTAAAGCTCGCGGCGCCGTTGACGACGTGAAAGAGGTTACAGAGTCGAGCTGGAATGAGTTGGTGGTGGAGAGTGAAAAGACGGTGCTGGTGGAATTTTGGGCGCCGTGGTGTGGACCGTGCAAGATGATTGAGCCAGTGATTAGGGAATTGGCGCAGGATTATGCAGGGAAAATCGTGTGTTTGAAGCTCAATACAGACGCCAGCCCAAATGTAGCCTCGAAATATGGGATTAGAAGCATTCCCACAGTTCTGTTCTTCAAGAATGGACAGAAGAGAGAGGGCGTCATTGGGGCTGTACCCAAATCCACCTTGTCCGCCTCCATTGATAAGTATCTCGAGGTTTGA

Protein sequence

MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTSVSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIRELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASIDKYLEV

Homology

[Close]

BLAST of CmoCh04G025340 vs. ExPASy Swiss-Prot
Match: P07591 (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2)

HSP 1 Score: 184.9 bits (468), Expect = 8.4e-46
Identity = 100/186 (53.76%), Postives = 135/186 (72.58%), Query Frame = 0


Query: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTS 60
           MA++NC+QLST+A++ GT ++ KSH      H +P+ S   +  F      F + S S S
Sbjct: 1   MAIENCLQLSTSASV-GTVAV-KSH----VHHLQPS-SKVNVPTFRGLKRSFPALSSSVS 60

Query: 61  VSTFGKSR--SVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPV 120
            S+  + R  SV CKA  AV +V++V +SSW E V+ESE  V+V+FWAPWCGPCK+I PV
Sbjct: 61  SSSPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPV 120

Query: 121 IRELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSA 180
           I ELA++Y+GKI   KLNTD +P +A++Y IRSIPTVLFFKNG+++E +IGAVPKSTL+ 
Sbjct: 121 IDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTD 179

Query: 181 SIDKYL 185
           SI+KYL
Sbjct: 181 SIEKYL 179

[Close]

BLAST of CmoCh04G025340 vs. ExPASy Swiss-Prot
Match: P48384 (Thioredoxin M-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.4e-42
Identity = 77/115 (66.96%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 70  VTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIRELAQDYAGK 129
           V   AR AV++V+ V +SSW+ELV+ SE  VLV+FWAPWCGPC+MI P+I ELA++YAGK
Sbjct: 58  VLLHAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGK 117

Query: 130 IVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASIDKYL 185
           I C KLNTD SPN A+KYGIRSIPTVLFFKNG++++ VIGAVPK+TLS  ++KY+
Sbjct: 118 IKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172

[Close]

BLAST of CmoCh04G025340 vs. ExPASy Swiss-Prot
Match: Q41864 (Thioredoxin M-type, chloroplastic OS=Zea mays OX=4577 GN=TRM1 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-40
Identity = 77/113 (68.14%), Postives = 91/113 (80.53%), Query Frame = 0


Query: 72  CKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIRELAQDYAGKIV 131
           C+++ AVD+V    E +W+ LV+  E  VLVEFWAPWCGPC+MI PVI ELA+DYAGKI 
Sbjct: 52  CQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKDYAGKIT 111

Query: 132 CLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASIDKYL 185
           C K+NTD SPNVAS YGIRSIPTVL FK G+K+E VIGAVPKSTL+  IDKY+
Sbjct: 112 CCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAVPKSTLTTLIDKYI 164

[Close]

BLAST of CmoCh04G025340 vs. ExPASy Swiss-Prot
Match: Q9ZP20 (Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TRXM PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.8e-39
Identity = 72/113 (63.72%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 72  CKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIRELAQDYAGKIV 131
           C+    VD+V    E +W+ +V+ SE  VLVEFWAPWCGPC+MI PVI ELA++Y GKI 
Sbjct: 58  CQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIK 117

Query: 132 CLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASIDKYL 185
           C K+NTD SPN+A+ YGIRSIPTVL FKNG+K+E VIGAVPK+TL+  IDKY+
Sbjct: 118 CCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKYV 170

[Close]

BLAST of CmoCh04G025340 vs. ExPASy Swiss-Prot
Match: Q9ZP21 (Thioredoxin M-type, chloroplastic OS=Triticum aestivum OX=4565 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.8e-39
Identity = 72/113 (63.72%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 72  CKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIRELAQDYAGKIV 131
           CK +  VD+V    E +W+ +V+  E  VLVEFWAPWCGPC+MI PVI ELA+DY GKI 
Sbjct: 61  CKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIK 120

Query: 132 CLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASIDKYL 185
           C K+NTD  PN+AS YGIRSIPTVL FK+G+K+E VIGAVPK+TL   IDKY+
Sbjct: 121 CCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLCTIIDKYI 173

