CmoCh04G024010 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G024010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	BHLH domain-containing protein
Location	Cmo_Chr04: 17881789 .. 17884338 (-)
RNA-Seq Expression	CmoCh04G024010
Synteny	CmoCh04G024010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCAATGGCACTTGCAAACTCATCTGTACATGAAGCCGATGGCATGGACAAAGCTGGTGGATATATCAAGTCTATACCCATTGCTACCCATGACACTCCAAATGCTACCTTTCTCTTTCGAAACACGACGAATTACCAACTCGATCACCATCAGCAGCAGCAGCAGCAGCAGCAGCAACTGCCTCATTCTCTCATCAACTTCAAGTGTGGGATTGACAGTATCTTCCATAAGAACAATGAATCTTTGCTGAGCTTTGAGCCACAAGGGGTTTGTCAAGACACTTACAATTGGGATGATCACCAGCGTTTGATGGAAGATCCCAATTGCTTTCAAACAGCTACCAATGGTTATTCCTCTCCAAAAGAGAACAAAAATGGTGATGGGTCTGTGTATGATTGGCTTTACTCTGAAGCAAGTGGTGTTTCTGATGCCATTCAGGAAGCTGAAGGAGCTCACGAGGTTGCCAATCAAAAGCGACCTCATATGGTATTGAATTCCAAAGTTTTCAATTGTTGTTTTCTGCAATAAGTTTAAAATTTTTTTTTTTTCCTTTTTGTTGAGAAAATGTGAGATTCGTATCGATTGGGGAGGAGAACAAAACATTCTTTATAAGGGCATGGAAACCTCTCCTTAGTAGACGCGTTTTAAAAACCTTGAAGAAAAGTCCGAAAGGTAAAATCAAAGAAGACAATATCTACTAGCAGTGGGCTTGAGCCGTTACAAATGGTATCAGAGCCAGACAACGGATGATGAGCCAGTGAGGAGGATAAGCTCCAAAGAGGGGTGGAAAAGAGGCGATGTGCTAGCAAGCACACTAGGCCCTAAAGGAGGTGGATTGGAGGGTCCCACATCAATTGGAGAAGGGAACAAGTGTCAGCGGGGACGCTGGCCACAAAAGAAGGTGGATTGTGAGATCCCACATCGATTGGGGAGGAGAACAAAACATTCTTTATAAAGGTGTAGAAACCTCTCACTACAAAAAAGGACAGGCTGGGGTAGAAAATGTTTGAATTCTTAACTAAATTACAAGTTTTTTTATTTTGAAAGTTAGCTTAGAAGAAGTGTTTGATTGATTGATCGACTGACAGGGAGAGAGCAGTGGGAGTGTTAGTAAGAAGCAATGCACAGCAGCTGCAGCTAAGAAACAGAAACCCAAATCATCAACAGCAAAGGATCCACAGAGCATTGCAGCCAAGGTTTTAGTTTTGTTTTTCTGACAACGTTGGCTTACAATTTAAGGAACAAATAATTTTAAGGTTCTGAAAGAATGTCTGCTTTTGTCTTTGTTTTTATGTTTCTTAGAATCGACGAGAGAGGATTAGCGAGCGGCTGAAGATACTTCAAGAATTGGTTCCCAATGGCTCCAAGGTGCTTACTCTTATCTAATATTAAAAACATCTTCATATCTCAATACGCTCCGTTCCTTCGTTCTAATAAAGGCAGATCTTCCTCTTAACTAGCCAATGTGAAACTCCAAAAATCTCTTCATCTTAAATAGTCATCTACTCGTCTAAACACTATCCAGTGTCGGCTCCTTTCAATCAATCTAATAGATCTCCTTCATGCATCGTTTCTATGAACACACCTTCGAGACTCACATGTTTATTTATTTGACACCCACCCAAGAATTCTATGTGAGATTCCATATTGATTGTAGAGGGGAACGAAGCATTCTTTATAAGGGTATAGATATCTCTCGGTAGGTGGGCTTAGGCTGTTATATTCCATTACTAAGTTATGGATATGATTCTGATAGGACAAGTGATCTTGTCCACGTTGAATATATACTCTCGTAGTTTTGCTTTTGATTCCTCAGAAACTTAACTTTCTCGGAACTCTACTCTTTCAGGTTGATTTGGTAACGATGTTGGAAAAAGCAATTAGTTATGTAAAATTTCTTCAACTTCAAGTGAAGGTACAAATTCCATATCACTCTGTTTCCAAATTTTGGATAAAGATCCTTCCTTCTTGGCTCTGATATCATAGTAAAAATTTTGAATATCAGATCCTAGCTACGGATGAGTTTTGGCCAGTTCAAGGTGGGAAAGCTCCTGATATATCACAAGTTAAGGAAGCCATTGATGCTATTCTTTCATCTCAAAGAGAAAGAAGTTCAAGCTCAAACAGTCAAAAATGATGGAATCAGTAGACATAATTTGTATGAGAACAGTTTAGAGCACTCAATAATTCAAACCCATGAATTAATAAACCATTCTGATAAAGAAATGACAAAAAAAAACGACAAGATTTGGATCAGAAATTAATGCTGTTCCTTAAAAAAATGAAGCTGGAAATGTTGTTCTACCCAGTTATGAACTACTCAATGAAGGCCTCACTTGGAGATCTGTTTAGAAAATTTTGTTTTTTAGAGGAGAATCTACCAGCAAATTATATGTATATCTTCTGCAGAATTTCATACAGGCGATTAAATGAACAAAATTAAGTCTGTAATGATCTACAAATAATTAATGCACAGATTTGGAAGATTTAGGATCTTCTCCATTAATAATATATTAAAAGAAAAATGACAGATTATACAAATAAAAT

