CmoCh04G023900 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G023900
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionEukaryotic translation initiation factor 3 subunit J
LocationCmo_Chr04: 17812896 .. 17818680 (-)
RNA-Seq ExpressionCmoCh04G023900
SyntenyCmoCh04G023900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGACTGGGGTAATGCTATATGGTTTACGTTTTAGTCCATCATTGTTCACCTTTGCTGATTGAATAAGTAACGAGTCTCTATACAAAAAATGTTGTATATGGATATATGTTGGTCATTCCATCAATAATTTACCTCTGATTATTATTATTATCATCATCATCATTATATATTATATGTAGCCTATTATTAGTACATAAAATAACACAACACTTGAAAATGAGTATGGAATGGATGAGAATAAGCTTAATAGTGCAGGACTTAAGTACGACAAGGACACTACAAATAAATAATAAAAGGATGTATGTGTATGTTCTAAAGCTTCCTATTAAACACTGGTTGTGGTTTGAGAGACTGTAGATAGTGGCACGAGAGTTCATGTTTTATTAGCAAAGGAGCCGAGGAATAGATCTAATTTTGAGTTCAACTTCAAAGGAGTAGACGTTACAGGACAAGACAATCCATAGTTGTGGATGTGTTTTGAAGTTAGGTCTTGGTCATTCATTGCAAAAACACTTAACTGAACGGATGTAAATGCTTTCAAACATCACGTATCATTACTTTATCAGTTCTTATTGTTCTATATGCCCCAACACATCTGGAGTTCAAGAAAAAGTCATCTTAATGAAAATATCGAAGGATCCAGATGATGTGCTGTACATCAGTGCATTTTTTAGATGTGTTCATTTTGCATTAGTGCCTGATTTTATAACTCCAATGAATATGGTGTGCCTCTTTCTGAAGGGATATGCATGCGTAATTTCTTTAATTAAAGAGTGCTTCGTATTCATCTCCACTGTATTCTGTTGATATTGTATTTTTTGGTTCCTAAGGTTGTTAAAATTTGTAGTATTGCATTTTCTTGTCTAGTAGTATCTCAAATGACTCTGCTTCCCAAAACATGATAAATGAATTGCCCTATTGCTATGTTTTTATTCTTATCTTTTTAAATAAACACAAAATTTCATTAAAATTATTTCATCTTCTTTTTATTTTATTTGTTTAATACTTTGGAGGGGGGAGGCAATTATTGTGCCTTCCTTTCAAGTAGCTTGTTTGACAGTATGGAAGAATATTGTGGTGGTTCCACTATAATGATCAAAACTACTCAGTTTGAGCGAGAGTGGGAGAAGTGTGGAGCTAACCACTCTGTCATGTGGCAAAGGATAAGGAGAGTTGCGATTAGTTTTTTGACGAACTATAAATCCTTACCACTTCTCTCCACGGCTGATTTAATTGAATGTCTTTAAAGATTGAAAATAAGAATCGAATCCCTTTATATGTAACCTATTTGGAAATTTTAGTCATTATGTCATACAAATAATACAATGTTGTGTACAGTATACGGTAAATATCAAGTAAAAAATTCTTGAACTACAGTCTAGCAAACATGTTTAATGTTAAATTACAAATTGGATCCCTATGGTATTAAATGTTAGAATTAGTCCCTATGAGAGTTTTATTAAACCATAAGGACTAAATTTCAACTCAATTACCATAGGGATCGAGTTTGCAATTTAACCGATGTATAATATGATTTTTGAGGACAAGACATGGTGTTGGTTTTTGCATTCTGTGGAAAGAAGTTCTCTATTCTTAACGTAGCCCGTTGTGTCTCATGACTTGTTATAATCTTCCACGATATTGGAAAATATTTTACAGTTTAATTAGCTGTTCTGCTCAGGCATTGAATAACTTTTTCTTAGCTTGAGAATGGAGATACCTATAGCAAATTTAGCTTTCTTTCTCGAGTTTCTGTGTACGTTGTTTACCTGATCATTGAGGCATAAAAGCGTACATATGGTATAGTCATATGTAGTTCCATATTTATTCTTGCTCTTAATTTTGTGACTCTAAGTTTAATCATCTAGGTGGGTTTGCTTACATATGTATATGTTTTCTTTTAGAGGATGAAAACATAACCCCACTCCAGAAGGAGCAGCCGAAGAATAAATGGGATGATGAGGATGTGGATGACGATGATGTGAAGGAATCTTGGGAGGATGATGATGAACCTGCACCGGTGAGAATTTATTGATTTTCTTGCTAATGATGTTTGTTTCATTTAGTATTGATGTTAAGACTGAAGATAATGCCGAAGGAGAATTTGGGTGATTCTTACTGATCACTACAGACTGCTAAGGGTCTAAACCACTCCAATGTTTTAATATTGTGGTGAATTGTTCATTCTAAGGGTAGAAATCATTAGTAGTTGTAGGAAGCTTTTTTAATATTCCTAAAACTGGCGGAAACGGAAGTCCCTTTTCCTTTATTTTGAAAGTTTGTGGAGCTCATGTAGAAACTACATTTTTGTTAAGGTTGGGGTTGGCATCAGTACATGGTTTTGAGAAGATGAATGGTTCAGAGCATGTAATATCTAATAAATCTCTAACTCTTTAGCTTGAGTAGCTCGTCCATTGCCTGATGTATCTGTAAATTTGTTACCCCATTTCTTCTTGTCTTTTTGGTCTCACAGGCTCCAGTAGTTAAGCCTCCTCCAGAAGCCGCCTCAAAGAAACCTGCTGCAAAAACCATTGAAAAAAAAGGAAAAACTGCCGAGGTGGAACCTGAACAGCCTCTAGATCCATTAGCCGAGAAACTTCGCCAACAAAGGTAATATTAGTTTGCTTTGGTTTTTTGGAACTCTTAGCTCAACTTATATCTACTTATGGTTCTCTGGAATGAAAATAATTGAAGCAGGAATTTGAACTTAAACATTTTATGAATTCTTTTATTGTGACGGGAGAATGATCCTTCCTACCAATGTTGTGTAGAGAAAGTAGGACATTGGAGCAACTATTTTGAATTTTCTTTTTATGCTATCTTGTCCATTCCAGATCTCTTTTTATCGCAGAATTATCTCTTACTCCATACTTCTCTTCTGAAATCAGGCACCATTCCTGTTAACAATAAATGAGAAAAGGCATTCTATTTGTTTTAGAGTTATCTCCACTTTCAATGTTTATTCAGGGCAATTACGGGTTTTTGGAATAAATGTTCAAGTTAATTTTGGGAGGAATATGGAAAGCTATTTTCTCATTAAAGAAAAAGTTGGGAACTGTTTGTTTGTTCTGTTCTGTCTACATTTTGTGCAAGTGTCATCAAACAGAACTAGATGACTGGTTTAATAATTAATGGCCCCTTTTTTAAAGCATAAATAATGGTCCAATACTTGGGACTTCTCATTGAATATAAATCTTTGAATTATGAATGTTATGCTCTTTACGATCTAGGTTGATTATGAGCGTTTGATTTACTTCATACTGATTTAGGAGAAGTTATAAAGAACTATGAGAGATTTCTTATGGAAGAAGTTGCATTTGGTGTGATAAGGATGGTATAGGATTGGAAATTTGGGTTGTGAAAATATTGCCCACTTTTTATATGCTTATGGTAGTTTCCCTTTGAAACTTAAGACTCGGTGGTACCAAGTAATTACAAGGGCACATTTGTTTACTTAATTTTTGGATAGGGATTCACTCCTATGGTTGGATTTGGATCAGGGAAACCCATAGGTGGTATCTAATTGTCTTTTGGTTTTCTTGTTTCTTATTATGTCTTTTGAGCAAGATGGTTCTAGAGTTCCCTTTTGGTGTATGTTTGGCCTAAATAGAACCTACCATTTCCCTTTTGTATTCTATAGCCATTTAAAAAAATGCCTTGTGAGGAGTCACCTCGCTCTGATATATGTTTATGTCGATTCTTTCTCGGTCTTGACATTTGCAAGTTAGCTTTATTCCTTCATATAATCCAAAATGTTGGGCATCTTTTAAGTGCAATGTGGCCTATATTGCCCCTTTTGGAACCTATACTGCCCTTTGTGCTATTAAGGAGTCAGGAGGAAGTTTGTTAACTGTGGACTATGAGGTTGAGGACAATTCTCCATTATTTCGCTCTATATGAGTTGTTAGTTGGTCCTTACTTGCATGTGGAGGATGGATTGCAGACGCCCTTATCCTTGGAGAAGGTTAAAAGGGTGGTTTTGGGTGGTTTTTCTTAGGCTTCTTCCAAGACAATTGGGAGATAGGAAGGATCTTTGGAAATTCGTTAACAAATTCTACTTCAACAAAACCTTTGTTGCCTTATCCTGATAAGGCAACAAAGGTTAAGGACTTTAGACTAGTCTTATTACCTGTGTGTATAAGATTATCTCCAAGATCCTTGCTAAAAAGCGTAATCTTATATCCAAGATCCTTGCTAACAAGCTTACAAAGGTCCCTGCCTCAACGATCTCCCACATTAGAGGGTCTTTCTTGCTGGCAGGTATATCTTAGAACAGGGCAGTGAGGATTATAGAGCTCAAAAGAAAGGTCATCTTTAAGATCGACCGGGAGAAAGCCTACCATCACCTAGATTTGGTCTTTTTAGATAAGGTGATGGAGAACGGGAGACAAGGAATTTAAAATTAACTGACATAAAAGAAATTTGAAGGTGATACCCGCTGAGGCAAGTCAAAATGACTTACAAAAAATATGTAAGTTTTGAAAAGTAGCATTTAAAATAATAAAAAAATGTCAAGGAAGACGACTTGATCTGAAGGGCATTTTCTGCAGCTGCGTGGTCTACACTCCATTTGAGAAAAAATAAAATAACATGGAACGAGATAAATACTCAATAAACAATGTAGGTTTTCGTCGTACTTATACTTTATAACATATACTTAGGCAATGTGTTCAACTATAATCCTTGGCCAATAACTTGGCTCTTGTCTATTCTTGTTGTATAAGGCTTATGCATACATTCTTCTATACACTTCCACTCTAGGAGCGTATACTTATTAGGCTCTAAAGTAAGCTTTAGTTTACTTGGCCCTTGTAACAGGCTTTAAGTACAAGACCCTTATGTTGCACTTTGAGATACATGGCCCTTATGATGGACTTTGAAATATGTGGCCCTTATGAAGGGCTCTAAATTACATGGCTCTTATGACGGTCTCTAAGATACGGGGACTTTATGAAGGGCTCTGAGATTTAACCTAAGCCCTTTCCATGGGGTATGTGCTATTTTGTGGGGGAATGAAACAACAAAATCATTAGAGGGCACTAGAGTTCCTTCAGCGATGTTTGGTTCCTTGTTATATTTTTTGTTTCTCTTTGAGCCTATATTTTTAGTCTCTTTTTTAATTATTTACTTGGTTTTATTTCTCTTGACGGGAAGCCCTTTTTTTGTACTGTGGCTCCTTTTTGTGGGCCTCTTCTTTTCTAGATGCCCGTATATTCTTTCATTTTTTCTCATGAAAGTAAGTTTTTCTGTTAAAAAAATACAAAGAGCTTCTATTTGTCTTTGGCTGGAACTAGGGGTATACTTTATATAAGATCTTAATCACGTGCTGGGGCTTTGTTTTTTGTTTCCAAATTGTGGCTGGCAGGTTAGTGGAAGAAGCAGATTATAAGTCCACTACCGATTTGTTTAAAAAGAGTGGTGATGAGAAGACTCTTGATAATTTCATTCCAAAATCAGATAGTGACTTCTTGGAATATGCAGAGCTGATCTCTCATAAACTTCGCCCCTATGAGGTTTATACAATTTACCTCTATCATTGTTTCTGCCCATCAATGTATGAGCATAGCTTATTCTCACGAGTTTCCCCCAAAAAATTATTGTTGCAGAAAAGTTTCCATTATATTAATCTGCTCAAAGACGTCATTAGACTATCGATGACCTCTTTGAAAGCAGCGGATGCGAAAGAAGTTGCCTCTTCTGTCACTGCACTTGCCAATGAAAAACTAAAGGCGGAGAAGGATACCAGTAAAAAGAAAACGGGTAGGTGTTTACATTTATAA

