CmoCh04G023400 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTTACAGCTCAAGATCGACAAATATACGCGCAAATGATTCACAGAAAAGGATGCTTACTACATGATCTACTTGAATCTTCTAGCTTTCCATATCGACGAGGGGACCCTCCTGATCTTCTTTAATAAGGTCGTGAATTTGTCTCTCCCTTCACCCTTTTTTTTCTTCATCTTTTGACCTGCCGACTTGAAATCCTCCATGGATTTGTTTCTTTTACTTTTTCTAGCTGTTTCTAACGCTCAGGACCCATTAACACTGTTTGATGAACTAAGATTAAAGTGGGATTTCCTGAATGTCCACAATGGAACAGAAATTTATCTTTTGGGATCTTGCACACCATGTGTTTGATGAAAGTCCTGGTACTTTTTTTTCACCTTCACTCATGCTTACGAGTTCTTTTGATGCTGCGTGAGTCAGAGGAGGAGAAAGTAGCAGTTATATTAGGCAATTCAACTGAGATTTTGTACTGTAAACATAATATCAATCTTCGTTTCTGGTAAAATTATGCGTCCGTTATGCCTTTTAGCATGTGATAGGTGTTAGTTTTACCAGTTGGGTTTTACATGGACCTTCCTTACCTTTTCTTTATGCTGGTATGGAAAGTAAGCTGGCATCAGAAAGCCAATATGCCAGCTCAAAAAGTTGAAAATCATAGCCTCACACCGTTTCAAATTGAGGGAAAGTAGGAATCTATAGTGCTATGATTCAAAAGTTGTCTTGGGATCTATTTTCAATAGCTAGCTTTTTCTACACTTTCTTCTTCTTATTTATTTTATCAACTTTTTTCGGGGTGCGAGTGGCAGTTCGTTAAGAAACCTGAACAATTTTCGTGTCGCCATAATTCATGGTAATAGATGTTTTAAATAAGAGGTACGTGAGGATAACTTAACTTGTTAAGTCATAATTATCCAACTAAAAGGTTGAGGCTGAAATCCTCACGTGTTGTTGAATATTACTCTCTTGTTTCCTTGAGCTTTTAGTGGATCTGCTCGGTAAGGTCCTTTTTCGGTAGTGCAAAGAAACTAAAAACAAAGTCATGAGAGTTTAGGCTCAAAGTGGACAATATCATACCATTGTGGAGGTTCGTAATTCCTAACATGGTATCAGAGTCATGCCTTTAACTTAGCCATGTCAATAGAATCCTCAAATGTCGAACAAAGAAGTTCTGAGTCTCGAAAATGTAGTCAAAAGTGACTCAAGTGTCGAACAAATAGTGTACTTTGTTTGAGGCTCTGGAGAAGGAGTCGAGCCTCGATTAAGAGGAGGCTGTTCGAGGGCTCCATAGGCCTCAGGGGAGGCTCTATGGTGTACTTGGTTCGAAGGATTGTTGGGAGGGAGTCTCACATTGGCTAATTAAGGGGAAGATCACGGAAACGAGACATTTTGGGAGAACCAAAAGCAGAGCTATGAGAGCTTATGCTAAAAGTGGATAATATCATACCATTATGGAGAGTCGTGGTTTCTAACATCCTCGTTATACTTACTTACACTCAGCACTTACTGCAATGTACCGAGACCATCGGCTTTCATATGCTTATAATTCCAAGAAACTAGCCTTTCTTCAGCAGCGTTCTAGGGAGATAGAAGATATTAAAAAATGCATTCAGTTTTTCTTTTTTCTAAAGTTACTAAACCTAAGATCCCCTTTTCTTTTTCCCAATTTGCTTAACTTTATTTTTTTCTGATGCACATTGGATGACTCGGACAATAGAAAAGTAAGATTCACCAACAATTTTCGACCCCTTTAAATGTATTAGGAGAATCAAAGAATGATACACTAGGCATCAAGCAAACATCTCTTCCCCTGCTTATTGCTATAGAAGAACATCCTAGGTAAGTGGCTGCAGAGTTCAAGCCGCTCAAAGCAAGAGCATTCTGTATTGCCGAGTTTTCTTTATCAATATTCGAATATGGAAGCTTCACTGCAGAGACATGTTATTGGATTTCCACTTGGCTCAGCAGCATTGCAGGTCGAGCAATCGGTTAAAAGACTCTTACCTGATCTTGCTGGCCAGTACAACATTCCCCCCTCAGATGGTAAATATCCATCAAAACAATGTAAGAAATCCCCCCCTACTCTTAGTTTGACAAATGAATGATGAGCAAGAAATGGACTTTTGGATTGAGAATAGTCTTCATTTTGCAGGTAGTAAAAATTCTGTGCTTAGCAGGGTGAATAAGCTTGGTAAAAAAGCAGACAAGTTTGCACATGGAGTCCGAGAACATGGTGAGTTCATTGCTCTACTTTATTAGTTTCTTATTAGGAGTGTCAAATGCTTTGAAACGGTGCTAATGTGAGATCCCACATTGGTTGGAGAGAGGAATGAAACATTTTTTATAAGAGTGTGAAAACCTCTCCCTAGTAGACGTGTTTTAAAAACCTTGAGGGGAAACCCGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGCAGTGGGCTTGAGCTGTTACAAATGATATCAAAGCCAGACATCGAGCGGTGTGCCAGCGAGGACGCTCGGCCCCCAATGGAGGTGGATTGTGAGATCCCTCGTCGGTTGGACAGGAGAACGAAACATTAATTATAAGGGTGTGGAAACCTCTCCCTATCTGCTAGCGGTGGACGAGAATTGGGATGATAACTAAGTTTTTCTTTTGTTTATTTATTACAACATCCAAGTGAGCTATTTGGCATGGAAATTTGATAGAAACTTTCCTGTTTATTGAACTACAGTGAGATTGGGATCCAACATCTCAGAAATTGTTAAGGGAAAGTTGAGCTTAGGAGCTAGAATTCTTCAAGTAGGTGGTTTAAGAAAAATATACAAGCAATTGTTTAGTGATGGAGATAGCGAGAAATTGTTGAAGGCTGCCCAATGCTATCTGTCAACCACAGCTGGACCCATTGCAGGTCTGCTCTTCATATCCACAGATAAGATTGCCTTCTGCAGTGACAGATCCATCAAAGTTTCTTCCTCCTCAGGAGAGCTAATTCGATTCCATTACAAGGTATGGTTGCTTTCTTGTTCTTCGTCGTGGTCGTCGTCTTCTTTCTTTCTCTGTGCTAAATCTCGAAAGAAATGTTTGTGTTCTGCAGGTAGTGATTCCAGTAGGAAAAATAGAGAGAATCAATGAGAGTGAGAATGTGAAGAAGCCTTCACAGAAGTACATAGAAATAGTTACAGTTGATAATTTTGATTTCTGGTTCATGGGGTTCTTAAATTATTACAAAACTCTTCAGTATCTTCAAAATTTGATCTCTTTAGAATGCAAGAACTGCTAG TTTTACAGCTCAAGATCGACAAATATACGCGCAAATGATTCACAGAAAAGGATGCTTACTACATGATCTACTTGAATCTTCTAGCTTTCCATATCGACGAGGGGACCCTCCTGATCTTCTTTAATAAGGAGAATCAAAGAATGATACACTAGGCATCAAGCAAACATCTCTTCCCCTGCTTATTGCTATAGAAGAACATCCTAGGTAAGTGGCTGCAGAGTTCAAGCCGCTCAAAGCAAGAGCATTCTGTATTGCCGAGTTTTCTTTATCAATATTCGAATATGGAAGCTTCACTGCAGAGACATGTTATTGGATTTCCACTTGGCTCAGCAGCATTGCAGGTCGAGCAATCGGTTAAAAGACTCTTACCTGATCTTGCTGGCCAGTACAACATTCCCCCCTCAGATGGTAAATATCCATCAAAACAATGTAGTAAAAATTCTGTGCTTAGCAGGGTGAATAAGCTTGGTAAAAAAGCAGACAAGTTTGCACATGGAGTCCGAGAACATGTGAGATTGGGATCCAACATCTCAGAAATTGTTAAGGGAAAGTTGAGCTTAGGAGCTAGAATTCTTCAAGTAGGTGGTTTAAGAAAAATATACAAGCAATTGTTTAGTGATGGAGATAGCGAGAAATTGTTGAAGGCTGCCCAATGCTATCTGTCAACCACAGCTGGACCCATTGCAGGTCTGCTCTTCATATCCACAGATAAGATTGCCTTCTGCAGTGACAGATCCATCAAAGTTTCTTCCTCCTCAGGAGAGCTAATTCGATTCCATTACAAGGTAGTGATTCCAGTAGGAAAAATAGAGAGAATCAATGAGAGTGAGAATGTGAAGAAGCCTTCACAGAAGTACATAGAAATAGTTACAGTTGATAATTTTGATTTCTGGTTCATGGGGTTCTTAAATTATTACAAAACTCTTCAGTATCTTCAAAATTTGATCTCTTTAGAATGCAAGAACTGCTAG ATGGAAGCTTCACTGCAGAGACATGTTATTGGATTTCCACTTGGCTCAGCAGCATTGCAGGTCGAGCAATCGGTTAAAAGACTCTTACCTGATCTTGCTGGCCAGTACAACATTCCCCCCTCAGATGGTAAATATCCATCAAAACAATGTAGTAAAAATTCTGTGCTTAGCAGGGTGAATAAGCTTGGTAAAAAAGCAGACAAGTTTGCACATGGAGTCCGAGAACATGTGAGATTGGGATCCAACATCTCAGAAATTGTTAAGGGAAAGTTGAGCTTAGGAGCTAGAATTCTTCAAGTAGGTGGTTTAAGAAAAATATACAAGCAATTGTTTAGTGATGGAGATAGCGAGAAATTGTTGAAGGCTGCCCAATGCTATCTGTCAACCACAGCTGGACCCATTGCAGGTCTGCTCTTCATATCCACAGATAAGATTGCCTTCTGCAGTGACAGATCCATCAAAGTTTCTTCCTCCTCAGGAGAGCTAATTCGATTCCATTACAAGGTAGTGATTCCAGTAGGAAAAATAGAGAGAATCAATGAGAGTGAGAATGTGAAGAAGCCTTCACAGAAGTACATAGAAATAGTTACAGTTGATAATTTTGATTTCTGGTTCATGGGGTTCTTAAATTATTACAAAACTCTTCAGTATCTTCAAAATTTGATCTCTTTAGAATGCAAGAACTGCTAG MEASLQRHVIGFPLGSAALQVEQSVKRLLPDLAGQYNIPPSDGKYPSKQCSKNSVLSRVNKLGKKADKFAHGVREHVRLGSNISEIVKGKLSLGARILQVGGLRKIYKQLFSDGDSEKLLKAAQCYLSTTAGPIAGLLFISTDKIAFCSDRSIKVSSSSGELIRFHYKVVIPVGKIERINESENVKKPSQKYIEIVTVDNFDFWFMGFLNYYKTLQYLQNLISLECKNC Homology
BLAST of CmoCh04G023400 vs. ExPASy Swiss-Prot
Match: Q9FTA0 (GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 4.9e-56 Identity = 115/198 (58.08%), Postives = 145/198 (73.23%), Query Frame = 0
BLAST of CmoCh04G023400 vs. ExPASy Swiss-Prot
Match: Q9FMW4 (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.4e-55 Identity = 118/198 (59.60%), Postives = 138/198 (69.70%), Query Frame = 0
BLAST of CmoCh04G023400 vs. ExPASy Swiss-Prot
Match: Q9FMW6 (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2) HSP 1 Score: 210.3 bits (534), Expect = 2.3e-53 Identity = 117/222 (52.70%), Postives = 144/222 (64.86%), Query Frame = 0
BLAST of CmoCh04G023400 vs. ExPASy Swiss-Prot
Match: Q9FMW5 (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 1.9e-52 Identity = 114/219 (52.05%), Postives = 144/219 (65.75%), Query Frame = 0
BLAST of CmoCh04G023400 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 2.5e-31 Identity = 77/221 (34.84%), Postives = 130/221 (58.82%), Query Frame = 0
BLAST of CmoCh04G023400 vs. ExPASy TrEMBL
Match: A0A6J1GPT0 (putative GEM-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111456007 PE=3 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 4.4e-124 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of CmoCh04G023400 vs. ExPASy TrEMBL
Match: A0A6J1JM22 (GEM-like protein 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487106 PE=3 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 2.3e-120 Identity = 222/229 (96.94%), Postives = 226/229 (98.69%), Query Frame = 0
BLAST of CmoCh04G023400 vs. ExPASy TrEMBL
Match: A0A6J1JSB8 (GEM-like protein 4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487106 PE=3 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110 Identity = 205/213 (96.24%), Postives = 210/213 (98.59%), Query Frame = 0
BLAST of CmoCh04G023400 vs. ExPASy TrEMBL
Match: A0A5D3CUH3 (Putative GEM-like protein 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00540 PE=3 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 5.4e-106 Identity = 199/230 (86.52%), Postives = 211/230 (91.74%), Query Frame = 0
BLAST of CmoCh04G023400 vs. ExPASy TrEMBL
Match: A0A0A0KMT0 (GRAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G352650 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 1.6e-105 Identity = 198/230 (86.09%), Postives = 213/230 (92.61%), Query Frame = 0
BLAST of CmoCh04G023400 vs. NCBI nr
Match: XP_022953469.1 (putative GEM-like protein 8 [Cucurbita moschata] >XP_022953476.1 putative GEM-like protein 8 [Cucurbita moschata]) HSP 1 Score: 453.8 bits (1166), Expect = 9.1e-124 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of CmoCh04G023400 vs. NCBI nr
Match: XP_022990116.1 (GEM-like protein 4 isoform X1 [Cucurbita maxima] >XP_022990117.1 GEM-like protein 4 isoform X1 [Cucurbita maxima]) HSP 1 Score: 441.4 bits (1134), Expect = 4.7e-120 Identity = 222/229 (96.94%), Postives = 226/229 (98.69%), Query Frame = 0
BLAST of CmoCh04G023400 vs. NCBI nr
Match: XP_023526338.1 (GEM-like protein 7 [Cucurbita pepo subsp. pepo] >XP_023526343.1 GEM-like protein 7 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 437.6 bits (1124), Expect = 6.7e-119 Identity = 221/229 (96.51%), Postives = 225/229 (98.25%), Query Frame = 0
BLAST of CmoCh04G023400 vs. NCBI nr
Match: XP_022990118.1 (GEM-like protein 4 isoform X2 [Cucurbita maxima]) HSP 1 Score: 408.7 bits (1049), Expect = 3.4e-110 Identity = 205/213 (96.24%), Postives = 210/213 (98.59%), Query Frame = 0
BLAST of CmoCh04G023400 vs. NCBI nr
Match: KAA0066140.1 (putative GEM-like protein 8 isoform X1 [Cucumis melo var. makuwa] >TYK15185.1 putative GEM-like protein 8 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105 Identity = 199/230 (86.52%), Postives = 211/230 (91.74%), Query Frame = 0
BLAST of CmoCh04G023400 vs. TAIR 10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 219.2 bits (557), Expect = 3.5e-57 Identity = 115/198 (58.08%), Postives = 145/198 (73.23%), Query Frame = 0
BLAST of CmoCh04G023400 vs. TAIR 10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 217.6 bits (553), Expect = 1.0e-56 Identity = 118/198 (59.60%), Postives = 138/198 (69.70%), Query Frame = 0
BLAST of CmoCh04G023400 vs. TAIR 10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 210.3 bits (534), Expect = 1.6e-54 Identity = 117/222 (52.70%), Postives = 144/222 (64.86%), Query Frame = 0
BLAST of CmoCh04G023400 vs. TAIR 10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 207.2 bits (526), Expect = 1.4e-53 Identity = 114/219 (52.05%), Postives = 144/219 (65.75%), Query Frame = 0
BLAST of CmoCh04G023400 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 137.1 bits (344), Expect = 1.8e-32 Identity = 77/221 (34.84%), Postives = 130/221 (58.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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