mRNA sequence

CTCTCAATGGCACTTGCAAACTCATCTGTACATGAAGCCGATGGCATGGACAAAGCTGGTGGATATATCAAGTCTATACCCATTGCTACCCATGACACTCCAAATGCTACCTTTCTCTTTCGAAACACGACGAATTACCAACTCGATCACCATCAGCAGCAGCAGCAGCAGCAGCAGCAACTGCCTCATTCTCTCATCAACTTCAAGTGTGGGATTGACAGTATCTTCCATAAGAACAATGAATCTTTGCTGAGCTTTGAGCCACAAGGGGTTTGTCAAGACACTTACAATTGGGATGATCACCAGCGTTTGATGGAAGATCCCAATTGCTTTCAAACAGCTACCAATGGTTATTCCTCTCCAAAAGAGAACAAAAATGGTGATGGGTCTGTGTATGATTGGCTTTACTCTGAAGCAAGTGGTGTTTCTGATGCCATTCAGGAAGCTGAAGGAGCTCACGAGGTTGCCAATCAAAAGCGACCTCATATGGGAGAGAGCAGTGGGAGTGTTAGTAAGAAGCAATGCACAGCAGCTGCAGCTAAGAAACAGAAACCCAAATCATCAACAGCAAAGGATCCACAGAGCATTGCAGCCAAGAATCGACGAGAGAGGATTAGCGAGCGGCTGAAGATACTTCAAGAATTGGTTCCCAATGGCTCCAAGATCCTAGCTACGGATGAGTTTTGGCCAGTTCAAGGTGGGAAAGCTCCTGATATATCACAAGTTAAGGAAGCCATTGATGCTATTCTTTCATCTCAAAGAGAAAGAAGTTCAAGCTCAAACAGTCAAAAATGATGGAATCAGTAGACATAATTTGTATGAGAACAGTTTAGAGCACTCAATAATTCAAACCCATGAATTAATAAACCATTCTGATAAAGAAATGACAAAAAAAAACGACAAGATTTGGATCAGAAATTAATGCTGTTCCTTAAAAAAATGAAGCTGGAAATGTTGTTCTACCCAGTTATGAACTACTCAATGAAGGCCTCACTTGGAGATCTGTTTAGAAAATTTTGTTTTTTAGAGGAGAATCTACCAGCAAATTATATGTATATCTTCTGCAGAATTTCATACAGGCGATTAAATGAACAAAATTAAGTCTGTAATGATCTACAAATAATTAATGCACAGATTTGGAAGATTTAGGATCTTCTCCATTAATAATATATTAAAAGAAAAATGACAGATTATACAAATAAAAT