mRNA sequence

ATGGATGACTGGGAGGATGAAAACATAACCCCACTCCAGAAGGAGCAGCCGAAGAATAAATGGGATGATGAGGATGTGGATGACGATGATGTGAAGGAATCTTGGGAGGATGATGATGAACCTGCACCGGCTCCAGTAGTTAAGCCTCCTCCAGAAGCCGCCTCAAAGAAACCTGCTGCAAAAACCATTGAAAAAAAAGGAAAAACTGCCGAGGTGGAACCTGAACAGCCTCTAGATCCATTAGCCGAGAAACTTCGCCAACAAAGGTTAGTGGAAGAAGCAGATTATAAGTCCACTACCGATTTGTTTAAAAAGAGTGGTGATGAGAAGACTCTTGATAATTTCATTCCAAAATCAGATAGTGACTTCTTGGAATATGCAGAGCTGATCTCTCATAAACTTCGCCCCTATGAGAAAAGTTTCCATTATATTAATCTGCTCAAAGACGTCATTAGACTATCGATGACCTCTTTGAAAGCAGCGGATGCGAAAGAAGTTGCCTCTTCTGTCACTGCACTTGCCAATGAAAAACTAAAGGCGGAGAAGGATACCAGTAAAAAGAAAACGGGTAGGTGTTTACATTTATAA

