CmoCh04G024970 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCAGGTTTCATGTCCCTCTCTTCACGAAGCTGGTATAGTTTGTGCTGGTAGACAAGCCATTGATACCTTCATTTCAAGCGAAAAGGAGTTAAGCAACGGAAAATTAACCAAACCGAAAAGAATCAACCACAGGAACATACAGTGTTTGAGCATCGGTACCGAAGCCCGAAAGGCCAAGAAATAGCTAATCATGAGTCCGATAAATTTTCTGGAAATCTGTGGCAATTGTCTGTGTTAGTAACAGAAAAAGAAAACTTGAAACATCAGAAGAATTGGAGAAATCTCTCCTCCTATTCTGAAACTGGCTATTATATAGCATTACACAATCAATTCTGATATTACTAAATGAGGTATTCTGAAACTGGCTATTATATAGCATTACACTATCCGAATATGACTAAATCAAATCTAATTCAACTAACTAAATCAAATCTAATTTAAATAACTAAATCAAATCTAATTTAAATAACTCAATCAAATCTAATAAAAAACAATTTAATACCACAATGTCTGAACTACATCAAGCTAAAAATTCCAAAAGAATGGCAGTAATGCTACTGAAGAGAAACGCACCGGTATTAGGTCCGCTACTCGAGCTTTCCTGGAACAAAGTATGAGAATCTTAATCTTTGTGACATGAGAACAAGAAAAAACAAGAGAGAATCGTCAGCTCAGAGCGATCGGAAACGTTTGTACCGAAATCAAATCAATGAAACGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGCACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGAAATGCGGGAAGCAGCGACTCAGTGGATTGTAGTACAGCTCTATTAA ATGTCTCAGGTCCGCTACTCGAGCTTTCCTGGAACAAAGTATGAGAATCTTAATCTTTGTGACATGAGAACAAGAAAAAACAAGAGAGAATCGTCAGCTCAGAGCGATCGGAAACGTTTGTACCGAAATCAAATCAATGAAACGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGCACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGAAATGCGGGAAGCAGCGACTCAGTGGATTGTAGTACAGCTCTATTAA ATGTCTCAGGTCCGCTACTCGAGCTTTCCTGGAACAAAGTATGAGAATCTTAATCTTTGTGACATGAGAACAAGAAAAAACAAGAGAGAATCGTCAGCTCAGAGCGATCGGAAACGTTTGTACCGAAATCAAATCAATGAAACGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGCACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGAAATGCGGGAAGCAGCGACTCAGTGGATTGTAGTACAGCTCTATTAA MSQVRYSSFPGTKYENLNLCDMRTRKNKRESSAQSDRKRLYRNQINETQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPHLREERVESQGEMREAATQWIVVQLY Homology
BLAST of CmoCh04G024970 vs. ExPASy TrEMBL
Match: A0A4Z2HYN4 (Uncharacterized protein OS=Liparis tanakae OX=230148 GN=EYF80_019051 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.1e-07 Identity = 44/115 (38.26%), Postives = 67/115 (58.26%), Query Frame = 0
BLAST of CmoCh04G024970 vs. ExPASy TrEMBL
Match: V6LLP0 (Uncharacterized protein OS=Spironucleus salmonicida OX=348837 GN=SS50377_14564 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 7.4e-05 Identity = 38/116 (32.76%), Postives = 71/116 (61.21%), Query Frame = 0
BLAST of CmoCh04G024970 vs. ExPASy TrEMBL
Match: A0A6P6NDE4 (trichohyalin-like OS=Carassius auratus OX=7957 GN=LOC113078422 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 8.2e-04 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 0
BLAST of CmoCh04G024970 vs. NCBI nr
Match: TNN70768.1 (hypothetical protein EYF80_019051 [Liparis tanakae]) HSP 1 Score: 65.9 bits (159), Expect = 4.3e-07 Identity = 44/115 (38.26%), Postives = 67/115 (58.26%), Query Frame = 0
BLAST of CmoCh04G024970 vs. NCBI nr
Match: XP_025752877.1 (golgin subfamily A member 6-like protein 22 [Oreochromis niloticus]) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-05 Identity = 38/122 (31.15%), Postives = 72/122 (59.02%), Query Frame = 0
BLAST of CmoCh04G024970 vs. NCBI nr
Match: EST45492.1 (Hypothetical protein SS50377_14564 [Spironucleus salmonicida]) HSP 1 Score: 57.4 bits (137), Expect = 1.5e-04 Identity = 38/116 (32.76%), Postives = 71/116 (61.21%), Query Frame = 0
BLAST of CmoCh04G024970 vs. NCBI nr
Match: XP_025753541.1 (golgin subfamily A member 6-like protein 22 [Oreochromis niloticus]) HSP 1 Score: 55.1 bits (131), Expect = 7.6e-04 Identity = 35/122 (28.69%), Postives = 68/122 (55.74%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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