Coding sequence (CDS)

ATGGCACTTGCAAACTCATCTGTACATGAAGCCGATGGCATGGACAAAGCTGGTGGATATATCAAGTCTATACCCATTGCTACCCATGACACTCCAAATGCTACCTTTCTCTTTCGAAACACGACGAATTACCAACTCGATCACCATCAGCAGCAGCAGCAGCAGCAGCAGCAACTGCCTCATTCTCTCATCAACTTCAAGTGTGGGATTGACAGTATCTTCCATAAGAACAATGAATCTTTGCTGAGCTTTGAGCCACAAGGGGTTTGTCAAGACACTTACAATTGGGATGATCACCAGCGTTTGATGGAAGATCCCAATTGCTTTCAAACAGCTACCAATGGTTATTCCTCTCCAAAAGAGAACAAAAATGGTGATGGGTCTGTGTATGATTGGCTTTACTCTGAAGCAAGTGGTGTTTCTGATGCCATTCAGGAAGCTGAAGGAGCTCACGAGGTTGCCAATCAAAAGCGACCTCATATGGGAGAGAGCAGTGGGAGTGTTAGTAAGAAGCAATGCACAGCAGCTGCAGCTAAGAAACAGAAACCCAAATCATCAACAGCAAAGGATCCACAGAGCATTGCAGCCAAGAATCGACGAGAGAGGATTAGCGAGCGGCTGAAGATACTTCAAGAATTGGTTCCCAATGGCTCCAAGATCCTAGCTACGGATGAGTTTTGGCCAGTTCAAGGTGGGAAAGCTCCTGATATATCACAAGTTAAGGAAGCCATTGATGCTATTCTTTCATCTCAAAGAGAAAGAAGTTCAAGCTCAAACAGTCAAAAATGA

Protein sequence

MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLPHSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPKENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK

Homology

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BLAST of CmoCh04G024010 vs. ExPASy Swiss-Prot
Match: Q9FJ00 (Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=RSL1 PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-28
Identity = 92/198 (46.46%), Postives = 121/198 (61.11%), Query Frame = 0


Query: 96  WDDHQ------RLMEDPNCFQT------ATNGYSSPKENKNGDGSVYDWLYSEASGVSDA 155
           W  HQ      R+++ PN F+T       +N  S P  N +G+G   DWLYS ++ V+  
Sbjct: 109 WSHHQVDSISPRVIKTPNSFETTSSFGLTSNSMSKPATN-HGNG---DWLYSGSTIVNIG 168

Query: 156 IQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKKQKPKSSTA-KDPQSIAAKNRRER 215
            +    + ++A  KRP  GE++  +SKK  ++    K KPK++T+ KDPQS+AAKNRRER
Sbjct: 169 SRHESTSPKLAGNKRPFTGENT-QLSKKP-SSGTNGKIKPKATTSPKDPQSLAAKNRRER 228

Query: 216 ISERLKILQELVPNGS----------------------KILATDEFWPVQGGKAPDISQV 259
           ISERLK+LQELVPNG+                      K+LA DEFWP QGGKAPDISQV
Sbjct: 229 ISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFWPAQGGKAPDISQV 288

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BLAST of CmoCh04G024010 vs. ExPASy Swiss-Prot
Match: Q9C707 (Transcription factor RHD6 OS=Arabidopsis thaliana OX=3702 GN=RHD6 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-27
Identity = 83/164 (50.61%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 118 SPKENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAA 177
           SP+  +   G   DWLYS+++ V+   +    + + A  KR H GES  +   K+ ++  
Sbjct: 134 SPRSTETPQGQ-KDWLYSDSTVVTTGSRNESLSPKSAGNKRSHTGES--TQPSKKLSSGV 193

Query: 178 AKKQKPKSSTA-KDPQSIAAKNRRERISERLKILQELVPNGS------------------ 237
             K KPK +T+ KDPQS+AAKNRRERISERLKILQELVPNG+                  
Sbjct: 194 TGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFL 253

Query: 238 ----KILATDEFWPVQGGKAPDISQVKEAIDAIL-SSQRERSSS 258
               K+LATDEFWP QGGKAPDISQVK+AIDAIL SSQR+R+S+
Sbjct: 254 QVQVKVLATDEFWPAQGGKAPDISQVKDAIDAILSSSQRDRNSN 294

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BLAST of CmoCh04G024010 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.5e-05
Identity = 23/33 (69.70%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 188 AKDPQSIAAKNRRERISERLKILQELVPNGSKI 221
           +KDPQS+AA++RRERISER++ILQ LVP G+K+
Sbjct: 129 SKDPQSVAARHRRERISERIRILQRLVPGGTKM 161

[Close]

BLAST of CmoCh04G024010 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.5e-05
Identity = 23/33 (69.70%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 188 AKDPQSIAAKNRRERISERLKILQELVPNGSKI 221
           +KDPQS+AA++RRERISER++ILQ LVP G+K+
Sbjct: 126 SKDPQSVAARHRRERISERIRILQRLVPGGTKM 158

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BLAST of CmoCh04G024010 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.3e-04
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 180 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKI 221
           K +     A DPQS+ A+ RRERI+ERL+ILQ LVPNG+K+
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV 276

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BLAST of CmoCh04G024010 vs. ExPASy TrEMBL
Match: A0A6J1HFA4 (putative transcription factor bHLH086 OS=Cucurbita moschata OX=3662 GN=LOC111463706 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.1e-138
Identity = 262/284 (92.25%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60
           MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60

Query: 61  HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120
           HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK
Sbjct: 61  HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120

Query: 121 ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK 180
           ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK
Sbjct: 121 ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK 180

Query: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS---------------------- 240
           QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS                      
Sbjct: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240

Query: 241 KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 263
           KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK
Sbjct: 241 KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 284

[Close]

BLAST of CmoCh04G024010 vs. ExPASy TrEMBL
Match: A0A6J1JPE9 (putative transcription factor bHLH086 OS=Cucurbita maxima OX=3661 GN=LOC111487700 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 5.9e-133
Identity = 253/284 (89.08%), Postives = 257/284 (90.49%), Query Frame = 0


Query: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60
           MALANSSVHEADGMDKAGGYIKS+PIATHDTPNATFLFRNTTNYQLDHH   QQQQQQLP
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSLPIATHDTPNATFLFRNTTNYQLDHH---QQQQQQLP 60

Query: 61  HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120
            SLINFKCGID+IFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK
Sbjct: 61  QSLINFKCGIDNIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120

Query: 121 ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK 180
           ENKNGDGSVYDWLYSEA+GVSD IQEAEGAHE+ANQKRPHMGESSGSVSKKQCTAAAAKK
Sbjct: 121 ENKNGDGSVYDWLYSEATGVSDGIQEAEGAHEIANQKRPHMGESSGSVSKKQCTAAAAKK 180

Query: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS---------------------- 240
           QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS                      
Sbjct: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240

Query: 241 KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 263
           KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK
Sbjct: 241 KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 281

[Close]

BLAST of CmoCh04G024010 vs. ExPASy TrEMBL
Match: A0A5D3DS91 (Putative transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002830 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 4.5e-80
Identity = 192/277 (69.31%), Postives = 213/277 (76.90%), Query Frame = 0


Query: 1   MALANSSVHEADGMDK-AGGYIKSIPIAT-HD-TPNATFLFRNTTNYQLDHHQQQQQQQQ 60
           M+LANS++ E DGM+K  GGY+KS+ I   HD  PN  F+FR+ TNYQL   QQQ     
Sbjct: 1   MSLANSAIQEVDGMEKNGGGYLKSLAIGKGHDQNPNGDFVFRDATNYQLGLQQQQ----- 60