Coding sequence (CDS)

ATGGATGACTGGGAGGATGAAAACATAACCCCACTCCAGAAGGAGCAGCCGAAGAATAAATGGGATGATGAGGATGTGGATGACGATGATGTGAAGGAATCTTGGGAGGATGATGATGAACCTGCACCGGCTCCAGTAGTTAAGCCTCCTCCAGAAGCCGCCTCAAAGAAACCTGCTGCAAAAACCATTGAAAAAAAAGGAAAAACTGCCGAGGTGGAACCTGAACAGCCTCTAGATCCATTAGCCGAGAAACTTCGCCAACAAAGGTTAGTGGAAGAAGCAGATTATAAGTCCACTACCGATTTGTTTAAAAAGAGTGGTGATGAGAAGACTCTTGATAATTTCATTCCAAAATCAGATAGTGACTTCTTGGAATATGCAGAGCTGATCTCTCATAAACTTCGCCCCTATGAGAAAAGTTTCCATTATATTAATCTGCTCAAAGACGTCATTAGACTATCGATGACCTCTTTGAAAGCAGCGGATGCGAAAGAAGTTGCCTCTTCTGTCACTGCACTTGCCAATGAAAAACTAAAGGCGGAGAAGGATACCAGTAAAAAGAAAACGGGTAGGTGTTTACATTTATAA

Protein sequence

MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAAKTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKAEKDTSKKKTGRCLHL
Homology
[Close]
BLAST of CmoCh04G023900 vs. ExPASy Swiss-Prot
Match: B4KTH6 (Eukaryotic translation initiation factor 3 subunit J OS=Drosophila mojavensis OX=7230 GN=eIF3j PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-17
Identity = 77/202 (38.12%), Postives = 109/202 (53.96%), Query Frame = 0 

Query: 2   DDWE----DENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDE--------PAPAPVVKP 61
           DDWE     E +         NKW+ ED DD+DVKESWED++E           APV   
Sbjct: 3   DDWESAADSEIVIRPNAANNINKWEGED-DDEDVKESWEDEEEKKDEEKPTKTEAPVKTK 62

Query: 62  PPEAASKK----PAAKTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKK 121
           P +A   K       K  E++ + AE+ PE   + LAEKLR Q++ EE+D KS  + F  
Sbjct: 63  PNKALKAKLEEQERLKEEEEQKRLAEMTPE---EKLAEKLRLQKIQEESDLKSALETFGV 122

Query: 122 SGDEKTLDNFIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKE 181
           +     LD F P+S  +F E+   +S K+  Y +S H+   ++D++R    +L AAD K+
Sbjct: 123 TSIGGGLDAFNPESKEEFKEFGATLSWKVAQYRESIHFPQFIEDLVRSLCCNLSAADIKK 182

Query: 182 VASSVTALANEKLKAEKDTSKK 188
           V  SV +L +EKLK EK  +KK
Sbjct: 183 VKMSVESLHSEKLKMEKAAAKK 200

[Close]
BLAST of CmoCh04G023900 vs. ExPASy Swiss-Prot
Match: B4MP81 (Eukaryotic translation initiation factor 3 subunit J OS=Drosophila willistoni OX=7260 GN=eIF3j PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 8.6e-17
Identity = 76/207 (36.71%), Postives = 114/207 (55.07%), Query Frame = 0 

Query: 2   DDWE---DENITPLQKEQPK-NKWDDEDVDDDDVKESWEDDDE------PAPAPV-VKPP 61
           DDWE   D  +  L       NKW+ ED DD+DVKESWED++E      P    V VKP 
Sbjct: 3   DDWESAADSEVVILPNAANNINKWEGED-DDEDVKESWEDEEEKKDEEKPTKTEVPVKPK 62

Query: 62  PEAASKKPAAKTIEKKGKTAEVEPEQ------PLDPLAEKLRQQRLVEEADYKSTTDLFK 121
           P  A K      +E++ +  E E E+      P +  AEKLR +++ EE+D K T D F 
Sbjct: 63  PTRALK----AKLEEEERLREAEEEKRLANLTPEEKFAEKLRVKKMQEESDMKHTLDTFG 122

Query: 122 KSGDEKTLDNFIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAK 181
            +     L++F P+S  +F E+ + +S K+  +++S H+   ++D++R    +L AAD K
Sbjct: 123 VTSISGGLESFNPESKEEFKEFGDTLSWKVAQFKESPHFPQFVEDLVRSICVNLSAADIK 182

Query: 182 EVASSVTALANEKLKAEKDTSKKKTGR 192
           +V  +V  L +EKLK EK  +KK  G+
Sbjct: 183 KVKINVELLHSEKLKLEKANTKKPIGK 204