[Close]

BLAST of CmoCh04G025340 vs. ExPASy TrEMBL
Match: A0A6J1GXN7 (uncharacterized protein LOC111457772 OS=Cucurbita moschata OX=3662 GN=LOC111457772 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.3e-99
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTS 60
           MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTS
Sbjct: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTS 60

Query: 61  VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120
           VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR
Sbjct: 61  VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120

Query: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180
           ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI
Sbjct: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180

Query: 181 DKYLEV 187
           DKYLEV
Sbjct: 181 DKYLEV 186

[Close]

BLAST of CmoCh04G025340 vs. ExPASy TrEMBL
Match: A0A6J1JL70 (uncharacterized protein LOC111486882 OS=Cucurbita maxima OX=3661 GN=LOC111486882 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 9.8e-98
Identity = 184/186 (98.92%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTS 60
           MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQK TLSLQRLNKFPTS ARFKSFSPSTS
Sbjct: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKTTLSLQRLNKFPTSIARFKSFSPSTS 60

Query: 61  VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120
           VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR
Sbjct: 61  VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120

Query: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180
           ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI
Sbjct: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180

Query: 181 DKYLEV 187
           DKYLEV
Sbjct: 181 DKYLEV 186

[Close]

BLAST of CmoCh04G025340 vs. ExPASy TrEMBL
Match: A0A5D3DJJ9 (Thioredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00860 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.9e-69
Identity = 145/191 (75.92%), Postives = 154/191 (80.63%), Query Frame = 0


Query: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSST--FHQK---PTLSLQRLNKFPTSTARFKSF 60
           MALDNCIQLSTAA M    SIPKSH FSST  F QK    TLSLQRLNKFPT        
Sbjct: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTANFPQKLSFSTLSLQRLNKFPT-------- 60

Query: 61  SPSTSVSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMI 120
                  TF K  SVTC+ARGAVDDVKEVTESSWN LVVE++K VLVEFWAPWCGPCK+I
Sbjct: 61  ------PTFRKPFSVTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKII 120

Query: 121 EPVIRELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKST 180
           EPVI+ELA +YAGKI CLKLNTD SPNVASKYGIRSIPTVLFFKNG+KRE VIGAVPKST
Sbjct: 121 EPVIKELAAEYAGKIECLKLNTDVSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKST 177

Query: 181 LSASIDKYLEV 187
           L+ASIDKY+EV
Sbjct: 181 LAASIDKYIEV 177

[Close]

BLAST of CmoCh04G025340 vs. ExPASy TrEMBL
Match: A0A1S4DTR8 (thioredoxin-like OS=Cucumis melo OX=3656 GN=LOC107990489 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.9e-69
Identity = 145/191 (75.92%), Postives = 154/191 (80.63%), Query Frame = 0


Query: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSST--FHQK---PTLSLQRLNKFPTSTARFKSF 60
           MALDNCIQLSTAA M    SIPKSH FSST  F QK    TLSLQRLNKFPT        
Sbjct: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTANFPQKLSFSTLSLQRLNKFPT-------- 60

Query: 61  SPSTSVSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMI 120
                  TF K  SVTC+ARGAVDDVKEVTESSWN LVVE++K VLVEFWAPWCGPCK+I
Sbjct: 61  ------PTFRKPFSVTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKII 120

Query: 121 EPVIRELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKST 180
           EPVI+ELA +YAGKI CLKLNTD SPNVASKYGIRSIPTVLFFKNG+KRE VIGAVPKST
Sbjct: 121 EPVIKELAAEYAGKIECLKLNTDVSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKST 177

Query: 181 LSASIDKYLEV 187
           L+ASIDKY+EV
Sbjct: 181 LAASIDKYIEV 177

[Close]

BLAST of CmoCh04G025340 vs. ExPASy TrEMBL
Match: A0A0A0KIC1 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G343710 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.1e-68
Identity = 143/191 (74.87%), Postives = 154/191 (80.63%), Query Frame = 0


Query: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSST--FHQK---PTLSLQRLNKFPTSTARFKSF 60
           MALDNCIQLSTAA M    SIPKSH FSST  + QK    TLSLQRLNK PT        
Sbjct: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPT-------- 60

Query: 61  SPSTSVSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMI 120
                  TF K  S+TC+ARGAVDDVKEVTESSWN LVVE++K VLVEFWAPWCGPCK+I
Sbjct: 61  ------PTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKII 120

Query: 121 EPVIRELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKST 180
           EPVI+ELA +YAGKIVCLKLNTD SPNVASKYGIRSIPTVLFFKNG+KRE VIGAVPKST
Sbjct: 121 EPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKST 177

Query: 181 LSASIDKYLEV 187
           L+ASIDKY+EV
Sbjct: 181 LTASIDKYIEV 177

[Close]

BLAST of CmoCh04G025340 vs. NCBI nr
Match: XP_022955939.1 (uncharacterized protein LOC111457772 [Cucurbita moschata])

HSP 1 Score: 371.3 bits (952), Expect = 4.8e-99
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTS 60
           MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTS
Sbjct: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTS 60

Query: 61  VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120
           VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR
Sbjct: 61  VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120

Query: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180
           ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI
Sbjct: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180

Query: 181 DKYLEV 187
           DKYLEV
Sbjct: 181 DKYLEV 186

[Close]

BLAST of CmoCh04G025340 vs. NCBI nr
Match: XP_023524932.1 (uncharacterized protein LOC111788711 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-98
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTS 60
           MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQR NKFPTSTARFKSFSPSTS
Sbjct: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRFNKFPTSTARFKSFSPSTS 60

Query: 61  VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120
           VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR
Sbjct: 61  VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120

Query: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180
           ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI
Sbjct: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180

Query: 181 DKYLEV 187
           DKYLEV
Sbjct: 181 DKYLEV 186

[Close]

BLAST of CmoCh04G025340 vs. NCBI nr
Match: KAG6602152.1 (hypothetical protein SDJN03_07385, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 368.6 bits (945), Expect = 3.1e-98
Identity = 184/186 (98.92%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTS 60
           MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPT+TARFKSFSPSTS
Sbjct: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTTTARFKSFSPSTS 60

Query: 61  VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120
           VS+FGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR
Sbjct: 61  VSSFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120

Query: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180
           ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI
Sbjct: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180

Query: 181 DKYLEV 187
           DKYLEV
Sbjct: 181 DKYLEV 186

[Close]

BLAST of CmoCh04G025340 vs. NCBI nr
Match: KAG7032842.1 (hypothetical protein SDJN02_06892 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 366.7 bits (940), Expect = 1.2e-97
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTS 60
           MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFS STS
Sbjct: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSTSTS 60

Query: 61  VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120
           VS+FGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR
Sbjct: 61  VSSFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120

Query: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180
           ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI
Sbjct: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180

Query: 181 DKYLEV 187
           DKYLEV
Sbjct: 181 DKYLEV 186

[Close]

BLAST of CmoCh04G025340 vs. NCBI nr
Match: XP_022989806.1 (uncharacterized protein LOC111486882 [Cucurbita maxima])

HSP 1 Score: 365.9 bits (938), Expect = 2.0e-97
Identity = 184/186 (98.92%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTS 60
           MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQK TLSLQRLNKFPTS ARFKSFSPSTS
Sbjct: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSSTFHQKTTLSLQRLNKFPTSIARFKSFSPSTS 60

Query: 61  VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120
           VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR
Sbjct: 61  VSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIR 120

Query: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180
           ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI
Sbjct: 121 ELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASI 180

Query: 181 DKYLEV 187
           DKYLEV
Sbjct: 181 DKYLEV 186

[Close]

BLAST of CmoCh04G025340 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 7.3e-37
Identity = 62/117 (52.99%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 68  RSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIRELAQDYA 127
           R+V C+A+    D++ V +S+W+ LV+++   V+V+FWAPWCGPCKMI+P++ +LAQ Y 
Sbjct: 69  RAVVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYT 128

Query: 128 GKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASIDKYL 185
           GKI   KLNTD SPN   +YG+RSIPT++ F  G+K++ +IGAVPK+TL++S+DK+L
Sbjct: 129 GKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of CmoCh04G025340 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 142.5 bits (358), Expect = 3.4e-34
Identity = 64/131 (48.85%), Postives = 93/131 (70.99%), Query Frame = 0


Query: 54  SFSPSTSVSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCK 113
           S S ++ VS     R V C+A+     +  V +S+W+ LV+++++ V V+FWAPWCGPCK
Sbjct: 51  SLSKNSRVSRL--RRGVICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCK 110

Query: 114 MIEPVIRELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPK 173
           MI+P++ ELAQ YAG+    KLNTD SP    +YG+RSIPT++ F NG+K++ +IGAV K
Sbjct: 111 MIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNGEKKDTIIGAVSK 170

Query: 174 STLSASIDKYL 185
            TL+ SI+K+L
Sbjct: 171 DTLATSINKFL 179

[Close]

BLAST of CmoCh04G025340 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 141.4 bits (355), Expect = 7.6e-34
Identity = 72/180 (40.00%), Postives = 112/180 (62.22%), Query Frame = 0


Query: 20  SIPKSHPFSSTFHQKPTLSLQRLNKFPTSTARFKSFSPSTSVST------------FGKS 79
           S+P +   SS+    P++S +R++  P     F+    S S+ T              + 
Sbjct: 15  SLPIAASVSSS-SAAPSVSRRRIS--PARFLEFRGLKSSRSLVTQSASLGANRRTRIARG 74

Query: 80  RSVTCKAR---GAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIRELAQ 139
             + C+A+    A  +V  +++S W   V+ES+  VLVEFWAPWCGPC+MI P++ +LA+
Sbjct: 75  GRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAK 134

Query: 140 DYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASIDKYL 185
           D+AGK    K+NTD SPN A++YGIRS+PTV+ FK G+K++ +IGAVP+ TL  +I+++L
Sbjct: 135 DFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of CmoCh04G025340 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-26
Identity = 50/102 (49.02%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 83  EVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIRELAQDYAGKIVCLKLNTDASPN 142
           EVT+ SW + V++SE  VLVEF+  WCGPC+M+  +I E+A DYAGK+ C  LN D    
Sbjct: 70  EVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLP 129

Query: 143 VASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASIDKYL 185
           VA +Y I+++P VL FKNG+KRE ++G +PK    ++I++ L
Sbjct: 130 VAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of CmoCh04G025340 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-26
Identity = 50/102 (49.02%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 83  EVTESSWNELVVESEKTVLVEFWAPWCGPCKMIEPVIRELAQDYAGKIVCLKLNTDASPN 142
           EVT+ SW + V++SE  VLVEF+  WCGPC+M+  +I E+A DYAGK+ C  LN D    
Sbjct: 71  EVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLP 130

Query: 143 VASKYGIRSIPTVLFFKNGQKREGVIGAVPKSTLSASIDKYL 185
           VA +Y I+++P VL FKNG+KRE ++G +PK    ++I++ L
Sbjct: 131 VAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 172

The following BLAST results are available for this feature:

BLAST of CmoCh04G025340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P07591	8.4e-46	53.76	Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2	[more]
P48384	7.4e-42	66.96	Thioredoxin M-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q41864	1.1e-40	68.14	Thioredoxin M-type, chloroplastic OS=Zea mays OX=4577 GN=TRM1 PE=2 SV=1	[more]
Q9ZP20	5.8e-39	63.72	Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TRXM P...	[more]
Q9ZP21	5.8e-39	63.72	Thioredoxin M-type, chloroplastic OS=Triticum aestivum OX=4565 PE=2 SV=1	[more]

BLAST of CmoCh04G025340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GXN7	2.3e-99	100.00	uncharacterized protein LOC111457772 OS=Cucurbita moschata OX=3662 GN=LOC1114577...	[more]
A0A6J1JL70	9.8e-98	98.92	uncharacterized protein LOC111486882 OS=Cucurbita maxima OX=3661 GN=LOC111486882...	[more]
A0A5D3DJJ9	1.9e-69	75.92	Thioredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00...	[more]
A0A1S4DTR8	1.9e-69	75.92	thioredoxin-like OS=Cucumis melo OX=3656 GN=LOC107990489 PE=4 SV=1	[more]
A0A0A0KIC1	2.1e-68	74.87	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G343710...	[more]

BLAST of CmoCh04G025340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955939.1	4.8e-99	100.00	uncharacterized protein LOC111457772 [Cucurbita moschata]	[more]
XP_023524932.1	1.4e-98	99.46	uncharacterized protein LOC111788711 [Cucurbita pepo subsp. pepo]	[more]
KAG6602152.1	3.1e-98	98.92	hypothetical protein SDJN03_07385, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7032842.1	1.2e-97	98.92	hypothetical protein SDJN02_06892 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022989806.1	2.0e-97	98.92	uncharacterized protein LOC111486882 [Cucurbita maxima]	[more]

BLAST of CmoCh04G025340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03520.1	7.3e-37	52.99	Thioredoxin superfamily protein	[more]
AT1G03680.1	3.4e-34	48.85	thioredoxin M-type 1	[more]
AT3G15360.1	7.6e-34	40.00	thioredoxin M-type 4	[more]
AT2G15570.1	2.0e-26	49.02	Thioredoxin superfamily protein	[more]
AT2G15570.2	2.0e-26	49.02	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 100..108 score: 64.57 coord: 108..117 score: 65.44 coord: 148..159 score: 44.63
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 80..185 e-value: 1.2E-35 score: 123.7
None	No IPR available	PANTHER	PTHR45663:SF34	THIOREDOXIN M-TYPE PROTEIN	coord: 42..184
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 42..184
None	No IPR available	CDD	cd02947	TRX_family	coord: 87..181 e-value: 8.18695E-39 score: 126.519
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 81..182 e-value: 8.4E-33 score: 112.4
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 46..185 score: 14.930816
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 85..182 e-value: 8.3E-37 score: 123.4
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 101..119
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 72..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G025340.1	CmoCh04G025340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0009657	plastid organization
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein-disulfide reductase activity