Query: 61  QLPHSLINFKCGIDSIFHK-NNESLLSFEPQGVCQ--DTYNWDDHQRLMEDPNCFQTAT- 120
               SLINF        HK NNESLLSFE QG+CQ   TYNWDD +R+MEDPNCFQTAT 
Sbjct: 61  ----SLINFG-------HKMNNESLLSFEAQGICQLDLTYNWDDQERVMEDPNCFQTATS 120

Query: 121 -NGYSSPKE---NKNGD-GSVYDWLYSEA-SGVSDAIQEAEGAHE-VANQKRPH-MGESS 180
            N YS  K+   NKNG+ GSVY+WLY E+ +  SD+IQ+AEG  E V N KR H  GESS
Sbjct: 121 HNNYSPSKDHHHNKNGNSGSVYEWLYCESTTDFSDSIQDAEGTQEIVPNHKRSHSTGESS 180

Query: 181 GSVSKKQCTAAAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKILATDE 240
           GSV KKQCT AA KKQKPKS+TAKDPQSIAAKNRRERISERLKILQELVPNGSKILATDE
Sbjct: 181 GSVCKKQCT-AAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKILATDE 240

Query: 241 FWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 263
           FWPVQGGKAPDISQVKEAID ILSSQRERSSSSN++K
Sbjct: 241 FWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNTEK 260

[Close]

BLAST of CmoCh04G024010 vs. ExPASy TrEMBL
Match: A0A0A0KN55 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420280 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 4.5e-80
Identity = 198/301 (65.78%), Postives = 214/301 (71.10%), Query Frame = 0


Query: 1   MALANSSVHEADGMDK-AGGYIKSIPIA---THDTPNATFLFRNTTNYQLDHHQQQQQQQ 60
           MALANS++ E DGM+K  GGY+KS+ I     H  PN  F+FR+TTNYQL   QQQ    
Sbjct: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQ---- 60

Query: 61  QQLPHSLINFKCGIDSIFHK-NNESLLSFEPQGVCQ--DTYNWDDHQRLMEDPNCFQTAT 120
                SLINF        HK NNESLLSFE QG+CQ   TYNWDD QR+MEDPNCFQTAT
Sbjct: 61  -----SLINFG-------HKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTAT 120

Query: 121 --NGYSSPKE----NKNGD-GSVYDWLYSEA-SGVSDAIQEAEGAHE-VANQKRPH-MGE 180
             N YS  K+    NKNGD GSVY+WLYSE+ +  SD+IQEAEG  E V N KR H  GE
Sbjct: 121 NHNNYSPSKDHHHHNKNGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGE 180

Query: 181 SSGSVSKKQCTAAAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS----- 240
           SSGSV KKQCT AA KKQKPKS+TAKDPQSIAAKNRRERISERLKILQELVPNGS     
Sbjct: 181 SSGSVCKKQCT-AAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLV 240

Query: 241 -----------------KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQ 263
                            KILATDEFWPVQGGKAPDISQVKEAID ILSSQRERSSSSNS+
Sbjct: 241 TMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSE 284

[Close]

BLAST of CmoCh04G024010 vs. ExPASy TrEMBL
Match: A0A1S3CCR8 (putative transcription factor bHLH086 OS=Cucumis melo OX=3656 GN=LOC103499318 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 3.0e-76
Identity = 192/299 (64.21%), Postives = 213/299 (71.24%), Query Frame = 0


Query: 1   MALANSSVHEADGMDK-AGGYIKSIPIAT-HD-TPNATFLFRNTTNYQLDHHQQQQQQQQ 60
           M+LANS++ E DGM+K  GGY+KS+ I   HD  PN  F+FR+ TNYQL   QQQ     
Sbjct: 1   MSLANSAIQEVDGMEKNGGGYLKSLAIGKGHDQNPNGDFVFRDATNYQLGLQQQQ----- 60

Query: 61  QLPHSLINFKCGIDSIFHK-NNESLLSFEPQGVCQ--DTYNWDDHQRLMEDPNCFQTAT- 120
               SLINF        HK NNESLLSFE QG+CQ   TYNWDD +R+MEDPNCFQTAT 
Sbjct: 61  ----SLINFG-------HKMNNESLLSFEAQGICQLDLTYNWDDQERVMEDPNCFQTATS 120

Query: 121 -NGYSSPKE---NKNGD-GSVYDWLYSEA-SGVSDAIQEAEGAHE-VANQKRPH-MGESS 180
            N YS  K+   NKNG+ GSVY+WLY E+ +  SD+IQ+AEG  E V N KR H  GESS
Sbjct: 121 HNNYSPSKDHHHNKNGNSGSVYEWLYCESTTDFSDSIQDAEGTQEIVPNHKRSHSTGESS 180

Query: 181 GSVSKKQCTAAAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS------- 240
           GSV KKQCT AA KKQKPKS+TAKDPQSIAAKNRRERISERLKILQELVPNGS       
Sbjct: 181 GSVCKKQCT-AAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM 240

Query: 241 ---------------KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 263
                          KILATDEFWPVQGGKAPDISQVKEAID ILSSQRERSSSSN++K
Sbjct: 241 LEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNTEK 282

[Close]

BLAST of CmoCh04G024010 vs. NCBI nr
Match: XP_022963447.1 (putative transcription factor bHLH086 [Cucurbita moschata])

HSP 1 Score: 501.5 bits (1290), Expect = 4.4e-138
Identity = 262/284 (92.25%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60
           MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60

Query: 61  HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120
           HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK
Sbjct: 61  HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120

Query: 121 ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK 180
           ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK
Sbjct: 121 ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK 180

Query: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS---------------------- 240
           QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS                      
Sbjct: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240

Query: 241 KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 263
           KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK
Sbjct: 241 KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 284

[Close]

BLAST of CmoCh04G024010 vs. NCBI nr
Match: KAG6602034.1 (putative transcription factor basic helix-loop-helix 86, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 488.4 bits (1256), Expect = 3.8e-134
Identity = 258/284 (90.85%), Postives = 258/284 (90.85%), Query Frame = 0


Query: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60
           MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHH   QQQQQQLP
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHH---QQQQQQLP 60

Query: 61  HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120
            SLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK
Sbjct: 61  QSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120

Query: 121 ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK 180
           ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK
Sbjct: 121 ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK 180

Query: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS---------------------- 240
           QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS                      
Sbjct: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240

Query: 241 KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 263
           KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK
Sbjct: 241 KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 281

[Close]

BLAST of CmoCh04G024010 vs. NCBI nr
Match: KAG7032728.1 (putative transcription factor bHLH-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 488.0 bits (1255), Expect = 5.0e-134
Identity = 253/262 (96.56%), Postives = 253/262 (96.56%), Query Frame = 0


Query: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60
           MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60

Query: 61  HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120
           HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK
Sbjct: 61  HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120

Query: 121 ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK 180
           ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHE         GESSGSVSKKQCTAAAAKK
Sbjct: 121 ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHE---------GESSGSVSKKQCTAAAAKK 180

Query: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKILATDEFWPVQGGKAPDISQV 240
           QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKILATDEFWPVQGGKAPDISQV
Sbjct: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKILATDEFWPVQGGKAPDISQV 240

Query: 241 KEAIDAILSSQRERSSSSNSQK 263
           KEAIDAILSSQRERSSSSNSQK
Sbjct: 241 KEAIDAILSSQRERSSSSNSQK 253

[Close]

BLAST of CmoCh04G024010 vs. NCBI nr
Match: XP_022990966.1 (putative transcription factor bHLH086 [Cucurbita maxima])

HSP 1 Score: 483.4 bits (1243), Expect = 1.2e-132
Identity = 253/284 (89.08%), Postives = 257/284 (90.49%), Query Frame = 0


Query: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60
           MALANSSVHEADGMDKAGGYIKS+PIATHDTPNATFLFRNTTNYQLDHH   QQQQQQLP
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSLPIATHDTPNATFLFRNTTNYQLDHH---QQQQQQLP 60

Query: 61  HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120
            SLINFKCGID+IFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK
Sbjct: 61  QSLINFKCGIDNIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120

Query: 121 ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK 180
           ENKNGDGSVYDWLYSEA+GVSD IQEAEGAHE+ANQKRPHMGESSGSVSKKQCTAAAAKK
Sbjct: 121 ENKNGDGSVYDWLYSEATGVSDGIQEAEGAHEIANQKRPHMGESSGSVSKKQCTAAAAKK 180

Query: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS---------------------- 240
           QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS                      
Sbjct: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240

Query: 241 KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 263
           KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK
Sbjct: 241 KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 281

[Close]

BLAST of CmoCh04G024010 vs. NCBI nr
Match: XP_023528222.1 (putative transcription factor bHLH086 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 477.2 bits (1227), Expect = 8.8e-131
Identity = 252/284 (88.73%), Postives = 254/284 (89.44%), Query Frame = 0


Query: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQQQQQLP 60
           MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHH    QQQQQLP
Sbjct: 1   MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHH----QQQQQLP 60

Query: 61  HSLINFKCGIDSIFHKNNESLLSFEPQGVCQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120
            SLINFKCGID+IFHKNNESLLSFEPQGV QDTYNWDDHQRLMEDPNCFQTATNGYSSPK
Sbjct: 61  QSLINFKCGIDNIFHKNNESLLSFEPQGVGQDTYNWDDHQRLMEDPNCFQTATNGYSSPK 120

Query: 121 ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKK 180
           ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHE+ANQKRPHMGESSGSVSKKQCT  AAKK
Sbjct: 121 ENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEIANQKRPHMGESSGSVSKKQCTTVAAKK 180

Query: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS---------------------- 240
           QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGS                      
Sbjct: 181 QKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240

Query: 241 KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 263
           KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK
Sbjct: 241 KILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 280

[Close]

BLAST of CmoCh04G024010 vs. TAIR 10
Match: AT5G37800.1 (RHD SIX-LIKE 1 )

HSP 1 Score: 128.6 bits (322), Expect = 7.1e-30
Identity = 92/198 (46.46%), Postives = 121/198 (61.11%), Query Frame = 0


Query: 96  WDDHQ------RLMEDPNCFQT------ATNGYSSPKENKNGDGSVYDWLYSEASGVSDA 155
           W  HQ      R+++ PN F+T       +N  S P  N +G+G   DWLYS ++ V+  
Sbjct: 109 WSHHQVDSISPRVIKTPNSFETTSSFGLTSNSMSKPATN-HGNG---DWLYSGSTIVNIG 168

Query: 156 IQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAAAKKQKPKSSTA-KDPQSIAAKNRRER 215
            +    + ++A  KRP  GE++  +SKK  ++    K KPK++T+ KDPQS+AAKNRRER
Sbjct: 169 SRHESTSPKLAGNKRPFTGENT-QLSKKP-SSGTNGKIKPKATTSPKDPQSLAAKNRRER 228

Query: 216 ISERLKILQELVPNGS----------------------KILATDEFWPVQGGKAPDISQV 259
           ISERLK+LQELVPNG+                      K+LA DEFWP QGGKAPDISQV
Sbjct: 229 ISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFWPAQGGKAPDISQV 288

[Close]

BLAST of CmoCh04G024010 vs. TAIR 10
Match: AT1G66470.1 (ROOT HAIR DEFECTIVE6 )

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-28
Identity = 83/164 (50.61%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 118 SPKENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEVANQKRPHMGESSGSVSKKQCTAAA 177
           SP+  +   G   DWLYS+++ V+   +    + + A  KR H GES  +   K+ ++  
Sbjct: 134 SPRSTETPQGQ-KDWLYSDSTVVTTGSRNESLSPKSAGNKRSHTGES--TQPSKKLSSGV 193

Query: 178 AKKQKPKSSTA-KDPQSIAAKNRRERISERLKILQELVPNGS------------------ 237
             K KPK +T+ KDPQS+AAKNRRERISERLKILQELVPNG+                  
Sbjct: 194 TGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFL 253

Query: 238 ----KILATDEFWPVQGGKAPDISQVKEAIDAIL-SSQRERSSS 258
               K+LATDEFWP QGGKAPDISQVK+AIDAIL SSQR+R+S+
Sbjct: 254 QVQVKVLATDEFWPAQGGKAPDISQVKDAIDAILSSSQRDRNSN 294

[Close]

BLAST of CmoCh04G024010 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 3.2e-06
Identity = 23/33 (69.70%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 188 AKDPQSIAAKNRRERISERLKILQELVPNGSKI 221
           +KDPQS+AA++RRERISER++ILQ LVP G+K+
Sbjct: 126 SKDPQSVAARHRRERISERIRILQRLVPGGTKM 158

[Close]

BLAST of CmoCh04G024010 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 3.2e-06
Identity = 23/33 (69.70%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 188 AKDPQSIAAKNRRERISERLKILQELVPNGSKI 221
           +KDPQS+AA++RRERISER++ILQ LVP G+K+
Sbjct: 129 SKDPQSVAARHRRERISERIRILQRLVPGGTKM 161

[Close]

BLAST of CmoCh04G024010 vs. TAIR 10
Match: AT2G14760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 180 KQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKI 221
           K +     A DPQS+ A+ RRERI+ERL+ILQ LVPNG+K+
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV 276

The following BLAST results are available for this feature:

BLAST of CmoCh04G024010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ00	1.0e-28	46.46	Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=RSL1 PE...	[more]
Q9C707	1.9e-27	50.61	Transcription factor RHD6 OS=Arabidopsis thaliana OX=3702 GN=RHD6 PE=1 SV=1	[more]
Q9FHA7	4.5e-05	69.70	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9SND4	4.5e-05	69.70	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q7XHI9	2.3e-04	58.54	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]

BLAST of CmoCh04G024010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFA4	2.1e-138	92.25	putative transcription factor bHLH086 OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A6J1JPE9	5.9e-133	89.08	putative transcription factor bHLH086 OS=Cucurbita maxima OX=3661 GN=LOC11148770...	[more]
A0A5D3DS91	4.5e-80	69.31	Putative transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0KN55	4.5e-80	65.78	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G420280 PE=4 S...	[more]
A0A1S3CCR8	3.0e-76	64.21	putative transcription factor bHLH086 OS=Cucumis melo OX=3656 GN=LOC103499318 PE...	[more]

BLAST of CmoCh04G024010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963447.1	4.4e-138	92.25	putative transcription factor bHLH086 [Cucurbita moschata]	[more]
KAG6602034.1	3.8e-134	90.85	putative transcription factor basic helix-loop-helix 86, partial [Cucurbita argy...	[more]
KAG7032728.1	5.0e-134	96.56	putative transcription factor bHLH-like protein, partial [Cucurbita argyrosperma...	[more]
XP_022990966.1	1.2e-132	89.08	putative transcription factor bHLH086 [Cucurbita maxima]	[more]
XP_023528222.1	8.8e-131	88.73	putative transcription factor bHLH086 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh04G024010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37800.1	7.1e-30	46.46	RHD SIX-LIKE 1	[more]
AT1G66470.1	1.3e-28	50.61	ROOT HAIR DEFECTIVE6	[more]
AT3G50330.1	3.2e-06	69.70	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	3.2e-06	69.70	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G14760.1	1.6e-05	58.54	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..174
None	No IPR available	PANTHER	PTHR16223:SF9	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 47..220
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 47..220
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 187..250 score: 11.11527
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 185..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G024010.1	CmoCh04G024010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding