CmoCh04G023470 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G023470
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Transcription factor, TCP
Location	Cmo_Chr04: 17436112 .. 17436906 (-)
RNA-Seq Expression	CmoCh04G023470
Synteny	CmoCh04G023470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGTTCTGATGGCGTCTCCCACAACAATGGCGCCATAATTCCCCACTCTCAACAGAGCACCCAGACCACCACCAACAATGGCGCTCTGCCTCTCAAGAAACCCCCTGCTAAGGACCGCCACAGCAAGGTCGATGGCCGTGGCCGTCGTATTCGTATGCCCATCATTTGTGCTGCTCGTGTCTTTCAACTCACCCGCGAGTTGGGCCACAAATCCGACGGTCAGACCATTGAGTGGCTCCTCCGTCAAGCAGAGCCTTCCATTATTGCCGCCACTGGCACCGGCACTACTCCGGCTAGCTTCTCCACCATCTGCGCTTCCCTCCGTGGCACTCCTGCCGCTCTTTCCTCTTCAGCTTCTCTCGACCATAAACCCCTTTTGCCTCCTGCCCCTTTCATTCTCGGTAAGCGCGTTAGACCTGACGACGATGCAGGGCATAAAGACAACGACGGAAACGGCGGCGGCGGTGGCGGTAATGGTGGTGGGGGTGCTATTTCTGTCGGCCCTTCTGTTGGTTCTATTATGGGTTCAGCTGCTGCGGGTGGATACTGGGCGTTTCCAGCTAGGCCGGATTTCGGACAGGTATGGAGTTTCGCCGCTGCTGCAGCTCCGGAGATGGTGATTCAACCGACGGCGATTTCTCATCAGGCGTCGTTATTCGCTCAGCAGCAATCAATTGGAGAAGCCTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGTCATCTGAATTTGCTTGCTTCTTTATCAGGTGGACAGGGAAGTTCCGGGCGGAGAGACAACGACCACCGTTGA

mRNA sequence

ATGTCTGGTTCTGATGGCGTCTCCCACAACAATGGCGCCATAATTCCCCACTCTCAACAGAGCACCCAGACCACCACCAACAATGGCGCTCTGCCTCTCAAGAAACCCCCTGCTAAGGACCGCCACAGCAAGGTCGATGGCCGTGGCCGTCGTATTCGTATGCCCATCATTTGTGCTGCTCGTGTCTTTCAACTCACCCGCGAGTTGGGCCACAAATCCGACGGTCAGACCATTGAGTGGCTCCTCCGTCAAGCAGAGCCTTCCATTATTGCCGCCACTGGCACCGGCACTACTCCGGCTAGCTTCTCCACCATCTGCGCTTCCCTCCGTGGCACTCCTGCCGCTCTTTCCTCTTCAGCTTCTCTCGACCATAAACCCCTTTTGCCTCCTGCCCCTTTCATTCTCGGTAAGCGCGTTAGACCTGACGACGATGCAGGGCATAAAGACAACGACGGAAACGGCGGCGGCGGTGGCGGTAATGGTGGTGGGGGTGCTATTTCTGTCGGCCCTTCTGTTGGTTCTATTATGGGTTCAGCTGCTGCGGGTGGATACTGGGCGTTTCCAGCTAGGCCGGATTTCGGACAGGTATGGAGTTTCGCCGCTGCTGCAGCTCCGGAGATGGTGATTCAACCGACGGCGATTTCTCATCAGGCGTCGTTATTCGCTCAGCAGCAATCAATTGGAGAAGCCTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGTCATCTGAATTTGCTTGCTTCTTTATCAGGTGGACAGGGAAGTTCCGGGCGGAGAGACAACGACCACCGTTGA

Coding sequence (CDS)