[Close]
BLAST of CmoCh04G023900 vs. ExPASy Swiss-Prot
Match: B4LN42 (Eukaryotic translation initiation factor 3 subunit J OS=Drosophila virilis OX=7244 GN=eIF3j PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 75/204 (36.76%), Postives = 107/204 (52.45%), Query Frame = 0 

Query: 2   DDWE----DENITPLQKEQPKNKWDDEDVDDDDVKESWEDD----DEPAPAPVVKPPPEA 61
           DDWE     E +         NKW+ ED DD+DVKESWED+    DE  P     P    
Sbjct: 3   DDWESAADSEIVIRPNATNNINKWEGED-DDEDVKESWEDEEEKKDEEKPTKTEAPVKTK 62

Query: 62  ASKKPAAKTIEKKGKTAEVEPEQPL------DPLAEKLRQQRLVEEADYKSTTDLFKKSG 121
            +K   AK +E++ +  E E  + L      + LAEKLR Q++ EE+D KS  D F  + 
Sbjct: 63  PNKALKAK-LEEQERLNEEEERKRLANMTAEEKLAEKLRLQKIQEESDLKSALDTFGVTS 122

Query: 122 DEKTLDNFIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVA 181
               LD F P+S  +F E+   +S K+  Y +S H+   ++D++R    +L AAD K+V 
Sbjct: 123 IGGGLDAFNPQSKEEFKEFGATLSWKVAQYRESVHFPEFIEDLVRSLCVNLSAADIKKVK 182

Query: 182 SSVTALANEKLKAEKDTSKKKTGR 192
            SV +L +EK K EK  +KK   +
Sbjct: 183 MSVESLHSEKQKMEKANAKKSAAK 204

[Close]
BLAST of CmoCh04G023900 vs. ExPASy Swiss-Prot
Match: B4J4E7 (Eukaryotic translation initiation factor 3 subunit J OS=Drosophila grimshawi OX=7222 GN=eIF3j PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.6e-15
Identity = 71/200 (35.50%), Postives = 108/200 (54.00%), Query Frame = 0 

Query: 2   DDWE----DENITPLQKEQPKNKWDDEDVDDDDVKESWEDD----DEPAPAPVVKPPPEA 61
           DDWE     + +         NKW+ ED DD+DVKESWED+    DE  P     P    
Sbjct: 3   DDWEFAADSKVVVKPNAANNINKWEGED-DDEDVKESWEDEEEKKDEEKPTKTEAPAKTK 62

Query: 62  ASKKPAAKTIEKKGKTAEVEPEQ-----PLDPLAEKLRQQRLVEEADYKSTTDLFKKSGD 121
            +K   AK +E++    E E ++       + LAEKLR Q++ EE+D KS  + F  +  
Sbjct: 63  PNKVLKAKLLEQECLEKEEEAKRLANMSTEEKLAEKLRLQKIQEESDLKSALETFGLTSI 122

Query: 122 EKTLDNFIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVAS 181
           +  LD+F P+S+ +F E+   +S K+  Y++S H+   ++D+++    +L  AD K+V  
Sbjct: 123 DGGLDSFNPQSNEEFKEFGATLSWKIAQYKESPHFPQFIEDLVQALCVNLSTADLKKVKM 182

Query: 182 SVTALANEKLKAEKDTSKKK 189
           SV  L +EKLK EK + K K
Sbjct: 183 SVEVLHSEKLKMEKVSVKNK 201

[Close]
BLAST of CmoCh04G023900 vs. ExPASy Swiss-Prot
Match: A7RSH7 (Eukaryotic translation initiation factor 3 subunit J OS=Nematostella vectensis OX=45351 GN=v1g240395 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-15
Identity = 75/212 (35.38%), Postives = 112/212 (52.83%), Query Frame = 0 

Query: 1   MDDWEDENITP--LQKEQPKNKWDDEDVDDDDVKESWEDDDE-----------PAPAPVV 60
           M DW+DE   P  +  +   +KW+ ED +DDD+KESW+DDDE            A AP  
Sbjct: 1   MADWDDEKFEPGEVPADGVTDKWEGED-EDDDIKESWDDDDEDEKKEDEAKNTEAAAPKK 60

Query: 61  KPP-PEAASKKPAAKTIEKKGKTAE---VEPEQ----PLDPLAEKLRQQRLVEEADYKST 120
           K    +   +K   K +E+K K  E   +E E     P + +AEKLR+Q++VEE+D    
Sbjct: 61  KKTLKQILKEKEEQKLLEEKRKAEEKQKLEEEDKELTPEEQMAEKLRRQKIVEESDLLVA 120

Query: 121 TDLFKKSGDEKT----LDNFIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSM 180
            D F     E+     LD+ IP +  +F EY++L+  KL  +E +  YI  L+  +R   
Sbjct: 121 MDTFGVGTQEEASRTGLDSMIPSTKEEFTEYSKLLVEKLTKFETNPEYIPFLEATLREIC 180

Query: 181 TSLKAADAKEVASSVTALANEKLKAEKDTSKK 188
            SL   D K+++S++  L +EKLKA+K    K
Sbjct: 181 VSLDPEDIKKLSSTLNMLQSEKLKAQKGKKAK 211

[Close]
BLAST of CmoCh04G023900 vs. ExPASy TrEMBL
Match: A0A6J1HJG3 (Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita moschata OX=3662 GN=LOC111464109 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 9.0e-94
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180

Query: 181 EKDTSKKKT 190
           EKDTSKKKT
Sbjct: 181 EKDTSKKKT 189

[Close]
BLAST of CmoCh04G023900 vs. ExPASy TrEMBL
Match: A0A6J1HHK4 (Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita moschata OX=3662 GN=LOC111464109 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 9.0e-94
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180

Query: 181 EKDTSKKKT 190
           EKDTSKKKT
Sbjct: 181 EKDTSKKKT 189

[Close]
BLAST of CmoCh04G023900 vs. ExPASy TrEMBL
Match: A0A6J1JS59 (Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita maxima OX=3661 GN=LOC111487853 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.5e-93
Identity = 187/189 (98.94%), Postives = 189/189 (100.00%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKT+EVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANE+LKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180

Query: 181 EKDTSKKKT 190
           EKDTSKKKT
Sbjct: 181 EKDTSKKKT 189

[Close]
BLAST of CmoCh04G023900 vs. ExPASy TrEMBL
Match: A0A6J1JVF0 (Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita maxima OX=3661 GN=LOC111487853 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.5e-93
Identity = 187/189 (98.94%), Postives = 189/189 (100.00%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKT+EVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANE+LKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180

Query: 181 EKDTSKKKT 190
           EKDTSKKKT
Sbjct: 181 EKDTSKKKT 189

[Close]
BLAST of CmoCh04G023900 vs. ExPASy TrEMBL
Match: A0A6J1K212 (Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita maxima OX=3661 GN=LOC111489417 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.8e-81
Identity = 169/191 (88.48%), Postives = 177/191 (92.67%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENI PLQKEQPKNKWDDEDVDD+DVKESWED+DEPAP PVVKPPPE A KKPAA
Sbjct: 1   MDDWEDENIPPLQKEQPKNKWDDEDVDDNDVKESWEDEDEPAPVPVVKPPPETAPKKPAA 60

Query: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KT EKK KT  VEP+QPLDPLAEKLRQQRLVEEADYKSTT+LF K GDEKTLDNFIPKS+
Sbjct: 61  KTTEKKAKTVVVEPKQPLDPLAEKLRQQRLVEEADYKSTTELFGKRGDEKTLDNFIPKSE 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKD +RLSMTSLKAADAKEVASSVTALANEKLKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDAMRLSMTSLKAADAKEVASSVTALANEKLKA 180

Query: 181 EKDTS--KKKT 190
           EK+ +  KKKT
Sbjct: 181 EKEANAGKKKT 191

[Close]
BLAST of CmoCh04G023900 vs. NCBI nr
Match: XP_022963973.1 (eukaryotic translation initiation factor 3 subunit J-like isoform X1 [Cucurbita moschata] >KAG7032718.1 Eukaryotic translation initiation factor 3 subunit J [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.8 bits (904), Expect = 1.9e-93
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180

Query: 181 EKDTSKKKT 190
           EKDTSKKKT
Sbjct: 181 EKDTSKKKT 189

[Close]
BLAST of CmoCh04G023900 vs. NCBI nr
Match: XP_022963981.1 (eukaryotic translation initiation factor 3 subunit J-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 352.8 bits (904), Expect = 1.9e-93
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180

Query: 181 EKDTSKKKT 190
           EKDTSKKKT
Sbjct: 181 EKDTSKKKT 189

[Close]
BLAST of CmoCh04G023900 vs. NCBI nr
Match: XP_023551688.1 (eukaryotic translation initiation factor 3 subunit J-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.9 bits (899), Expect = 7.1e-93
Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAA KKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAAPKKPAA 60

Query: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180

Query: 181 EKDTSKKKT 190
           EKDTSKKKT
Sbjct: 181 EKDTSKKKT 189

[Close]
BLAST of CmoCh04G023900 vs. NCBI nr
Match: XP_022991180.1 (eukaryotic translation initiation factor 3 subunit J-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 350.5 bits (898), Expect = 9.2e-93
Identity = 187/189 (98.94%), Postives = 189/189 (100.00%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKT+EVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANE+LKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180

Query: 181 EKDTSKKKT 190
           EKDTSKKKT
Sbjct: 181 EKDTSKKKT 189

[Close]
BLAST of CmoCh04G023900 vs. NCBI nr
Match: XP_022991178.1 (eukaryotic translation initiation factor 3 subunit J-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 350.5 bits (898), Expect = 9.2e-93
Identity = 187/189 (98.94%), Postives = 189/189 (100.00%), Query Frame = 0 

Query: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60
           MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA
Sbjct: 1   MDDWEDENITPLQKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPAA 60

Query: 61  KTIEKKGKTAEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120
           KTIEKKGKT+EVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD
Sbjct: 61  KTIEKKGKTSEVEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNFIPKSD 120

Query: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANEKLKA 180
           SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANE+LKA
Sbjct: 121 SDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALANERLKA 180

Query: 181 EKDTSKKKT 190
           EKDTSKKKT
Sbjct: 181 EKDTSKKKT 189

[Close]
BLAST of CmoCh04G023900 vs. TAIR 10
Match: AT1G66070.1 (Translation initiation factor eIF3 subunit )

HSP 1 Score: 229.2 bits (583), Expect = 2.9e-60
Identity = 128/199 (64.32%), Postives = 160/199 (80.40%), Query Frame = 0 

Query: 1   MDDWEDENITPL-QKEQPKNKWDDEDVDDDDVKESWE-DDDEPAPAPVVKPPPEAASKKP 60
           MDDWEDE I PL  K + K+ WDDEDVD++++K+SWE DDDEPA  PV+ P PE A KK 
Sbjct: 1   MDDWEDEKIAPLPAKVELKSNWDDEDVDENEIKDSWEDDDDEPAQPPVINPAPEKAPKKA 60

Query: 61  AAKTIEKKGKTAEV----EPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDN 120
           A KT+EKKGK  EV      E+PLDP+AEKLRQQRLVEEADY++T +LF    D+K LD 
Sbjct: 61  APKTVEKKGKAVEVPKEAPKEKPLDPIAEKLRQQRLVEEADYRATAELFGVKDDDKNLDM 120

Query: 121 FIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALA 180
           FIPKS+SDFLEYAE+ISH+++PYEKS+HYI LLK ++RLS+T++KAAD K+VASS+T +A
Sbjct: 121 FIPKSESDFLEYAEMISHRIKPYEKSYHYIALLKTIMRLSLTNMKAADVKDVASSITTIA 180

Query: 181 NEKLKAEKDTS--KKKTGR 192
           NEKLKAEK+ +  KKK G+
Sbjct: 181 NEKLKAEKEAAAGKKKGGK 199

[Close]
BLAST of CmoCh04G023900 vs. TAIR 10
Match: AT1G66070.2 (Translation initiation factor eIF3 subunit )

HSP 1 Score: 229.2 bits (583), Expect = 2.9e-60
Identity = 128/199 (64.32%), Postives = 160/199 (80.40%), Query Frame = 0 

Query: 1   MDDWEDENITPL-QKEQPKNKWDDEDVDDDDVKESWE-DDDEPAPAPVVKPPPEAASKKP 60
           MDDWEDE I PL  K + K+ WDDEDVD++++K+SWE DDDEPA  PV+ P PE A KK 
Sbjct: 1   MDDWEDEKIAPLPAKVELKSNWDDEDVDENEIKDSWEDDDDEPAQPPVINPAPEKAPKKA 60

Query: 61  AAKTIEKKGKTAEV----EPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDN 120
           A KT+EKKGK  EV      E+PLDP+AEKLRQQRLVEEADY++T +LF    D+K LD 
Sbjct: 61  APKTVEKKGKAVEVPKEAPKEKPLDPIAEKLRQQRLVEEADYRATAELFGVKDDDKNLDM 120

Query: 121 FIPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALA 180
           FIPKS+SDFLEYAE+ISH+++PYEKS+HYI LLK ++RLS+T++KAAD K+VASS+T +A
Sbjct: 121 FIPKSESDFLEYAEMISHRIKPYEKSYHYIALLKTIMRLSLTNMKAADVKDVASSITTIA 180

Query: 181 NEKLKAEKDTS--KKKTGR 192
           NEKLKAEK+ +  KKK G+
Sbjct: 181 NEKLKAEKEAAAGKKKGGK 199

[Close]
BLAST of CmoCh04G023900 vs. TAIR 10
Match: AT5G37475.1 (Translation initiation factor eIF3 subunit )

HSP 1 Score: 214.2 bits (544), Expect = 9.6e-56
Identity = 122/198 (61.62%), Postives = 155/198 (78.28%), Query Frame = 0 

Query: 1   MDDWEDENITPL-QKEQPKNKWDDEDVDDDDVKESWEDDDEPAPAPVVKPPPEAASKKPA 60
           MDDWE E+  PL  K + K+ WDDEDVD++D+K+SWE++D  AP P+VKP  E A KKPA
Sbjct: 1   MDDWEAEDFQPLPSKVELKSNWDDEDVDENDIKDSWEEEDVSAPPPIVKPASEKAPKKPA 60

Query: 61  AKTIEKKGKTAE----VEPEQPLDPLAEKLRQQRLVEEADYKSTTDLFKKSGDEKTLDNF 120
            K +EKK KT E       E+PLDP+AEKLR QRLVEEADY+ST +LF    +EK++D  
Sbjct: 61  VKAVEKKVKTVEAPKGTSREEPLDPIAEKLRMQRLVEEADYQSTAELFGVKTEEKSVDML 120

Query: 121 IPKSDSDFLEYAELISHKLRPYEKSFHYINLLKDVIRLSMTSLKAADAKEVASSVTALAN 180
           IPKS+SDFL+YAELIS +L P+EKSFHYI LLK V+RLS+ ++KAAD K+VASS+TA+AN
Sbjct: 121 IPKSESDFLDYAELISQRLVPFEKSFHYIGLLKAVMRLSVANMKAADVKDVASSITAIAN 180

Query: 181 EKLKAEKDTS--KKKTGR 192
           EKLKAEK+ +  KKK+G+
Sbjct: 181 EKLKAEKEAAAGKKKSGK 198

The following BLAST results are available for this feature:
BLAST of CmoCh04G023900 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B4KTH63.9e-1738.12Eukaryotic translation initiation factor 3 subunit J OS=Drosophila mojavensis OX... [more]
B4MP818.6e-1736.71Eukaryotic translation initiation factor 3 subunit J OS=Drosophila willistoni OX... [more]
B4LN421.2e-1536.76Eukaryotic translation initiation factor 3 subunit J OS=Drosophila virilis OX=72... [more]
B4J4E71.6e-1535.50Eukaryotic translation initiation factor 3 subunit J OS=Drosophila grimshawi OX=... [more]
A7RSH73.6e-1535.38Eukaryotic translation initiation factor 3 subunit J OS=Nematostella vectensis O... [more]
BLAST of CmoCh04G023900 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HJG39.0e-94100.00Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita moschata OX=36... [more]
A0A6J1HHK49.0e-94100.00Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita moschata OX=36... [more]
A0A6J1JS594.5e-9398.94Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita maxima OX=3661... [more]
A0A6J1JVF04.5e-9398.94Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita maxima OX=3661... [more]
A0A6J1K2121.8e-8188.48Eukaryotic translation initiation factor 3 subunit J OS=Cucurbita maxima OX=3661... [more]
BLAST of CmoCh04G023900 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022963973.11.9e-93100.00eukaryotic translation initiation factor 3 subunit J-like isoform X1 [Cucurbita ... [more]
XP_022963981.11.9e-93100.00eukaryotic translation initiation factor 3 subunit J-like isoform X2 [Cucurbita ... [more]
XP_023551688.17.1e-9399.47eukaryotic translation initiation factor 3 subunit J-like [Cucurbita pepo subsp.... [more]
XP_022991180.19.2e-9398.94eukaryotic translation initiation factor 3 subunit J-like isoform X2 [Cucurbita ... [more]
XP_022991178.19.2e-9398.94eukaryotic translation initiation factor 3 subunit J-like isoform X1 [Cucurbita ... [more]
BLAST of CmoCh04G023900 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G66070.12.9e-6064.32Translation initiation factor eIF3 subunit [more]
AT1G66070.22.9e-6064.32Translation initiation factor eIF3 subunit [more]
AT5G37475.19.6e-5661.62Translation initiation factor eIF3 subunit [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023194Eukaryotic translation initiation factor 3-like domain superfamilyGENE3D1.10.246.60Eukaryotic translation initiation factor 3 like domainscoord: 110..187
e-value: 8.2E-24
score: 85.9
IPR013906Eukaryotic translation initiation factor 3 subunit JPFAMPF08597eIF3_subunitcoord: 1..188
e-value: 4.0E-47
score: 161.2
IPR013906Eukaryotic translation initiation factor 3 subunit JPANTHERPTHR21681EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Jcoord: 1..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..37

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G023900.1CmoCh04G023900.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001732 formation of cytoplasmic translation initiation complex
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003743 translation initiation factor activity