ATGTCTGGTTCTGATGGCGTCTCCCACAACAATGGCGCCATAATTCCCCACTCTCAACAGAGCACCCAGACCACCACCAACAATGGCGCTCTGCCTCTCAAGAAACCCCCTGCTAAGGACCGCCACAGCAAGGTCGATGGCCGTGGCCGTCGTATTCGTATGCCCATCATTTGTGCTGCTCGTGTCTTTCAACTCACCCGCGAGTTGGGCCACAAATCCGACGGTCAGACCATTGAGTGGCTCCTCCGTCAAGCAGAGCCTTCCATTATTGCCGCCACTGGCACCGGCACTACTCCGGCTAGCTTCTCCACCATCTGCGCTTCCCTCCGTGGCACTCCTGCCGCTCTTTCCTCTTCAGCTTCTCTCGACCATAAACCCCTTTTGCCTCCTGCCCCTTTCATTCTCGGTAAGCGCGTTAGACCTGACGACGATGCAGGGCATAAAGACAACGACGGAAACGGCGGCGGCGGTGGCGGTAATGGTGGTGGGGGTGCTATTTCTGTCGGCCCTTCTGTTGGTTCTATTATGGGTTCAGCTGCTGCGGGTGGATACTGGGCGTTTCCAGCTAGGCCGGATTTCGGACAGGTATGGAGTTTCGCCGCTGCTGCAGCTCCGGAGATGGTGATTCAACCGACGGCGATTTCTCATCAGGCGTCGTTATTCGCTCAGCAGCAATCAATTGGAGAAGCCTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGTCATCTGAATTTGCTTGCTTCTTTATCAGGTGGACAGGGAAGTTCCGGGCGGAGAGACAACGACCACCGTTGA

Protein sequence

MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYLPGHLNLLASLSGGQGSSGRRDNDHR

Homology

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BLAST of CmoCh04G023470 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.6e-66
Identity = 154/254 (60.63%), Postives = 172/254 (67.72%), Query Frame = 0


Query: 26  TNNGAL-------PLKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTI 85
           ++NGAL        +KKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTI
Sbjct: 20  SSNGALIEQQPSVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTI 79

Query: 86  EWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSASLDHKP---LLPPAPFIL 145
           EWLLRQAEPSIIAATGTGTTPASFST   S+RG     ++S SLDHKP   L   +PFIL
Sbjct: 80  EWLLRQAEPSIIAATGTGTTPASFSTASVSIRGA----TNSTSLDHKPTSLLGGTSPFIL 139

Query: 146 GKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAAAGGYWAFPARPDFGQ 205
           GKRVR D+D+ +  N                SVG        +    G+WA PARPDFGQ
Sbjct: 140 GKRVRADEDSNNSHNHS--------------SVGKDE---TFTTTPAGFWAVPARPDFGQ 199

Query: 206 VWSFAAAAAPEMVIQPTAISHQASLFAQQQ-----SIGEASAAKVGNYLPGHLNLLASLS 265
           VWSF  A AP+ +       HQ  LF  QQ     ++GEASAA+VGNYLPGHLNLLASLS
Sbjct: 200 VWSF--AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYLPGHLNLLASLS 250

[Close]

BLAST of CmoCh04G023470 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.1e-64
Identity = 159/275 (57.82%), Postives = 187/275 (68.00%), Query Frame = 0


Query: 1   MSGSDGVSHNNGAIIPHSQQSTQTTTNNGAL-PLKKPPAKDRHSKVDGRGRRIRMPIICA 60
           M+ +DG + +NG I+       + T+N G L  +KKPP+KDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MADNDG-AVSNGIIV-------EQTSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSS 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFST         A+LS+S
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFST---------ASLSTS 120

Query: 121 ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVG-SIMGS 180
                      +PF LGKRV   ++           G  G GGGG ++VG ++G S+MG 
Sbjct: 121 -----------SPFTLGKRVVRAEE-----------GESGGGGGGGLTVGHTMGTSLMGG 180

Query: 181 AAAGGYWAFPARPDFGQVWSFAAAAAPEMVI----QPTAI-----SHQASLFAQQQSIGE 240
             +GG+WA PARPDFGQVWSFA  A PEMV     QP  +       Q +  A   ++GE
Sbjct: 181 GGSGGFWAVPARPDFGQVWSFATGAPPEMVFAQQQQPATLFVRHQQQQQASAAAAAAMGE 236

Query: 241 ASAAKVGNYLPG-HLNLLASLSGGQGSSGRRDNDH 264
           ASAA+VGNYLPG HLNLLASLSGG   SGRR++DH
Sbjct: 241 ASAARVGNYLPGHHLNLLASLSGGANGSGRREDDH 236

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BLAST of CmoCh04G023470 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.4e-30
Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = 0


Query: 16  PHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 75
           P    +  TT++       K   KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG
Sbjct: 38  PPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDG 97

Query: 76  QTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSAS 122
           +TIEWLL+QAEP+I+AATGTGT PA+FST+  SLR + + LS+  S
Sbjct: 98  ETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAPPS 143

[Close]

BLAST of CmoCh04G023470 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.0e-30
Identity = 63/86 (73.26%), Postives = 77/86 (89.53%), Query Frame = 0


Query: 32  PLKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIA 91
           PLK+   KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAEPS+IA
Sbjct: 111 PLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIA 170

Query: 92  ATGTGTTPASFSTICASLRGTPAALS 118
           ATGTGT PA+F+++  SLR + +++S
Sbjct: 171 ATGTGTIPANFTSLNISLRSSGSSMS 196

[Close]

BLAST of CmoCh04G023470 vs. ExPASy Swiss-Prot
Match: Q9LQF0 (Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-29
Identity = 70/101 (69.31%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 21  STQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEW 80
           ST TT      P K+ P+KDRH KVDGRGRRIRMP ICAARVFQLTREL HKSDG+TIEW
Sbjct: 39  STTTTVTAAKTPAKR-PSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEW 98

Query: 81  LLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSAS 122
           LL+QAEP+IIAATGTGT PA+ ST+  SLR + + LS+  S
Sbjct: 99  LLQQAEPAIIAATGTGTIPANISTLNISLRSSGSTLSAPLS 138

[Close]

BLAST of CmoCh04G023470 vs. ExPASy TrEMBL
Match: A0A6J1E5Y0 (transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111431092 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 3.9e-140
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA 60
           MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSA 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSA
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSA 120

Query: 121 SLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAA 180
           SLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAA
Sbjct: 121 SLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAA 180

Query: 181 AGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYLP 240
           AGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYLP
Sbjct: 181 AGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYLP 240

Query: 241 GHLNLLASLSGGQGSSGRRDNDHR 265
           GHLNLLASLSGGQGSSGRRDNDHR
Sbjct: 241 GHLNLLASLSGGQGSSGRRDNDHR 264

[Close]

BLAST of CmoCh04G023470 vs. ExPASy TrEMBL
Match: A0A6J1JUL9 (transcription factor TCP21-like OS=Cucurbita maxima OX=3661 GN=LOC111487646 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.3e-132
Identity = 258/266 (96.99%), Postives = 259/266 (97.37%), Query Frame = 0


Query: 1   MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA 60
           MSGSDGV+HNNGAIIPHSQQS Q TTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA
Sbjct: 40  MSGSDGVAHNNGAIIPHSQQSNQ-TTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA 99

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSS- 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPA LSSS 
Sbjct: 100 RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPATLSSSS 159

Query: 121 -ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS 180
            ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDG GGGGGGNGGGGAISVGPSVGSIMGS
Sbjct: 160 PASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDG-GGGGGGNGGGGAISVGPSVGSIMGS 219

Query: 181 AAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 240
           AAAGGYWAFPAR DFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY
Sbjct: 220 AAAGGYWAFPARSDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 279

Query: 241 LPGHLNLLASLSGGQGSSGRRDNDHR 265
           LPGHLNLLASLSGGQGSSGRRDNDHR
Sbjct: 280 LPGHLNLLASLSGGQGSSGRRDNDHR 303

[Close]

BLAST of CmoCh04G023470 vs. ExPASy TrEMBL
Match: A0A6J1FD69 (transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111444685 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.8e-106
Identity = 220/266 (82.71%), Postives = 230/266 (86.47%), Query Frame = 0


Query: 1   MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA 60
           MSGSDGV+ NNGAII HSQ     TTNNG L +KKPP+KDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSGSDGVNCNNGAIIDHSQ-----TTNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSA 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTI ASLRG  AA S   
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAAAS--- 120

Query: 121 SLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAA 180
           SLDHKPLL PAPFILGKRVR DDD  +KD DG+GGG    GGGG +SVG +V S MG+AA
Sbjct: 121 SLDHKPLLAPAPFILGKRVRTDDDGDNKD-DGSGGG----GGGGGVSVGSTVSSFMGTAA 180

Query: 181 AGGYWAFPARPDFGQVWSF--AAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 240
           AGGYWA P RPDFGQVWSF  AAAAAPEMVIQPTA+SH ASLF QQQS+GEASAAKVGNY
Sbjct: 181 AGGYWAIPTRPDFGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNY 240

Query: 241 LPGHLNLLASLSGGQGSSGRRDNDHR 265
           LPGHLNLLASLSGG GSSGRRDNDHR
Sbjct: 241 LPGHLNLLASLSGGPGSSGRRDNDHR 253

[Close]

BLAST of CmoCh04G023470 vs. ExPASy TrEMBL
Match: A0A6J1JZE2 (transcription factor TCP21-like OS=Cucurbita maxima OX=3661 GN=LOC111489247 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.5e-102
Identity = 215/268 (80.22%), Postives = 225/268 (83.96%), Query Frame = 0


Query: 1   MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA 60
           MSGS GV+ NNGAII HSQ     T NNG L +KKPP+KDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSGSGGVNGNNGAIIDHSQ-----TNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSA 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTI ASLRG  AA S   
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAAAS--- 120

Query: 121 SLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAA 180
           SLDHKPLL PAPFILGKRVR DDD  +KD DG+GGG    G GG +SVG +V S MG+AA
Sbjct: 121 SLDHKPLLAPAPFILGKRVRADDDGDNKD-DGSGGG----GVGGGVSVGSTVSSFMGTAA 180

Query: 181 AGGYWAFPARPDFGQVWSF-----AAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKV 240
           AGGYWA P RPDFGQVWSF     AAAAAPEMVIQPTA+SH ASLF QQQS+GEASAAKV
Sbjct: 181 AGGYWAIPTRPDFGQVWSFAAAAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKV 240

Query: 241 GNYLPGHLNLLASLSGGQGSSGRRDNDH 264
           GNYLPGHLNLLASLS G GSSGRRDNDH
Sbjct: 241 GNYLPGHLNLLASLSSGPGSSGRRDNDH 255

[Close]

BLAST of CmoCh04G023470 vs. ExPASy TrEMBL
Match: A0A1S3CJ76 (transcription factor TCP21-like OS=Cucumis melo OX=3656 GN=LOC103501575 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.2e-101
Identity = 213/277 (76.90%), Postives = 224/277 (80.87%), Query Frame = 0


Query: 1   MSGSDGVSHNNGAIIPHSQQ-------STQTTTNNGA--LPLKKPPAKDRHSKVDGRGRR 60
           MS SD V++NN AII HS Q           ++NN A  LPLKKPP+KDRHSKVDGRGRR
Sbjct: 1   MSASDAVNNNNAAIIEHSHQQHTHRIHGNNQSSNNAATPLPLKKPPSKDRHSKVDGRGRR 60

Query: 61  IRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRG 120
           IRMPI+CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTI ASLR 
Sbjct: 61  IRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRT 120

Query: 121 TPAALSSSASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPS 180
            PAA  S    DHKPLLPPAPFILGKRVR DDD  +KD+ G        G G  ISVGPS
Sbjct: 121 PPAASVS----DHKPLLPPAPFILGKRVRTDDDVANKDDTG--------GAGAGISVGPS 180

Query: 181 VGSIMGSAAAGGYWAFPARPDFGQVWSF----AAAAAPEMVIQPTAISHQASLFAQQQSI 240
           +GSIMG A AGGYWA PAR DFGQVWSF    AAAAAPEMVIQPTA+SHQASLF QQQS+
Sbjct: 181 IGSIMGPAVAGGYWAIPARSDFGQVWSFAAAAAAAAAPEMVIQPTAVSHQASLFVQQQSM 240

Query: 241 GEASAAKVGNYLPGHLNLLASLSGGQGSSGRRDNDHR 265
           GEASAAKVGNYLPGHLNLLASLSGG GSSGRRDNDHR
Sbjct: 241 GEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR 265

[Close]

BLAST of CmoCh04G023470 vs. NCBI nr
Match: XP_022923377.1 (transcription factor TCP21-like [Cucurbita moschata] >KAG6601984.1 Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032682.1 Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 507.3 bits (1305), Expect = 8.0e-140
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA 60
           MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSA 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSA
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSA 120

Query: 121 SLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAA 180
           SLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAA
Sbjct: 121 SLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAA 180

Query: 181 AGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYLP 240
           AGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYLP
Sbjct: 181 AGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYLP 240

Query: 241 GHLNLLASLSGGQGSSGRRDNDHR 265
           GHLNLLASLSGGQGSSGRRDNDHR
Sbjct: 241 GHLNLLASLSGGQGSSGRRDNDHR 264

[Close]

BLAST of CmoCh04G023470 vs. NCBI nr
Match: XP_023520182.1 (transcription factor TCP21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.5 bits (1290), Expect = 4.4e-138
Identity = 263/265 (99.25%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MSGSDG-VSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICA 60
           MSGSDG V+HNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSGSDGVVTHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSS 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSS
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSS 120

Query: 121 ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSA 180
           ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSA
Sbjct: 121 ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSA 180

Query: 181 AAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYL 240
           AAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYL
Sbjct: 181 AAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYL 240

Query: 241 PGHLNLLASLSGGQGSSGRRDNDHR 265
           PGHLNLLASLSGGQGSSGRRDNDHR
Sbjct: 241 PGHLNLLASLSGGQGSSGRRDNDHR 265

[Close]

BLAST of CmoCh04G023470 vs. NCBI nr
Match: XP_022990893.1 (transcription factor TCP21-like [Cucurbita maxima])

HSP 1 Score: 481.5 bits (1238), Expect = 4.7e-132
Identity = 258/266 (96.99%), Postives = 259/266 (97.37%), Query Frame = 0


Query: 1   MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA 60
           MSGSDGV+HNNGAIIPHSQQS Q TTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA
Sbjct: 40  MSGSDGVAHNNGAIIPHSQQSNQ-TTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA 99

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSS- 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPA LSSS 
Sbjct: 100 RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPATLSSSS 159

Query: 121 -ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS 180
            ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDG GGGGGGNGGGGAISVGPSVGSIMGS
Sbjct: 160 PASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDG-GGGGGGNGGGGAISVGPSVGSIMGS 219

Query: 181 AAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 240
           AAAGGYWAFPAR DFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY
Sbjct: 220 AAAGGYWAFPARSDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 279

Query: 241 LPGHLNLLASLSGGQGSSGRRDNDHR 265
           LPGHLNLLASLSGGQGSSGRRDNDHR
Sbjct: 280 LPGHLNLLASLSGGQGSSGRRDNDHR 303

[Close]

BLAST of CmoCh04G023470 vs. NCBI nr
Match: XP_038876310.1 (transcription factor TCP21-like [Benincasa hispida])

HSP 1 Score: 404.8 bits (1039), Expect = 5.6e-109
Identity = 219/271 (80.81%), Postives = 233/271 (85.98%), Query Frame = 0


Query: 1   MSGSDGVSHNNGAIIPHSQQST-------QTTTNNGALPLKKPPAKDRHSKVDGRGRRIR 60
           MSGSDGV++NNGAII HSQQ           +TNNGAL ++KPP+KDRHSKVDGRGRRIR
Sbjct: 1   MSGSDGVNNNNGAIIDHSQQQRHQHQIQGNQSTNNGALVVRKPPSKDRHSKVDGRGRRIR 60

Query: 61  MPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTP 120
           MPI+CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTI ASLRGTP
Sbjct: 61  MPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGTP 120

Query: 121 A-ALSSSASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSV 180
           A A SSS+SLDHKPLL PAPFILGKRVR DDD  +KD          + GGG ISVGP++
Sbjct: 121 AVASSSSSSLDHKPLLAPAPFILGKRVRTDDDGANKD----------DSGGGGISVGPTI 180

Query: 181 GSIMGSAAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASA 240
           GSIMG AA GGYWA PAR DFGQVWSFAAAAAPEMVIQPTA+SHQASLF QQQS+GEASA
Sbjct: 181 GSIMGPAATGGYWAIPARSDFGQVWSFAAAAAPEMVIQPTAVSHQASLFVQQQSMGEASA 240

Query: 241 AKVGNYLPGHLNLLASLSGGQGSSGRRDNDH 264
           AKVGNYLPGHLNLLASLSGG GSSGRRDNDH
Sbjct: 241 AKVGNYLPGHLNLLASLSGGPGSSGRRDNDH 261

[Close]

BLAST of CmoCh04G023470 vs. NCBI nr
Match: XP_022938451.1 (transcription factor TCP21-like [Cucurbita moschata])

HSP 1 Score: 394.8 bits (1013), Expect = 5.8e-106
Identity = 220/266 (82.71%), Postives = 230/266 (86.47%), Query Frame = 0


Query: 1   MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAA 60
           MSGSDGV+ NNGAII HSQ     TTNNG L +KKPP+KDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSGSDGVNCNNGAIIDHSQ-----TTNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSA 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTI ASLRG  AA S   
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAAAS--- 120

Query: 121 SLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAA 180
           SLDHKPLL PAPFILGKRVR DDD  +KD DG+GGG    GGGG +SVG +V S MG+AA
Sbjct: 121 SLDHKPLLAPAPFILGKRVRTDDDGDNKD-DGSGGG----GGGGGVSVGSTVSSFMGTAA 180

Query: 181 AGGYWAFPARPDFGQVWSF--AAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 240
           AGGYWA P RPDFGQVWSF  AAAAAPEMVIQPTA+SH ASLF QQQS+GEASAAKVGNY
Sbjct: 181 AGGYWAIPTRPDFGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNY 240

Query: 241 LPGHLNLLASLSGGQGSSGRRDNDHR 265
           LPGHLNLLASLSGG GSSGRRDNDHR
Sbjct: 241 LPGHLNLLASLSGGPGSSGRRDNDHR 253

[Close]

BLAST of CmoCh04G023470 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor )

HSP 1 Score: 253.1 bits (645), Expect = 2.5e-67
Identity = 154/254 (60.63%), Postives = 172/254 (67.72%), Query Frame = 0


Query: 26  TNNGAL-------PLKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTI 85
           ++NGAL        +KKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTI
Sbjct: 20  SSNGALIEQQPSVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTI 79

Query: 86  EWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSASLDHKP---LLPPAPFIL 145
           EWLLRQAEPSIIAATGTGTTPASFST   S+RG     ++S SLDHKP   L   +PFIL
Sbjct: 80  EWLLRQAEPSIIAATGTGTTPASFSTASVSIRGA----TNSTSLDHKPTSLLGGTSPFIL 139

Query: 146 GKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAAAGGYWAFPARPDFGQ 205
           GKRVR D+D+ +  N                SVG        +    G+WA PARPDFGQ
Sbjct: 140 GKRVRADEDSNNSHNHS--------------SVGKDE---TFTTTPAGFWAVPARPDFGQ 199

Query: 206 VWSFAAAAAPEMVIQPTAISHQASLFAQQQ-----SIGEASAAKVGNYLPGHLNLLASLS 265
           VWSF  A AP+ +       HQ  LF  QQ     ++GEASAA+VGNYLPGHLNLLASLS
Sbjct: 200 VWSF--AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYLPGHLNLLASLS 250

[Close]

BLAST of CmoCh04G023470 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor )

HSP 1 Score: 248.1 bits (632), Expect = 8.1e-66
Identity = 159/275 (57.82%), Postives = 187/275 (68.00%), Query Frame = 0


Query: 1   MSGSDGVSHNNGAIIPHSQQSTQTTTNNGAL-PLKKPPAKDRHSKVDGRGRRIRMPIICA 60
           M+ +DG + +NG I+       + T+N G L  +KKPP+KDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MADNDG-AVSNGIIV-------EQTSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSS 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFST         A+LS+S
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFST---------ASLSTS 120

Query: 121 ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVG-SIMGS 180
                      +PF LGKRV   ++           G  G GGGG ++VG ++G S+MG 
Sbjct: 121 -----------SPFTLGKRVVRAEE-----------GESGGGGGGGLTVGHTMGTSLMGG 180

Query: 181 AAAGGYWAFPARPDFGQVWSFAAAAAPEMVI----QPTAI-----SHQASLFAQQQSIGE 240
             +GG+WA PARPDFGQVWSFA  A PEMV     QP  +       Q +  A   ++GE
Sbjct: 181 GGSGGFWAVPARPDFGQVWSFATGAPPEMVFAQQQQPATLFVRHQQQQQASAAAAAAMGE 236

Query: 241 ASAAKVGNYLPG-HLNLLASLSGGQGSSGRRDNDH 264
           ASAA+VGNYLPG HLNLLASLSGG   SGRR++DH
Sbjct: 241 ASAARVGNYLPGHHLNLLASLSGGANGSGRREDDH 236

[Close]

BLAST of CmoCh04G023470 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-31
Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = 0


Query: 16  PHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 75
           P    +  TT++       K   KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG
Sbjct: 38  PPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDG 97

Query: 76  QTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSAS 122
           +TIEWLL+QAEP+I+AATGTGT PA+FST+  SLR + + LS+  S
Sbjct: 98  ETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAPPS 143

[Close]

BLAST of CmoCh04G023470 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 132.5 bits (332), Expect = 5.0e-31
Identity = 63/86 (73.26%), Postives = 77/86 (89.53%), Query Frame = 0


Query: 32  PLKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIA 91
           PLK+   KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAEPS+IA
Sbjct: 111 PLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIA 170

Query: 92  ATGTGTTPASFSTICASLRGTPAALS 118
           ATGTGT PA+F+++  SLR + +++S
Sbjct: 171 ATGTGTIPANFTSLNISLRSSGSSMS 196

[Close]

BLAST of CmoCh04G023470 vs. TAIR 10
Match: AT1G35560.1 (TCP family transcription factor )

HSP 1 Score: 131.7 bits (330), Expect = 8.5e-31
Identity = 70/101 (69.31%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 21  STQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEW 80
           ST TT      P K+ P+KDRH KVDGRGRRIRMP ICAARVFQLTREL HKSDG+TIEW
Sbjct: 39  STTTTVTAAKTPAKR-PSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEW 98

Query: 81  LLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSAS 122
           LL+QAEP+IIAATGTGT PA+ ST+  SLR + + LS+  S
Sbjct: 99  LLQQAEPAIIAATGTGTIPANISTLNISLRSSGSTLSAPLS 138

The following BLAST results are available for this feature:

BLAST of CmoCh04G023470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMX2	3.6e-66	60.63	Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1	[more]
Q9FTA2	1.1e-64	57.82	Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1	[more]
Q9C518	2.4e-30	63.21	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]
Q93Z00	7.0e-30	73.26	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q9LQF0	1.2e-29	69.31	Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1	[more]

BLAST of CmoCh04G023470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5Y0	3.9e-140	100.00	transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111431092 PE...	[more]
A0A6J1JUL9	2.3e-132	96.99	transcription factor TCP21-like OS=Cucurbita maxima OX=3661 GN=LOC111487646 PE=4...	[more]
A0A6J1FD69	2.8e-106	82.71	transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111444685 PE...	[more]
A0A6J1JZE2	2.5e-102	80.22	transcription factor TCP21-like OS=Cucurbita maxima OX=3661 GN=LOC111489247 PE=4...	[more]
A0A1S3CJ76	1.2e-101	76.90	transcription factor TCP21-like OS=Cucumis melo OX=3656 GN=LOC103501575 PE=4 SV=...	[more]

BLAST of CmoCh04G023470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923377.1	8.0e-140	100.00	transcription factor TCP21-like [Cucurbita moschata] >KAG6601984.1 Transcription...	[more]
XP_023520182.1	4.4e-138	99.25	transcription factor TCP21-like [Cucurbita pepo subsp. pepo]	[more]
XP_022990893.1	4.7e-132	96.99	transcription factor TCP21-like [Cucurbita maxima]	[more]
XP_038876310.1	5.6e-109	80.81	transcription factor TCP21-like [Benincasa hispida]	[more]
XP_022938451.1	5.8e-106	82.71	transcription factor TCP21-like [Cucurbita moschata]	[more]

BLAST of CmoCh04G023470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23280.1	2.5e-67	60.63	TCP family transcription factor	[more]
AT5G08330.1	8.1e-66	57.82	TCP family transcription factor	[more]
AT1G58100.1	1.7e-31	63.21	TCP family transcription factor	[more]
AT3G47620.1	5.0e-31	73.26	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G35560.1	8.5e-31	69.31	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 38..123 e-value: 4.1E-31 score: 108.6
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 38..92 score: 27.891777
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR31072:SF7	TRANSCRIPTION FACTOR TCP21-RELATED	coord: 1..261
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 1..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G023470.1	CmoCh04G023470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding